cmd.read_pdbstr("""\\nATOM 428 N GLY C 1 -7.148 16.892 14.379 1.00 55.28 N \ ATOM 429 CA GLY C 1 -7.724 16.925 13.011 1.00 57.52 C \ ATOM 430 C GLY C 1 -8.332 15.600 12.526 1.00 56.77 C \ ATOM 431 O GLY C 1 -9.401 15.167 12.994 1.00 57.98 O \ ATOM 432 N ILE C 2 -7.672 14.956 11.557 1.00 55.64 N \ ATOM 433 CA ILE C 2 -8.071 13.695 10.960 1.00 52.31 C \ ATOM 434 C ILE C 2 -7.388 12.552 11.737 1.00 53.60 C \ ATOM 435 O ILE C 2 -7.949 11.466 11.957 1.00 52.91 O \ ATOM 436 CB ILE C 2 -7.560 13.551 9.491 1.00 52.00 C \ ATOM 437 CG1 ILE C 2 -7.094 14.901 8.901 1.00 51.26 C \ ATOM 438 CG2 ILE C 2 -8.624 12.798 8.657 1.00 51.29 C \ ATOM 439 CD1 ILE C 2 -6.798 14.883 7.360 1.00 49.73 C \ ATOM 440 N VAL C 3 -6.152 12.934 12.055 1.00 51.92 N \ ATOM 441 CA VAL C 3 -5.260 12.069 12.823 1.00 52.22 C \ ATOM 442 C VAL C 3 -5.873 11.850 14.209 1.00 51.66 C \ ATOM 443 O VAL C 3 -6.012 10.666 14.652 1.00 52.22 O \ ATOM 444 CB VAL C 3 -3.822 12.645 12.781 1.00 52.75 C \ ATOM 445 CG1 VAL C 3 -2.794 11.779 13.506 1.00 51.56 C \ ATOM 446 CG2 VAL C 3 -3.361 12.913 11.367 1.00 51.60 C \ ATOM 447 N GLU C 4 -6.268 12.946 14.860 1.00 49.69 N \ ATOM 448 CA GLU C 4 -6.877 12.789 16.203 1.00 48.63 C \ ATOM 449 C GLU C 4 -8.186 12.042 16.067 1.00 45.85 C \ ATOM 450 O GLU C 4 -8.447 11.216 16.962 1.00 46.60 O \ ATOM 451 CB GLU C 4 -7.008 14.030 17.071 1.00 50.39 C \ ATOM 452 CG GLU C 4 -6.274 14.219 18.405 1.00 53.93 C \ ATOM 453 CD GLU C 4 -5.911 15.616 18.880 1.00 57.28 C \ ATOM 454 OE1 GLU C 4 -4.835 16.190 18.586 1.00 58.33 O \ ATOM 455 OE2 GLU C 4 -6.738 16.276 19.598 1.00 57.15 O \ ATOM 456 N GLN C 5 -8.961 12.247 15.029 1.00 44.80 N \ ATOM 457 CA GLN C 5 -10.264 11.586 14.802 1.00 43.99 C \ ATOM 458 C GLN C 5 -10.248 10.193 14.187 1.00 43.02 C \ ATOM 459 O GLN C 5 -11.002 9.321 14.720 1.00 44.05 O \ ATOM 460 CB GLN C 5 -11.206 12.529 14.011 1.00 43.75 C \ ATOM 461 CG GLN C 5 -12.541 11.927 13.661 1.00 44.23 C \ ATOM 462 CD GLN C 5 -13.499 12.614 12.717 1.00 44.70 C \ ATOM 463 OE1 GLN C 5 -14.633 12.980 13.064 1.00 45.99 O \ ATOM 464 NE2 GLN C 5 -13.274 12.856 11.431 1.00 41.90 N \ ATOM 465 N CYS C 6 -9.435 9.926 13.148 1.00 41.10 N \ ATOM 466 CA CYS C 6 -9.406 8.621 12.465 1.00 38.10 C \ ATOM 467 C CYS C 6 -8.296 7.634 12.731 1.00 37.89 C \ ATOM 468 O CYS C 6 -8.321 6.514 12.192 1.00 37.19 O \ ATOM 469 CB CYS C 6 -9.572 8.798 10.955 1.00 37.82 C \ ATOM 470 SG CYS C 6 -10.931 9.929 10.646 1.00 37.64 S \ ATOM 471 N CYS C 7 -7.412 7.973 13.626 1.00 38.95 N \ ATOM 472 CA CYS C 7 -6.339 7.101 14.098 1.00 40.55 C \ ATOM 473 C CYS C 7 -6.786 6.462 15.422 1.00 43.92 C \ ATOM 474 O CYS C 7 -6.432 5.309 15.758 1.00 48.21 O \ ATOM 475 CB CYS C 7 -5.006 7.812 14.166 1.00 37.34 C \ ATOM 476 SG CYS C 7 -4.438 8.320 12.512 1.00 34.49 S \ ATOM 477 N THR C 8 -7.600 7.117 16.198 1.00 48.65 N \ ATOM 478 CA THR C 8 -8.155 6.716 17.499 1.00 51.27 C \ ATOM 479 C THR C 8 -9.326 5.754 17.356 1.00 51.18 C \ ATOM 480 O THR C 8 -9.376 4.612 17.850 1.00 53.17 O \ ATOM 481 CB THR C 