cmd.read_pdbstr("""\ HEADER RIBOSOME 07-APR-08 2VRH \ TITLE STRUCTURE OF THE E. COLI TRIGGER FACTOR BOUND TO A TRANSLATING \ TITLE 2 RIBOSOME \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: TRIGGER FACTOR; \ COMPND 3 CHAIN: A; \ COMPND 4 ENGINEERED: YES; \ COMPND 5 OTHER_DETAILS: BASED ON PDB 1W26_A. RESIDUES 22-62 WERE REPLACED WITH \ COMPND 6 THE CORRESPONDING RESIDUES OF PDB 1OMS_B; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: 50S RIBOSOMAL PROTEIN L23; \ COMPND 9 CHAIN: B; \ COMPND 10 OTHER_DETAILS: BASED ON PDB 2AW4_T; \ COMPND 11 MOL_ID: 3; \ COMPND 12 MOLECULE: 50S RIBOSOMAL PROTEIN L24; \ COMPND 13 CHAIN: C; \ COMPND 14 FRAGMENT: RESIDUES 2-104; \ COMPND 15 OTHER_DETAILS: BASED ON PDB 2AW4_U; \ COMPND 16 MOL_ID: 4; \ COMPND 17 MOLECULE: 50S RIBOSOMAL PROTEIN L29; \ COMPND 18 CHAIN: D; \ COMPND 19 OTHER_DETAILS: BASED ON PDB 2AW4_X \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 3 ORGANISM_TAXID: 562; \ SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 6 OTHER_DETAILS: BASED ON PDB 1W26_A; \ SOURCE 7 MOL_ID: 2; \ SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 9 ORGANISM_TAXID: 562; \ SOURCE 10 OTHER_DETAILS: BASED ON PDB 2AW4_T; \ SOURCE 11 MOL_ID: 3; \ SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 13 ORGANISM_TAXID: 562; \ SOURCE 14 OTHER_DETAILS: BASED ON PDB 2AW4_U; \ SOURCE 15 MOL_ID: 4; \ SOURCE 16 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 17 ORGANISM_TAXID: 562; \ SOURCE 18 OTHER_DETAILS: BASED ON PDB 2AW4_X \ KEYWDS RIBOSOME, TRIGGER FACTOR, RIBOSOMAL PROTEIN, RIBONUCLEOPROTEIN, CO- \ KEYWDS 2 TRANSLATIONAL PROTEIN FOLDING, ROTAMASE, CHAPERONE, ISOMERASE, CELL \ KEYWDS 3 CYCLE, RNA-BINDING, RRNA-BINDING, CELL DIVISION, RIBOSOME-NASCENT \ KEYWDS 4 CHAIN COMPLEX \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN A, B, C, D \ AUTHOR F.MERZ,D.BOEHRINGER,C.SCHAFFITZEL,S.PREISSLER,A.HOFFMANN,T.MAIER, \ AUTHOR 2 A.RUTKOWSKA,J.LOZZA,N.BAN,B.BUKAU,E.DEUERLING \ REVDAT 7 06-NOV-24 2VRH 1 REMARK \ REVDAT 6 08-MAY-24 2VRH 1 REMARK \ REVDAT 5 23-AUG-17 2VRH 1 REMARK \ REVDAT 4 07-AUG-13 2VRH 1 REMARK CRYST1 SCALE1 SCALE2 \ REVDAT 4 2 1 SCALE3 \ REVDAT 3 14-DEC-11 2VRH 1 REMARK VERSN \ REVDAT 2 24-FEB-09 2VRH 1 VERSN \ REVDAT 1 17-JUN-08 2VRH 0 \ JRNL AUTH F.MERZ,D.BOEHRINGER,C.SCHAFFITZEL,S.PREISSLER,A.HOFFMANN, \ JRNL AUTH 2 T.MAIER,A.RUTKOWSKA,J.LOZZA,N.BAN,B.BUKAU,E.DEUERLING \ JRNL TITL MOLECULAR MECHANISM AND STRUCTURE OF TRIGGER FACTOR BOUND TO \ JRNL TITL 2 THE TRANSLATING RIBOSOME. \ JRNL REF EMBO J. V. 27 1622 2008 \ JRNL REFN ISSN 0261-4189 \ JRNL PMID 18497744 \ JRNL DOI 10.1038/EMBOJ.2008.89 \ REMARK 2 \ REMARK 2 RESOLUTION. 