cmd.read_pdbstr("""\ HEADER PROTEIN BINDING 09-FEB-18 6CDX \ TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF FLUOROPROPYLATED CYSTINE KNOT, \ TITLE 2 BINDING TO ALPHA-5 BETA-6 INTEGRIN \ CAVEAT 6CDX ILE B 3 HAS WRONG CHIRALITY AT ATOM CB \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: CYSTINE KNOT (FLUOROPROPYLATED); \ COMPND 3 CHAIN: A, B; \ COMPND 4 SYNONYM: TRYPSIN INHIBITOR 1, MCOTI-I, TRYPSIN INHIBITOR I; \ COMPND 5 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: MOMORDICA COCHINCHINENSIS; \ SOURCE 3 ORGANISM_COMMON: SPINY BITTER CUCUMBER; \ SOURCE 4 ORGANISM_TAXID: 3674; \ SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 \ KEYWDS CYSTEINE, DISULFIDES, ALPHA-5 BETA-6 INTEGRIN BINDING EPITOPE, CANCER \ KEYWDS 2 IMAGING, PROTEIN BINDING \ EXPDTA X-RAY DIFFRACTION \ AUTHOR R.KIMURA,J.NIX,C.BONGURA,S.CHAKRABORTI,S.GAMBHIR,F.V.FILIPP \ REVDAT 6 23-OCT-24 6CDX 1 REMARK \ REVDAT 5 04-OCT-23 6CDX 1 REMARK \ REVDAT 4 23-SEP-20 6CDX 1 REMARK \ REVDAT 3 26-FEB-20 6CDX 1 JRNL \ REVDAT 2 04-DEC-19 6CDX 1 REMARK \ REVDAT 1 14-AUG-19 6CDX 0 \ JRNL AUTH R.H.KIMURA,L.WANG,B.SHEN,L.HUO,W.TUMMERS,F.V.FILIPP,H.H.GUO, \ JRNL AUTH 2 T.HAYWOOD,L.ABOU-ELKACEM,L.BARATTO,F.HABTE,R.DEVULAPALLY, \ JRNL AUTH 3 T.H.WITNEY,Y.CHENG,S.TIKOLE,S.CHAKRABORTI,J.NIX, \ JRNL AUTH 4 C.A.BONAGURA,N.HATAMI,J.J.MOONEY,T.DESAI,S.TURNER, \ JRNL AUTH 5 R.S.GASTER,A.OTTE,B.C.VISSER,G.A.POULTSIDES,J.NORTON,W.PARK, \ JRNL AUTH 6 M.STOLOWITZ,K.LAU,E.YANG,A.NATARAJAN,O.ILOVICH,S.SRINIVAS, \ JRNL AUTH 7 A.SRINIVASAN,R.PAULMURUGAN,J.WILLMANN,F.T.CHIN,Z.CHENG, \ JRNL AUTH 8 A.IAGARU,F.LI,S.S.GAMBHIR \ JRNL TITL EVALUATION OF INTEGRIN ALPHA V BETA6CYSTINE KNOT PET TRACERS \ JRNL TITL 2 TO DETECT CANCER AND IDIOPATHIC PULMONARY FIBROSIS. \ JRNL REF NAT COMMUN V. 10 4673 2019 \ JRNL REFN ESSN 2041-1723 \ JRNL PMID 31611594 \ JRNL DOI 10.1038/S41467-019-11863-W \ REMARK 2 \ REMARK 2 RESOLUTION. 1.00 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.8.0123 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.82 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 \ REMARK 3 NUMBER OF REFLECTIONS : 25665 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 \ REMARK 3 R VALUE (WORKING SET) : 0.203 \ REMARK 3 FREE R VALUE : 0.226 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 1341 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : 20 \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.00 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.03 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 1388 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.88 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.3590 \ REMARK 3 BIN FREE R VALUE SET COUNT : 77 \ REMARK 3 BIN FREE R VALUE : 0.3640 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 529 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 52 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.15 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 0.00000 \ REMARK 3 B22 (A**2) : 0.01000 \ REMARK 3 B33 (A**2) : -0.01000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : 0.00000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.035 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.036 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.457 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 