8 -8.609 8.003 18.326 1.00 51.66 C \ ATOM 482 OG1 THR C 8 -7.349 8.481 18.907 1.00 52.45 O \ ATOM 483 CG2 THR C 8 -9.676 7.711 19.394 1.00 52.05 C \ ATOM 484 N SER C 9 -10.268 6.324 16.639 1.00 50.27 N \ ATOM 485 CA SER C 9 -11.535 5.644 16.279 1.00 50.71 C \ ATOM 486 C SER C 9 -11.509 5.618 14.736 1.00 50.08 C \ ATOM 487 O SER C 9 -10.811 6.448 14.116 1.00 49.63 O \ ATOM 488 CB SER C 9 -12.738 6.280 16.902 1.00 49.40 C \ ATOM 489 OG SER C 9 -12.430 7.101 18.017 1.00 50.06 O \ ATOM 490 N ILE C 10 -12.224 4.652 14.190 1.00 49.19 N \ ATOM 491 CA ILE C 10 -12.252 4.496 12.740 1.00 46.12 C \ ATOM 492 C ILE C 10 -13.356 5.379 12.152 1.00 44.57 C \ ATOM 493 O ILE C 10 -14.413 5.644 12.705 1.00 46.98 O \ ATOM 494 CB ILE C 10 -12.352 3.046 12.195 1.00 45.50 C \ ATOM 495 CG1 ILE C 10 -13.811 2.763 11.756 1.00 44.95 C \ ATOM 496 CG2 ILE C 10 -11.814 2.012 13.199 1.00 45.57 C \ ATOM 497 CD1 ILE C 10 -13.942 1.784 10.550 1.00 44.33 C \ ATOM 498 N CYS C 11 -13.017 5.778 10.974 1.00 40.10 N \ ATOM 499 CA CYS C 11 -13.694 6.619 10.034 1.00 37.23 C \ ATOM 500 C CYS C 11 -14.067 5.852 8.776 1.00 35.83 C \ ATOM 501 O CYS C 11 -13.180 5.274 8.160 1.00 34.42 O \ ATOM 502 CB CYS C 11 -12.651 7.668 9.666 1.00 36.30 C \ ATOM 503 SG CYS C 11 -12.634 8.851 11.000 1.00 34.98 S \ ATOM 504 N SER C 12 -15.326 5.976 8.453 1.00 34.12 N \ ATOM 505 CA SER C 12 -15.973 5.348 7.309 1.00 31.89 C \ ATOM 506 C SER C 12 -15.706 6.261 6.136 1.00 30.46 C \ ATOM 507 O SER C 12 -15.063 7.275 6.391 1.00 32.90 O \ ATOM 508 CB SER C 12 -17.427 5.113 7.730 1.00 34.53 C \ ATOM 509 OG SER C 12 -17.974 6.317 8.282 1.00 34.19 O \ ATOM 510 N LEU C 13 -16.100 5.968 4.920 1.00 30.52 N \ ATOM 511 CA LEU C 13 -15.803 6.815 3.784 1.00 33.18 C \ ATOM 512 C LEU C 13 -16.562 8.139 3.889 1.00 34.42 C \ ATOM 513 O LEU C 13 -16.085 9.175 3.410 1.00 33.60 O \ ATOM 514 CB LEU C 13 -15.906 5.900 2.571 1.00 33.51 C \ ATOM 515 CG LEU C 13 -17.258 5.685 1.981 1.00 36.91 C \ ATOM 516 CD1 LEU C 13 -17.269 6.254 0.573 1.00 37.70 C \ ATOM 517 CD2 LEU C 13 -17.583 4.185 2.054 1.00 36.59 C \ ATOM 518 N TYR C 14 -17.714 8.069 4.544 1.00 34.57 N \ ATOM 519 CA TYR C 14 -18.672 9.093 4.868 1.00 34.09 C \ ATOM 520 C TYR C 14 -18.048 10.224 5.664 1.00 32.53 C \ ATOM 521 O TYR C 14 -18.308 11.385 5.322 1.00 33.56 O \ ATOM 522 CB TYR C 14 -19.942 8.498 5.545 1.00 34.58 C \ ATOM 523 CG TYR C 14 -20.576 7.546 4.540 1.00 36.53 C \ ATOM 524 CD1 TYR C 14 -21.008 8.022 3.295 1.00 36.92 C \ ATOM 525 CD2 TYR C 14 -20.669 6.180 4.795 1.00 37.52 C \ ATOM 526 CE1 TYR C 14 -21.559 7.168 2.330 1.00 36.70 C \ ATOM 527 CE2 TYR C 14 -21.223 5.292 3.865 1.00 36.87 C \ ATOM 528 CZ TYR C 14 -21.675 5.822 2.665 1.00 36.97 C \ ATOM 529 OH TYR C 14 -22.230 4.958 1.791 1.00 38.11 O \ ATOM 530 N GLN C 15 -17.274 9.915 6.644 1.00 33.42 N \ ATOM 531 CA GLN C 15 -16.541 10.842 7.508 1.00 34.34 C \ ATOM 532 C GLN C 15 -15.255 11.274 6.781 1.00 34.76 C \ ATOM 533 O GLN C 15 -14.818 12.416 7.027 1.00 35.07 O \ ATOM 534 CB GLN C 15 -16.141 