cmd.read_pdbstr("""\ HEADER PROTEIN TRANSPORT 12-APR-10 3MJH \ TITLE CRYSTAL STRUCTURE OF HUMAN RAB5A IN COMPLEX WITH THE C2H2 ZINC FINGER \ TITLE 2 OF EEA1 \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-5A; \ COMPND 3 CHAIN: A, C; \ COMPND 4 FRAGMENT: RESIDUES 16-183; \ COMPND 5 EC: 3.6.5.2; \ COMPND 6 ENGINEERED: YES; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: EARLY ENDOSOME ANTIGEN 1; \ COMPND 9 CHAIN: B, D; \ COMPND 10 FRAGMENT: C2H2-TYPE, RESIDUES 36-69; \ COMPND 11 SYNONYM: ENDOSOME-ASSOCIATED PROTEIN P162, ZINC FINGER FYVE DOMAIN- \ COMPND 12 CONTAINING PROTEIN 2; \ COMPND 13 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 3 ORGANISM_COMMON: HUMAN; \ SOURCE 4 ORGANISM_TAXID: 9606; \ SOURCE 5 GENE: RAB5, RAB5A; \ SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K12, BL21 (DE3)CODON PLUS RIL CELLS; \ SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; \ SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET15B, MODIFIED PET28A,PGEX; \ SOURCE 11 MOL_ID: 2; \ SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 13 ORGANISM_COMMON: HUMAN; \ SOURCE 14 ORGANISM_TAXID: 9606; \ SOURCE 15 GENE: EARLY ENDOSOMAL ANTIGEN1(EEA1), EEA1, ZFYVE2; \ SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 18 EXPRESSION_SYSTEM_STRAIN: K12, BL21(DE3)CODON PLUS RIL CELLS; \ SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; \ SOURCE 20 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET15B \ KEYWDS PROTEIN-ZINC FINGER COMPLEX, BETA BETA ALPHA FOLD, BETA HAIRPIN, \ KEYWDS 2 RAB5A GTPASE, EEA1, PROTEIN TRANSPORT \ EXPDTA X-RAY DIFFRACTION \ AUTHOR A.K.MISHRA,S.EATHIRAJ,D.G.LAMBRIGHT \ REVDAT 5 04-MAR-26 3MJH 1 REMARK \ REVDAT 4 21-FEB-24 3MJH 1 REMARK \ REVDAT 3 06-OCT-21 3MJH 1 REMARK SEQADV LINK \ REVDAT 2 14-JUL-10 3MJH 1 JRNL \ REVDAT 1 05-MAY-10 3MJH 0 \ JRNL AUTH A.MISHRA,S.EATHIRAJ,S.CORVERA,D.G.LAMBRIGHT \ JRNL TITL STRUCTURAL BASIS FOR RAB GTPASE RECOGNITION AND ENDOSOME \ JRNL TITL 2 TETHERING BY THE C2H2 ZINC FINGER OF EARLY ENDOSOMAL \ JRNL TITL 3 AUTOANTIGEN 1 (EEA1). \ JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 10866 2010 \ JRNL REFN ISSN 0027-8424 \ JRNL PMID 20534488 \ JRNL DOI 10.1073/PNAS.1000843107 \ REMARK 2 \ REMARK 2 RESOLUTION. 2.03 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.3.0037 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 89.0 \ REMARK 3 NUMBER OF REFLECTIONS : 21886 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 \ REMARK 3 R VALUE (WORKING SET) : 0.192 \ REMARK 3 FREE R VALUE : 0.260 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 1157 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : 20 \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 1174 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.10 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 \ REMARK 3 BIN FREE R VALUE SET COUNT : 68 \ REMARK 3 BIN FREE R VALUE : 0.3370 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 3138 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 68 \ REMARK 3 SOLVENT ATOMS : 312 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : 35.34 \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.19 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 2.53000 \ REMARK 3 B22 (A**2) : -1.26000 \ REMARK 3 B33 (A**2) : -1.27000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : 0.00000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.275 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.223 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.351 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3253 ; 0.009 ; 0.022 \ REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4404 ; 1.203 ; 1.969 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 398 ; 5.839 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;38.652 ;25.168 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 555 ;15.684 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;13.815 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 488 ; 0.081 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2416 ; 0.004 ; 0.020 \ REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1534 ; 0.203 ; 0.200 \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2201 ; 0.299 ; 0.200 \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 261 ; 0.122 ; 0.200 \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.091 ; 0.200 \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 72 ; 0.217 ; 0.200 \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.218 ; 0.200 \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2046 ; 0.608 ; 1.500 \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3184 ; 1.037 ; 2.000 \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1389 ; 1.417 ; 3.000 \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1220 ; 2.213 ; 4.500 \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : BABINET MODEL WITH MASK \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING \ REMARK 3 POSITIONS \ REMARK 4 \ REMARK 4 3MJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-10. \ REMARK 100 THE DEPOSITION ID IS D_1000058621. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 06-DEC-07 \ REMARK 200 TEMPERATURE (KELVIN) : 298 \ REMARK 200 PH : 5.0 \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : N \ REMARK 200 RADIATION SOURCE : ROTATING ANODE \ REMARK 200 BEAMLINE : NULL \ REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 \ REMARK 200 MONOCHROMATOR : OSMIC MIRRORS \ REMARK 200 OPTICS : MIRRORS \ REMARK 200 \ REMARK 200 DETECTOR TYPE : IMAGE PLATE \ REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO \ REMARK 200 DATA SCALING SOFTWARE : SCALEPACK \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27931 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 \ REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 \ REMARK 200 DATA REDUNDANCY : 4.500 \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : 0.04200 \ REMARK 200 FOR THE DATA SET : 44.7000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: AMORE \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 42.72 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 4000, 50MM SODIUM ACETATE, \ REMARK 280 0.2M SODIUM-POTASSIUM PHOSPHATE, 10% GLYCEROL, PH 5.0, VAPOR \ REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291.0K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X+1/2,-Y,Z+1/2 \ REMARK 290 3555 -X,Y+1/2,-Z+1/2 \ REMARK 290 4555 X+1/2,-Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.20600 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.74750 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.19900 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.74750 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.20600 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.19900 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 9870 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 9960 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 ASN C 16 \ REMARK 465 SER D 36 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 ASP A 66 -1.65 72.21 \ REMARK 500 LEU A 137 39.23 -98.84 \ REMARK 500 SER A 167 1.35 95.16 \ REMARK 500 ASN B 68 -163.81 -163.27 \ REMARK 500 GLN C 121 72.27 -161.83 \ REMARK 500 ALA C 122 -177.22 -172.16 \ REMARK 500 LEU C 137 50.58 -97.09 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 620 \ REMARK 620 METAL COORDINATION \ REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 MG A 201 MG \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 SER A 34 OG \ REMARK 620 2 THR A 52 OG1 82.4 \ REMARK 620 3 GTP A 200 O2G 170.8 89.9 \ REMARK 620 4 GTP A 200 O2B 92.3 174.6 95.2 \ REMARK 620 5 HOH A 302 O 91.2 91.4 93.9 90.1 \ REMARK 620 6 HOH A 306 O 84.0 87.5 90.8 90.6 175.2 \ REMARK 620 N 1 2 3 4 5 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 ZN B 70 ZN \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 CYS B 43 SG \ REMARK 620 2 CYS B 46 SG 119.8 \ REMARK 620 3 HIS B 59 NE2 105.3 111.3 \ REMARK 620 4 HIS B 64 NE2 96.2 117.7 104.7 \ REMARK 620 N 1 2 3 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 MG C 201 MG \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 SER C 34 OG \ REMARK 620 2 THR C 52 OG1 79.8 \ REMARK 620 3 GTP C 200 O2B 92.5 172.0 \ REMARK 620 4 GTP C 200 O2G 169.8 90.1 97.6 \ REMARK 620 5 HOH C 272 O 89.9 87.3 90.8 90.7 \ REMARK 620 6 HOH C 274 O 81.0 88.7 92.1 97.9 170.5 \ REMARK 620 N 1 2 3 4 5 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 ZN D 70 ZN \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 CYS D 43 SG \ REMARK 620 2 CYS D 46 SG 117.0 \ REMARK 620 3 HIS D 59 NE2 103.4 109.5 \ REMARK 620 4 HIS D 64 NE2 103.4 112.6 110.3 \ REMARK 620 N 