cmd.read_pdbstr("""\ HEADER HORMONE 10-AUG-15 5D5E \ TITLE IN MESO IN SITU SERIAL X-RAY CRYSTALLOGRAPHY STRUCTURE OF INSULIN BY \ TITLE 2 SULFUR-SAD AT 100 K \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: INSULIN A CHAIN; \ COMPND 3 CHAIN: A; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: INSULIN B CHAIN; \ COMPND 6 CHAIN: B \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; \ SOURCE 3 ORGANISM_COMMON: PIG; \ SOURCE 4 ORGANISM_TAXID: 9823; \ SOURCE 5 MOL_ID: 2; \ SOURCE 6 ORGANISM_SCIENTIFIC: SUS SCROFA; \ SOURCE 7 ORGANISM_COMMON: PIG; \ SOURCE 8 ORGANISM_TAXID: 9823 \ KEYWDS HORMONE \ EXPDTA X-RAY DIFFRACTION \ AUTHOR C.-Y.HUANG,V.OLIERIC,R.WARSHAMANAGE,K.DIEDERICHS,M.WANG,M.CAFFREY \ REVDAT 3 20-NOV-24 5D5E 1 HETSYN \ REVDAT 2 02-MAR-16 5D5E 1 JRNL \ REVDAT 1 13-JAN-16 5D5E 0 \ JRNL AUTH C.Y.HUANG,V.OLIERIC,P.MA,N.HOWE,L.VOGELEY,X.LIU, \ JRNL AUTH 2 R.WARSHAMANAGE,T.WEINERT,E.PANEPUCCI,B.KOBILKA,K.DIEDERICHS, \ JRNL AUTH 3 M.WANG,M.CAFFREY \ JRNL TITL IN MESO IN SITU SERIAL X-RAY CRYSTALLOGRAPHY OF SOLUBLE AND \ JRNL TITL 2 MEMBRANE PROTEINS AT CRYOGENIC TEMPERATURES. \ JRNL REF ACTA CRYSTALLOGR D STRUCT V. 72 93 2016 \ JRNL REF 2 BIOL \ JRNL REFN ISSN 2059-7983 \ JRNL PMID 26894538 \ JRNL DOI 10.1107/S2059798315021683 \ REMARK 2 \ REMARK 2 RESOLUTION. 2.41 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : PHENIX 1.9_1690 \ REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN \ REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, \ REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, \ REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, \ REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, \ REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, \ REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT \ REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : ML \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.70 \ REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 \ REMARK 3 NUMBER OF REFLECTIONS : 6025 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 \ REMARK 3 R VALUE (WORKING SET) : 0.173 \ REMARK 3 FREE R VALUE : 0.220 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 \ REMARK 3 FREE R VALUE TEST SET COUNT : 313 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). \ REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE \ REMARK 3 1 27.7063 - 3.0317 1.00 2870 161 0.1488 0.2052 \ REMARK 3 2 3.0317 - 2.4068 1.00 2842 152 0.2298 0.2519 \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL \ REMARK 3 SOLVENT RADIUS : 1.11 \ REMARK 3 SHRINKAGE RADIUS : 0.90 \ REMARK 3 K_SOL : NULL \ REMARK 3 B_SOL : NULL \ REMARK 3 \ REMARK 3 ERROR ESTIMATES. \ REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 \ REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.690 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : NULL \ REMARK 3 B22 (A**2) : NULL \ REMARK 3 B33 (A**2) : NULL \ REMARK 3 B12 (A**2) : NULL \ REMARK 3 B13 (A**2) : NULL \ REMARK 3 B23 (A**2) : NULL \ REMARK 3 \ REMARK 3 TWINNING INFORMATION. \ REMARK 3 FRACTION: NULL \ REMARK 3 OPERATOR: NULL \ REMARK 3 \ REMARK 3 DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 RMSD COUNT \ REMARK 3 BOND : 0.002 446 \ REMARK 3 ANGLE : 0.514 602 \ REMARK 3 CHIRALITY : 0.024 66 \ REMARK 3 PLANARITY : 0.002 75 \ REMARK 3 DIHEDRAL : 12.312 156 \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 NCS DETAILS \ REMARK 3 NUMBER OF NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: NULL \ REMARK 4 \ REMARK 4 5D5E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-15. \ REMARK 100 THE DEPOSITION ID IS D_1000212666. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 18-FEB-15 \ REMARK 200 TEMPERATURE (KELVIN) : 100 \ REMARK 200 PH : PH 5.5-6.1 \ REMARK 200 NUMBER OF CRYSTALS USED : NULL \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : SLS \ REMARK 200 BEAMLINE : X06SA \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 2.06643 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : PIXEL \ REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS \ REMARK 200 DATA SCALING SOFTWARE : XSCALE \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6025 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 \ REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 \ REMARK 200 DATA REDUNDANCY : 16.00 \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 19.5000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 \ REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 \ REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : 2.000 \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD \ REMARK 200 SOFTWARE USED: SHELXDE \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 64.49 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1-0.2 M SODIUM PHOSPHATE, PH 5.5 \ REMARK 280 -6.1, AND 33-38 %(W/V) PEG400, LIPIDIC CUBIC PHASE, TEMPERATURE \ REMARK 280 293K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X+1/2,-Y,Z+1/2 \ REMARK 290 3555 -X,Y+1/2,-Z+1/2 \ REMARK 290 4555 X+1/2,-Y+1/2,-Z \ REMARK 290 5555 Z,X,Y \ REMARK 290 6555 Z+1/2,-X+1/2,-Y \ REMARK 290 7555 -Z+1/2,-X,Y+1/2 \ REMARK 290 8555 -Z,X+1/2,-Y+1/2 \ REMARK 290 9555 Y,Z,X \ REMARK 290 10555 -Y,Z+1/2,-X+1/2 \ REMARK 290 11555 Y+1/2,-Z+1/2,-X \ REMARK 290 12555 -Y+1/2,-Z,X+1/2 \ REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 \ REMARK 290 14555 -X,-Y+1/2,Z \ REMARK 290 15555 -X+1/2,Y,-Z \ REMARK 290 16555 X,-Y,-Z+1/2 \ REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 \ REMARK 290 18555 Z,-X,-Y+1/2 \ REMARK 290 19555 -Z,-X+1/2,Y \ REMARK 290 20555 -Z+1/2,X,-Y \ REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 \ REMARK 290 22555 -Y+1/2,Z,-X \ REMARK 290 23555 Y,-Z,-X+1/2 \ REMARK 290 24555 -Y,-Z+1/2,X \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 39.18000 \ REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 39.18000 \ REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 39.18000 \ REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 39.18000 \ REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 2050 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 3720 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 375 \ REMARK 375 SPECIAL POSITION \ REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS \ REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL \ REMARK 375 POSITIONS. \ REMARK 375 \ REMARK 375 ATOM RES CSSEQI \ REMARK 375 P PO4 B 102 LIES ON A SPECIAL POSITION. \ REMARK 375 O1 PO4 B 102 LIES ON A SPECIAL POSITION. \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 ASN B 3 59.26 -97.77 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 610 \ REMARK 610 MISSING HETEROATOM \ REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; \ REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; \ REMARK 610 I=INSERTION CODE): \ REMARK 610 M RES C SSEQI \ REMARK 610 PE5 B 103 \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: AC1 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 101 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC2 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 102 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC3 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue PE5 B 103 \ DBREF 5D5E A 1 21 UNP P01315 INS_PIG 88 108 \ DBREF 5D5E B 1 30 UNP P01315 INS_PIG 25 54 \ SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU \ SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN \ SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU \ SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR \ SEQRES 3 B 30 THR PRO LYS ALA \ HET PO4 B 101 5 \ HET PO4 B 102 5 \ HET PE5 B 103 11 \ HETNAM PO4 PHOSPHATE ION \ HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL \ HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- \ HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL; POLYETHYLENE \ HETSYN 3 PE5 GLYCOL PEG400 \ FORMUL 3 PO4 2(O4 P 3-) \ FORMUL 5 PE5 C18 H38 O9 \ FORMUL 6 HOH *31(H2 O) \ HELIX 1 AA1 GLY A 1 CYS A 7 1 7 \ HELIX 2 AA2 SER A 12 GLU A 17 1 6 \ HELIX 3 AA3 ASN A 18 CYS A 20 5 3 \ HELIX 4 AA4 GLY B 8 GLY B 20 1 13 \ HELIX 5 AA5 GLU B 21 GLY B 23 5 3 \ SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.03 \ SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.03 \ SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.03 \ SITE 1 AC1 9 TYR A 14 HOH A 103 PHE B 1 VAL B 2 \ SITE 2 AC1 9 ASN B 3 GLN B 4 PO4 B 102 HOH B 201 \ SITE 3 AC1 9 HOH B 208 \ SITE 1 AC2 2 PHE B 1 PO4 B 101 \ SITE 1 AC3 5 CYS A 7 GLU A 17 CYS B 7 CYS B 19 \ SITE 2 AC3 5 ARG B 22 \ CRYST1 