10.229 8.814 1.00 36.30 C \ ATOM 535 CG GLN C 15 -17.126 10.319 9.958 1.00 40.38 C \ ATOM 536 CD GLN C 15 -16.679 9.338 11.010 1.00 42.56 C \ ATOM 537 OE1 GLN C 15 -17.216 8.238 11.020 1.00 44.98 O \ ATOM 538 NE2 GLN C 15 -15.692 9.689 11.825 1.00 44.33 N \ ATOM 539 N LEU C 16 -14.697 10.350 6.001 1.00 33.27 N \ ATOM 540 CA LEU C 16 -13.486 10.736 5.280 1.00 33.06 C \ ATOM 541 C LEU C 16 -13.829 11.881 4.323 1.00 34.59 C \ ATOM 542 O LEU C 16 -13.030 12.824 4.159 1.00 34.52 O \ ATOM 543 CB LEU C 16 -12.817 9.529 4.685 1.00 32.92 C \ ATOM 544 CG LEU C 16 -12.065 8.600 5.633 1.00 34.30 C \ ATOM 545 CD1 LEU C 16 -11.826 7.253 4.934 1.00 35.51 C \ ATOM 546 CD2 LEU C 16 -10.718 9.219 5.996 1.00 34.08 C \ ATOM 547 N GLU C 17 -14.958 11.869 3.702 1.00 35.71 N \ ATOM 548 CA GLU C 17 -15.532 12.800 2.737 1.00 36.74 C \ ATOM 549 C GLU C 17 -15.749 14.247 3.091 1.00 37.32 C \ ATOM 550 O GLU C 17 -16.067 15.032 2.201 1.00 37.89 O \ ATOM 551 CB GLU C 17 -16.946 12.277 2.503 1.00 37.27 C \ ATOM 552 CG GLU C 17 -17.720 12.678 1.239 1.00 38.54 C \ ATOM 553 CD GLU C 17 -18.942 11.789 1.202 1.00 37.16 C \ ATOM 554 OE1 GLU C 17 -19.701 11.913 2.126 1.00 36.79 O \ ATOM 555 OE2 GLU C 17 -19.032 10.968 0.289 1.00 37.96 O \ ATOM 556 N ASN C 18 -15.612 14.598 4.337 1.00 41.42 N \ ATOM 557 CA ASN C 18 -15.685 15.868 5.014 1.00 44.08 C \ ATOM 558 C ASN C 18 -14.251 16.434 5.012 1.00 44.54 C \ ATOM 559 O ASN C 18 -14.123 17.670 5.000 1.00 44.81 O \ ATOM 560 CB ASN C 18 -16.374 15.968 6.339 1.00 47.30 C \ ATOM 561 CG ASN C 18 -15.993 15.349 7.634 1.00 49.54 C \ ATOM 562 OD1 ASN C 18 -16.608 14.354 8.094 1.00 50.51 O \ ATOM 563 ND2 ASN C 18 -14.998 15.908 8.342 1.00 50.21 N \ ATOM 564 N TYR C 19 -13.261 15.562 4.894 1.00 43.80 N \ ATOM 565 CA TYR C 19 -11.869 16.000 4.779 1.00 42.14 C \ ATOM 566 C TYR C 19 -11.383 16.232 3.363 1.00 41.22 C \ ATOM 567 O TYR C 19 -10.181 16.462 3.108 1.00 42.57 O \ ATOM 568 CB TYR C 19 -10.971 15.036 5.551 1.00 43.39 C \ ATOM 569 CG TYR C 19 -11.270 15.017 7.048 1.00 43.53 C \ ATOM 570 CD1 TYR C 19 -10.977 16.145 7.825 1.00 44.44 C \ ATOM 571 CD2 TYR C 19 -11.779 13.899 7.684 1.00 43.28 C \ ATOM 572 CE1 TYR C 19 -11.189 16.160 9.217 1.00 45.09 C \ ATOM 573 CE2 TYR C 19 -12.005 13.882 9.050 1.00 44.65 C \ ATOM 574 CZ TYR C 19 -11.709 15.023 9.808 1.00 45.70 C \ ATOM 575 OH TYR C 19 -11.956 14.985 11.150 1.00 47.94 O \ ATOM 576 N CYS C 20 -12.238 16.212 2.393 1.00 39.44 N \ ATOM 577 CA CYS C 20 -11.978 16.433 0.966 1.00 38.83 C \ ATOM 578 C CYS C 20 -11.985 17.923 0.666 1.00 39.20 C \ ATOM 579 O CYS C 20 -12.104 18.669 1.629 1.00 37.85 O \ ATOM 580 CB CYS C 20 -13.083 15.737 0.149 1.00 37.94 C \ ATOM 581 SG CYS C 20 -13.142 13.928 0.126 1.00 36.00 S \ ATOM 582 N ASN C 21 -11.907 18.361 -0.579 1.00 41.43 N \ ATOM 583 CA ASN C 21 -11.995 19.795 -0.907 1.00 44.62 C \ ATOM 584 C ASN C 21 -13.423 20.069 -1.379 1.00 45.80 C \ ATOM 585 O ASN C 21 -13.797 19.618 -2.490 1.00 47.65 O \ ATOM 586 CB ASN C 21 -10.923 20.308 -1.869 1.00 