534 ; 0.032 ; 0.019 \ REMARK 3 BOND LENGTHS OTHERS (A): 494 ; 0.008 ; 0.020 \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 716 ; 3.366 ; 1.983 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): 1128 ; 1.703 ; 3.000 \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 70 ;11.462 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 24 ;18.835 ;20.000 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 86 ;11.798 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;24.686 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 74 ; 0.531 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 620 ; 0.016 ; 0.020 \ REMARK 3 GENERAL PLANES OTHERS (A): 134 ; 0.003 ; 0.020 \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING \ REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY \ REMARK 4 \ REMARK 4 6CDX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-18. \ REMARK 100 THE DEPOSITION ID IS D_1000232602. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 26-JUN-16 \ REMARK 200 TEMPERATURE (KELVIN) : 298 \ REMARK 200 PH : NULL \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : ALS \ REMARK 200 BEAMLINE : 4.2.2 \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 \ REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK SI(111) \ REMARK 200 SAGITTALLY FOCUSED \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CMOS \ REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS \ REMARK 200 DATA SCALING SOFTWARE : XDS \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27921 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 \ REMARK 200 RESOLUTION RANGE LOW (A) : 36.820 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 \ REMARK 200 DATA REDUNDANCY : 29.00 \ REMARK 200 R MERGE (I) : 0.03600 \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 32.3000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: PHASER \ REMARK 200 STARTING MODEL: PDB ENTRIES 2N8C & 2N8B \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 22.63 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.59 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: ISOPROPANOL, EVAPORATION, TEMPERATURE \ REMARK 280 298K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X+1/2,-Y,Z+1/2 \ REMARK 290 3555 -X,Y+1/2,-Z+1/2 \ REMARK 290 4555 X+1/2,-Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 8.47500 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.20500 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.12500 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.20500 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 8.47500 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.12500 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 4LT B 0 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 NH1 ARG B 18 O HOH B 103 0.06 \ REMARK 500 NH2 ARG B 18 O HOH B 102 0.13 \ REMARK 500 CZ ARG B 18 O HOH B 101 0.34 \ REMARK 500 O HOH B 120 O HOH B 128 0.92 \ REMARK 500 NE ARG B 18 O HOH B 101 1.01 \ REMARK 500 CZ ARG B 18 O HOH B 103 1.35 \ REMARK 500 CZ ARG B 18 O HOH B 102 1.46 \ REMARK 500 NH1 ARG B 18 O HOH B 101 1.49 \ REMARK 500 NH2 ARG B 18 O HOH B 101 1.51 \ REMARK 500 O HOH B 101 O HOH B 103 1.53 \ REMARK 500 O HOH B 101 O HOH B 102 1.61 \ REMARK 500 O HOH B 109 O HOH B 130 1.79 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC \ REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 \ REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A \ REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 \ REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE \ REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. \ REMARK 500 \ REMARK 500 DISTANCE CUTOFF: \ REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS \ REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE \ REMARK 500 O HOH A 107 O HOH B 112 2355 1.46 \ REMARK 500 O HOH B 108 O HOH B 115 1455 1.48 \ REMARK 500 O HOH B 115 O HOH B 128 1655 2.16 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 ASP A 22 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES \ REMARK 500 ARG A 30 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES \ REMARK 500 LEU B 14 CB - CG - CD2 ANGL. DEV. = 11.5 DEGREES \ REMARK 500 ARG B 18 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 PHE B 15 74.18 -101.84 \ REMARK 500 ALA B 26 16.96 51.54 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 2N8B RELATED DB: PDB \ REMARK 900 CYSTEINE KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 2N8C RELATED DB: PDB \ REMARK 900 CYSTEIN KNOT WITH 2FP INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 25844 RELATED DB: BMRB \ REMARK 900 CYSTEINE KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 25845 RELATED DB: BMRB \ REMARK 900 CYSTEIN KNOT WITH 2FP INTEGRIN AVB6 CANCER RECOGNITION SITE \ DBREF 6CDX A 0 15 PDB 6CDX 6CDX 0 15 \ DBREF 6CDX A 16 36 UNP P82408 ITR1_MOMCO 14 34 \ DBREF 6CDX B 0 15 PDB 6CDX 6CDX 0 15 \ DBREF 6CDX B 16 36 UNP P82408 ITR1_MOMCO 14 34 \ SEQRES 1 A 37 4LT GLY CYS ILE LEU ASN GLY ARG THR ASP LEU GLY THR \ SEQRES 2 A 37 LEU LEU PHE ARG CYS ARG ARG ASP SER ASP CYS PRO GLY \ SEQRES 3 A 37 ALA CYS ILE CYS ARG GLY ASN GLY TYR CYS GLY \ SEQRES 1 B 37 4LT GLY CYS ILE LEU ASN GLY ARG THR ASP LEU GLY THR \ SEQRES 2 B 37 LEU LEU PHE ARG CYS ARG ARG ASP SER ASP CYS PRO GLY \ SEQRES 3 B 37 ALA CYS ILE CYS ARG GLY ASN GLY TYR CYS GLY \ HET 4LT A 0 5 \ HETNAM 4LT (2R)-2-FLUOROPROPANOIC ACID \ FORMUL 1 4LT C3 H5 F O2 \ FORMUL 3 HOH *52(H2 O) \ HELIX 1 AA1 LEU A 10 PHE A 15 5 6 \ HELIX 2 AA2 ARG A 19 CYS A 23 5 5 \ HELIX 3 AA3 ASP B 9 PHE B 15 5 7 \ HELIX 4 AA4 ARG B 19 CYS B 23 5 5 \ SHEET 1 AA1 2 ILE A 28 CYS A 29 0 \ SHEET 2 AA1 2 CYS A 35 GLY A 36 -1 O GLY A 36 N ILE A 28 \ SHEET 1 AA2 2 ILE B 28 CYS B 29 0 \ SHEET 2 AA2 2 CYS B 35 GLY B 36 -1 O GLY B 36 N ILE B 28 \ SSBOND 1 CYS A 2 CYS A 27 1555 1555 2.06 \ SSBOND 2 CYS A 17 CYS A 29 1555 1555 2.03 \ SSBOND 3 CYS A 23 CYS A 35 1555 1555 2.05 \ SSBOND 4 CYS B 2 CYS B 27 1555 1555 2.03 \ SSBOND 5 CYS B 17 CYS B 29 1555 1555 2.07 \ SSBOND 6 CYS B 23 CYS B 35 1555 1555 2.04 \ LINK C 4LT A 0 N GLY A 1 1555 1555 1.34 \ CRYST1 16.950 44.250 66.410 90.00 90.00 90.00 P 21 21 21 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.058997 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.022599 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.015058 0.00000 \ HETATM 1 C 4LT A 0 -4.475 -1.796 26.590 1.00 20.00 C \ HETATM 2 O 4LT A 0 -5.585 -2.297 26.383 1.00 20.00 O \ HETATM 3 CA 4LT A 0 -3.673 -2.373 27.736 1.00 20.00 C \ HETATM 4 CB 4LT A 0 -3.308 -3.792 27.548 1.00 20.00 C \ HETATM 5 F 4LT A 0 -2.426 -1.656 27.853 1.00 20.00 F \ ATOM 