78.360 78.360 78.360 90.00 90.00 90.00 I 21 3 24 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.012762 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.012762 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.012762 0.00000 \ ATOM 1 N GLY A 1 -7.091 -25.647 7.780 0.73 28.06 N \ ATOM 2 CA GLY A 1 -8.154 -25.375 6.829 0.73 37.96 C \ ATOM 3 C GLY A 1 -7.916 -24.108 6.031 0.73 27.94 C \ ATOM 4 O GLY A 1 -6.791 -23.616 5.957 0.73 35.41 O \ ATOM 5 N ILE A 2 -8.979 -23.571 5.440 0.85 33.81 N \ ATOM 6 CA ILE A 2 -8.869 -22.391 4.587 0.85 35.14 C \ ATOM 7 C ILE A 2 -8.558 -21.130 5.395 0.85 27.51 C \ ATOM 8 O ILE A 2 -7.895 -20.214 4.905 0.85 37.78 O \ ATOM 9 CB ILE A 2 -10.163 -22.175 3.759 0.85 32.56 C \ ATOM 10 CG1 ILE A 2 -9.959 -21.065 2.725 0.85 23.45 C \ ATOM 11 CG2 ILE A 2 -11.365 -21.892 4.664 0.85 29.55 C \ ATOM 12 CD1 ILE A 2 -11.134 -20.867 1.798 0.85 33.97 C \ ATOM 13 N VAL A 3 -9.028 -21.093 6.636 0.90 28.72 N \ ATOM 14 CA VAL A 3 -8.790 -19.953 7.510 0.90 38.35 C \ ATOM 15 C VAL A 3 -7.307 -19.848 7.851 0.90 41.88 C \ ATOM 16 O VAL A 3 -6.729 -18.761 7.859 0.90 36.78 O \ ATOM 17 CB VAL A 3 -9.619 -20.059 8.808 0.90 35.73 C \ ATOM 18 CG1 VAL A 3 -9.177 -19.014 9.824 0.90 21.25 C \ ATOM 19 CG2 VAL A 3 -11.105 -19.922 8.500 0.90 27.64 C \ ATOM 20 N GLU A 4 -6.691 -20.994 8.118 0.74 27.08 N \ ATOM 21 CA GLU A 4 -5.277 -21.035 8.462 1.00 44.34 C \ ATOM 22 C GLU A 4 -4.406 -20.640 7.274 0.95 43.67 C \ ATOM 23 O GLU A 4 -3.359 -20.016 7.445 0.84 36.51 O \ ATOM 24 CB GLU A 4 -4.881 -22.427 8.963 1.00 44.84 C \ ATOM 25 CG GLU A 4 -5.421 -22.789 10.342 1.00 58.73 C \ ATOM 26 CD GLU A 4 -6.928 -22.965 10.363 1.00 75.80 C \ ATOM 27 OE1 GLU A 4 -7.486 -23.457 9.358 1.00 41.72 O \ ATOM 28 OE2 GLU A 4 -7.554 -22.607 11.384 1.00 55.12 O1- \ ATOM 29 N GLN A 5 -4.850 -20.995 6.072 0.81 22.39 N \ ATOM 30 CA GLN A 5 -4.065 -20.761 4.867 0.81 22.65 C \ ATOM 31 C GLN A 5 -4.282 -19.377 4.260 0.81 36.64 C \ ATOM 32 O GLN A 5 -3.368 -18.813 3.657 0.81 35.19 O \ ATOM 33 CB GLN A 5 -4.383 -21.831 3.820 0.81 21.72 C \ ATOM 34 CG GLN A 5 -4.122 -23.261 4.280 0.81 41.66 C \ ATOM 35 CD GLN A 5 -2.710 -23.475 4.800 0.81 46.81 C \ ATOM 36 OE1 GLN A 5 -2.496 -24.215 5.761 0.81 40.70 O \ ATOM 37 NE2 GLN A 5 -1.738 -22.840 4.155 0.81 35.59 N \ ATOM 38 N CYS A 6 -5.481 -18.825 4.420 0.83 37.75 N \ ATOM 39 CA CYS A 6 -5.827 -17.589 3.725 0.83 26.65 C \ ATOM 40 C CYS A 6 -6.147 -16.408 4.641 0.83 28.28 C \ ATOM 41 O CYS A 6 -6.087 -15.259 4.206 0.83 25.88 O \ ATOM 42 CB CYS A 6 -7.008 -17.839 2.787 0.83 15.85 C \ ATOM 43 SG CYS A 6 -6.577 -18.822 1.334 0.83 26.74 S \ ATOM 44 N CYS A 7 -6.483 -16.678 5.899 0.83 28.91 N \ ATOM 45 CA CYS A 7 -6.819 -15.600 6.829 0.83 24.59 C \ ATOM 46 C CYS A 7 -5.650 -15.258 7.754 0.83 35.73 C \ ATOM 47 O CYS A 7 -5.191 -14.115 7.789 0.83 28.20 O \ ATOM 48 CB CYS A 7 -8.053 -15.967 