45.33 C \ ATOM 587 CG ASN C 21 -9.694 20.789 -1.101 1.00 45.66 C \ ATOM 588 OD1 ASN C 21 -8.706 21.141 -1.762 1.00 46.94 O \ ATOM 589 ND2 ASN C 21 -9.722 20.822 0.227 1.00 45.46 N \ ATOM 590 OXT ASN C 21 -14.209 20.693 -0.657 1.00 47.91 O \ ATOM 612 N PHE D 1 -36.983 21.945 35.136 1.00 61.79 N \ ATOM 613 CA PHE D 1 -36.067 21.331 34.166 1.00 59.49 C \ ATOM 614 C PHE D 1 -36.515 21.675 32.740 1.00 58.82 C \ ATOM 615 O PHE D 1 -37.675 22.030 32.477 1.00 60.33 O \ ATOM 616 CB PHE D 1 -35.897 19.836 34.400 1.00 59.66 C \ ATOM 617 CG PHE D 1 -36.677 18.902 33.528 1.00 59.18 C \ ATOM 618 CD1 PHE D 1 -36.218 18.569 32.255 1.00 58.26 C \ ATOM 619 CD2 PHE D 1 -37.881 18.361 34.003 1.00 59.40 C \ ATOM 620 CE1 PHE D 1 -36.963 17.695 31.462 1.00 58.48 C \ ATOM 621 CE2 PHE D 1 -38.637 17.501 33.212 1.00 59.26 C \ ATOM 622 CZ PHE D 1 -38.178 17.155 31.942 1.00 58.95 C \ ATOM 623 N VAL D 2 -35.557 21.574 31.832 1.00 56.93 N \ ATOM 624 CA VAL D 2 -35.800 21.818 30.394 1.00 53.33 C \ ATOM 625 C VAL D 2 -35.449 20.426 29.819 1.00 51.63 C \ ATOM 626 O VAL D 2 -34.607 19.690 30.363 1.00 51.69 O \ ATOM 627 CB VAL D 2 -35.169 23.009 29.692 1.00 52.92 C \ ATOM 628 CG1 VAL D 2 -35.145 22.944 28.157 1.00 52.99 C \ ATOM 629 CG2 VAL D 2 -35.860 24.335 30.012 1.00 52.76 C \ ATOM 630 N ASN D 3 -36.249 20.146 28.800 1.00 48.42 N \ ATOM 631 CA ASN D 3 -36.086 18.860 28.112 1.00 44.29 C \ ATOM 632 C ASN D 3 -34.949 19.148 27.125 1.00 42.70 C \ ATOM 633 O ASN D 3 -35.106 19.921 26.181 1.00 42.65 O \ ATOM 634 CB ASN D 3 -37.405 18.335 27.624 1.00 43.91 C \ ATOM 635 CG ASN D 3 -37.339 16.923 27.112 1.00 43.12 C \ ATOM 636 OD1 ASN D 3 -36.450 16.743 26.288 1.00 44.25 O \ ATOM 637 ND2 ASN D 3 -38.129 15.918 27.428 1.00 44.50 N \ ATOM 638 N GLN D 4 -33.846 18.511 27.429 1.00 40.18 N \ ATOM 639 CA GLN D 4 -32.620 18.528 26.657 1.00 37.48 C \ ATOM 640 C GLN D 4 -32.835 17.971 25.253 1.00 35.79 C \ ATOM 641 O GLN D 4 -32.161 18.330 24.253 1.00 32.94 O \ ATOM 642 CB GLN D 4 -31.547 17.724 27.407 1.00 39.18 C \ ATOM 643 CG GLN D 4 -31.105 18.610 28.596 1.00 41.05 C \ ATOM 644 CD GLN D 4 -29.593 18.459 28.742 1.00 41.64 C \ ATOM 645 OE1 GLN D 4 -29.109 17.498 28.119 1.00 43.49 O \ ATOM 646 NE2 GLN D 4 -28.962 19.384 29.464 1.00 40.54 N \ ATOM 647 N HIS D 5 -33.776 17.048 25.171 1.00 33.25 N \ ATOM 648 CA HIS D 5 -34.127 16.359 23.917 1.00 30.37 C \ ATOM 649 C HIS D 5 -34.760 17.317 22.910 1.00 30.06 C \ ATOM 650 O HIS D 5 -34.331 17.469 21.750 1.00 30.73 O \ ATOM 651 CB HIS D 5 -35.011 15.141 24.283 1.00 30.51 C \ ATOM 652 CG HIS D 5 -35.375 14.454 23.013 1.00 32.05 C \ ATOM 653 ND1 HIS D 5 -34.412 14.024 22.124 1.00 33.38 N \ ATOM 654 CD2 HIS D 5 -36.563 14.206 22.456 1.00 32.97 C \ ATOM 655 CE1 HIS D 5 -35.022 13.524 21.058 1.00 34.58 C \ ATOM 656 NE2 HIS D 5 -36.320 13.617 21.239 1.00 34.76 N \ ATOM 657 N LEU D 6 -35.809 17.976 23.318 1.00 25.88 N \ ATOM 658 CA LEU D 6 -36.574 18.960 22.587 1.00 25.90 C \ ATOM 659 C LEU D 6 -35.722 20.207 22.339 1.00 25.43 C \ ATOM 