19.00 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : MOLREP, IMAGIC, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : 2AW4 \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT \ REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 4.233 \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 19.00 \ REMARK 3 NUMBER OF PARTICLES : NULL \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: FITTING OF CRYSTAL STRUCTURES INTO MAP EMD-1499 \ REMARK 4 \ REMARK 4 2VRH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. \ REMARK 100 THE DEPOSITION ID IS D_1290035874. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : STRUCTURE OF THE E. COLI \ REMARK 245 TRIGGER FACTOR BOUND TO A \ REMARK 245 TRANSLATING RIBOSOME \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL \ REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON \ REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID ETHANE \ REMARK 245 SAMPLE BUFFER : 50 MM HEPES-KOH PH 7.5, 100 MM \ REMARK 245 KCL, 25 MM MGCL2, 0.5 MG/ML \ REMARK 245 CHLORAMPHENICOL \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : NULL \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : NULL \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 88.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI 20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 NOMINAL CS : NULL \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 50000 \ REMARK 245 CALIBRATED MAGNIFICATION : 50000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 ALA A 432 \ REMARK 465 GLU B 100 \ REMARK 465 LYS C 103 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1P9Y RELATED DB: PDB \ REMARK 900 RIBOSOME BINDING OF E. COLI TRIGGER FACTOR MUTANT F44L. \ REMARK 900 RELATED ID: 2J28 RELATED DB: PDB \ REMARK 900 MODEL OF E. COLI SRP BOUND TO 70S RNCS \ REMARK 900 RELATED ID: 2VHM RELATED DB: PDB \ REMARK 900 STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME \ REMARK 900 RELATED ID: 2WWQ RELATED DB: PDB \ REMARK 900 E.COLI 70S RIBOSOME STALLED DURING TRANSLATION OF TNAC LEADER \ REMARK 900 PEPTIDE \ REMARK 900 RELATED ID: 1P86 RELATED DB: PDB \ REMARK 900 REAL SPACE REFINED COORDINATES OF THE 50S SUBUNIT FITTEDINTO THE \ REMARK 900 LOW RESOLUTION CRYO-EM MAP OF THE INITIATION-LIKESTATE OF E. COLI \ REMARK 900 70S RIBOSOME \ REMARK 900 RELATED ID: 2AW4 RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT \ REMARK 900 3.5 A RESOLUTION. THIS FILE