cmd.read_pdbstr("""\ HEADER COMPLEMENT FACTOR 13-DEC-93 1ERH \ TITLE THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE EXTRACELLULAR REGION OF \ TITLE 2 THE COMPLEMENT REGULATORY PROTEIN, CD59, A NEW CELL SURFACE PROTEIN \ TITLE 3 DOMAIN RELATED TO NEUROTOXINS \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: CD59; \ COMPND 3 CHAIN: A; \ COMPND 4 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 3 ORGANISM_COMMON: HUMAN; \ SOURCE 4 ORGANISM_TAXID: 9606 \ KEYWDS COMPLEMENT FACTOR \ EXPDTA SOLUTION NMR \ NUMMDL 10 \ MDLTYP CA ATOMS ONLY, CHAIN A \ AUTHOR B.KIEFFER,P.C.DRISCOLL,I.D.CAMPBELL,A.C.WILLIS,P.A.VAN DER MERWE, \ AUTHOR 2 S.J.DAVIS \ REVDAT 3 01-MAY-24 1ERH 1 REMARK \ REVDAT 2 24-FEB-09 1ERH 1 VERSN \ REVDAT 1 30-APR-94 1ERH 0 \ JRNL AUTH B.KIEFFER,P.C.DRISCOLL,I.D.CAMPBELL,A.C.WILLIS, \ JRNL AUTH 2 P.A.VAN DER MERWE,S.J.DAVIS \ JRNL TITL THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE EXTRACELLULAR \ JRNL TITL 2 REGION OF THE COMPLEMENT REGULATORY PROTEIN CD59, A NEW \ JRNL TITL 3 CELL-SURFACE PROTEIN DOMAIN RELATED TO SNAKE VENOM \ JRNL TITL 4 NEUROTOXINS. \ JRNL REF BIOCHEMISTRY V. 33 4471 1994 \ JRNL REFN ISSN 0006-2960 \ JRNL PMID 7512825 \ JRNL DOI 10.1021/BI00181A006 \ REMARK 2 \ REMARK 2 RESOLUTION. NOT APPLICABLE. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : X-PLOR \ REMARK 3 AUTHORS : BRUNGER \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: NULL \ REMARK 4 \ REMARK 4 1ERH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. \ REMARK 100 THE DEPOSITION ID IS D_1000173134. \ REMARK 210 \ REMARK 210 EXPERIMENTAL DETAILS \ REMARK 210 EXPERIMENT TYPE : NMR \ REMARK 210 TEMPERATURE (KELVIN) : NULL \ REMARK 210 PH : NULL \ REMARK 210 IONIC STRENGTH : NULL \ REMARK 210 PRESSURE : NULL \ REMARK 210 SAMPLE CONTENTS : NULL \ REMARK 210 \ REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL \ REMARK 210 SPECTROMETER FIELD STRENGTH : NULL \ REMARK 210 SPECTROMETER MODEL : NULL \ REMARK 210 SPECTROMETER MANUFACTURER : NULL \ REMARK 210 \ REMARK 210 STRUCTURE DETERMINATION. \ REMARK 210 SOFTWARE USED : NULL \ REMARK 210 METHOD USED : NULL \ REMARK 210 \ REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL \ REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 \ REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL \ REMARK 210 \ REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL \ REMARK 210 \ REMARK 210 REMARK: NULL \ REMARK 215 \ REMARK 215 NMR STUDY \ REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION \ REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT \ REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON \ REMARK 215 THESE RECORDS ARE MEANINGLESS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: PYB \ REMARK 800 EVIDENCE_CODE: UNKNOWN \ REMARK 800 SITE_DESCRIPTION: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1ERG RELATED DB: PDB \ DBREF 1ERH A 1 70 UNP P13987 CD59_HUMAN 26 95 \ SEQRES 1 A 70 LEU GLN CYS TYR ASN CYS PRO ASN PRO THR ALA ASP CYS \ SEQRES 2 A 70 LYS THR ALA VAL ASN CYS SER SER ASP PHE ASP ALA CYS \ SEQRES 3 A 70 LEU ILE THR LYS ALA GLY LEU GLN VAL TYR ASN LYS CYS \ SEQRES 4 A 70 TRP LYS PHE GLU HIS CYS ASN PHE ASN ASP VAL THR THR \ SEQRES 5 A 70 ARG LEU ARG GLU ASN GLU LEU THR TYR TYR CYS CYS LYS \ SEQRES 6 A 70 LYS ASP LEU CYS ASN \ HELIX 1 H1 PHE A 47 LEU A 54 11/5 NOT WELL-DEFINED BY NMR 8 \ SHEET 1 B1 2 CYS A 3 ASN A 5 0 \ SHEET 2 B1 2 THR A 15 VAL A 17 -1 \ SHEET 1 B2 3 TYR A 36 TRP A 40 0 \ SHEET 2 B2 3 ALA A 25 LYS A 30 -1 \ SHEET 3 B2 3 TYR A 62 CYS A 64 -1 \ SITE 1 PYB 3 THR A 29 PHE A 47 CYS A 69 \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ MODEL 1 \ ATOM 1 CA LEU A 1 42.065 -3.405 3.096 1.00 0.00 C \ ATOM 2 CA GLN A 2 43.505 -0.086 4.298 1.00 0.00 C \ ATOM 3 CA CYS A 3 47.020 1.405 4.659 1.00 0.00 C \ ATOM 4 CA TYR A 4 48.949 4.671 5.090 1.00 0.00 C \ ATOM 5 CA ASN A 5 49.295 6.389 1.690 1.00 0.00 C \ ATOM 6 CA CYS A 6 51.142 9.663 0.898 1.00 0.00 C \ ATOM 7 CA PRO A 7 53.602 7.827 -1.394 1.00 0.00 C \ ATOM 8 CA ASN A 8 55.684 11.018 -1.561 1.00 0.00 C \ ATOM 9 CA PRO A 9 58.721 11.614 0.650 1.00 0.00 C \ ATOM 10 CA THR A 10 56.869 12.879 3.736 1.00 0.00 C \ ATOM 11 CA ALA A 11 57.575 12.858 7.481 1.00 0.00 C \ ATOM 12 CA ASP A 12 54.030 13.912 8.463 1.00 0.00 C \ ATOM 13 CA CYS A 13 51.549 12.693 5.825 1.00 0.00 C \ ATOM 14 CA LYS A 14 50.063 9.244 5.134 1.00 0.00 C \ ATOM 15 CA THR A 15 46.304 9.232 5.860 1.00 0.00 C \ ATOM 16 CA ALA A 16 44.482 5.877 5.853 1.00 0.00 C \ ATOM 17 CA VAL A 17 42.964 4.643 2.575 1.00 0.00 C \ ATOM 18 CA ASN A 18 41.967 1.357 0.899 1.00 0.00 C \ ATOM 19 CA CYS A 19 44.315 -1.162 -0.790 1.00 0.00 C \ ATOM 20 CA SER A 20 42.169 -2.824 -3.499 1.00 0.00 C \ ATOM 21 CA SER A 21 40.366 -4.786 -0.787 1.00 0.00 C \ ATOM 22 CA ASP A 22 42.912 -7.320 -2.050 1.00 0.00 C \ ATOM 23 CA PHE A 23 46.272 -5.481 -2.169 1.00 0.00 C \ ATOM 24 CA ASP A 24 47.122 -6.649 1.351 1.00 0.00 C \ ATOM 25 CA ALA A 25 50.795 -6.219 0.821 1.00 0.00 C \ ATOM 26 CA CYS A 26 50.976 -3.022 2.744 1.00 0.00 C \ ATOM 27 CA LEU A 27 54.335 -1.617 1.717 1.00 0.00 C \ ATOM 28 CA ILE A 28 56.058 0.913 3.982 1.00 0.00 C \ ATOM 