660 O LEU D 6 -35.912 20.801 21.267 1.00 27.16 O \ ATOM 661 CB LEU D 6 -37.817 19.492 23.319 1.00 23.43 C \ ATOM 662 CG LEU D 6 -38.882 18.504 23.743 1.00 21.60 C \ ATOM 663 CD1 LEU D 6 -39.940 19.198 24.584 1.00 21.83 C \ ATOM 664 CD2 LEU D 6 -39.528 17.834 22.574 1.00 20.32 C \ ATOM 665 N CYS D 7 -34.949 20.596 23.293 1.00 26.55 N \ ATOM 666 CA CYS D 7 -34.075 21.785 23.151 1.00 27.70 C \ ATOM 667 C CYS D 7 -33.133 21.601 21.947 1.00 24.58 C \ ATOM 668 O CYS D 7 -32.902 22.435 21.049 1.00 25.02 O \ ATOM 669 CB CYS D 7 -33.305 22.103 24.433 1.00 28.84 C \ ATOM 670 SG CYS D 7 -32.055 23.409 24.205 1.00 31.65 S \ ATOM 671 N GLY D 8 -32.545 20.433 21.946 1.00 22.89 N \ ATOM 672 CA GLY D 8 -31.608 19.891 21.029 1.00 19.11 C \ ATOM 673 C GLY D 8 -32.060 19.930 19.579 1.00 19.48 C \ ATOM 674 O GLY D 8 -31.213 20.209 18.684 1.00 18.93 O \ ATOM 675 N SER D 9 -33.328 19.623 19.354 1.00 22.26 N \ ATOM 676 CA SER D 9 -33.907 19.637 18.007 1.00 21.74 C \ ATOM 677 C SER D 9 -34.006 21.072 17.522 1.00 22.84 C \ ATOM 678 O SER D 9 -34.015 21.280 16.309 1.00 23.25 O \ ATOM 679 CB SER D 9 -35.162 18.845 18.031 1.00 26.02 C \ ATOM 680 OG SER D 9 -36.271 19.709 18.300 1.00 30.53 O \ ATOM 681 N HIS D 10 -33.990 22.093 18.353 1.00 22.26 N \ ATOM 682 CA HIS D 10 -34.001 23.515 18.112 1.00 20.64 C \ ATOM 683 C HIS D 10 -32.622 23.936 17.694 1.00 20.43 C \ ATOM 684 O HIS D 10 -32.331 24.589 16.739 1.00 21.06 O \ ATOM 685 CB HIS D 10 -34.408 24.293 19.405 1.00 21.06 C \ ATOM 686 CG HIS D 10 -35.921 24.160 19.469 1.00 18.98 C \ ATOM 687 ND1 HIS D 10 -36.774 24.802 18.681 1.00 19.97 N \ ATOM 688 CD2 HIS D 10 -36.679 23.319 20.166 1.00 17.81 C \ ATOM 689 CE1 HIS D 10 -38.030 24.421 18.923 1.00 20.16 C \ ATOM 690 NE2 HIS D 10 -37.973 23.501 19.916 1.00 17.73 N \ ATOM 691 N LEU D 11 -31.702 23.494 18.504 1.00 22.54 N \ ATOM 692 CA LEU D 11 -30.251 23.658 18.420 1.00 22.11 C \ ATOM 693 C LEU D 11 -29.816 23.153 17.070 1.00 21.68 C \ ATOM 694 O LEU D 11 -29.278 23.906 16.280 1.00 25.35 O \ ATOM 695 CB LEU D 11 -29.859 22.979 19.722 1.00 21.64 C \ ATOM 696 CG LEU D 11 -29.215 23.764 20.803 1.00 22.03 C \ ATOM 697 CD1 LEU D 11 -28.502 22.857 21.812 1.00 20.19 C \ ATOM 698 CD2 LEU D 11 -28.131 24.635 20.151 1.00 23.39 C \ ATOM 699 N VAL D 12 -30.052 21.966 16.621 1.00 25.40 N \ ATOM 700 CA VAL D 12 -29.734 21.308 15.340 1.00 25.74 C \ ATOM 701 C VAL D 12 -30.076 22.159 14.134 1.00 26.83 C \ ATOM 702 O VAL D 12 -29.367 22.307 13.101 1.00 27.22 O \ ATOM 703 CB VAL D 12 -30.549 19.980 15.487 1.00 27.16 C \ ATOM 704 CG1 VAL D 12 -30.968 19.351 14.194 1.00 28.16 C \ ATOM 705 CG2 VAL D 12 -29.743 19.041 16.341 1.00 25.83 C \ ATOM 706 N GLU D 13 -31.261 22.750 14.265 1.00 24.71 N \ ATOM 707 CA GLU D 13 -31.918 23.666 13.375 1.00 23.41 C \ ATOM 708 C GLU D 13 -31.227 25.016 13.304 1.00 23.78 C \ ATOM 709 O GLU D 13 -31.079 25.600 12.220 1.00 25.00 O \ ATOM 710 CB GLU D 13 -33.348 23.932 13.758 1.00 23.87 C \ ATOM 711 CG GLU D 13 -34.380 22.859 13.380 1.00 29.95 C \ ATOM 