cmd.read_pdbstr("""\ HEADER RNA BINDING PROTEIN/RNA 18-DEC-06 2OB7 \ TITLE STRUCTURE OF TMRNA-(SMPB)2 COMPLEX AS INFERRED FROM CRYO-EM \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: TRANSFER-MESSENGER RNA; \ COMPND 3 CHAIN: A; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: 16S RIBOSOMAL RNA; \ COMPND 6 CHAIN: D; \ COMPND 7 OTHER_DETAILS: HELIX 44 OF 30S RIBOSOMAL SUBUNIT; \ COMPND 8 MOL_ID: 3; \ COMPND 9 MOLECULE: SSRA-BINDING PROTEIN; \ COMPND 10 CHAIN: B, C \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 3 ORGANISM_TAXID: 274; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 6 ORGANISM_TAXID: 274; \ SOURCE 7 MOL_ID: 3; \ SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 9 ORGANISM_TAXID: 274 \ KEYWDS TMRNA, SMPB, RNA BINDING PROTEIN-RNA COMPLEX \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN B, C; P ATOMS ONLY, CHAIN A, D \ AUTHOR J.FRANK,B.FELDEN,R.GILLET,W.LI \ REVDAT 5 27-DEC-23 2OB7 1 REMARK \ REVDAT 4 18-JUL-18 2OB7 1 REMARK \ REVDAT 3 24-FEB-09 2OB7 1 VERSN \ REVDAT 2 17-APR-07 2OB7 1 JRNL \ REVDAT 1 23-JAN-07 2OB7 0 \ JRNL AUTH R.GILLET,S.KAUR,W.LI,M.HALLIER,B.FELDEN,J.FRANK \ JRNL TITL SCAFFOLDING AS AN ORGANIZING PRINCIPLE IN TRANS-TRANSLATION. \ JRNL TITL 2 THE ROLES OF SMALL PROTEIN B AND RIBOSOMAL PROTEIN S1. \ JRNL REF J.BIOL.CHEM. V. 282 6356 2007 \ JRNL REFN ISSN 0021-9258 \ JRNL PMID 17179154 \ JRNL DOI 10.1074/JBC.M609658200 \ REMARK 1 \ REMARK 1 REFERENCE 1 \ REMARK 1 AUTH S.KAUR,R.GILLET,W.LI,R.GURSKY,J.FRANK \ REMARK 1 TITL CRYO-EM VISUALIZATION OF TRANSFER MESSENGER RNA WITH TWO \ REMARK 1 TITL 2 SMPBS IN A STALLED RIBOSOME \ REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 103 16484 2006 \ REMARK 1 REFN ISSN 0027-8424 \ REMARK 1 REFERENCE 2 \ REMARK 1 AUTH M.VALLE,R.GILLET,K.KAUR,A.HENNE,V.RAMAKRISHNAN,J.FRANK \ REMARK 1 TITL VISUALIZING TMRNA ENTRY INTO A STALLED RIBOSOME \ REMARK 1 REF SCIENCE V. 300 127 2003 \ REMARK 1 REFN ISSN 0036-8075 \ REMARK 2 \ REMARK 2 RESOLUTION. 13.60 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : O, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : 1P6V \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : OTHER \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : METHOD--MANUAL FITTING USING STEREO \ REMARK 3 VISUALIZATION REFINEMENT PROTOCOL--MANUAL \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.820 \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 13.60 \ REMARK 3 NUMBER OF PARTICLES : 52829 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: NULL \ REMARK 4 \ REMARK 4 2OB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-06. \ REMARK 100 THE DEPOSITION ID IS D_1000040916. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : PRE-ACCOMMODATED RIBOSOMAL \ REMARK 245 TRANS-TRANSLATION COMPLEX: T. THERMOPHILUS 70S-MRNA-(P-SITE TRNA) \ REMARK 245 -TMRNA-(SMPB)2-(EF-TU)-GDP-KIRROMYCIN \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 32.00 \ REMARK 245 SAMPLE SUPPORT DETAILS : THIS GRID PLUS SAMPLE WAS KEPT \ REMARK 245 AT -80 DEGREE C FOR SEVERAL \ REMARK 245 DAYS BEFORE USE. \ REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FOR 5 SECONDS BEFORE \ REMARK 245 PLUNGING. RAPID PLUNGE FREEZING \ REMARK 245 IN LIQUID ETHANE. \ REMARK 245 SAMPLE BUFFER : POLIMIX \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : SEE EXPERIMENTAL PROCEDURES IN \ REMARK 245 KAUR ET AL. (PNAS). [DEPOSITION REFERS TO STRUCTURE OF TMRNA- \ REMARK 245 (SMPB)2 COMPLEX DERIVED BY FITTING OF EM MAP FROM KAUR ET AL. \ REMARK 245 FITTING WAS MODIFIED IN GILLET ET AL.] \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : 01-JUN-04 \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 296.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1475.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 3635.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 NOMINAL CS : 2.00 \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1500.00 \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 55000 \ REMARK 245 CALIBRATED MAGNIFICATION : 49000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, B, C \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 GLY B 1 \ REMARK 465 LYS B 2 \ REMARK 465 LYS B 70 \ REMARK 465 HIS B 71 \ REMARK 465 ALA B 72 \ REMARK 465 THR B 73 \ REMARK 465 ILE B 74 \ REMARK 465 GLU B 75 \ REMARK 465 TYR B 131 \ REMARK 465 ASP B 132 \ REMARK 465 ARG B 133 \ REMARK 465 ARG B 134 \ REMARK 465 ARG B 135 \ REMARK 465 GLU B 136 \ REMARK 465 LEU B 137 \ REMARK 465 LYS B 138 \ REMARK 465 GLU B 139 \ REMARK 465 LYS B 140 \ REMARK 465 ALA B 141 \ REMARK 465 MET B 142 \ REMARK 465 LYS B 143 \ REMARK 465 ARG B 144 \ REMARK 465 GLU B 145 \ REMARK 465 LEU B 146 \ REMARK 465 GLU B 147 \ REMARK 465 ARG B 148 \ REMARK 465 GLU B 149 \ REMARK 465 PHE B 150 \ REMARK 465 LYS B 151 \ REMARK 465 