1 2 3 \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: AC1 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 200 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC2 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC3 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 70 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC4 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP C 200 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC5 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC6 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 70 \ DBREF 3MJH A 16 183 UNP P20339 RAB5A_HUMAN 16 183 \ DBREF 3MJH B 36 69 UNP Q15075 EEA1_HUMAN 36 69 \ DBREF 3MJH C 16 183 UNP P20339 RAB5A_HUMAN 16 183 \ DBREF 3MJH D 36 69 UNP Q15075 EEA1_HUMAN 36 69 \ SEQADV 3MJH LEU A 79 UNP P20339 GLN 79 ENGINEERED MUTATION \ SEQADV 3MJH LEU C 79 UNP P20339 GLN 79 ENGINEERED MUTATION \ SEQRES 1 A 168 ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU GLY GLU \ SEQRES 2 A 168 SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG PHE VAL \ SEQRES 3 A 168 LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR ILE GLY \ SEQRES 4 A 168 ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP ASP THR \ SEQRES 5 A 168 THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY LEU GLU \ SEQRES 6 A 168 ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG GLY ALA \ SEQRES 7 A 168 GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN GLU GLU \ SEQRES 8 A 168 SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU LEU GLN \ SEQRES 9 A 168 ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SER GLY \ SEQRES 10 A 168 ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL ASP PHE \ SEQRES 11 A 168 GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER LEU LEU \ SEQRES 12 A 168 PHE MET GLU THR SER ALA LYS THR SER MET ASN VAL ASN \ SEQRES 13 A 168 GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO LYS \ SEQRES 1 B 34 SER SER SER GLU GLY PHE ILE CYS PRO GLN CYS MET LYS \ SEQRES 2 B 34 SER LEU GLY SER ALA ASP GLU LEU PHE LYS HIS TYR GLU \ SEQRES 3 B 34 ALA VAL HIS ASP ALA GLY ASN ASP \ SEQRES 1 C 168 ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU GLY GLU \ SEQRES 2 C 168 SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG PHE VAL \ SEQRES 3 C 168 LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR ILE GLY \ SEQRES 4 C 168 ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP ASP THR \ SEQRES 5 C 168 THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY LEU GLU \ SEQRES 6 C 168 ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG GLY ALA \ SEQRES 7 C 168 GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN GLU GLU \ SEQRES 8 C 168 SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU LEU GLN \ SEQRES 9 C 168 ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SER GLY \ SEQRES 10 C 168 ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL ASP PHE \ SEQRES 11 C 168 GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER LEU LEU \ SEQRES 12 C 168 PHE MET GLU THR SER ALA LYS THR SER MET ASN VAL ASN \ SEQRES 13 C 168 GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO LYS \ SEQRES 1 D 34 SER SER SER GLU GLY PHE ILE CYS PRO GLN CYS MET LYS \ SEQRES 2 D 34 SER LEU GLY SER ALA ASP GLU LEU PHE LYS HIS TYR GLU \ SEQRES 3 D 34 ALA VAL HIS ASP ALA GLY ASN ASP \ HET GTP A 200 32 \ HET MG A 201 1 \ HET ZN B 70 1 \ HET GTP C 200 32 \ HET MG C 201 1 \ HET ZN D 70 1 \ HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE \ HETNAM MG MAGNESIUM ION \ HETNAM ZN ZINC ION \ FORMUL 5 GTP 2(C10 H16 N5 O14 P3) \ FORMUL 6 MG 2(MG 2+) \ FORMUL 7 ZN 2(ZN 2+) \ FORMUL 11 HOH *312(H2 O) \ HELIX 1 1 GLY A 32 GLY A 43 1 12 \ HELIX 2 2 LEU A 79 SER A 84 5 6 \ HELIX 3 3 LEU A 85 ARG A 91 1 7 \ HELIX 4 4 ASN A 104 ALA A 122 1 19 \ HELIX 5 5 LYS A 134 ARG A 141 5 8 \ HELIX 6 6 ASP A 144 ASP A 154 1 11 \ HELIX 7 7 ASN A 169 LEU A 181 1 13 \ HELIX 8 8 SER B 52 HIS B 64 1 13 \ HELIX 9 9 GLY C 32 GLY C 43 1 12 \ HELIX 10 10 LEU C 79 SER C 84 5 6 \ HELIX 11 11 LEU C 85 ARG C 91 1 7 \ HELIX 12 12 ASN C 104 GLN C 121 1 18 \ HELIX 13 13 LEU C 137 ARG C 141 5 5 \ HELIX 14 14 ASP C 144 ASN C 155 1 12 \ HELIX 15 15 ASN C 169 LEU C 181 1 13 \ HELIX 16 16 SER D 52 HIS D 64 1 13 \ SHEET 1 A 8 LEU A 158 GLU A 161 0 \ SHEET 2 A 8 VAL A 127 ASN A 133 1 N LEU A 130 O LEU