29 CA THR A 29 59.501 1.661 2.546 1.00 0.00 C \ ATOM 30 CA LYS A 30 62.096 3.587 4.537 1.00 0.00 C \ ATOM 31 CA ALA A 31 64.509 5.114 2.011 1.00 0.00 C \ ATOM 32 CA GLY A 32 66.973 7.959 2.661 1.00 0.00 C \ ATOM 33 CA LEU A 33 64.382 10.509 1.478 1.00 0.00 C \ ATOM 34 CA GLN A 34 61.609 9.239 3.748 1.00 0.00 C \ ATOM 35 CA VAL A 35 59.029 6.459 4.031 1.00 0.00 C \ ATOM 36 CA TYR A 36 57.463 5.568 0.660 1.00 0.00 C \ ATOM 37 CA ASN A 37 54.237 4.058 2.037 1.00 0.00 C \ ATOM 38 CA LYS A 38 51.759 2.732 -0.534 1.00 0.00 C \ ATOM 39 CA CYS A 39 49.334 -0.194 -0.920 1.00 0.00 C \ ATOM 40 CA TRP A 40 50.701 -3.308 -2.644 1.00 0.00 C \ ATOM 41 CA LYS A 41 49.122 -6.204 -4.486 1.00 0.00 C \ ATOM 42 CA PHE A 42 50.097 -9.191 -2.355 1.00 0.00 C \ ATOM 43 CA GLU A 43 52.049 -10.890 -5.189 1.00 0.00 C \ ATOM 44 CA HIS A 44 54.585 -8.006 -5.538 1.00 0.00 C \ ATOM 45 CA CYS A 45 56.419 -7.702 -2.196 1.00 0.00 C \ ATOM 46 CA ASN A 46 59.246 -10.084 -3.115 1.00 0.00 C \ ATOM 47 CA PHE A 47 62.545 -8.200 -2.998 1.00 0.00 C \ ATOM 48 CA ASN A 48 62.597 -4.711 -4.519 1.00 0.00 C \ ATOM 49 CA ASP A 49 59.296 -5.198 -6.399 1.00 0.00 C \ ATOM 50 CA VAL A 50 57.967 -3.191 -3.436 1.00 0.00 C \ ATOM 51 CA THR A 51 60.058 -0.056 -3.993 1.00 0.00 C \ ATOM 52 CA THR A 52 60.354 -0.875 -7.714 1.00 0.00 C \ ATOM 53 CA ARG A 53 57.455 1.407 -8.600 1.00 0.00 C \ ATOM 54 CA LEU A 54 58.777 3.657 -5.810 1.00 0.00 C \ ATOM 55 CA ARG A 55 62.438 3.727 -6.956 1.00 0.00 C \ ATOM 56 CA GLU A 56 64.781 2.324 -4.265 1.00 0.00 C \ ATOM 57 CA ASN A 57 67.011 -0.679 -3.450 1.00 0.00 C \ ATOM 58 CA GLU A 58 68.996 -0.248 -0.213 1.00 0.00 C \ ATOM 59 CA LEU A 59 65.854 0.931 1.549 1.00 0.00 C \ ATOM 60 CA THR A 60 64.084 -0.749 4.476 1.00 0.00 C \ ATOM 61 CA TYR A 61 60.453 -1.451 3.683 1.00 0.00 C \ ATOM 62 CA TYR A 62 58.090 -3.379 5.961 1.00 0.00 C \ ATOM 63 CA CYS A 63 55.363 -5.498 4.324 1.00 0.00 C \ ATOM 64 CA CYS A 64 52.066 -6.347 6.066 1.00 0.00 C \ ATOM 65 CA LYS A 65 49.484 -8.679 4.508 1.00 0.00 C \ ATOM 66 CA LYS A 66 46.216 -8.199 6.377 1.00 0.00 C \ ATOM 67 CA ASP A 67 45.283 -4.517 6.577 1.00 0.00 C \ ATOM 68 CA LEU A 68 46.877 -1.113 7.180 1.00 0.00 C \ ATOM 69 CA CYS A 69 48.289 -3.125 10.107 1.00 0.00 C \ ATOM 70 CA ASN A 70 48.905 0.167 11.924 1.00 0.00 C \ TER 71 ASN A 70 \ ENDMDL \ """, "1erhchainA") cmd.hide("all") cmd.color('grey70', "1erhchainA") cmd.show('cartoon', "1erhchainA") cmd.center("1erhchainA", state=0, origin=1) cmd.zoom("1erhchainA", animate=-1) cmd.select("e1erhA1", "c. A & i. 1-70") cmd.color("red", "e1erhA1") cmd.disable("e1erhA1")