GLY B 152 \ REMARK 465 LYS B 153 \ REMARK 465 ILE B 154 \ REMARK 465 HIS B 155 \ REMARK 465 LEU B 156 \ REMARK 465 GLY C 1 \ REMARK 465 LYS C 2 \ REMARK 465 THR C 73 \ REMARK 465 ILE C 74 \ REMARK 465 GLU C 75 \ REMARK 465 LYS C 102 \ REMARK 465 GLY C 103 \ REMARK 465 TYR C 104 \ REMARK 465 THR C 105 \ REMARK 465 ALA C 125 \ REMARK 465 LYS C 126 \ REMARK 465 GLY C 127 \ REMARK 465 LYS C 128 \ REMARK 465 LYS C 129 \ REMARK 465 LEU C 130 \ REMARK 465 TYR C 131 \ REMARK 465 ASP C 132 \ REMARK 465 ARG C 133 \ REMARK 465 ARG C 134 \ REMARK 465 ARG C 135 \ REMARK 465 GLU C 136 \ REMARK 465 LEU C 137 \ REMARK 465 LYS C 138 \ REMARK 465 GLU C 139 \ REMARK 465 LYS C 140 \ REMARK 465 ALA C 141 \ REMARK 465 MET C 142 \ REMARK 465 LYS C 143 \ REMARK 465 ARG C 144 \ REMARK 465 GLU C 145 \ REMARK 465 LEU C 146 \ REMARK 465 GLU C 147 \ REMARK 465 ARG C 148 \ REMARK 465 GLU C 149 \ REMARK 465 PHE C 150 \ REMARK 465 LYS C 151 \ REMARK 465 GLY C 152 \ REMARK 465 LYS C 153 \ REMARK 465 ILE C 154 \ REMARK 465 HIS C 155 \ REMARK 465 LEU C 156 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 P A A 101 P C A 138 1.92 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1PV6 RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF COMPLEX FORMED BY SMPB AND TLD OF TMRNA. \ REMARK 900 RELATED ID: 1N34 RELATED DB: PDB \ REMARK 900 X-RAY STRUCTURE OF 30S SUBUNIT FROM T. THERMOPHILUS (ONLY HELIX 44 \ REMARK 900 DEPOSITED HERE, FOR POSITIONAL REFERENCE) \ REMARK 900 RELATED ID: EMD-1310 RELATED DB: EMDB \ REMARK 900 STALLED 70S RIBOSOME (I.E., WITHOUT ANY CODON IN A SITE) BOUND WITH \ REMARK 900 SMPB \ REMARK 900 RELATED ID: EMD-1311 RELATED DB: EMDB \ REMARK 900 PRE-ACCOMMODATED RIBOSOMAL TRANS-TRANSLATION COMPLEX: T. \ REMARK 900 THERMOPHILUS 70S-MRNA-(P-SITE TRNA)-TMRNA-(SMPB)2-(EF-TU)-GDP- \ REMARK 900 KIRROMYCIN IN THE PRESENCE OF PROTEIN S1 \ REMARK 900 RELATED ID: EMD-1312 RELATED DB: EMDB \ REMARK 900 PRE-ACCOMMODATED RIBOSOMAL TRANS-TRANSLATION COMPLEX: T. \ REMARK 900 THERMOPHILUS 70S-MRNA-(P-SITE TRNA)-TMRNA-(SMPB)2-(EF-TU)-GDP- \ REMARK 900 KIRROMYCIN IN THE ABSENCE OF PROTEIN S1 \ REMARK 900 RELATED ID: 1Q2B RELATED DB: PDB \ REMARK 900 X-RAY STRUCTURE OF EF-TU FITTED INTO PRE-ACCOMMODATED RIBOSOMAL \ REMARK 900 TRANSLATION COMPLEX, PLACED IN THE RIBOSOMAL ENRIVONMENT BY \ REMARK 900 REFERENCE TO S12 AND HELIX 44 OF THE SMALL SUBUNIT, AND HELIX 69 \ REMARK 900 AND GAC OF THE