A 158 \ SHEET 3 A 8 ALA A 95 ASP A 101 1 N ALA A 96 O ALA A 129 \ SHEET 4 A 8 LYS A 17 LEU A 26 1 N LEU A 26 O VAL A 99 \ SHEET 5 A 8 THR A 67 THR A 76 1 O LYS A 70 N CYS A 19 \ SHEET 6 A 8 ALA A 55 LEU A 64 -1 N LEU A 58 O ILE A 73 \ SHEET 7 A 8 GLU B 39 ILE B 42 -1 O GLY B 40 N ALA A 55 \ SHEET 8 A 8 SER B 49 LEU B 50 -1 O LEU B 50 N PHE B 41 \ SHEET 1 B 8 LEU C 158 GLU C 161 0 \ SHEET 2 B 8 VAL C 127 ASN C 133 1 N LEU C 130 O LEU C 158 \ SHEET 3 B 8 ALA C 95 ASP C 101 1 N ALA C 96 O ALA C 129 \ SHEET 4 B 8 ILE C 18 LEU C 26 1 N VAL C 24 O ILE C 97 \ SHEET 5 B 8 THR C 68 THR C 76 1 O GLU C 72 N LEU C 23 \ SHEET 6 B 8 ALA C 55 CYS C 63 -1 N LEU C 58 O ILE C 73 \ SHEET 7 B 8 GLU D 39 ILE D 42 -1 O GLY D 40 N ALA C 55 \ SHEET 8 B 8 SER D 49 LEU D 50 -1 O LEU D 50 N PHE D 41 \ LINK OG SER A 34 MG MG A 201 1555 1555 2.19 \ LINK OG1 THR A 52 MG MG A 201 1555 1555 2.03 \ LINK O2G GTP A 200 MG MG A 201 1555 1555 2.03 \ LINK O2B GTP A 200 MG MG A 201 1555 1555 2.10 \ LINK MG MG A 201 O HOH A 302 1555 1555 2.03 \ LINK MG MG A 201 O HOH A 306 1555 1555 2.31 \ LINK SG CYS B 43 ZN ZN B 70 1555 1555 2.27 \ LINK SG CYS B 46 ZN ZN B 70 1555 1555 2.28 \ LINK NE2 HIS B 59 ZN ZN B 70 1555 1555 2.05 \ LINK NE2 HIS B 64 ZN ZN B 70 1555 1555 2.26 \ LINK OG SER C 34 MG MG C 201 1555 1555 2.05 \ LINK OG1 THR C 52 MG MG C 201 1555 1555 2.25 \ LINK O2B GTP C 200 MG MG C 201 1555 1555 1.98 \ LINK O2G GTP C 200 MG MG C 201 1555 1555 2.05 \ LINK MG MG C 201 O HOH C 272 1555 1555 2.18 \ LINK MG MG C 201 O HOH C 274 1555 1555 2.10 \ LINK SG CYS D 43 ZN ZN D 70 1555 1555 2.32 \ LINK SG CYS D 46 ZN ZN D 70 1555 1555 2.43 \ LINK NE2 HIS D 59 ZN ZN D 70 1555 1555 1.96 \ LINK NE2 HIS D 64 ZN ZN D 70 1555 1555 2.07 \ SITE 1 AC1 26 HOH A 6 SER A 29 ALA A 30 VAL A 31 \ SITE 2 AC1 26 GLY A 32 LYS A 33 SER A 34 SER A 35 \ SITE 3 AC1 26 PHE A 45 HIS A 46 GLU A 47 GLN A 49 \ SITE 4 AC1 26 SER A 51 THR A 52 GLY A 78 ASN A 133 \ SITE 5 AC1 26 LYS A 134 ASP A 136 SER A 163 ALA A 164 \ SITE 6 AC1 26 LYS A 165 HOH A 196 MG A 201 HOH A 259 \ SITE 7 AC1 26 HOH A 302 HOH A 306 \ SITE 1 AC2 5 SER A 34 THR A 52 GTP A 200 HOH A 302 \ SITE 2 AC2 5 HOH A 306 \ SITE 1 AC3 4 CYS B 43 CYS B 46 HIS B 59 HIS B 64 \ SITE 1 AC4 26 HOH C 12 SER C 29 ALA C 30 VAL C 31 \ SITE 2 AC4 26 GLY C 32 LYS C 33 SER C 34 SER C 35 \ SITE 3 AC4 26 PHE C 45 HIS C 46 GLU C 47 GLN C 49 \ SITE 4 AC4 26 THR C 52 GLY C 78 ASN C 133 LYS C 134 \ SITE 5 AC4 26 ASP C 136 LEU C 137 SER C 163 ALA C 164 \ SITE 6 AC4 26 LYS C 165 HOH C 193 MG C 201 HOH C 272 \ SITE 7 AC4 26 HOH C 274 HOH C 306 \ SITE 1 AC5 5 SER C 34 THR C 52 GTP C 200 HOH C 272 \ SITE 2 AC5 5 HOH C 274 \ SITE 1 AC6 4 CYS D 43 CYS D 46 HIS D 59 HIS D 64 \ CRYST1 46.412 80.398 103.495 90.00 90.00 90.00 P 21 21 21 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.021546 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.012438 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.009662 0.00000 \ TER 1322 LYS A 183 \ ATOM 1323 N SER B 36 39.088 38.294 10.677 1.00 52.07 N \ ATOM 1324 CA SER B 36 37.701 38.007 11.148 1.00 51.98 C \ ATOM 1325 C SER B 36 36.671 38.403 10.099 1.00 51.54 C \ ATOM 1326 O SER B 36 36.435 39.591 9.876 1.00 51.58 O \ ATOM 1327 CB SER B 36 37.406 38.750 12.447 1.00 52.05 C \ ATOM 1328 OG SER B 36 36.029 38.630 12.761 1.00 53.45 O \ ATOM 1329 N SER B 37 36.050 37.402 9.481 1.00 50.93 N \ ATOM 1330 CA SER B 37 35.130 37.614 8.365 1.00 50.68 C \ ATOM 1331 C SER B 37 33.959 38.509 8.748 1.00 50.19 C \ ATOM 1332 O SER B 37 33.448 38.433 9.868 1.00 50.35 O \ ATOM 1333 CB SER B 37 34.611 36.277 7.829 1.00 50.65 C \ ATOM 1334 OG SER B 37 33.672 36.483 6.785 1.00 51.50 O \ ATOM 1335 N SER B 38 33.542 39.354 7.810 1.00 49.62 N \ ATOM 1336 CA SER B 38 32.410 40.247 8.035 1.00 49.09 C \ ATOM 1337 C SER B 38 31.097 39.511 7.791 1.00 48.77 C \ ATOM 1338 O SER B 38 30.027 40.107 7.895 1.00 48.81 O \ ATOM 1339 CB SER B 38 32.500 41.481 7.133 1.00 49.31 C \ ATOM 1340 OG SER B 38 32.131 41.168 5.798 1.00 48.99 O \ ATOM 1341 N GLU B 39 31.196 38.219 7.462 1.00 47.96 N \ ATOM 1342 CA GLU B 39 30.043 37.360 7.221 1.00 47.15 C \ ATOM 1343 C GLU B 39 30.268 35.973 7.824 1.00 46.67 C \ ATOM 1344 O GLU B 39 31.369 35.412 7.760 1.00 46.99 O \ ATOM 1345 CB GLU B 39 29.748 37.239 5.724 1.00 47.29 C \ ATOM 1346 CG GLU B 39 28.405 36.558 5.408 1.00 48.01 C \ ATOM 1347 CD GLU B 