CONTAINSTHE 50S SUBUNIT OF ONE 70S \ REMARK 900 RIBOSOME. THE ENTIRE CRYSTALSTRUCTURE CONTAINS TWO 70S RIBOSOMES \ REMARK 900 AND IS DESCRIBED INREMARK 400. \ REMARK 900 RELATED ID: 1W26 RELATED DB: PDB \ REMARK 900 TRIGGER FACTOR IN COMPLEX WITH THE RIBOSOME FORMS A MOLECULAR \ REMARK 900 CRADLE FOR NASCENT PROTEINS \ REMARK 900 RELATED ID: 1W2B RELATED DB: PDB \ REMARK 900 TRIGGER FACTOR RIBOSOME BINDING DOMAIN IN COMPLEX WITH 50S \ REMARK 900 RELATED ID: 1P85 RELATED DB: PDB \ REMARK 900 REAL SPACE REFINED COORDINATES OF THE 50S SUBUNIT FITTEDINTO THE \ REMARK 900 LOW RESOLUTION CRYO-EM MAP OF THE EF -G.GTP STATEOF E. COLI 70S \ REMARK 900 RIBOSOME \ REMARK 900 RELATED ID: 2VHN RELATED DB: PDB \ REMARK 900 STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME \ REMARK 900 RELATED ID: 1OMS RELATED DB: PDB \ REMARK 900 STRUCTURE DETERMINATION BY MAD: E.COLI TRIGGER FACTORBINDING AT THE \ REMARK 900 RIBOSOMAL EXIT TUNNEL. \ REMARK 900 RELATED ID: 2AWB RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT \ REMARK 900 3.5 A RESOLUTION. THIS FILE CONTAINSTHE 50S SUBUNIT OF THE SECOND \ REMARK 900 70S RIBOSOME. THE ENTIRECRYSTAL STRUCTURE CONTAINS TWO 70S \ REMARK 900 RIBOSOMES AND ISDESCRIBED IN REMARK 400. \ REMARK 900 RELATED ID: 1L1P RELATED DB: PDB \ REMARK 900 SOLUTION STRUCTURE OF THE PPIASE DOMAIN FROM E. COLITRIGGER FACTOR \ REMARK 900 RELATED ID: EMD-1499 RELATED DB: EMDB \ REMARK 900 STRUCTURE OF THE E. COLI TRIGGER FACTOR BOUND TO A TRANSLATING \ REMARK 900 RIBOSOME \ DBREF 2VRH A 1 432 UNP P0A850 TIG_ECOLI 1 432 \ DBREF 2VRH B 1 100 UNP Q0TCE3 RL23_ECOL5 1 100 \ DBREF 2VRH C 1 103 UNP P60624 RL24_ECOLI 2 104 \ DBREF 2VRH D 1 63 UNP P0A7M6 RL29_ECOLI 1 63 \ SEQRES 1 A 432 MSE GLN VAL SER VAL GLU THR THR GLN GLY LEU GLY ARG \ SEQRES 2 A 432 ARG VAL THR ILE THR ILE ALA ALA ASP SER ILE GLU THR \ SEQRES 3 A 432 ALA VAL LYS SER GLU LEU VAL ASN VAL ALA LYS LYS VAL \ SEQRES 4 A 432 ARG ILE ASP GLY PHE ARG LYS GLY LYS VAL PRO MSE ASN \ SEQRES 5 A 432 ILE VAL ALA GLN ARG TYR GLY ALA SER VAL ARG GLN ASP \ SEQRES 6 A 432 VAL LEU GLY ASP LEU MSE SER ARG ASN PHE ILE ASP ALA \ SEQRES 7 A 432 ILE ILE LYS GLU LYS ILE ASN PRO ALA GLY ALA PRO THR \ SEQRES 8 A 432 TYR VAL PRO GLY GLU TYR LYS LEU GLY GLU ASP PHE THR \ SEQRES 9 A 432 TYR SER VAL GLU PHE GLU VAL TYR PRO GLU VAL GLU LEU \ SEQRES 10 A 432 GLN GLY LEU GLU ALA ILE GLU VAL GLU LYS PRO ILE VAL \ SEQRES 11 A 432 GLU VAL THR ASP ALA ASP VAL ASP GLY MSE LEU ASP THR \ SEQRES 12 A 432 LEU ARG LYS GLN GLN ALA THR TRP LYS GLU LYS ASP GLY \ SEQRES 