LARGE SUBUNIT (1QZC) \ REMARK 999 \ REMARK 999 SEQUENCE \ REMARK 999 THE DEPOSITED ENTRY IS A MODEL TO FIT THE CRYO-EM \ REMARK 999 MAP OF TMRNA+SMPB(2) FROM THERMUS THERMOPHILUS. \ REMARK 999 THE DEPOSITION INCLUDES 4 CHAINS: \ REMARK 999 CHAIN A: TMRNA MODEL \ REMARK 999 CHAINS B,C: SMPB (FROM 1P6V.PDB CHAIN A, FOR SMPB \ REMARK 999 FROM AQUIFEX AEOLICUS); \ REMARK 999 CHAIN D: HELIX 44 OF 30S RIBOSOMAL SUBUNIT \ REMARK 999 (FROM 1N34.PDB CHAIN A:1406-1496. X-RAY STRUCTURE \ REMARK 999 OF 1N34 IS FROM THERMUS THERMOPHILUS). \ REMARK 999 THE E.COLI MODEL ESCHCOLITM3D-MODEL-72.PDB \ REMARK 999 (HTTP://WWW.AG.AUBURN.EDU/MIRROR/TMRDB/RNA/TMRNA.HTML/) \ REMARK 999 WAS USED AS A TEMPLATE TO BUILD THE MODEL BY REPLACING \ REMARK 999 SEVERAL FRAGMENTS WHICH HAVE X-RAY CRYSTAL AS ALTERNATIVES, \ REMARK 999 AND BY FITTING ALL THE STRUCTURES INTO THE CRYO-EM MAPS. \ REMARK 999 NUCLEOTIDE NUMBERING IN THIS MODEL FOLLOWS E.COLI SEQUENCE. \ REMARK 999 CONSIDERING THE DIFFERENCES BETWEEN TMRNA SEQUENCES FROM \ REMARK 999 E.COLI AND T.THERMOPHILUS, A SMALL NUMBER OF NUCLEOTIDES \ REMARK 999 IN THE TEMPLATE MODEL ARE NOT INCLUDED IN THIS MODEL. \ DBREF 2OB7 A 1 362 PDB 2OB7 2OB7 1 362 \ DBREF 2OB7 D 1406 1496 PDB 2OB7 2OB7 1406 1496 \ DBREF 2OB7 B 1 156 PDB 2OB7 2OB7 1 156 \ DBREF 2OB7 C 1 156 PDB 2OB7 2OB7 1 156 \ SEQRES 1 A 328 G G C G C G U A U U C G A \ SEQRES 2 A 328 C G G G G A C C C A A G G \ SEQRES 3 A 328 U G C A U G C C G A G G G \ SEQRES 4 A 328 G C G G U U G G C C U C G \ SEQRES 5 A 328 U A A A A A G C C G C A A \ SEQRES 6 A 328 C G G C A U A A C U G C C \ SEQRES 7 A 328 A A C A C C A A C U A C G \ SEQRES 8 A 328 C U C U G G C A G C U U A \ SEQRES 9 A 328 A U A A C C U G C U U A C \ SEQRES 10 A 328 C U C U C U C C C U A G C \ SEQRES 11 A 328 C U C C G C U C U U A G G \ SEQRES 12 A 328 A C G G G G A U C A A G A \ SEQRES 13 A 328 G A G G U C A A A C C C A \ SEQRES 14 A 328 A A A G A G A U C G C G U \ SEQRES 15 A 328 G G A A G C C C U G C C U \ SEQRES 16 A 328 G G G G U U G A A G C G U \ SEQRES 17 A 328 U A A A A C U U A A U C A \ SEQRES 18 A 328 G G C U G U U U G U U A G \ SEQRES 19 A 328 U G G C G U G U C C G U C \ SEQRES 20 A 328 C G C A G C U G G C A A G \ SEQRES 21 A 328 C G A A U G U A A A G A C \ SEQRES 22 A 328 U G A C U A A G C A U G A \ SEQRES 23 A 328 C C G A G G A C C U C G G \ SEQRES 24 A 328 A C G C G G G U U C G A U \ SEQRES 25 A 328 U C C C G C A C