7.657 0.83 34.04 C \ ATOM 49 SG CYS A 7 -8.489 -14.742 8.913 0.83 33.60 S \ ATOM 50 N THR A 8 -5.173 -16.248 8.504 0.90 31.55 N \ ATOM 51 CA ATHR A 8 -4.045 -16.074 9.415 0.59 41.39 C \ ATOM 52 CA BTHR A 8 -4.052 -16.021 9.409 0.41 41.34 C \ ATOM 53 C THR A 8 -2.742 -15.911 8.635 0.99 33.23 C \ ATOM 54 O THR A 8 -1.821 -15.216 9.064 0.83 43.27 O \ ATOM 55 CB ATHR A 8 -3.922 -17.270 10.385 0.59 39.82 C \ ATOM 56 CB BTHR A 8 -3.942 -17.129 10.469 0.41 39.89 C \ ATOM 57 OG1ATHR A 8 -5.180 -17.496 11.032 0.59 38.49 O \ ATOM 58 OG1BTHR A 8 -3.998 -18.412 9.834 0.41 42.51 O \ ATOM 59 CG2ATHR A 8 -2.859 -17.007 11.440 0.59 42.76 C \ ATOM 60 CG2BTHR A 8 -5.081 -17.012 11.471 0.41 41.59 C \ ATOM 61 N SER A 9 -2.669 -16.576 7.487 0.86 33.93 N \ ATOM 62 CA ASER A 9 -1.529 -16.436 6.589 0.50 42.96 C \ ATOM 63 CA BSER A 9 -1.528 -16.427 6.592 0.50 42.94 C \ ATOM 64 C SER A 9 -1.987 -15.855 5.255 0.73 33.95 C \ ATOM 65 O SER A 9 -3.183 -15.796 4.978 0.83 26.35 O \ ATOM 66 CB ASER A 9 -0.834 -17.783 6.375 0.50 41.49 C \ ATOM 67 CB BSER A 9 -0.818 -17.765 6.386 0.50 41.50 C \ ATOM 68 OG ASER A 9 -0.349 -18.310 7.598 0.50 50.14 O \ ATOM 69 OG BSER A 9 -1.679 -18.707 5.773 0.50 48.28 O \ ATOM 70 N ILE A 10 -1.036 -15.428 4.431 0.78 28.65 N \ ATOM 71 CA ILE A 10 -1.365 -14.841 3.134 0.78 29.30 C \ ATOM 72 C ILE A 10 -1.966 -15.873 2.180 0.78 28.65 C \ ATOM 73 O ILE A 10 -1.398 -16.944 1.960 0.78 32.98 O \ ATOM 74 CB ILE A 10 -0.127 -14.198 2.475 0.78 27.24 C \ ATOM 75 CG1 ILE A 10 0.428 -13.079 3.361 0.78 31.11 C \ ATOM 76 CG2 ILE A 10 -0.471 -13.656 1.096 0.78 20.58 C \ ATOM 77 CD1 ILE A 10 1.733 -12.496 2.856 0.78 23.18 C \ ATOM 78 N CYS A 11 -3.123 -15.535 1.617 0.81 23.63 N \ ATOM 79 CA CYS A 11 -3.846 -16.427 0.719 0.81 20.65 C \ ATOM 80 C CYS A 11 -3.191 -16.482 -0.656 0.81 29.82 C \ ATOM 81 O CYS A 11 -2.282 -15.708 -0.952 0.81 23.63 O \ ATOM 82 CB CYS A 11 -5.302 -15.976 0.586 0.81 30.16 C \ ATOM 83 SG CYS A 11 -6.439 -17.265 0.034 0.81 28.40 S \ ATOM 84 N SER A 12 -3.657 -17.402 -1.493 0.90 30.56 N \ ATOM 85 CA SER A 12 -3.144 -17.529 -2.851 0.90 34.23 C \ ATOM 86 C SER A 12 -4.218 -18.076 -3.779 0.90 22.08 C \ ATOM 87 O SER A 12 -5.181 -18.694 -3.326 0.90 30.26 O \ ATOM 88 CB SER A 12 -1.910 -18.433 -2.882 0.90 26.61 C \ ATOM 89 OG SER A 12 -2.252 -19.776 -2.589 0.90 35.80 O \ ATOM 90 N LEU A 13 -4.048 -17.846 -5.077 0.82 26.72 N \ ATOM 91 CA LEU A 13 -4.988 -18.353 -6.070 0.82 19.41 C \ ATOM 92 C LEU A 13 -4.986 -19.876 -6.076 0.82 25.87 C \ ATOM 93 O LEU A 13 -6.023 -20.506 -6.291 0.82 28.81 O \ ATOM 94 CB LEU A 13 -4.649 -17.820 -7.465 0.82 21.23 C \ ATOM 95 CG LEU A 13 -5.518 -18.345 -8.613 0.82 20.14 C \ ATOM 96 CD1 LEU A 13 -6.983 -17.993 -8.387 0.82 22.16 C \ ATOM 97 CD2 LEU A 13 -5.039 -17.801 -9.945 0.82 26.42 C \ ATOM 98 N TYR A 14 -3.815 -20.460 -5.835 0.80 25.61 N \ ATOM 99 CA TYR A 14 -3.671 -21.911 -5.788 0.80 28.80 C \ ATOM 100 C TYR A 14 -4.564 -22.515 -4.710 0.80 25.32 C \ ATOM 101 O TYR A 14 -5.308 -23.462 -4.967 0.80 33.15 O \ ATOM 102 CB TYR A 14 -2.208 -22.302 -5.539 0.80 25.86 C \ ATOM 103 CG TYR A 14 -1.961 -23.796 -5.583 0.80 29.72 C \ ATOM 104 CD1 TYR A 14 -1.463 -24.400 -6.728 0.80 22.59 C \ ATOM 105 CD2 TYR A 14 -2.225 -24.601 -4.479 0.80 21.67 C \ ATOM 106 CE1 TYR A 14 -1.241 -25.762 -6.777 0.80 30.95 C \ ATOM 107 CE2 TYR A 14 -2.008 -25.963 -4.519 0.80 23.57 C \ ATOM 108 CZ TYR A 14 -1.516 -26.537 -5.671 0.80 25.88 C \ ATOM 109 OH TYR A 14 -1.293 -27.893 -5.718 0.80 39.87 O \ ATOM 110 N GLN A 15 -4.481 -21.964 -3.504 0.79 23.23 N \ ATOM 111 CA GLN A 15 -5.223 -22.492 -2.366 0.79 30.85 C \ ATOM 112 C GLN A 15 -6.726 -22.250 -2.478 0.79 24.21 C \ ATOM 113 O GLN A 15 -7.525 -23.098 -2.083 0.79 31.83 O \ ATOM 114 CB GLN A 15 -4.698 -21.883 -1.066 0.79 26.10 C \ ATOM 115 CG GLN A 15 -3.388 -22.484 -0.592 0.79 36.87 C \ ATOM 116 CD GLN A 15 -3.519 -23.957 -0.258 0.79 51.11 C \ ATOM 117 OE1 GLN A 15 -4.455 -24.369 0.429 0.79 43.55 O \ ATOM 118 NE2 GLN A 15 -2.580 -24.760 -0.746 0.79 31.95 N \ ATOM 119 N LEU A 16 -7.108 -21.092 -3.007 0.85 25.39 N \ ATOM 120 CA LEU A 16 -8.521 -20.756 -3.159 0.85 30.07 C \ ATOM 121 C LEU A 16 -9.229 -21.731 -4.092 0.85 26.04 C \ ATOM 122 O LEU A 16 -10.374 -22.110 -3.850 0.85 27.68 O \ ATOM 123 CB LEU A 16 -8.691 -19.326 -3.679 0.85 25.49 C \ ATOM 124 CG LEU A 16 -8.506 -18.196 -2.665 0.85 26.21 C \ ATOM 125 CD1 LEU A 16 -8.518 -16.845 -3.356 0.85 26.76 C \ ATOM 126 CD2 LEU A 16 -9.580 -18.259 -1.587 0.85 22.93 C \ ATOM 127 N GLU A 17 -8.540 -22.143 -5.152 0.78 33.57 N \ ATOM 128 CA GLU A 17 -9.123 -23.048 -6.138 0.78 24.48 C \ ATOM 129 C GLU A 17 -9.256 -24.476 -5.609 0.78 29.02 C \ ATOM 130 O GLU A 17 -9.918 -25.312 -6.225 0.78 27.01 O \ ATOM 131 CB GLU A 17 -8.297 -23.038 -7.427 0.78 22.27 C \ ATOM 132 CG GLU A 17 -8.514 -21.796 -8.283 0.78 31.21 C \ ATOM 133 CD GLU A 17 -8.078 -21.987 -9.724 0.78 35.83 C \ ATOM 134 OE1 GLU A 17 -7.212 -22.849 -9.975 0.78 44.63 O \ ATOM 135 OE2 GLU A 17 -8.602 -21.272 -10.607 0.78 32.53 O1- \ ATOM 136 N ASN A 18 -8.635 -24.751 -4.466 0.79 25.14 N \ ATOM 137 CA ASN A 18 -8.782 -26.048 -3.812 0.79 22.89 C \ ATOM 138 C ASN A 18 -10.171 -26.221 -3.205 0.79 29.81 C \ ATOM 139 O ASN A 18 -10.546 -27.319 -2.795 0.79 26.13 O \ ATOM 140 CB ASN A 18 -7.722 -26.231 -2.721 0.79 32.18 C \ ATOM 141 CG ASN A 18 -6.380 -26.663 -3.275 0.79 34.02 C \ ATOM 142 OD1 ASN A 18 -6.303 -27.267 -4.344 0.79 29.42 O \ ATOM 143 ND2 ASN A 18 -5.313 -26.363 -2.543 0.79 20.19 N \ ATOM 144 N TYR A 19 -10.930 -25.131 -3.148 0.83 27.29 N \ ATOM 145 CA TYR A 19 -12.241 -25.155 -2.512 0.83 35.65 C \ ATOM 146 C TYR A 19 -13.370 -24.891 -3.501 0.83 26.69 C \ ATOM 147 O TYR A 19 -14.520 -24.706 -3.104 0.83 37.05 O \ ATOM 148 CB TYR A 19 -12.287 -24.140 -1.368 0.83 25.09 C \ ATOM 149 CG TYR A 19 -11.292 -24.447 -0.274 0.83 33.89 C \ ATOM 150 CD1 TYR A 19 -10.035 -23.856 -0.264 0.83 19.99 C \ ATOM 151 CD2 TYR A 19 -11.602 -25.346 0.737 0.83 25.50 C \ ATOM 152 CE1 TYR A 19 -9.119 -24.144 0.732 0.83 24.91 C \ ATOM 153 CE2 TYR A 19 -10.696 -25.640 1.734 0.83 21.74 C \ ATOM 154 CZ TYR A 19 -9.457 -25.038 1.729 0.83 31.27 C \ ATOM 155 OH TYR A 19 -8.558 -25.336 2.728 0.83 31.36 O \ ATOM 156 N CYS A 20 -13.040 -24.877 -4.789 0.83 26.01 N \ ATOM 157 CA CYS A 20 -14.058 -24.796 -5.828 0.83 24.62 C \ ATOM 158 C CYS A 20 -14.676 -26.173 -6.055 0.83 33.26 C \ ATOM 159 O CYS A 20 -14.023 -27.197 -5.850 0.83 32.00 O \ ATOM 160 CB CYS A 20 -13.467 -24.254 -7.133 0.83 25.55 C \ ATOM 161 SG CYS A 20 -12.787 -22.577 -7.025 0.83 35.17 S \ ATOM 162 N ASN A 21 -15.939 -26.195 -6.469 0.77 37.39 N \ ATOM 163 CA ASN A 21 -16.628 -27.450 -6.745 0.77 43.62 C \ ATOM 164 C ASN A 21 -16.178 -28.067 -8.065 0.77 51.53 C \ ATOM 165 O ASN A 21 -15.632 -27.386 -8.933 0.77 52.45 O \ ATOM 166 CB ASN A 21 -18.142 -27.238 -6.760 0.77 34.06 C \ ATOM 167 CG ASN A 21 -18.697 -26.903 -5.391 0.77 38.20 C \ ATOM 168 OD1 ASN A 21 -18.330 -27.520 -4.392 0.77 40.67 O \ ATOM 169 ND2 ASN A 21 -19.587 -25.919 -5.339 0.77 39.38 N \ ATOM 170 OXT ASN A 21 -16.351 -29.264 -8.295 0.77 71.64 O1- \ TER 171 ASN A 21 \ TER 416 ALA B 30 \ HETATM 438 O HOH A 101 -1.185 -21.207 2.400 0.95 52.18 O \ HETATM 439 O HOH A 102 -5.969 -25.172 2.326 0.88 48.84 O \ HETATM 440 O HOH A 103 -0.340 -28.840 -7.912 0.81 40.37 O \ HETATM 441 O HOH A 104 0.254 -15.767 -2.140 0.87 31.48 O \ HETATM 442 O HOH A 105 -1.543 -19.773 9.844 0.95 53.80 O \ HETATM 443 O HOH A 106 -10.282 -19.127 -11.347 0.55 27.67 O \ HETATM 444 O HOH A 107 -5.768 -20.066 12.056 0.98 49.08 O \ HETATM 445 O HOH A 108 -1.314 -19.546 0.147 0.92 41.66 O \ HETATM 446 O HOH A 109 -1.083 -19.250 -6.343 0.78 20.94 O \ HETATM 447 O HOH A 110 -19.448 -28.682 -1.528 1.00 54.72 O \ HETATM 448 O HOH A 111 -5.101 -11.417 9.683 0.94 45.20 O \ CONECT 43 83 \ CONECT 49 230 \ CONECT 83 43 \ CONECT 161 324 \ CONECT 230 49 \ CONECT 324 161 \ CONECT 417 418 419 420 421 \ CONECT 418 417 \ CONECT 419 417 \ CONECT 420 417 \ CONECT 421 417 \ CONECT 422 423 424 425 426 \ CONECT 423 422 \ CONECT 424 422 \ CONECT 425 422 \ CONECT 426 422 \ CONECT 427 428 \ CONECT 428 427 429 \ CONECT 429 428 430 \ CONECT 430 429 431 \ CONECT 431 430 432 \ CONECT 432 431 433 \ CONECT 433 432 434 \ CONECT 434 433 435 \ CONECT 435 434 436 \ CONECT 436 435 437 \ CONECT 437 436 \ MASTER 321 0 3 5 0 0 6 6 455 2 27 5 \ END \ """, "5d5echainA") cmd.hide("all") cmd.color('grey70', "5d5echainA") cmd.show('cartoon', "5d5echainA") cmd.center("5d5echainA", state=0, origin=1) cmd.zoom("5d5echainA", animate=-1) cmd.select("e5d5eA1", "c. A & i. 1-21") cmd.color("red", "e5d5eA1") cmd.disable("e5d5eA1")