13 A 432 ALA VAL GLU ALA GLU ASP ARG VAL THR ILE ASP PHE THR \ SEQRES 14 A 432 GLY SER VAL ASP GLY GLU GLU PHE GLU GLY GLY LYS ALA \ SEQRES 15 A 432 SER ASP PHE VAL LEU ALA MSE GLY GLN GLY ARG MSE ILE \ SEQRES 16 A 432 PRO GLY PHE GLU ASP GLY ILE LYS GLY HIS LYS ALA GLY \ SEQRES 17 A 432 GLU GLU PHE THR ILE ASP VAL THR PHE PRO GLU GLU TYR \ SEQRES 18 A 432 HIS ALA GLU ASN LEU LYS GLY LYS ALA ALA LYS PHE ALA \ SEQRES 19 A 432 ILE ASN LEU LYS LYS VAL GLU GLU ARG GLU LEU PRO GLU \ SEQRES 20 A 432 LEU THR ALA GLU PHE ILE LYS ARG PHE GLY VAL GLU ASP \ SEQRES 21 A 432 GLY SER VAL GLU GLY LEU ARG ALA GLU VAL ARG LYS ASN \ SEQRES 22 A 432 MSE GLU ARG GLU LEU LYS SER ALA ILE ARG ASN ARG VAL \ SEQRES 23 A 432 LYS SER GLN ALA ILE GLU GLY LEU VAL LYS ALA ASN ASP \ SEQRES 24 A 432 ILE ASP VAL PRO ALA ALA LEU ILE ASP SER GLU ILE ASP \ SEQRES 25 A 432 VAL LEU ARG ARG GLN ALA ALA GLN ARG PHE GLY GLY ASN \ SEQRES 26 A 432 GLU LYS GLN ALA LEU GLU LEU PRO ARG GLU LEU PHE GLU \ SEQRES 27 A 432 GLU GLN ALA LYS ARG ARG VAL VAL VAL GLY LEU LEU LEU \ SEQRES 28 A 432 GLY GLU VAL ILE ARG THR ASN GLU LEU LYS ALA ASP GLU \ SEQRES 29 A 432 GLU ARG VAL LYS GLY LEU ILE GLU GLU MSE ALA SER ALA \ SEQRES 30 A 432 TYR GLU ASP PRO LYS GLU VAL ILE GLU PHE TYR SER LYS \ SEQRES 31 A 432 ASN LYS GLU LEU MSE ASP ASN MSE ARG ASN VAL ALA LEU \ SEQRES 32 A 432 GLU GLU GLN ALA VAL GLU ALA VAL LEU ALA LYS ALA LYS \ SEQRES 33 A 432 VAL THR GLU LYS GLU THR THR PHE ASN GLU LEU MSE ASN \ SEQRES 34 A 432 GLN GLN ALA \ SEQRES 1 B 100 MET ILE ARG GLU GLU ARG LEU LEU LYS VAL LEU ARG ALA \ SEQRES 2 B 100 PRO HIS VAL SER GLU LYS ALA SER THR ALA MET GLU LYS \ SEQRES 3 B 100 SER ASN THR ILE VAL LEU LYS VAL ALA LYS ASP ALA THR \ SEQRES 4 B 100 LYS ALA GLU ILE LYS ALA ALA VAL GLN LYS LEU PHE GLU \ SEQRES 5 B 100 VAL GLU VAL GLU VAL VAL ASN THR LEU VAL VAL LYS GLY \ SEQRES 6 B 100 LYS VAL LYS ARG HIS GLY GLN ARG ILE GLY ARG ARG SER \ SEQRES 7 B 100 ASP TRP LYS LYS ALA TYR VAL THR LEU LYS GLU GLY GLN \ SEQRES 8 B 100 ASN LEU ASP PHE VAL GLY GLY ALA GLU \ SEQRES 1 C 103 ALA ALA LYS ILE ARG ARG ASP ASP GLU VAL ILE VAL LEU \ SEQRES 2 C 103 THR GLY LYS ASP LYS GLY LYS ARG GLY LYS VAL LYS ASN \ SEQRES 3 C 103 VAL LEU SER SER GLY LYS VAL ILE VAL GLU GLY ILE ASN \ SEQRES 4 C 103 LEU VAL LYS LYS HIS GLN LYS PRO VAL PRO ALA LEU ASN \ SEQRES 5 C 103 GLN PRO GLY GLY ILE VAL GLU LYS GLU ALA ALA ILE GLN \ SEQRES 6 C 103 VAL SER ASN VAL ALA ILE PHE ASN ALA ALA THR GLY LYS \ SEQRES 7 C 103 ALA ASP ARG VAL GLY PHE ARG PHE GLU ASP GLY LYS LYS \ SEQRES 8 C 103 VAL ARG PHE PHE