G C G C C \ SEQRES 26 A 328 U C C \ SEQRES 1 D 86 U C A C G C C A U G G G A \ SEQRES 2 D 86 G C G G G C U C U A C C C \ SEQRES 3 D 86 G A A G U C G C C G G G A \ SEQRES 4 D 86 G C C U A C G G G C A G G \ SEQRES 5 D 86 C G C C G A G G G U A G G \ SEQRES 6 D 86 G C C C G U G A C U G G G \ SEQRES 7 D 86 G C G A A G U C \ SEQRES 1 B 156 GLY LYS SER ASP LYS ILE ILE PRO ILE ALA GLU ASN LYS \ SEQRES 2 B 156 GLU ALA LYS ALA LYS TYR ASP ILE LEU GLU THR TYR GLU \ SEQRES 3 B 156 ALA GLY ILE VAL LEU LYS GLY SER GLU VAL LYS SER LEU \ SEQRES 4 B 156 ARG GLU LYS GLY THR VAL SER PHE LYS ASP SER PHE VAL \ SEQRES 5 B 156 ARG ILE GLU ASN GLY GLU ALA TRP LEU TYR ASN LEU TYR \ SEQRES 6 B 156 ILE ALA PRO TYR LYS HIS ALA THR ILE GLU ASN HIS ASP \ SEQRES 7 B 156 PRO LEU ARG LYS ARG LYS LEU LEU LEU HIS LYS ARG GLU \ SEQRES 8 B 156 ILE MET ARG LEU TYR GLY LYS VAL GLN GLU LYS GLY TYR \ SEQRES 9 B 156 THR ILE ILE PRO LEU LYS LEU TYR TRP LYS ASN ASN LYS \ SEQRES 10 B 156 VAL LYS VAL LEU ILE ALA LEU ALA LYS GLY LYS LYS LEU \ SEQRES 11 B 156 TYR ASP ARG ARG ARG GLU LEU LYS GLU LYS ALA MET LYS \ SEQRES 12 B 156 ARG GLU LEU GLU ARG GLU PHE LYS GLY LYS ILE HIS LEU \ SEQRES 1 C 156 GLY LYS SER ASP LYS ILE ILE PRO ILE ALA GLU ASN LYS \ SEQRES 2 C 156 GLU ALA LYS ALA LYS TYR ASP ILE LEU GLU THR TYR GLU \ SEQRES 3 C 156 ALA GLY ILE VAL LEU LYS GLY SER GLU VAL LYS SER LEU \ SEQRES 4 C 156 ARG GLU LYS GLY THR VAL SER PHE LYS ASP SER PHE VAL \ SEQRES 5 C 156 ARG ILE GLU ASN GLY GLU ALA TRP LEU TYR ASN LEU TYR \ SEQRES 6 C 156 ILE ALA PRO TYR LYS HIS ALA THR ILE GLU ASN HIS ASP \ SEQRES 7 C 156 PRO LEU ARG LYS ARG LYS LEU LEU LEU HIS LYS ARG GLU \ SEQRES 8 C 156 ILE MET ARG LEU TYR GLY LYS VAL GLN GLU LYS GLY TYR \ SEQRES 9 C 156 THR ILE ILE PRO LEU LYS LEU TYR TRP LYS ASN ASN LYS \ SEQRES 10 C 156 VAL LYS VAL LEU ILE ALA LEU ALA LYS GLY LYS LYS LEU \ SEQRES 11 C 156 TYR ASP ARG ARG ARG GLU LEU LYS GLU LYS ALA MET LYS \ SEQRES 12 C 156 ARG GLU LEU GLU ARG GLU PHE LYS GLY LYS ILE HIS LEU \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 329 C A 362 \ TER 416 C D1496 \ ATOM 417 CA SER B 3 -49.885 -4.553 -37.081 1.00175.32 C \ ATOM 418 CA ASP B 4 -50.225 -1.382 -34.962 1.00189.75 C \ ATOM 419 CA LYS B 5 -46.928 0.171 -33.882 1.00164.82 C \ ATOM 420 CA ILE B 6 -47.364 2.935 -31.290 1.00128.80 C \ ATOM 421 CA ILE B 7 -45.025 5.223 -29.330 1.00118.91 C \ ATOM 422 CA PRO B 8 -45.865 6.916 -26.006 1.00101.95 