6 N GLY A 1 -3.932 -0.789 25.902 1.00 5.57 N \ ATOM 7 CA GLY A 1 -4.639 -0.042 24.922 1.00 5.14 C \ ATOM 8 C GLY A 1 -4.456 -0.566 23.528 1.00 4.49 C \ ATOM 9 O GLY A 1 -3.828 -1.564 23.249 1.00 5.72 O \ ATOM 10 N CYS A 2 -5.009 0.177 22.578 1.00 4.73 N \ ATOM 11 CA CYS A 2 -4.967 -0.185 21.165 1.00 4.49 C \ ATOM 12 C CYS A 2 -5.092 1.111 20.393 1.00 4.78 C \ ATOM 13 O CYS A 2 -6.170 1.737 20.361 1.00 4.80 O \ ATOM 14 CB CYS A 2 -6.166 -1.066 20.831 1.00 4.61 C \ ATOM 15 SG CYS A 2 -6.398 -1.314 19.046 1.00 4.70 S \ ATOM 16 N ILE A 3 -4.014 1.457 19.682 1.00 4.85 N \ ATOM 17 CA ILE A 3 -3.970 2.719 18.958 1.00 5.95 C \ ATOM 18 C ILE A 3 -4.904 2.790 17.797 1.00 5.43 C \ ATOM 19 O ILE A 3 -5.081 3.866 17.189 1.00 7.83 O \ ATOM 20 CB ILE A 3 -2.519 3.022 18.482 1.00 7.28 C \ ATOM 21 CG1 ILE A 3 -2.028 2.031 17.405 1.00 9.01 C \ ATOM 22 CG2 ILE A 3 -1.525 3.184 19.618 1.00 9.78 C \ ATOM 23 CD1 ILE A 3 -0.641 2.266 16.772 1.00 12.17 C \ ATOM 24 N LEU A 4 -5.513 1.697 17.403 1.00 5.03 N \ ATOM 25 CA LEU A 4 -6.432 1.657 16.262 1.00 5.21 C \ ATOM 26 C LEU A 4 -7.871 1.886 16.641 1.00 5.69 C \ ATOM 27 O LEU A 4 -8.691 2.093 15.749 1.00 8.02 O \ ATOM 28 CB LEU A 4 -6.243 0.344 15.525 1.00 5.65 C \ ATOM 29 CG LEU A 4 -4.762 0.137 15.011 1.00 5.93 C \ ATOM 30 CD1 LEU A 4 -4.693 -1.248 14.413 1.00 6.14 C \ ATOM 31 CD2 LEU A 4 -4.406 1.218 13.994 1.00 6.27 C \ ATOM 32 N ASN A 5 -8.222 1.832 17.935 1.00 5.03 N \ ATOM 33 CA ASN A 5 -9.604 2.038 18.301 1.00 5.32 C \ ATOM 34 C ASN A 5 -9.964 3.492 18.141 1.00 5.61 C \ ATOM 35 O ASN A 5 -9.244 4.380 18.575 1.00 7.84 O \ ATOM 36 CB ASN A 5 -9.825 1.721 19.782 1.00 5.49 C \ ATOM 37 CG ASN A 5 -9.728 0.244 20.161 1.00 5.29 C \ ATOM 38 OD1 ASN A 5 -9.852 -0.655 19.322 1.00 6.77 O \ ATOM 39 ND2 ASN A 5 -9.587 0.007 21.455 1.00 5.26 N \ ATOM 40 N GLY A 6 -11.124 3.760 17.540 1.00 6.21 N \ ATOM 41 CA GLY A 6 -11.686 5.102 17.567 1.00 7.41 C \ ATOM 42 C GLY A 6 -11.144 6.067 16.551 1.00 7.77 C \ ATOM 43 O GLY A 6 -11.398 7.254 16.698 1.00 12.29 O \ ATOM 44 N ARG A 7 -10.480 5.655 15.508 1.00 7.45 N \ ATOM 45 CA ARG A 7 -9.917 6.548 14.548 1.00 8.02 C \ ATOM 46 C ARG A 7 -10.684 6.607 13.218 1.00 7.68 C \ ATOM 47 O ARG A 7 -11.316 5.614 12.854 1.00 9.76 O \ ATOM 48 CB ARG A 7 -8.456 6.302 14.309 1.00 10.79 C \ ATOM 49 CG ARG A 7 -8.109 5.023 13.791 1.00 11.60 C \ ATOM 50 CD ARG A 7 -6.688 4.678 14.118 1.00 9.89 C \ ATOM 51 NE ARG A 7 -5.730 5.526 13.454 1.00 10.21 N \ ATOM 52 CZ ARG A 7 -4.420 5.639 13.674 1.00 9.88 C \ ATOM 53 NH1 ARG A 7 -3.698 6.328 12.800 1.00 12.00 N \ ATOM 54 NH2 ARG A 7 -3.843 5.169 14.769 1.00 11.62 N \ ATOM 55 N THR A 8 -10.639 7.741 12.521 1.00 7.92 N \ ATOM 56 CA THR A 8 -11.301 7.871 11.221 1.00 9.00 C \ ATOM 57 C THR A 8 -10.353 7.993 10.046 1.00 7.59 C \ ATOM 58 O THR A 8 -10.861 8.417 8.971 1.00 7.87 O \ ATOM 59 CB THR A 8 -12.245 9.020 11.285 1.00 11.30 C \ ATOM 60 OG1 THR A 8 -11.542 10.201 11.712 1.00 10.71 O \ ATOM 61 CG2 THR A 8 -13.374 8.713 12.278 1.00 11.94 C \ ATOM 62 N ASP A 9 -9.106 7.683 10.200 1.00 8.57 N \ ATOM 63 CA ASP A 9 -8.194 7.529 9.082 1.00 8.53 C \ ATOM 64 C ASP A 9 -8.113 6.080 8.725 1.00 7.92 C \ ATOM 65 O ASP A 9 -8.949 5.244 9.139 1.00 8.00 O \ ATOM 66 CB ASP A 9 -6.849 8.170 9.426 1.00 9.03 C \ ATOM 67 CG ASP A 9 -6.111 7.445 10.499 1.00 8.56 C \ ATOM 68 OD1 ASP A 