712 CD GLU D 13 -35.772 23.460 13.611 1.00 34.92 C \ ATOM 713 OE1 GLU D 13 -36.274 23.673 14.728 1.00 34.71 O \ ATOM 714 OE2 GLU D 13 -36.213 23.767 12.461 1.00 36.47 O \ ATOM 715 N ALA D 14 -30.774 25.512 14.421 1.00 21.48 N \ ATOM 716 CA ALA D 14 -30.056 26.779 14.539 1.00 21.34 C \ ATOM 717 C ALA D 14 -28.653 26.527 13.975 1.00 23.94 C \ ATOM 718 O ALA D 14 -28.152 27.383 13.214 1.00 21.54 O \ ATOM 719 CB ALA D 14 -29.965 27.198 15.989 1.00 22.12 C \ ATOM 720 N LEU D 15 -28.055 25.404 14.433 1.00 23.43 N \ ATOM 721 CA LEU D 15 -26.740 25.065 13.857 1.00 23.17 C \ ATOM 722 C LEU D 15 -26.857 24.968 12.358 1.00 25.38 C \ ATOM 723 O LEU D 15 -25.985 25.412 11.631 1.00 27.73 O \ ATOM 724 CB LEU D 15 -26.284 23.781 14.516 1.00 22.80 C \ ATOM 725 CG LEU D 15 -25.417 23.942 15.753 1.00 21.69 C \ ATOM 726 CD1 LEU D 15 -26.046 24.899 16.702 1.00 22.50 C \ ATOM 727 CD2 LEU D 15 -25.464 22.609 16.499 1.00 22.84 C \ ATOM 728 N TYR D 16 -27.952 24.424 11.793 1.00 28.23 N \ ATOM 729 CA TYR D 16 -28.144 24.293 10.353 1.00 25.03 C \ ATOM 730 C TYR D 16 -28.144 25.668 9.682 1.00 25.86 C \ ATOM 731 O TYR D 16 -27.554 25.776 8.577 1.00 27.55 O \ ATOM 732 CB TYR D 16 -29.459 23.557 9.992 1.00 27.86 C \ ATOM 733 CG TYR D 16 -29.670 23.777 8.508 1.00 29.27 C \ ATOM 734 CD1 TYR D 16 -28.761 23.090 7.691 1.00 29.24 C \ ATOM 735 CD2 TYR D 16 -30.601 24.595 7.896 1.00 29.85 C \ ATOM 736 CE1 TYR D 16 -28.820 23.201 6.309 1.00 29.29 C \ ATOM 737 CE2 TYR D 16 -30.684 24.691 6.505 1.00 29.29 C \ ATOM 738 CZ TYR D 16 -29.771 23.994 5.751 1.00 29.60 C \ ATOM 739 OH TYR D 16 -29.775 24.029 4.369 1.00 34.80 O \ ATOM 740 N LEU D 17 -28.751 26.695 10.213 1.00 24.00 N \ ATOM 741 CA LEU D 17 -28.723 28.070 9.657 1.00 23.71 C \ ATOM 742 C LEU D 17 -27.421 28.806 9.871 1.00 23.91 C \ ATOM 743 O LEU D 17 -26.783 29.433 9.021 1.00 23.61 O \ ATOM 744 CB LEU D 17 -29.879 28.811 10.279 1.00 24.13 C \ ATOM 745 CG LEU D 17 -31.157 29.282 9.640 1.00 25.06 C \ ATOM 746 CD1 LEU D 17 -31.509 28.727 8.297 1.00 24.20 C \ ATOM 747 CD2 LEU D 17 -32.278 28.884 10.647 1.00 24.10 C \ ATOM 748 N VAL D 18 -26.885 28.819 11.044 1.00 26.38 N \ ATOM 749 CA VAL D 18 -25.636 29.441 11.470 1.00 28.07 C \ ATOM 750 C VAL D 18 -24.443 28.883 10.676 1.00 32.56 C \ ATOM 751 O VAL D 18 -23.664 29.504 9.903 1.00 30.16 O \ ATOM 752 CB VAL D 18 -25.604 29.342 13.011 1.00 27.38 C \ ATOM 753 CG1 VAL D 18 -24.220 29.575 13.569 1.00 26.78 C \ ATOM 754 CG2 VAL D 18 -26.583 30.367 13.595 1.00 27.52 C \ ATOM 755 N CYS D 19 -24.251 27.584 10.858 1.00 35.67 N \ ATOM 756 CA CYS D 19 -23.150 26.857 10.171 1.00 38.78 C \ ATOM 757 C CYS D 19 -23.501 26.756 8.691 1.00 42.52 C \ ATOM 758 O CYS D 19 -23.352 27.683 7.859 1.00 46.21 O \ ATOM 759 CB CYS D 19 -22.933 25.583 11.000 1.00 36.67 C \ ATOM 760 SG CYS D 19 -22.628 26.057 12.731 1.00 34.14 S \ ATOM 761 N GLY D 20 -24.007 25.585 8.326 1.00 46.53 N \ ATOM 762 CA GLY D 20 -24.478 25.152 7.039 1.00 47.24 C \ ATOM 763 C GLY D 20 -23.410 25.079 5.959 1.00 49.34 C \ ATOM 764 O GLY D 20 -23.263 24.021 5.316 1.00 47.72 O \ ATOM 765 N GLU D 21 -22.748 26.217 5.785 1.00 50.32 N \ ATOM 766 CA GLU D 21 -21.693 26.287 4.751 1.00 51.51 C \ ATOM 767 C GLU D 21 -20.337 25.765 5.229 1.00 50.16 C \ ATOM 768 O GLU D 21 -19.502 25.533 4.324 1.00 49.13 O \ ATOM 769 CB GLU D 21 -21.561 27.662 4.099 1.00 52.33 C \ ATOM 770 CG GLU D 21 -21.614 28.929 4.934 1.00 52.83 C \ ATOM 771 N ARG D 22 -20.135 25.597 6.533 1.00 46.54 N \ ATOM 772 CA ARG D 22 -18.839 25.091 7.022 1.00 45.62 C \ ATOM 773 C ARG D 22 -19.110 23.728 7.682 1.00 42.36 C \ ATOM 774 O ARG D 22 -18.251 22.853 7.874 1.00 41.61 O \ ATOM 775 CB ARG D 22 -18.025 25.995 7.931 1.00 46.71 C \ ATOM 776 CG ARG D 22 -18.191 27.495 7.847 1.00 47.86 C \ ATOM 777 CD ARG D 22 -17.968 28.210 9.146 1.00 50.33 C \ ATOM 778 NE ARG D 22 -19.079 29.144 9.302 1.00 54.07 N \ ATOM 779 CZ ARG D 22 -19.469 30.042 10.217 1.00 54.83 C \ ATOM 780 NH1 ARG D 22 -18.772 30.426 11.310 1.00 55.36 N \ ATOM 781 NH2 ARG D 22 -20.687 30.584 10.038 1.00 53.32 N \ ATOM 782 N GLY D 23 -20.375 23.568 8.024 1.00 40.70 N \ ATOM 783 CA GLY D 23 -20.813 22.306 8.616 1.00 35.44 C \ ATOM 784 C GLY D 23 -20.614 22.354 10.121 1.00 32.97 C \ ATOM 785 O GLY D 23 -20.216 23.342 10.752 1.00 35.08 O \ ATOM 786 N PHE D 24 -20.903 21.210 10.661 1.00 30.65 N \ ATOM 787 CA PHE D 24 -20.887 20.984 12.107 1.00 27.78 C \ ATOM 788 C PHE D 24 -21.109 19.512 12.395 1.00 28.62 C \ ATOM 789 O PHE D 24 -21.519 18.672 11.621 1.00 23.49 O \ ATOM 790 CB PHE D 24 -22.054 21.845 12.608 1.00 27.87 C \ ATOM 791 CG PHE D 24 -23.475 21.396 12.355 1.00 23.76 C \ ATOM 792 CD1 PHE D 24 -24.110 21.740 11.172 1.00 24.02 C \ ATOM 793 CD2 PHE D 24 -24.180 20.708 13.312 1.00 21.94 C \ ATOM 794 CE1 PHE D 24 -25.410 21.309 10.932 1.00 23.99 C \ ATOM 795 CE2 PHE D 24 -25.459 20.235 13.093 1.00 19.45 C \ ATOM 796 CZ PHE D 24 -26.077 20.559 11.899 1.00 22.17 C \ ATOM 797 N PHE D 25 -20.811 19.176 13.618 1.00 33.03 N \ ATOM 798 CA PHE D 25 -20.927 17.907 14.296 1.00 35.49 C \ ATOM 799 C PHE D 25 -21.873 18.048 15.481 1.00 34.80 C \ ATOM 800 O PHE D 25 -21.648 18.988 16.271 1.00 35.68 O \ ATOM 801 CB PHE D 25 -19.584 17.412 14.864 1.00 37.60 C \ ATOM 802 CG PHE D 25 -18.773 16.809 13.750 1.00 39.57 C \ ATOM 803 CD1 PHE D 25 -18.122 17.669 12.839 1.00 40.49 C \ ATOM 804 CD2 PHE D 25 -18.669 15.429 13.613 1.00 39.37 C \ ATOM 805 CE1 PHE D 25 -17.352 17.144 11.815 1.00 40.07 C \ ATOM 806 CE2 PHE D 25 -17.903 14.901 12.567 1.00 39.04 C \ ATOM 807 CZ PHE D 25 -17.258 15.761 11.685 1.00 39.58 C \ ATOM 808 N TYR D 26 -22.824 17.141 15.582 1.00 36.45 N \ ATOM 809 CA TYR D 26 -23.721 17.278 16.767 1.00 34.00 C \ ATOM 810 C TYR D 26 -23.237 16.186 17.726 1.00 38.38 C \ ATOM 811 O TYR D 26 -23.504 15.021 17.433 1.00 33.53 O \ ATOM 812 CB TYR D 26 -25.178 17.302 16.380 1.00 33.71 C \ ATOM 813 CG TYR D 26 -25.989 17.744 17.588 1.00 34.61 C \ ATOM 814 CD1 TYR D 26 -26.189 19.098 17.798 1.00 35.36 C \ ATOM 815 CD2 TYR D 26 -26.493 16.835 18.514 