LYS SER ASN SER GLU THR ILE LYS \ SEQRES 1 D 63 MET LYS ALA LYS GLU LEU ARG GLU LYS SER VAL GLU GLU \ SEQRES 2 D 63 LEU ASN THR GLU LEU LEU ASN LEU LEU ARG GLU GLN PHE \ SEQRES 3 D 63 ASN LEU ARG MET GLN ALA ALA SER GLY GLN LEU GLN GLN \ SEQRES 4 D 63 SER HIS LEU LEU LYS GLN VAL ARG ARG ASP VAL ALA ARG \ SEQRES 5 D 63 VAL LYS THR LEU LEU ASN GLU LYS ALA GLY ALA \ MODRES 2VRH MSE A 1 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 51 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 71 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 140 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 189 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 194 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 274 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 374 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 395 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 398 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 428 MET SELENOMETHIONINE \ HET MSE A 1 1 \ HET MSE A 51 1 \ HET MSE A 71 1 \ HET MSE A 140 1 \ HET MSE A 189 1 \ HET MSE A 194 1 \ HET MSE A 274 1 \ HET MSE A 374 1 \ HET MSE A 395 1 \ HET MSE A 398 1 \ HET MSE A 428 1 \ HETNAM MSE SELENOMETHIONINE \ FORMUL 1 MSE 11(C5 H11 N O2 SE) \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 432 GLN A 431 \ ATOM 433 CA MET B 1 494.212 404.213 460.642 1.00 20.00 C \ ATOM 434 CA ILE B 2 491.009 403.466 459.371 1.00 20.00 C \ ATOM 435 CA ARG B 3 493.140 402.124 456.443 1.00 20.00 C \ ATOM 436 CA GLU B 4 490.633 399.315 456.658 1.00 20.00 C \ ATOM 437 CA GLU B 5 489.072 399.513 453.241 1.00 20.00 C \ ATOM 438 CA ARG B 6 490.988 399.085 450.012 1.00 20.00 C \ ATOM 439 CA LEU B 7 493.685 401.753 450.302 1.00 20.00 C \ ATOM 440 CA LEU B 8 495.785 398.966 448.808 1.00 20.00 C \ ATOM 441 CA LYS B 9 495.040 399.863 445.181 1.00 20.00 C \ ATOM 442 CA VAL B 10 492.608 402.764 444.875 1.00 20.00 C \ ATOM 443 CA LEU B 11 495.084 404.665 442.699 1.00 20.00 C \ ATOM 444 CA ARG B 12 497.113 403.603 439.635 1.00 20.00 C \ ATOM 445 CA ALA B 13 498.600 404.909 436.379 1.00 20.00 C \ ATOM 446 CA PRO B 14 499.205 408.613 435.596 1.00 20.00 C \ ATOM 447 CA HIS B 15 497.786 410.109 432.404 1.00 20.00 C \ ATOM 448 CA VAL B 16 500.442 412.276 430.771 1.00 20.00 C \ ATOM 449 CA SER B 17 497.595 413.885 428.858 1.00 20.00 C \ ATOM 450 CA GLU B 18 497.502 417.356 427.338 1.00 20.00 C \ ATOM 451 CA LYS B 19 496.109 418.502 430.680 1.00 20.00 C \ ATOM 452 CA ALA B 20 499.436 417.365 432.129 1.00 20.00 C \ ATOM 453 CA SER B 21 501.950 420.118 