9 -6.646 6.409 11.037 1.00 7.67 O \ ATOM 69 OD2 ASP A 9 -5.034 7.861 10.874 1.00 11.37 O \ ATOM 70 N LEU A 10 -7.079 5.748 7.966 1.00 7.44 N \ ATOM 71 CA LEU A 10 -6.869 4.366 7.486 1.00 6.55 C \ ATOM 72 C LEU A 10 -5.687 3.743 8.248 1.00 6.48 C \ ATOM 73 O LEU A 10 -5.021 2.843 7.733 1.00 6.22 O \ ATOM 74 CB LEU A 10 -6.647 4.355 5.990 1.00 7.46 C \ ATOM 75 CG LEU A 10 -7.843 4.685 5.171 1.00 8.51 C \ ATOM 76 CD1 LEU A 10 -7.546 4.716 3.690 1.00 9.80 C \ ATOM 77 CD2 LEU A 10 -8.972 3.711 5.431 1.00 9.62 C \ ATOM 78 N GLY A 11 -5.451 4.131 9.491 1.00 6.79 N \ ATOM 79 CA GLY A 11 -4.452 3.519 10.307 1.00 6.87 C \ ATOM 80 C GLY A 11 -4.569 1.991 10.355 1.00 6.00 C \ ATOM 81 O GLY A 11 -3.543 1.304 10.416 1.00 6.70 O \ ATOM 82 N THR A 12 -5.793 1.493 10.416 1.00 5.76 N \ ATOM 83 CA THR A 12 -5.950 0.057 10.426 1.00 5.65 C \ ATOM 84 C THR A 12 -5.254 -0.640 9.251 1.00 5.46 C \ ATOM 85 O THR A 12 -4.719 -1.745 9.427 1.00 5.66 O \ ATOM 86 CB THR A 12 -7.403 -0.296 10.477 1.00 6.16 C \ ATOM 87 OG1 THR A 12 -7.623 -1.705 10.239 1.00 11.33 O \ ATOM 88 CG2 THR A 12 -8.141 0.285 9.388 1.00 5.71 C \ ATOM 89 N LEU A 13 -5.265 -0.031 8.112 1.00 5.51 N \ ATOM 90 CA LEU A 13 -4.683 -0.601 6.910 1.00 5.59 C \ ATOM 91 C LEU A 13 -3.159 -0.617 6.917 1.00 5.75 C \ ATOM 92 O LEU A 13 -2.538 -1.236 6.040 1.00 6.93 O \ ATOM 93 CB LEU A 13 -5.209 0.054 5.640 1.00 7.21 C \ ATOM 94 CG LEU A 13 -6.673 -0.063 5.421 1.00 9.28 C \ ATOM 95 CD1 LEU A 13 -7.085 0.490 4.065 1.00 10.98 C \ ATOM 96 CD2 LEU A 13 -7.128 -1.423 5.519 1.00 10.13 C \ ATOM 97 N LEU A 14 -2.508 0.024 7.890 1.00 6.07 N \ ATOM 98 CA LEU A 14 -1.087 -0.114 8.077 1.00 6.78 C \ ATOM 99 C LEU A 14 -0.736 -1.424 8.810 1.00 6.69 C \ ATOM 100 O LEU A 14 0.464 -1.789 8.842 1.00 8.70 O \ ATOM 101 CB LEU A 14 -0.535 1.032 8.922 1.00 7.08 C \ ATOM 102 CG LEU A 14 -0.629 2.410 8.321 1.00 8.61 C \ ATOM 103 CD1 LEU A 14 -0.349 3.481 9.371 1.00 11.25 C \ ATOM 104 CD2 LEU A 14 0.211 2.489 7.022 1.00 10.14 C \ ATOM 105 N PHE A 15 -1.753 -2.137 9.385 1.00 5.42 N \ ATOM 106 CA PHE A 15 -1.507 -3.280 10.221 1.00 5.16 C \ ATOM 107 C PHE A 15 -2.209 -4.500 9.709 1.00 4.79 C \ ATOM 108 O PHE A 15 -3.273 -4.901 10.141 1.00 5.11 O \ ATOM 109 CB PHE A 15 -1.898 -2.949 11.653 1.00 5.25 C \ ATOM 110 CG PHE A 15 -1.030 -1.912 12.259 1.00 5.64 C \ ATOM 111 CD1 PHE A 15 0.182 -2.235 12.792 1.00 6.07 C \ ATOM 112 CD2 PHE A 15 -1.447 -0.596 12.330 1.00 6.39 C \ ATOM 113 CE1 PHE A 15 0.947 -1.239 13.369 1.00 7.67 C \ ATOM 114 CE2 PHE A 15 -0.622 0.366 12.909 1.00 7.07 C \ ATOM 115 CZ PHE A 15 0.567 0.038 13.393 1.00 7.87 C \ ATOM 116 N ARG A 16 -1.600 -5.088 8.693 1.00 5.17 N \ ATOM 117 CA ARG A 16 -2.095 -6.371 8.143 1.00 5.92 C \ ATOM 118 C ARG A 16 -1.914 -7.454 9.169 1.00 5.34 C \ ATOM 119 O ARG A 16 -0.873 -7.526 9.844 1.00 5.95 O \ ATOM 120 CB ARG A 16 -1.292 -6.694 6.908 1.00 6.38 C \ ATOM 121 CG ARG A 16 -1.696 -8.002 6.178 1.00 6.63 C \ ATOM 122 CD ARG A 16 -2.925 -7.861 5.361 1.00 6.53 C \ ATOM 123 NE ARG A 16 -3.235 -9.075 4.605 1.00 7.08 N \ ATOM 124 CZ ARG A 16 -3.709 -10.205 5.161 1.00 5.89 C \ ATOM 125 NH1 ARG A 16 -4.203 -10.238 6.382 1.00 5.67 N \ ATOM 126 NH2 ARG A 16 -3.710 -11.333 4.450 1.00 6.85 N \ ATOM 127 N CYS A 17 -2.884 -8.322 9.318 1.00 4.82 N \ ATOM 128 CA CYS A 17 -2.793 -9.371 10.310 1.00 4.61 C \ ATOM 129 C CYS A 