39 28.328 35.980 4.004 1.00 48.16 C \ ATOM 1348 OE1 GLU B 39 28.614 36.711 3.040 1.00 49.10 O \ ATOM 1349 OE2 GLU B 39 27.966 34.789 3.865 1.00 49.13 O \ ATOM 1350 N GLY B 40 29.208 35.429 8.401 1.00 45.34 N \ ATOM 1351 CA GLY B 40 29.236 34.096 8.973 1.00 44.11 C \ ATOM 1352 C GLY B 40 28.429 34.112 10.244 1.00 43.16 C \ ATOM 1353 O GLY B 40 27.597 35.011 10.459 1.00 42.92 O \ ATOM 1354 N PHE B 41 28.693 33.136 11.105 1.00 41.64 N \ ATOM 1355 CA PHE B 41 28.051 33.084 12.403 1.00 39.81 C \ ATOM 1356 C PHE B 41 28.718 34.042 13.401 1.00 39.07 C \ ATOM 1357 O PHE B 41 29.276 33.635 14.421 1.00 38.90 O \ ATOM 1358 CB PHE B 41 27.957 31.628 12.886 1.00 39.71 C \ ATOM 1359 CG PHE B 41 27.317 30.702 11.870 1.00 38.63 C \ ATOM 1360 CD1 PHE B 41 25.941 30.744 11.634 1.00 38.33 C \ ATOM 1361 CD2 PHE B 41 28.096 29.811 11.132 1.00 37.93 C \ ATOM 1362 CE1 PHE B 41 25.350 29.896 10.691 1.00 38.87 C \ ATOM 1363 CE2 PHE B 41 27.521 28.960 10.189 1.00 38.70 C \ ATOM 1364 CZ PHE B 41 26.146 28.996 9.965 1.00 38.91 C \ ATOM 1365 N ILE B 42 28.635 35.334 13.080 1.00 38.17 N \ ATOM 1366 CA ILE B 42 29.153 36.421 13.926 1.00 37.17 C \ ATOM 1367 C ILE B 42 28.190 36.766 15.056 1.00 36.17 C \ ATOM 1368 O ILE B 42 26.984 36.914 14.843 1.00 35.76 O \ ATOM 1369 CB ILE B 42 29.399 37.719 13.119 1.00 37.48 C \ ATOM 1370 CG1 ILE B 42 30.310 37.452 11.924 1.00 38.21 C \ ATOM 1371 CG2 ILE B 42 30.007 38.811 14.003 1.00 37.05 C \ ATOM 1372 CD1 ILE B 42 30.050 38.383 10.786 1.00 40.34 C \ ATOM 1373 N CYS B 43 28.738 36.906 16.254 1.00 35.06 N \ ATOM 1374 CA CYS B 43 27.970 37.394 17.387 1.00 35.25 C \ ATOM 1375 C CYS B 43 27.782 38.898 17.240 1.00 35.11 C \ ATOM 1376 O CYS B 43 28.765 39.636 17.210 1.00 35.28 O \ ATOM 1377 CB CYS B 43 28.678 37.067 18.703 1.00 34.98 C \ ATOM 1378 SG CYS B 43 27.879 37.792 20.132 1.00 33.89 S \ ATOM 1379 N PRO B 44 26.527 39.358 17.110 1.00 35.52 N \ ATOM 1380 CA PRO B 44 26.310 40.810 16.981 1.00 35.94 C \ ATOM 1381 C PRO B 44 26.731 41.653 18.203 1.00 36.50 C \ ATOM 1382 O PRO B 44 26.922 42.862 18.069 1.00 35.98 O \ ATOM 1383 CB PRO B 44 24.809 40.930 16.702 1.00 35.37 C \ ATOM 1384 CG PRO B 44 24.216 39.667 17.179 1.00 36.28 C \ ATOM 1385 CD PRO B 44 25.266 38.599 17.019 1.00 35.66 C \ ATOM 1386 N GLN B 45 26.907 41.018 19.363 1.00 37.05 N \ ATOM 1387 CA GLN B 45 27.273 41.730 20.590 1.00 38.17 C \ ATOM 1388 C GLN B 45 28.764 42.031 20.735 1.00 38.49 C \ ATOM 1389 O GLN B 45 29.148 43.124 21.174 1.00 38.91 O \ ATOM 1390 CB GLN B 45 26.776 40.960 21.816 1.00 38.56 C \ ATOM 1391 CG GLN B 45 25.317 41.203 22.134 1.00 41.40 C \ ATOM 1392 CD GLN B 45 25.109 42.489 22.914 1.00 45.12 C \ ATOM 1393 OE1 GLN B 45 25.717 42.690 23.968 1.00 47.45 O \ ATOM 1394 NE2 GLN B 45 24.248 43.364 22.403 1.00 45.14 N \ ATOM 1395 N CYS B 46 29.606 41.062 20.400 1.00 38.67 N \ ATOM 1396 CA CYS B 46 31.047 41.269 20.514 1.00 38.76 C \ ATOM 1397 C CYS B 46 31.790 41.036 19.206 1.00 38.94 C \ ATOM 1398 O CYS B 46 33.008 41.128 19.161 1.00 39.05 O \ ATOM 1399 CB CYS B 46 31.632 40.406 21.639 1.00 38.90 C \ ATOM 1400 SG CYS B 46 31.524 38.654 21.332 1.00 37.45 S \ ATOM 1401 N MET B 47 31.049 40.758 18.137 1.00 39.40 N \ ATOM 1402 CA MET B 47 31.632 40.493 16.813 1.00 39.88 C \ ATOM 1403 C MET B 47 32.486 39.216 16.755 1.00 40.14 C \ ATOM 1404 O MET B 47 33.139 38.964 15.753 1.00 39.87 O \ ATOM 1405 CB MET B 47 32.434 41.695 16.285 1.00 39.83 C \ ATOM 1406 CG MET B 47 31.712 43.041 16.304 1.00 40.89 C \ ATOM 1407 SD MET B 47 30.100 43.019 15.517 1.00 43.21 S \ ATOM 1408 CE MET B 47 29.864 44.745 15.127 1.00 40.64 C \ ATOM 1409 N LYS B 48 32.483 38.419 17.826 1.00 40.94 N \ ATOM 1410 CA LYS B 48 33.156 37.109 17.803 1.00 42.05 C \ ATOM 1411 C LYS B 48 32.613 36.261 16.644 1.00 42.19 C \ ATOM 1412 O LYS B 48 31.394 36.132 16.461 1.00 42.03 O \ ATOM 1413 CB LYS B 48 32.998 36.385 19.154 1.00 42.47 C \ ATOM 1414 CG LYS B 48 33.867 35.143 19.338 1.00 43.95 C \ ATOM 1415 CD LYS B 48 33.976 34.778 20.819 1.00 46.34 C \ ATOM 1416 CE LYS B 48 34.630 33.412 21.036 1.00 47.41 C \ ATOM 1417 NZ LYS B 48 36.059 33.363 20.586 1.00 49.60 N \ ATOM 1418 N SER B 49 33.525 35.734 15.834 1.00 42.36 N \ ATOM 1419 CA SER B 49 33.155 34.829 14.759 1.00 42.39 C \ ATOM 1420 C SER B 49 33.232 33.393 15.258 1.00 42.29 C \ ATOM 1421 O SER B 49 34.286 32.938 15.706 1.00 42.06 O \ ATOM 1422 CB SER B 49 34.068 