432.913 1.00 20.00 C \ ATOM 454 CA THR B 22 499.380 422.560 431.541 1.00 20.00 C \ ATOM 455 CA ALA B 23 497.381 422.163 434.744 1.00 20.00 C \ ATOM 456 CA MET B 24 500.026 423.505 437.155 1.00 20.00 C \ ATOM 457 CA GLU B 25 499.568 426.875 438.851 1.00 20.00 C \ ATOM 458 CA LYS B 26 499.842 427.328 442.608 1.00 20.00 C \ ATOM 459 CA SER B 27 499.421 423.567 442.926 1.00 20.00 C \ ATOM 460 CA ASN B 28 500.368 420.649 440.751 1.00 20.00 C \ ATOM 461 CA THR B 29 497.482 418.217 440.878 1.00 20.00 C \ ATOM 462 CA ILE B 30 497.273 414.858 439.232 1.00 20.00 C \ ATOM 463 CA VAL B 31 495.144 412.487 437.201 1.00 20.00 C \ ATOM 464 CA LEU B 32 495.637 408.830 438.036 1.00 20.00 C \ ATOM 465 CA LYS B 33 493.591 406.220 436.212 1.00 20.00 C \ ATOM 466 CA VAL B 34 491.961 405.567 439.602 1.00 20.00 C \ ATOM 467 CA ALA B 35 489.770 402.472 439.919 1.00 20.00 C \ ATOM 468 CA LYS B 36 486.147 402.800 438.791 1.00 20.00 C \ ATOM 469 CA ASP B 37 485.111 402.892 442.456 1.00 20.00 C \ ATOM 470 CA ALA B 38 487.658 404.512 444.756 1.00 20.00 C \ ATOM 471 CA THR B 39 485.562 407.464 445.924 1.00 20.00 C \ ATOM 472 CA LYS B 40 487.176 410.780 446.844 1.00 20.00 C \ ATOM 473 CA ALA B 41 488.105 410.252 450.498 1.00 20.00 C \ ATOM 474 CA GLU B 42 489.887 406.958 449.796 1.00 20.00 C \ ATOM 475 CA ILE B 43 491.755 408.709 446.984 1.00 20.00 C \ ATOM 476 CA LYS B 44 492.759 411.576 449.270 1.00 20.00 C \ ATOM 477 CA ALA B 45 494.226 409.005 451.660 1.00 20.00 C \ ATOM 478 CA ALA B 46 495.743 406.821 448.946 1.00 20.00 C \ ATOM 479 CA VAL B 47 498.181 409.573 448.058 1.00 20.00 C \ ATOM 480 CA GLN B 48 498.745 410.092 451.784 1.00 20.00 C \ ATOM 481 CA LYS B 49 500.527 406.869 452.757 1.00 20.00 C \ ATOM 482 CA LEU B 50 502.050 406.628 449.284 1.00 20.00 C \ ATOM 483 CA PHE B 51 503.644 409.404 447.202 1.00 20.00 C \ ATOM 484 CA GLU B 52 504.065 411.107 450.598 1.00 20.00 C \ ATOM 485 CA VAL B 53 502.508 414.334 449.306 1.00 20.00 C \ ATOM 486 CA GLU B 54 499.890 416.636 450.873 1.00 20.00 C \ ATOM 487 CA VAL B 55 496.524 416.503 449.106 1.00 20.00 C \ ATOM 488 CA GLU B 56 494.193 419.500 449.400 1.00 20.00 C \ ATOM 489 CA VAL B 57 491.160 418.144 447.572 1.00 20.00 C \ ATOM 490 CA VAL B 58 489.989 415.506 445.074 1.00 20.00 C \ ATOM 491 CA ASN B 59 487.430 415.647 442.236 1.00 20.00 C \ ATOM 492 CA THR B 60 487.316 412.678 439.834 1.00 20.00 C \ ATOM 493 CA LEU B 61 484.670 411.623 437.297 1.00 20.00 C \ ATOM 494 CA VAL B 62 484.259 408.803 434.743 1.00 20.00 C \ ATOM 495 CA VAL B 63 484.985 409.074 430.982 1.00 20.00 