17 -3.469 -10.634 9.789 1.00 4.29 C \ ATOM 130 O CYS A 17 -4.518 -10.637 9.158 1.00 4.65 O \ ATOM 131 CB CYS A 17 -3.420 -8.940 11.638 1.00 5.12 C \ ATOM 132 SG CYS A 17 -5.161 -8.459 11.511 1.00 4.93 S \ ATOM 133 N ARG A 18 -2.815 -11.726 10.219 1.00 4.88 N \ ATOM 134 CA ARG A 18 -3.363 -13.058 9.967 1.00 5.56 C \ ATOM 135 C ARG A 18 -3.811 -13.707 11.285 1.00 5.43 C \ ATOM 136 O ARG A 18 -4.434 -14.774 11.295 1.00 5.73 O \ ATOM 137 CB ARG A 18 -2.365 -13.978 9.276 1.00 6.26 C \ ATOM 138 CG ARG A 18 -2.140 -13.510 7.857 1.00 7.75 C \ ATOM 139 CD ARG A 18 -0.954 -14.129 7.202 1.00 11.75 C \ ATOM 140 NE ARG A 18 -0.972 -13.889 5.756 1.00 20.84 N \ ATOM 141 CZ ARG A 18 -0.585 -12.835 5.204 1.00 24.98 C \ ATOM 142 NH1 ARG A 18 -0.624 -12.667 3.890 1.00 15.99 N \ ATOM 143 NH2 ARG A 18 -0.102 -11.880 5.865 1.00 29.75 N \ ATOM 144 N ARG A 19 -3.525 -13.005 12.401 1.00 5.25 N \ ATOM 145 CA ARG A 19 -3.769 -13.532 13.754 1.00 5.50 C \ ATOM 146 C ARG A 19 -3.595 -12.329 14.668 1.00 6.08 C \ ATOM 147 O ARG A 19 -2.958 -11.355 14.293 1.00 5.62 O \ ATOM 148 CB ARG A 19 -2.765 -14.677 14.056 1.00 6.20 C \ ATOM 149 CG ARG A 19 -1.315 -14.252 13.985 1.00 7.43 C \ ATOM 150 CD ARG A 19 -0.393 -15.449 13.815 1.00 9.04 C \ ATOM 151 NE ARG A 19 -0.601 -16.171 12.548 1.00 17.60 N \ ATOM 152 CZ ARG A 19 0.096 -15.913 11.443 1.00 12.19 C \ ATOM 153 NH1 ARG A 19 -0.174 -16.557 10.327 1.00 11.43 N \ ATOM 154 NH2 ARG A 19 1.088 -14.965 11.491 1.00 25.60 N \ ATOM 155 N ASP A 20 -4.114 -12.413 15.889 1.00 6.36 N \ ATOM 156 CA ASP A 20 -4.118 -11.289 16.793 1.00 7.04 C \ ATOM 157 C ASP A 20 -2.781 -10.889 17.124 1.00 8.06 C \ ATOM 158 O ASP A 20 -2.488 -9.666 17.327 1.00 7.72 O \ ATOM 159 CB ASP A 20 -4.929 -11.613 18.085 1.00 7.11 C \ ATOM 160 CG ASP A 20 -6.374 -11.696 17.938 1.00 8.43 C \ ATOM 161 OD1 ASP A 20 -6.920 -11.214 16.943 1.00 8.20 O \ ATOM 162 OD2 ASP A 20 -7.015 -12.250 18.872 1.00 11.07 O \ ATOM 163 N SER A 21 -1.824 -11.808 17.217 1.00 8.87 N \ ATOM 164 CA SER A 21 -0.475 -11.498 17.640 1.00 10.37 C \ ATOM 165 C SER A 21 0.334 -10.678 16.580 1.00 9.42 C \ ATOM 166 O SER A 21 1.330 -10.078 16.947 1.00 10.77 O \ ATOM 167 CB SER A 21 0.212 -12.791 18.065 1.00 12.22 C \ ATOM 168 OG SER A 21 0.472 -13.642 16.900 1.00 13.58 O \ ATOM 169 N ASP A 22 -0.182 -10.546 15.348 1.00 7.93 N \ ATOM 170 CA ASP A 22 0.354 -9.596 14.374 1.00 7.38 C \ ATOM 171 C ASP A 22 0.057 -8.107 14.701 1.00 7.02 C \ ATOM 172 O ASP A 22 0.574 -7.253 14.027 1.00 8.14 O \ ATOM 173 CB ASP A 22 -0.235 -9.887 13.007 1.00 7.88 C \ ATOM 174 CG ASP A 22 0.261 -11.230 12.420 1.00 9.15 C \ ATOM 175 OD1 ASP A 22 1.061 -12.026 13.019 1.00 14.52 O \ ATOM 176 OD2 ASP A 22 -0.315 -11.623 11.391 1.00 8.17 O \ ATOM 177 N CYS A 23 -0.835 -7.863 15.647 1.00 6.00 N \ ATOM 178 CA CYS A 23 -1.337 -6.520 15.880 1.00 5.52 C \ ATOM 179 C CYS A 23 -0.569 -5.741 16.965 1.00 6.15 C \ ATOM 180 O CYS A 23 0.088 -6.347 17.792 1.00 6.93 O \ ATOM 181 CB CYS A 23 -2.839 -6.627 16.233 1.00 5.40 C \ ATOM 182 SG CYS A 23 -3.816 -7.254 14.857 1.00 5.16 S \ ATOM 183 N PRO A 24 -0.662 -4.415 16.944 1.00 6.02 N \ ATOM 184 CA PRO A 24 0.071 -3.612 17.908 1.00 6.11 C \ ATOM 185 C PRO A 24 -0.700 -3.501 19.201 1.00 5.39 C \ ATOM 186 O PRO A 24 -1.971 -3.445 19.256 1.00 5.62 O \ ATOM 187 CB PRO A 24 0.179 -2.256 17.233 1.00 6.65 C \ ATOM 188 