35.012 13.551 1.00 42.54 C \ ATOM 1423 OG SER B 49 33.501 34.394 12.411 1.00 43.72 O \ ATOM 1424 N LEU B 50 32.106 32.685 15.192 1.00 41.85 N \ ATOM 1425 CA LEU B 50 32.065 31.290 15.614 1.00 41.57 C \ ATOM 1426 C LEU B 50 31.871 30.382 14.409 1.00 40.99 C \ ATOM 1427 O LEU B 50 31.404 30.830 13.364 1.00 40.54 O \ ATOM 1428 CB LEU B 50 30.996 31.088 16.695 1.00 41.75 C \ ATOM 1429 CG LEU B 50 31.380 31.980 17.878 1.00 42.13 C \ ATOM 1430 CD1 LEU B 50 30.275 32.959 18.247 1.00 41.46 C \ ATOM 1431 CD2 LEU B 50 31.925 31.223 19.092 1.00 40.98 C \ ATOM 1432 N GLY B 51 32.258 29.114 14.554 1.00 40.53 N \ ATOM 1433 CA GLY B 51 32.363 28.199 13.419 1.00 39.55 C \ ATOM 1434 C GLY B 51 31.055 27.624 12.926 1.00 39.20 C \ ATOM 1435 O GLY B 51 30.961 27.159 11.790 1.00 39.42 O \ ATOM 1436 N SER B 52 30.036 27.648 13.772 1.00 38.37 N \ ATOM 1437 CA SER B 52 28.740 27.103 13.391 1.00 37.56 C \ ATOM 1438 C SER B 52 27.636 27.887 14.075 1.00 36.80 C \ ATOM 1439 O SER B 52 27.909 28.658 14.981 1.00 36.04 O \ ATOM 1440 CB SER B 52 28.659 25.630 13.790 1.00 37.46 C \ ATOM 1441 OG SER B 52 28.628 25.506 15.195 1.00 36.92 O \ ATOM 1442 N ALA B 53 26.396 27.681 13.637 1.00 36.54 N \ ATOM 1443 CA ALA B 53 25.240 28.262 14.315 1.00 36.46 C \ ATOM 1444 C ALA B 53 25.165 27.787 15.766 1.00 36.40 C \ ATOM 1445 O ALA B 53 24.993 28.597 16.670 1.00 35.94 O \ ATOM 1446 CB ALA B 53 23.965 27.947 13.575 1.00 36.23 C \ ATOM 1447 N ASP B 54 25.333 26.482 15.989 1.00 36.82 N \ ATOM 1448 CA ASP B 54 25.264 25.923 17.342 1.00 37.05 C \ ATOM 1449 C ASP B 54 26.312 26.540 18.263 1.00 36.99 C \ ATOM 1450 O ASP B 54 26.016 26.859 19.409 1.00 36.77 O \ ATOM 1451 CB ASP B 54 25.392 24.395 17.331 1.00 37.42 C \ ATOM 1452 CG ASP B 54 25.174 23.782 18.711 1.00 39.29 C \ ATOM 1453 OD1 ASP B 54 24.160 24.125 19.363 1.00 40.25 O \ ATOM 1454 OD2 ASP B 54 26.014 22.959 19.146 1.00 41.11 O \ ATOM 1455 N GLU B 55 27.532 26.720 17.758 1.00 37.14 N \ ATOM 1456 CA GLU B 55 28.585 27.389 18.528 1.00 37.69 C \ ATOM 1457 C GLU B 55 28.221 28.856 18.854 1.00 36.90 C \ ATOM 1458 O GLU B 55 28.541 29.346 19.936 1.00 36.56 O \ ATOM 1459 CB GLU B 55 29.933 27.305 17.801 1.00 37.81 C \ ATOM 1460 CG GLU B 55 30.574 25.903 17.792 1.00 39.39 C \ ATOM 1461 CD GLU B 55 31.915 25.858 17.051 1.00 39.91 C \ ATOM 1462 OE1 GLU B 55 32.133 26.665 16.124 1.00 42.10 O \ ATOM 1463 OE2 GLU B 55 32.757 24.998 17.389 1.00 44.30 O \ ATOM 1464 N LEU B 56 27.551 29.537 17.916 1.00 36.06 N \ ATOM 1465 CA LEU B 56 27.033 30.896 18.143 1.00 35.17 C \ ATOM 1466 C LEU B 56 25.955 30.955 19.224 1.00 34.33 C \ ATOM 1467 O LEU B 56 26.042 31.791 20.122 1.00 34.78 O \ ATOM 1468 CB LEU B 56 26.528 31.533 16.831 1.00 35.43 C \ ATOM 1469 CG LEU B 56 25.880 32.934 16.843 1.00 35.94 C \ ATOM 1470 CD1 LEU B 56 26.680 33.959 17.666 1.00 38.27 C \ ATOM 1471 CD2 LEU B 56 25.694 33.451 15.424 1.00 35.62 C \ ATOM 1472 N PHE B 57 24.940 30.093 19.130 1.00 33.49 N \ ATOM 1473 CA PHE B 57 23.905 30.000 20.166 1.00 32.66 C \ ATOM 1474 C PHE B 57 24.517 29.694 21.526 1.00 33.15 C \ ATOM 1475 O PHE B 57 24.164 30.336 22.522 1.00 32.57 O \ ATOM 1476 CB PHE B 57 22.893 28.899 19.841 1.00 32.20 C \ ATOM 1477 CG PHE B 57 21.835 29.304 18.857 1.00 30.56 C \ ATOM 1478 CD1 PHE B 57 20.765 30.098 19.254 1.00 28.67 C \ ATOM 1479 CD2 PHE B 57 21.891 28.861 17.539 1.00 29.72 C \ ATOM 1480 CE1 PHE B 57 19.780 30.462 18.346 1.00 28.08 C \ ATOM 1481 CE2 PHE B 57 20.906 29.215 16.626 1.00 28.16 C \ ATOM 1482 CZ PHE B 57 19.849 30.022 17.037 1.00 29.44 C \ ATOM 1483 N LYS B 58 25.401 28.689 21.561 1.00 33.74 N \ ATOM 1484 CA LYS B 58 26.173 28.346 22.756 1.00 34.90 C \ ATOM 1485 C LYS B 58 26.925 29.561 23.298 1.00 34.81 C \ ATOM 1486 O LYS B 58 26.783 29.908 24.474 1.00 34.74 O \ ATOM 1487 CB LYS B 58 27.174 27.212 22.468 1.00 35.17 C \ ATOM 1488 CG LYS B 58 26.592 25.801 22.504 1.00 36.69 C \ ATOM 1489 CD LYS B 58 27.654 24.728 22.166 1.00 36.54 C \ ATOM 1490 CE LYS B 58 27.054 23.312 22.279 1.00 38.45 C \ ATOM 1491 NZ LYS B 58 28.046 22.208 22.062 1.00 40.68 N \ ATOM 1492 N HIS B 59 27.738 30.191 22.446 1.00 35.24 N \ ATOM 1493 CA HIS B 59 28.512 31.362 22.852 1.00 35.50 C \ ATOM 1494 C HIS B 59 27.612 32.446 23.437 1.00 35.19 C \ ATOM 1495 O HIS B 59 27.865 32.930 24.533 1.00 35.17 O \ ATOM 1496 CB HIS B 59 29.316 31.938 21.682 1.00 35.73 C \ ATOM 1497 CG HIS B 59 29.678 33.381 