C \ ATOM 423 CA ILE B 9 -45.583 10.707 -25.810 1.00 89.49 C \ ATOM 424 CA ALA B 10 -47.060 11.773 -22.479 1.00 71.78 C \ ATOM 425 CA GLU B 11 -49.351 10.260 -19.829 1.00109.56 C \ ATOM 426 CA ASN B 12 -51.499 12.039 -17.232 1.00103.61 C \ ATOM 427 CA LYS B 13 -50.443 10.801 -13.792 1.00152.92 C \ ATOM 428 CA GLU B 14 -52.362 13.595 -12.082 1.00113.94 C \ ATOM 429 CA ALA B 15 -55.514 11.738 -13.180 1.00 78.15 C \ ATOM 430 CA LYS B 16 -55.032 8.055 -12.448 1.00 96.26 C \ ATOM 431 CA ALA B 17 -55.573 8.562 -8.725 1.00112.82 C \ ATOM 432 CA LYS B 18 -58.378 11.096 -9.068 1.00 92.76 C \ ATOM 433 CA TYR B 19 -61.105 10.038 -11.501 1.00 95.29 C \ ATOM 434 CA ASP B 20 -62.128 6.382 -11.780 1.00 99.96 C \ ATOM 435 CA ILE B 21 -62.443 5.717 -15.515 1.00 71.89 C \ ATOM 436 CA LEU B 22 -65.842 4.718 -16.879 1.00 71.70 C \ ATOM 437 CA GLU B 23 -65.104 4.580 -20.618 1.00 74.32 C \ ATOM 438 CA THR B 24 -62.077 5.355 -22.785 1.00 53.46 C \ ATOM 439 CA TYR B 25 -62.051 6.622 -26.352 1.00 67.90 C \ ATOM 440 CA GLU B 26 -59.276 7.113 -28.845 1.00 81.95 C \ ATOM 441 CA ALA B 27 -57.955 10.467 -30.017 1.00 90.99 C \ ATOM 442 CA GLY B 28 -58.046 12.371 -33.246 1.00 70.39 C \ ATOM 443 CA ILE B 29 -56.598 15.896 -32.983 1.00 74.32 C \ ATOM 444 CA VAL B 30 -56.264 18.540 -35.642 1.00 73.86 C \ ATOM 445 CA LEU B 31 -52.773 19.701 -34.755 1.00 77.65 C \ ATOM 446 CA LYS B 32 -50.944 22.653 -36.262 1.00 91.46 C \ ATOM 447 CA GLY B 33 -47.760 21.856 -38.153 1.00108.43 C \ ATOM 448 CA SER B 34 -45.217 23.288 -35.750 1.00 86.71 C \ ATOM 449 CA GLU B 35 -46.858 21.418 -32.893 1.00 91.27 C \ ATOM 450 CA VAL B 36 -46.145 18.081 -34.556 1.00 75.09 C \ ATOM 451 CA LYS B 37 -42.499 18.927 -35.101 1.00 98.20 C \ ATOM 452 CA SER B 38 -42.047 20.080 -31.497 1.00 94.21 C \ ATOM 453 CA LEU B 39 -43.766 16.870 -30.428 1.00 86.13 C \ ATOM 454 CA ARG B 40 -41.215 14.805 -32.337 1.00116.88 C \ ATOM 455 CA GLU B 41 -38.304 17.006 -31.386 1.00140.22 C \ ATOM 456 CA LYS B 42 -39.265 15.699 -27.918 1.00136.27 C \ ATOM 457 CA GLY B 43 -40.676 18.966 -26.527 1.00 89.78 C \ ATOM 458 CA THR B 44 -42.361 19.235 -23.142 1.00137.64 C \ ATOM 459 CA VAL B 45 -46.110 18.613 -22.674 1.00 78.90 C \ ATOM 460 CA SER B 46 -48.423 18.679 -19.638 1.00129.20 C \ ATOM 461 CA PHE B 47 -52.035 17.895 -18.827 1.00 91.08 C \ ATOM 462 CA LYS B 48 -52.162 20.199 -15.790 1.00103.01 C \ ATOM 463 CA ASP B 49 -55.673 21.598 -15.468 