CG PRO A 24 -1.082 -2.198 16.344 1.00 6.53 C \ ATOM 189 CD PRO A 24 -1.189 -3.616 15.845 1.00 6.08 C \ ATOM 190 N GLY A 25 0.026 -3.385 20.282 1.00 5.31 N \ ATOM 191 CA GLY A 25 -0.588 -3.225 21.619 1.00 5.95 C \ ATOM 192 C GLY A 25 -1.513 -4.364 21.991 1.00 5.77 C \ ATOM 193 O GLY A 25 -1.166 -5.531 21.788 1.00 6.60 O \ ATOM 194 N ALA A 26 -2.741 -4.046 22.397 1.00 5.36 N \ ATOM 195 CA ALA A 26 -3.779 -5.032 22.635 1.00 5.61 C \ ATOM 196 C ALA A 26 -4.816 -5.023 21.511 1.00 4.57 C \ ATOM 197 O ALA A 26 -5.952 -5.501 21.697 1.00 4.65 O \ ATOM 198 CB ALA A 26 -4.387 -4.839 23.986 1.00 6.33 C \ ATOM 199 N CYS A 27 -4.485 -4.443 20.377 1.00 4.47 N \ ATOM 200 CA CYS A 27 -5.352 -4.540 19.172 1.00 4.14 C \ ATOM 201 C CYS A 27 -5.559 -5.968 18.786 1.00 4.67 C \ ATOM 202 O CYS A 27 -4.701 -6.849 19.114 1.00 5.69 O \ ATOM 203 CB CYS A 27 -4.800 -3.731 18.039 1.00 4.34 C \ ATOM 204 SG CYS A 27 -4.558 -1.956 18.372 1.00 4.56 S \ ATOM 205 N ILE A 28 -6.640 -6.253 18.057 1.00 4.50 N \ ATOM 206 CA ILE A 28 -6.964 -7.622 17.618 1.00 4.70 C \ ATOM 207 C ILE A 28 -7.166 -7.619 16.092 1.00 4.41 C \ ATOM 208 O ILE A 28 -7.401 -6.591 15.467 1.00 5.07 O \ ATOM 209 CB ILE A 28 -8.133 -8.185 18.393 1.00 6.54 C \ ATOM 210 CG1 ILE A 28 -9.392 -7.388 18.198 1.00 7.65 C \ ATOM 211 CG2 ILE A 28 -7.759 -8.322 19.824 1.00 8.00 C \ ATOM 212 CD1 ILE A 28 -10.564 -8.094 18.851 1.00 9.23 C \ ATOM 213 N CYS A 29 -7.086 -8.802 15.523 1.00 4.41 N \ ATOM 214 CA CYS A 29 -7.177 -8.948 14.083 1.00 5.18 C \ ATOM 215 C CYS A 29 -8.660 -8.952 13.735 1.00 6.66 C \ ATOM 216 O CYS A 29 -9.526 -9.534 14.476 1.00 10.88 O \ ATOM 217 CB CYS A 29 -6.345 -10.127 13.618 1.00 5.50 C \ ATOM 218 SG CYS A 29 -6.146 -10.202 11.840 1.00 5.76 S \ ATOM 219 N ARG A 30 -9.081 -8.150 12.745 1.00 6.29 N \ ATOM 220 CA ARG A 30 -10.499 -8.092 12.421 1.00 8.23 C \ ATOM 221 C ARG A 30 -10.724 -8.883 11.133 1.00 9.40 C \ ATOM 222 O ARG A 30 -9.842 -9.344 10.444 1.00 8.92 O \ ATOM 223 CB ARG A 30 -10.956 -6.633 12.345 1.00 10.29 C \ ATOM 224 CG ARG A 30 -10.580 -5.809 13.587 1.00 19.23 C \ ATOM 225 CD ARG A 30 -10.880 -6.417 14.910 1.00 25.51 C \ ATOM 226 NE ARG A 30 -12.254 -6.424 15.322 1.00 26.61 N \ ATOM 227 CZ ARG A 30 -12.841 -7.500 15.889 1.00 26.55 C \ ATOM 228 NH1 ARG A 30 -14.094 -7.392 16.332 1.00 30.06 N \ ATOM 229 NH2 ARG A 30 -12.287 -8.680 15.948 1.00 13.46 N \ ATOM 230 N GLY A 31 -12.040 -8.948 10.807 1.00 11.95 N \ ATOM 231 CA GLY A 31 -12.576 -9.717 9.748 1.00 13.06 C \ ATOM 232 C GLY A 31 -12.042 -9.392 8.363 1.00 11.01 C \ ATOM 233 O GLY A 31 -12.102 -10.146 7.488 1.00 14.97 O \ ATOM 234 N ASN A 32 -11.521 -8.210 8.161 1.00 9.73 N \ ATOM 235 CA ASN A 32 -10.932 -7.823 6.905 1.00 8.99 C \ ATOM 236 C ASN A 32 -9.379 -8.150 6.754 1.00 8.84 C \ ATOM 237 O ASN A 32 -8.766 -7.811 5.770 1.00 9.19 O \ ATOM 238 CB ASN A 32 -11.172 -6.342 6.607 1.00 9.66 C \ ATOM 239 CG ASN A 32 -10.643 -5.451 7.663 1.00 9.49 C \ ATOM 240 OD1 ASN A 32 -9.988 -5.847 8.678 1.00 8.90 O \ ATOM 241 ND2 ASN A 32 -10.794 -4.175 7.391 1.00 9.81 N \ ATOM 242 N GLY A 33 -8.767 -8.803 7.741 1.00 6.84 N \ ATOM 243 CA GLY A 33 -7.316 -9.064 7.736 1.00 6.63 C \ ATOM 244 C GLY A 33 -6.472 -7.887 8.099 1.00 4.70 C \ ATOM 245 O GLY A 33 -5.313 -7.898 7.815 1.00 5.21 O \ ATOM 246 N TYR A 34 -7.087 -6.904 8.774 1.00 4.79 N \ ATOM 247 CA TYR A 