21.866 1.00 37.20 C \ ATOM 1498 ND1 HIS B 59 30.749 33.786 22.634 1.00 38.10 N \ ATOM 1499 CD2 HIS B 59 29.084 34.515 21.419 1.00 37.65 C \ ATOM 1500 CE1 HIS B 59 30.810 35.107 22.639 1.00 37.64 C \ ATOM 1501 NE2 HIS B 59 29.811 35.573 21.910 1.00 38.29 N \ ATOM 1502 N TYR B 60 26.560 32.812 22.705 1.00 35.59 N \ ATOM 1503 CA TYR B 60 25.654 33.891 23.120 1.00 35.66 C \ ATOM 1504 C TYR B 60 25.027 33.634 24.496 1.00 36.25 C \ ATOM 1505 O TYR B 60 24.994 34.523 25.345 1.00 35.72 O \ ATOM 1506 CB TYR B 60 24.551 34.123 22.078 1.00 35.88 C \ ATOM 1507 CG TYR B 60 23.858 35.467 22.214 1.00 35.76 C \ ATOM 1508 CD1 TYR B 60 24.250 36.551 21.431 1.00 36.22 C \ ATOM 1509 CD2 TYR B 60 22.827 35.654 23.132 1.00 35.22 C \ ATOM 1510 CE1 TYR B 60 23.624 37.790 21.543 1.00 36.17 C \ ATOM 1511 CE2 TYR B 60 22.205 36.890 23.272 1.00 36.27 C \ ATOM 1512 CZ TYR B 60 22.606 37.953 22.463 1.00 36.46 C \ ATOM 1513 OH TYR B 60 22.000 39.171 22.582 1.00 35.92 O \ ATOM 1514 N GLU B 61 24.529 32.421 24.713 1.00 36.68 N \ ATOM 1515 CA GLU B 61 23.879 32.097 25.989 1.00 37.69 C \ ATOM 1516 C GLU B 61 24.841 32.075 27.191 1.00 37.99 C \ ATOM 1517 O GLU B 61 24.438 32.356 28.331 1.00 38.57 O \ ATOM 1518 CB GLU B 61 23.108 30.775 25.885 1.00 37.65 C \ ATOM 1519 CG GLU B 61 21.831 30.867 25.044 1.00 37.69 C \ ATOM 1520 CD GLU B 61 20.847 31.911 25.561 1.00 38.67 C \ ATOM 1521 OE1 GLU B 61 20.328 32.702 24.735 1.00 37.44 O \ ATOM 1522 OE2 GLU B 61 20.591 31.940 26.788 1.00 36.89 O \ ATOM 1523 N ALA B 62 26.101 31.749 26.931 1.00 38.15 N \ ATOM 1524 CA ALA B 62 27.118 31.704 27.976 1.00 38.87 C \ ATOM 1525 C ALA B 62 27.652 33.088 28.347 1.00 39.41 C \ ATOM 1526 O ALA B 62 28.130 33.297 29.457 1.00 39.28 O \ ATOM 1527 CB ALA B 62 28.255 30.802 27.552 1.00 38.73 C \ ATOM 1528 N VAL B 63 27.632 34.015 27.427 1.00 40.26 N \ ATOM 1529 CA VAL B 63 28.245 35.288 27.670 1.00 40.98 C \ ATOM 1530 C VAL B 63 27.311 36.462 27.644 1.00 41.52 C \ ATOM 1531 O VAL B 63 27.455 37.367 28.404 1.00 41.54 O \ ATOM 1532 CB VAL B 63 29.289 35.520 26.647 1.00 40.84 C \ ATOM 1533 CG1 VAL B 63 29.814 36.869 26.761 1.00 41.42 C \ ATOM 1534 CG2 VAL B 63 30.338 34.528 26.792 1.00 41.08 C \ ATOM 1535 N HIS B 64 26.248 36.411 26.868 1.00 41.85 N \ ATOM 1536 CA HIS B 64 25.351 37.557 26.793 1.00 42.58 C \ ATOM 1537 C HIS B 64 23.939 37.491 27.314 1.00 44.01 C \ ATOM 1538 O HIS B 64 23.235 38.463 27.237 1.00 44.32 O \ ATOM 1539 CB HIS B 64 25.246 38.061 25.374 1.00 41.92 C \ ATOM 1540 CG HIS B 64 26.551 38.245 24.711 1.00 39.27 C \ ATOM 1541 ND1 HIS B 64 27.533 39.030 25.245 1.00 38.03 N \ ATOM 1542 CD2 HIS B 64 27.049 37.726 23.581 1.00 36.16 C \ ATOM 1543 CE1 HIS B 64 28.581 38.995 24.464 1.00 36.75 C \ ATOM 1544 NE2 HIS B 64 28.304 38.219 23.448 1.00 35.39 N \ ATOM 1545 N ASP B 65 23.495 36.368 27.824 1.00 45.72 N \ ATOM 1546 CA ASP B 65 22.124 36.289 28.260 1.00 47.26 C \ ATOM 1547 C ASP B 65 21.988 36.400 29.771 1.00 48.46 C \ ATOM 1548 O ASP B 65 22.318 35.474 30.464 1.00 48.85 O \ ATOM 1549 CB ASP B 65 21.553 34.949 27.778 1.00 20.00 C \ ATOM 1550 CG ASP B 65 20.195 34.683 28.286 1.00 20.00 C \ ATOM 1551 OD1 ASP B 65 19.856 35.194 29.333 1.00 20.00 O \ ATOM 1552 OD2 ASP B 65 19.469 33.937 27.656 1.00 20.00 O \ ATOM 1553 N ALA B 66 21.549 37.537 30.293 1.00 49.99 N \ ATOM 1554 CA ALA B 66 20.974 37.626 31.635 1.00 51.23 C \ ATOM 1555 C ALA B 66 21.794 36.988 32.755 1.00 52.30 C \ ATOM 1556 O ALA B 66 21.234 36.412 33.675 1.00 52.00 O \ ATOM 1557 CB ALA B 66 19.592 37.070 31.641 1.00 20.00 C \ ATOM 1558 N GLY B 67 23.110 37.136 32.698 1.00 53.24 N \ ATOM 1559 CA GLY B 67 23.995 36.450 33.608 1.00 54.50 C \ ATOM 1560 C GLY B 67 24.318 35.005 33.300 1.00 55.30 C \ ATOM 1561 O GLY B 67 25.459 34.662 33.197 1.00 55.35 O \ ATOM 1562 N ASN B 68 23.301 34.168 33.179 1.00 56.06 N \ ATOM 1563 CA ASN B 68 23.434 32.865 32.581 1.00 56.86 C \ ATOM 1564 C ASN B 68 22.149 32.251 32.187 1.00 57.24 C \ ATOM 1565 O ASN B 68 21.132 32.910 32.015 1.00 57.28 O \ ATOM 1566 CB ASN B 68 24.225 31.859 33.391 1.00 20.00 C \ ATOM 1567 CG ASN B 68 25.117 31.004 32.533 1.00 20.00 C \ ATOM 1568 OD1 ASN B 68 25.860 31.508 31.731 1.00 20.00 O \ ATOM 1569 ND2 ASN B 68 25.059 29.714 32.715 1.00 20.00 N \ ATOM 1570 N ASP B 69 22.270 30.958 31.970 1.00 57.68 N \ ATOM 1571 CA ASP B 69 21.260 30.132 31.376 1.00 57.76 C \ ATOM 1572 C ASP B 69 21.732 