C \ ATOM 496 CA LYS B 64 483.668 406.189 428.831 1.00 20.00 C \ ATOM 497 CA GLY B 65 485.330 404.298 425.974 1.00 20.00 C \ ATOM 498 CA LYS B 66 483.169 403.069 423.079 1.00 20.00 C \ ATOM 499 CA VAL B 67 484.201 401.517 419.775 1.00 20.00 C \ ATOM 500 CA LYS B 68 483.181 398.908 417.246 1.00 20.00 C \ ATOM 501 CA ARG B 69 485.607 396.031 416.787 1.00 20.00 C \ ATOM 502 CA HIS B 70 484.786 392.406 416.021 1.00 20.00 C \ ATOM 503 CA GLY B 71 485.153 389.394 413.765 1.00 20.00 C \ ATOM 504 CA GLN B 72 482.465 391.200 411.792 1.00 20.00 C \ ATOM 505 CA ARG B 73 480.627 394.044 413.525 1.00 20.00 C \ ATOM 506 CA ILE B 74 480.116 394.396 417.285 1.00 20.00 C \ ATOM 507 CA GLY B 75 482.731 396.013 419.519 1.00 20.00 C \ ATOM 508 CA ARG B 76 482.010 397.937 422.706 1.00 20.00 C \ ATOM 509 CA ARG B 77 482.946 400.468 425.387 1.00 20.00 C \ ATOM 510 CA SER B 78 485.731 400.317 427.994 1.00 20.00 C \ ATOM 511 CA ASP B 79 485.151 402.679 430.989 1.00 20.00 C \ ATOM 512 CA TRP B 80 487.528 404.517 433.381 1.00 20.00 C \ ATOM 513 CA LYS B 81 487.650 407.098 436.187 1.00 20.00 C \ ATOM 514 CA LYS B 82 489.815 410.222 436.049 1.00 20.00 C \ ATOM 515 CA ALA B 83 490.867 412.015 439.241 1.00 20.00 C \ ATOM 516 CA TYR B 84 492.555 415.417 439.375 1.00 20.00 C \ ATOM 517 CA VAL B 85 493.199 415.771 443.105 1.00 20.00 C \ ATOM 518 CA THR B 86 495.194 418.834 444.131 1.00 20.00 C \ ATOM 519 CA LEU B 87 498.257 418.840 446.375 1.00 20.00 C \ ATOM 520 CA LYS B 88 499.975 422.027 447.558 1.00 20.00 C \ ATOM 521 CA GLU B 89 502.887 424.327 446.697 1.00 20.00 C \ ATOM 522 CA GLY B 90 505.697 424.082 449.244 1.00 20.00 C \ ATOM 523 CA GLN B 91 506.273 420.483 448.160 1.00 20.00 C \ ATOM 524 CA ASN B 92 507.367 419.631 444.619 1.00 20.00 C \ ATOM 525 CA LEU B 93 507.900 416.233 443.010 1.00 20.00 C \ ATOM 526 CA ASP B 94 511.116 415.934 445.035 1.00 20.00 C \ ATOM 527 CA PHE B 95 513.052 412.678 444.826 1.00 20.00 C \ ATOM 528 CA VAL B 96 510.967 410.693 442.352 1.00 20.00 C \ ATOM 529 CA GLY B 97 510.737 409.603 438.736 1.00 20.00 C \ ATOM 530 CA GLY B 98 508.439 411.647 436.540 1.00 20.00 C \ ATOM 531 CA ALA B 99 506.945 410.084 433.420 1.00 20.00 C \ TER 532 ALA B 99 \ TER 635 ILE C 102 \ TER 699 ALA D 63 \ MASTER 150 0 11 0 0 0 0 6 695 4 0 55 \ END \ """, "2vrhchainB") cmd.hide("all") cmd.color('grey70', "2vrhchainB") cmd.show('cartoon', "2vrhchainB") cmd.center("2vrhchainB", state=0, origin=1) cmd.zoom("2vrhchainB", animate=-1) cmd.select("e2vrhB1", "c. B & i. 6-99") cmd.color("red", "e2vrhB1") cmd.disable("e2vrhB1")