1.00 35.29 C \ ATOM 816 CE1 TYR D 26 -26.905 19.533 18.920 1.00 35.58 C \ ATOM 817 CE2 TYR D 26 -27.235 17.230 19.629 1.00 35.48 C \ ATOM 818 CZ TYR D 26 -27.410 18.595 19.815 1.00 35.46 C \ ATOM 819 OH TYR D 26 -28.057 19.068 20.889 1.00 35.75 O \ ATOM 820 N THR D 27 -22.519 16.582 18.780 1.00 42.11 N \ ATOM 821 CA THR D 27 -21.973 15.598 19.738 1.00 49.37 C \ ATOM 822 C THR D 27 -22.370 15.729 21.194 1.00 52.23 C \ ATOM 823 O THR D 27 -22.866 16.760 21.673 1.00 55.52 O \ ATOM 824 CB THR D 27 -20.380 15.669 19.700 1.00 48.56 C \ ATOM 825 N LYS D 28 -22.079 14.685 21.958 1.00 55.69 N \ ATOM 826 CA LYS D 28 -22.362 14.587 23.398 1.00 56.12 C \ ATOM 827 C LYS D 28 -21.245 13.892 24.164 1.00 52.90 C \ ATOM 828 O LYS D 28 -20.280 13.438 23.540 1.00 54.93 O \ ATOM 829 CB LYS D 28 -23.566 13.686 23.622 1.00 57.79 C \ ATOM 830 CG LYS D 28 -24.893 14.312 23.976 1.00 57.27 C \ ATOM 831 CD LYS D 28 -26.004 13.277 24.036 1.00 56.09 C \ ATOM 832 CE LYS D 28 -27.377 13.801 23.678 1.00 57.54 C \ ATOM 833 NZ LYS D 28 -28.172 14.216 24.866 1.00 57.57 N \ ATOM 834 N PRO D 29 -21.437 13.776 25.472 1.00 55.44 N \ ATOM 835 CA PRO D 29 -20.492 13.115 26.375 1.00 56.32 C \ ATOM 836 C PRO D 29 -19.918 11.843 25.771 1.00 58.03 C \ ATOM 837 O PRO D 29 -20.575 10.821 25.515 1.00 58.58 O \ ATOM 838 CB PRO D 29 -21.316 12.868 27.636 1.00 56.03 C \ ATOM 839 CG PRO D 29 -22.242 14.059 27.685 1.00 56.44 C \ ATOM 840 CD PRO D 29 -22.604 14.310 26.220 1.00 56.27 C \ ATOM 841 N THR D 30 -18.639 11.956 25.534 1.00 60.15 N \ ATOM 842 CA THR D 30 -17.689 10.998 24.971 1.00 61.76 C \ ATOM 843 C THR D 30 -17.558 11.263 23.470 1.00 63.54 C \ ATOM 844 O THR D 30 -17.315 10.296 22.699 1.00 65.13 O \ ATOM 845 CB THR D 30 -17.974 9.511 25.356 1.00 62.04 C \ ATOM 846 OXT THR D 30 -17.399 12.465 23.133 1.00 64.25 O \ """, "1lph.interface.16") cmd.set('ignore_case', '0') cmd.set('retain_order', '1') cmd.set('cartoon_smooth_loops', 0) cmd.set('transparency', 0.6) cmd.set('surface_color', 'grey80') cmd.hide('everything', 'all') cmd.color('grey80', 'all') cmd.select('dom', 'c. D & i. 1-30 | c. C & i. 1-21') cmd.show('cartoon', 'dom') cmd.spectrum('count', 'rainbow', 'dom') cmd.create('partner', 'c. D & i. 1-30 | c. C & i. 1-21') cmd.show('cartoon', 'partner') cmd.select('inter_resi', 'c. C & i. 5 | c. C & i. 18') cmd.color('purple', 'inter_resi') cmd.orient('dom | inter_resi') cmd.select('ptn_inter_resi', 'byres (!(n. C+O+H+CA+N)&dom within 4 of inter)') cmd.set_bond('stick_radius', 0.1, 'ptn_inter_resi') cmd.color('atomic','!e. C & inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('grey70','e. C & inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('atomic', '!e. C & ptn_inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('grey70', 'e. C & ptn_inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.show('sticks', 'ptn_inter_resi & !(n;C,O,H|(n. N&!r. pro))') cmd.show('sticks', 'inter_resi & !(n;C,O,H|(n. N&!r. pro))') cmd.show('surface', 'partner') cmd.deselect()