29.963 29.973 1.00 57.83 C \ ATOM 1573 O ASP B 69 22.870 30.229 29.687 1.00 57.72 O \ ATOM 1574 CB ASP B 69 19.923 30.825 31.417 1.00 20.00 C \ ATOM 1575 CG ASP B 69 19.028 30.286 32.489 1.00 20.00 C \ ATOM 1576 OD1 ASP B 69 19.478 29.473 33.284 1.00 20.00 O \ ATOM 1577 OD2 ASP B 69 17.888 30.685 32.558 1.00 20.00 O \ TER 1578 ASP B 69 \ TER 2892 LYS C 183 \ TER 3142 ASP D 69 \ HETATM 3176 ZN ZN B 70 29.541 37.591 21.668 1.00 39.17 ZN \ HETATM 3352 O HOH B 71 26.434 37.798 2.110 1.00 35.08 O \ HETATM 3353 O HOH B 72 25.978 25.856 11.426 1.00 40.60 O \ HETATM 3354 O HOH B 73 32.528 31.877 23.710 1.00 39.87 O \ HETATM 3355 O HOH B 79 20.661 39.570 28.683 1.00 54.48 O \ HETATM 3356 O HOH B 99 28.898 44.924 19.320 1.00 40.60 O \ HETATM 3357 O HOH B 102 27.301 41.435 27.328 1.00 46.84 O \ HETATM 3358 O HOH B 111 35.500 39.896 14.938 1.00 44.79 O \ HETATM 3359 O HOH B 118 17.634 33.747 30.043 1.00 46.30 O \ HETATM 3360 O HOH B 136 15.233 35.138 31.109 1.00 41.36 O \ HETATM 3361 O HOH B 160 32.860 33.485 9.070 1.00 45.54 O \ HETATM 3362 O HOH B 166 26.305 28.264 26.578 1.00 50.72 O \ HETATM 3363 O HOH B 176 25.577 34.912 30.209 1.00 57.16 O \ HETATM 3364 O HOH B 193 31.231 32.123 10.788 1.00 44.87 O \ HETATM 3365 O HOH B 213 24.748 24.422 13.483 1.00 42.19 O \ HETATM 3366 O HOH B 219 39.817 41.447 11.143 1.00 50.52 O \ HETATM 3367 O HOH B 221 24.332 41.226 26.419 1.00 48.04 O \ HETATM 3368 O HOH B 224 25.790 26.866 32.426 1.00 46.68 O \ HETATM 3369 O HOH B 227 32.148 28.366 9.795 1.00 51.04 O \ HETATM 3370 O HOH B 236 33.053 39.318 3.807 1.00 42.58 O \ HETATM 3371 O HOH B 244 27.181 37.405 33.731 1.00 57.18 O \ HETATM 3372 O HOH B 263 30.081 28.412 7.666 1.00 51.48 O \ HETATM 3373 O HOH B 283 29.509 25.469 10.298 1.00 60.48 O \ HETATM 3374 O HOH B 298 36.707 35.919 16.424 1.00 48.59 O \ HETATM 3375 O HOH B 300 25.446 39.205 33.232 1.00 54.64 O \ HETATM 3376 O HOH B 307 27.917 22.389 14.775 1.00 45.60 O \ CONECT 141 3175 \ CONECT 292 3175 \ CONECT 1378 3176 \ CONECT 1400 3176 \ CONECT 1501 3176 \ CONECT 1544 3176 \ CONECT 1711 3209 \ CONECT 1862 3209 \ CONECT 2942 3210 \ CONECT 2964 3210 \ CONECT 3065 3210 \ CONECT 3108 3210 \ CONECT 3143 3144 3145 3146 3147 \ CONECT 3144 3143 \ CONECT 3145 3143 3175 \ CONECT 3146 3143 \ CONECT 3147 3143 3148 \ CONECT 3148 3147 3149 3150 3151 \ CONECT 3149 3148 \ CONECT 3150 3148 3175 \ CONECT 3151 3148 3152 \ CONECT 3152 3151 3153 3154 3155 \ CONECT 3153 3152 \ CONECT 3154 3152 \ CONECT 3155 3152 3156 \ CONECT 3156 3155 3157 \ CONECT 3157 3156 3158 3159 \ CONECT 3158 3157 3163 \ CONECT 3159 3157 3160 3161 \ CONECT 3160 3159 \ CONECT 3161 3159 3162 3163 \ CONECT 3162 3161 \ CONECT 3163 3158 3161 3164 \ CONECT 3164 3163 3165 3174 \ CONECT 3165 3164 3166 \ CONECT 3166 3165 3167 \ CONECT 3167 3166 3168 3174 \ CONECT 3168 3167 3169 3170 \ CONECT 3169 3168 \ CONECT 3170 3168 3171 \ CONECT 3171 3170 3172 3173 \ CONECT 3172 3171 \ CONECT 3173 3171 3174 \ CONECT 3174 3164 3167 3173 \ CONECT 3175 141 292 3145 3150 \ CONECT 3175 3334 3338 \ CONECT 3176 1378 1400 1501 1544 \ CONECT 3177 3178 3179 3180 3181 \ CONECT 3178 3177 \ CONECT 3179 3177 3209 \ CONECT 3180 3177 \ CONECT 3181 3177 3182 \ CONECT 3182 3181 3183 3184 3185 \ CONECT 3183 3182 \ CONECT 3184 3182 3209 \ CONECT 3185 3182 3186 \ CONECT 3186 3185 3187 3188 3189 \ CONECT 3187 3186 \ CONECT 3188 3186 \ CONECT 3189 3186 3190 \ CONECT 3190 3189 3191 \ CONECT 3191 3190 3192 3193 \ CONECT 3192 3191 3197 \ CONECT 3193 3191 3194 3195 \ CONECT 3194 3193 \ CONECT 3195 3193 3196 3197 \ CONECT 3196 3195 \ CONECT 3197 3192 3195 3198 \ CONECT 3198 3197 3199 3208 \ CONECT 3199 3198 3200 \ CONECT 3200 3199 3201 \ CONECT 3201 3200 3202 3208 \ CONECT 3202 3201 3203 3204 \ CONECT 3203 3202 \ CONECT 3204 3202 3205 \ CONECT 3205 3204 3206 3207 \ CONECT 3206 3205 \ CONECT 3207 3205 3208 \ CONECT 3208 3198 3201 3207 \ CONECT 3209 1711 1862 3179 3184 \ CONECT 3209 3468 3470 \ CONECT 3210 2942 2964 3065 3108 \ CONECT 3334 3175 \ CONECT 3338 3175 \ CONECT 3468 3209 \ CONECT 3470 3209 \ MASTER 354 0 6 16 16 0 20 6 3518 4 86 32 \ END \ """, "3mjhchainB") cmd.hide("all") cmd.color('grey70', "3mjhchainB") cmd.show('cartoon', "3mjhchainB") cmd.center("3mjhchainB", state=0, origin=1) cmd.zoom("3mjhchainB", animate=-1) cmd.select("e3mjhB1", "c. B & i. 36-69") cmd.color("red", "e3mjhB1") cmd.disable("e3mjhB1")