1.00103.39 C \ ATOM 464 CA SER B 50 -56.449 20.271 -18.955 1.00 71.36 C \ ATOM 465 CA PHE B 51 -60.041 19.252 -19.728 1.00 57.52 C \ ATOM 466 CA VAL B 52 -62.372 18.508 -22.639 1.00 68.22 C \ ATOM 467 CA ARG B 53 -65.515 20.369 -23.697 1.00 83.01 C \ ATOM 468 CA ILE B 54 -68.192 19.646 -26.263 1.00 54.09 C \ ATOM 469 CA GLU B 55 -69.128 22.857 -28.060 1.00 62.17 C \ ATOM 470 CA ASN B 56 -71.130 23.161 -31.288 1.00 76.93 C \ ATOM 471 CA GLY B 57 -71.464 19.425 -31.710 1.00 60.43 C \ ATOM 472 CA GLU B 58 -67.661 19.254 -31.573 1.00 80.36 C \ ATOM 473 CA ALA B 59 -65.141 17.911 -29.020 1.00 63.84 C \ ATOM 474 CA TRP B 60 -62.398 20.199 -27.708 1.00 80.27 C \ ATOM 475 CA LEU B 61 -59.258 19.620 -25.593 1.00 78.58 C \ ATOM 476 CA TYR B 62 -58.818 22.816 -23.614 1.00 76.71 C \ ATOM 477 CA ASN B 63 -55.613 23.287 -21.663 1.00 71.33 C \ ATOM 478 CA LEU B 64 -52.835 21.144 -23.066 1.00 82.29 C \ ATOM 479 CA TYR B 65 -49.375 22.710 -23.033 1.00 86.62 C \ ATOM 480 CA ILE B 66 -47.428 21.711 -26.119 1.00 91.43 C \ ATOM 481 CA ALA B 67 -43.934 23.172 -26.047 1.00 89.06 C \ ATOM 482 CA PRO B 68 -43.103 25.331 -29.124 1.00135.37 C \ ATOM 483 CA TYR B 69 -39.850 25.252 -31.143 1.00168.90 C \ ATOM 484 CA ASN B 76 -47.692 32.461 -32.984 1.00192.36 C \ ATOM 485 CA HIS B 77 -48.774 29.038 -31.695 1.00183.05 C \ ATOM 486 CA ASP B 78 -50.352 29.677 -28.313 1.00118.32 C \ ATOM 487 CA PRO B 79 -49.205 26.536 -26.396 1.00 68.19 C \ ATOM 488 CA LEU B 80 -52.726 26.159 -24.996 1.00 88.93 C \ ATOM 489 CA ARG B 81 -55.073 26.427 -28.021 1.00 84.61 C \ ATOM 490 CA LYS B 82 -58.552 24.924 -28.027 1.00 87.61 C \ ATOM 491 CA ARG B 83 -57.524 21.889 -30.107 1.00 71.01 C \ ATOM 492 CA LYS B 84 -60.281 20.003 -31.892 1.00 71.81 C \ ATOM 493 CA LEU B 85 -60.719 16.260 -31.544 1.00 66.19 C \ ATOM 494 CA LEU B 86 -61.565 13.891 -34.435 1.00 53.15 C \ ATOM 495 CA LEU B 87 -64.012 11.567 -32.817 1.00 51.48 C \ ATOM 496 CA HIS B 88 -67.221 10.455 -34.567 1.00 53.52 C \ ATOM 497 CA LYS B 89 -70.504 12.255 -34.090 1.00 64.32 C \ ATOM 498 CA ARG B 90 -72.227 9.369 -32.378 1.00 56.96 C \ ATOM 499 CA GLU B 91 -69.276 9.334 -30.006 1.00 75.88 C \ ATOM 500 CA ILE B 92 -69.587 12.991 -29.212 1.00 59.33 C \ ATOM 501 CA MET B 93 -73.337 12.760 -28.762 1.00 72.77 C \ ATOM 502 CA ARG B 94 -72.711 9.706 -26.587 1.00 65.15 C \ ATOM 503 CA LEU B 95 -70.138 11.435 -24.391 1.00 54.77 C \ ATOM 504 CA TYR B 96 -72.239 14.587 -24.311 1.00 53.57 C \ ATOM 505 CA GLY B 97 -75.261 12.653 -23.080 1.00 63.59 C \ ATOM 506 CA LYS B 98 -73.433 10.998 -20.170 1.00 62.59 C \ ATOM 507 CA VAL B 99 -72.039 14.377 -19.049 1.00 60.90 C \ ATOM 508 CA GLN B 100 -75.579 15.640 -18.591 1.00 65.88 C \ ATOM 509 CA GLU B 101 -77.590 12.560 -17.506 1.00 88.72 C \ ATOM 510 CA LYS B 102 -75.032 11.727 -14.805 1.00 64.20 C \ ATOM 511 CA GLY B 103 -72.925 14.846 -14.424 1.00 59.21 C \ ATOM 512 CA TYR B 104 -69.752 12.934 -15.360 1.00 78.02 C \ ATOM 513 CA THR B 105 -66.636 14.552 -16.802 1.00 89.19 C \ ATOM 514 CA ILE B 106 -64.379 14.030 -19.830 1.00 68.50 C \ ATOM 515 CA ILE B 107 -60.574 14.211 -19.359 1.00 80.28 C \ ATOM 516 CA PRO B 108 -57.429 13.368 -21.401 1.00 60.14 C \ ATOM 517 CA LEU B 109 -55.478 10.273 -20.373 1.00 79.89 C \ ATOM 518 CA LYS B 110 -52.509 10.337 -22.765 1.00 66.11 C \ ATOM 519 CA LEU B 111 -50.811 11.462 -25.959 1.00 89.67 C \ ATOM 520 CA TYR B 112 -49.137 9.009 -28.269 1.00 83.02 C \ ATOM 521 CA TRP B 113 -48.086 8.155 -31.787 1.00 84.49 C \ ATOM 522 CA LYS B 114 -49.911 5.453 -33.743 1.00 78.52 C \ ATOM 523 CA ASN B 115 -48.610 5.188 -37.288 1.00 84.58 C \ ATOM 524 CA ASN B 116 -46.911 8.580 -37.073 1.00 98.90 C \ ATOM 525 CA LYS B 117 -50.329 10.054 -36.297 1.00 93.36 C \ ATOM 526 CA VAL B 118 -50.589 11.945 -33.023 1.00 60.32 C \ ATOM 527 CA LYS B 119 -53.452 10.807 -30.847 1.00 65.87 C \ ATOM 528 CA VAL B 120 -54.885 11.546 -27.406 1.00 66.47 C \ ATOM 529 CA LEU B 121 -56.745 9.007 -25.260 1.00 77.69 C \ ATOM 530 CA ILE B 122 -59.950 10.357 -23.772 1.00 61.04 C \ ATOM 531 CA ALA B 123 -62.000 9.011 -20.874 1.00 67.88 C \ ATOM 532 CA LEU B 124 -65.431 9.688 -19.421 1.00 59.13 C \ ATOM 533 CA ALA B 125 -64.783 9.811 -15.689 1.00 80.09 C \ ATOM 534 CA LYS B 126 -66.243 10.216 -12.198 1.00 57.67 C \ ATOM 535 CA GLY B 127 -64.713 11.518 -8.955 1.00104.97 C \ ATOM 536 CA LYS B 128 -63.228 9.394 -6.188 1.00109.42 C \ ATOM 537 CA LYS B 129 -64.658 10.932 -2.988 1.00147.87 C \ ATOM 538 CA LEU B 130 -61.515 9.911 -1.053 1.00158.85 C \ TER 539 LEU B 130 \ TER 655 LEU C 124 \ MASTER 249 0 0 0 0 0 0 6 651 4 0 57 \ END \ """, "2ob7chainB") cmd.hide("all") cmd.color('grey70', "2ob7chainB") cmd.show('cartoon', "2ob7chainB") cmd.center("2ob7chainB", state=0, origin=1) cmd.zoom("2ob7chainB", animate=-1) cmd.select("e2ob7B1", "c. B & i. 9-128") cmd.color("red", "e2ob7B1") cmd.disable("e2ob7B1")