34 -6.345 -5.791 9.329 1.00 4.38 C \ ATOM 248 C TYR A 34 -6.704 -5.648 10.803 1.00 4.61 C \ ATOM 249 O TYR A 34 -7.792 -6.062 11.253 1.00 5.36 O \ ATOM 250 CB TYR A 34 -6.643 -4.526 8.558 1.00 5.25 C \ ATOM 251 CG TYR A 34 -6.044 -4.580 7.152 1.00 5.16 C \ ATOM 252 CD1 TYR A 34 -4.745 -4.204 6.938 1.00 5.29 C \ ATOM 253 CD2 TYR A 34 -6.747 -5.137 6.088 1.00 6.57 C \ ATOM 254 CE1 TYR A 34 -4.188 -4.273 5.681 1.00 6.31 C \ ATOM 255 CE2 TYR A 34 -6.114 -5.287 4.785 1.00 8.09 C \ ATOM 256 CZ TYR A 34 -4.854 -4.821 4.658 1.00 7.25 C \ ATOM 257 OH TYR A 34 -4.231 -4.917 3.388 1.00 10.09 O \ ATOM 258 N CYS A 35 -5.767 -5.092 11.552 1.00 3.99 N \ ATOM 259 CA CYS A 35 -5.986 -4.948 12.997 1.00 4.24 C \ ATOM 260 C CYS A 35 -7.017 -3.893 13.327 1.00 4.29 C \ ATOM 261 O CYS A 35 -7.257 -2.971 12.521 1.00 6.58 O \ ATOM 262 CB CYS A 35 -4.683 -4.616 13.644 1.00 4.62 C \ ATOM 263 SG CYS A 35 -3.389 -5.867 13.413 1.00 4.71 S \ ATOM 264 N AGLY A 36 -7.608 -3.962 14.472 0.50 4.65 N \ ATOM 265 N BGLY A 36 -7.592 -3.988 14.505 0.50 4.65 N \ ATOM 266 CA AGLY A 36 -8.550 -2.996 14.934 0.50 4.53 C \ ATOM 267 CA BGLY A 36 -8.552 -3.010 14.939 0.50 4.53 C \ ATOM 268 C AGLY A 36 -8.564 -2.877 16.411 0.50 4.87 C \ ATOM 269 C BGLY A 36 -8.555 -2.810 16.417 0.50 4.87 C \ ATOM 270 O AGLY A 36 -8.015 -3.658 17.134 0.50 5.41 O \ ATOM 271 O BGLY A 36 -9.152 -1.780 16.842 0.50 5.41 O \ TER 272 GLY A 36 \ TER 539 GLY B 36 \ HETATM 540 O HOH A 101 -14.117 -8.403 12.320 1.00 20.45 O \ HETATM 541 O HOH A 102 -11.394 12.474 10.308 1.00 18.50 O \ HETATM 542 O HOH A 103 -8.538 2.902 10.387 1.00 10.85 O \ HETATM 543 O HOH A 104 0.689 -6.899 20.387 1.00 10.37 O \ HETATM 544 O HOH A 105 -1.353 6.253 14.743 1.00 23.12 O \ HETATM 545 O HOH A 106 -3.819 9.992 9.701 1.00 16.96 O \ HETATM 546 O HOH A 107 -13.170 2.573 18.899 1.00 20.47 O \ HETATM 547 O HOH A 108 0.910 -11.584 8.917 1.00 17.32 O \ HETATM 548 O HOH A 109 -11.748 10.929 8.209 1.00 21.21 O \ HETATM 549 O HOH A 110 -3.633 -8.241 21.261 1.00 15.66 O \ HETATM 550 O HOH A 111 -10.196 -1.625 9.143 1.00 12.92 O \ HETATM 551 O HOH A 112 -2.434 -14.556 17.551 1.00 11.53 O \ HETATM 552 O HOH A 113 -9.699 -11.563 16.486 1.00 22.99 O \ HETATM 553 O HOH A 114 -1.870 -0.413 19.952 1.00 6.47 O \ HETATM 554 O HOH A 115 1.330 -9.020 8.750 1.00 20.92 O \ HETATM 555 O HOH A 116 1.204 -4.508 8.249 1.00 12.15 O \ HETATM 556 O HOH A 117 -9.706 -3.642 10.917 1.00 13.10 O \ HETATM 557 O HOH A 118 -6.987 -15.717 12.518 1.00 11.00 O \ HETATM 558 O HOH A 119 -10.694 2.807 12.046 1.00 20.07 O \ HETATM 559 O HOH A 120 -1.286 -8.994 20.158 1.00 17.91 O \ HETATM 560 O HOH A 121 -13.107 -0.496 17.360 1.00 29.06 O \ HETATM 561 O HOH A 122 -12.335 -3.033 11.433 1.00 23.14 O \ CONECT 1 2 3 6 \ CONECT 2 1 \ CONECT 3 1 4 5 \ CONECT 4 3 \ CONECT 5 3 \ CONECT 6 1 \ CONECT 15 204 \ CONECT 132 218 \ CONECT 182 263 \ CONECT 204 15 \ CONECT 218 132 \ CONECT 263 182 \ CONECT 282 471 \ CONECT 399 485 \ CONECT 449 530 \ CONECT 471 282 \ CONECT 485 399 \ CONECT 530 449 \ MASTER 343 0 1 4 4 0 0 6 581 2 18 6 \ END \ """, "6cdxchainA") cmd.hide("all") cmd.color('grey70', "6cdxchainA") cmd.show('cartoon', "6cdxchainA") cmd.center("6cdxchainA", state=0, origin=1) cmd.zoom("6cdxchainA", animate=-1) cmd.select("e6cdxA1", "c. A & i. 0-36") cmd.color("red", "e6cdxA1") cmd.disable("e6cdxA1")