cmd.read_pdbstr("""\ HEADER VIRAL PROTEIN/INHIBITOR 17-JUL-15 5CMZ \ TITLE ARTIFICIAL HIV FUSION INHIBITOR AP3 FUSED TO THE C-TERMINUS OF GP41 \ TITLE 2 NHR \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN; \ COMPND 3 CHAIN: A, C; \ COMPND 4 FRAGMENT: UNP RESIDUES 35-79; \ COMPND 5 SYNONYM: GO41; \ COMPND 6 ENGINEERED: YES; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: ARTIFICIAL HIV ENTRY INHIBITOR AP3; \ COMPND 9 CHAIN: B, D; \ COMPND 10 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; \ SOURCE 3 ORGANISM_COMMON: HIV1; \ SOURCE 4 ORGANISM_TAXID: 11676; \ SOURCE 5 GENE: ENV; \ SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 8 MOL_ID: 2; \ SOURCE 9 SYNTHETIC: YES; \ SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; \ SOURCE 11 ORGANISM_TAXID: 32630 \ KEYWDS ENFUVIRTIDE, HIV FUSION INHIBITOR, AP3, GP41, 6-HB, VIRAL PROTEIN- \ KEYWDS 2 INHIBITOR COMPLEX \ EXPDTA X-RAY DIFFRACTION \ AUTHOR Y.ZHU,S.YE,R.ZHANG \ REVDAT 2 30-OCT-24 5CMZ 1 REMARK \ REVDAT 1 16-SEP-15 5CMZ 0 \ JRNL AUTH X.ZHU,Y.ZHU,S.YE,Q.WANG,W.XU,S.SU,Z.SUN,F.YU,Q.LIU,C.WANG, \ JRNL AUTH 2 T.ZHANG,Z.ZHANG,X.ZHANG,J.XU,L.DU,K.LIU,L.LU,R.ZHANG,S.JIANG \ JRNL TITL IMPROVED PHARMACOLOGICAL AND STRUCTURAL PROPERTIES OF HIV \ JRNL TITL 2 FUSION INHIBITOR AP3 OVER ENFUVIRTIDE: HIGHLIGHTING \ JRNL TITL 3 ADVANTAGES OF ARTIFICIAL PEPTIDE STRATEGY. \ JRNL REF SCI REP V. 5 13028 2015 \ JRNL REFN ESSN 2045-2322 \ JRNL PMID 26286358 \ JRNL DOI 10.1038/SREP13028 \ REMARK 2 \ REMARK 2 RESOLUTION. 2.57 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : PHENIX 1.8.1_1168 \ REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN \ REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, \ REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, \ REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, \ REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, \ REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, \ REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT \ REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : ML \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.98 \ REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 \ REMARK 3 NUMBER OF REFLECTIONS : 7574 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 \ REMARK 3 R VALUE (WORKING SET) : 0.245 \ REMARK 3 FREE R VALUE : 0.264 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.490 \ REMARK 3 FREE R VALUE TEST SET COUNT : 340 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). \ REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE \ REMARK 3 1 10.0000 - 3.2430 0.99 3841 174 0.2382 0.2520 \ REMARK 3 2 3.2430 - 2.5743 0.89 3393 166 0.2606 0.2908 \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL \ REMARK 3 SOLVENT RADIUS : 1.11 \ REMARK 3 SHRINKAGE RADIUS : 0.90 \ REMARK 3 K_SOL : NULL \ REMARK 3 B_SOL : NULL \ REMARK 3 \ REMARK 3 ERROR ESTIMATES. \ REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 \ REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.980 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : NULL \ REMARK 3 B22 (A**2) : NULL \ REMARK 3 B33 (A**2) : NULL \ REMARK 3 B12 (A**2) : NULL \ REMARK 3 B13 (A**2) : NULL \ REMARK 3 B23 (A**2) : NULL \ REMARK 3 \ REMARK 3 TWINNING INFORMATION. \ REMARK 3 FRACTION: NULL \ REMARK 3 OPERATOR: NULL \ REMARK 3 \ REMARK 3 DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 RMSD COUNT \ REMARK 3 BOND : 0.004 1367 \ REMARK 3 ANGLE : 0.471 1820 \ REMARK 3 CHIRALITY : 0.034 203 \ REMARK 3 PLANARITY : 0.001 226 \ REMARK 3 DIHEDRAL : 16.319 547 \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 NCS DETAILS \ REMARK 3 NUMBER OF NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: NULL \ REMARK 4 \ REMARK 4 5CMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-15. \ REMARK 100 THE DEPOSITION ID IS D_1000211900. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 26-SEP-14 \ REMARK 200 TEMPERATURE (KELVIN) : 100 \ REMARK 200 PH : 6.5 \ REMARK 200 NUMBER OF CRYSTALS USED : NULL \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : SSRF \ REMARK 200 BEAMLINE : BL17U \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.03317 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : PIXEL \ REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 \ REMARK 200 DATA SCALING SOFTWARE : HKL-2000 \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61523 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 \ REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 \ REMARK 200 DATA REDUNDANCY : 7.700 \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 27.2000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL \ REMARK 200 SOFTWARE USED: PHASER \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 63.06 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M BIS-TRIS \ REMARK 280 PH 6.5, 25% W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, \ REMARK 280 TEMPERATURE 289K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -Y,X-Y,Z \ REMARK 290 3555 -X+Y,-X,Z \ REMARK 290 4555 -X,-Y,Z+1/2 \ REMARK 290 5555 Y,-X+Y,Z+1/2 \ REMARK 290 6555 X-Y,X,Z+1/2 \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 113.94850 \ REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 113.94850 \ REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 113.94850 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 12980 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 12740 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -22.20150 \ REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 38.45413 \ REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -44.40300 \ REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 \ REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 12690 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 14670 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -44.40300 \ REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 \ REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -22.20150 \ REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -38.45413 \ REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 \ REMARK 375 \ REMARK 375 SPECIAL POSITION \ REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS \ REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL \ REMARK 375 POSITIONS. \ REMARK 375 \ REMARK 375 ATOM RES CSSEQI \ REMARK 375 HOH A 305 LIES ON A SPECIAL POSITION. \ REMARK 375 HOH A 306 LIES ON A SPECIAL POSITION. \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 SER A 1 \ REMARK 465 GLY A 2 \ REMARK 465 GLU B 73 \ REMARK 465 SER B 74 \ REMARK 465 ILE B 75 \ REMARK 465 LYS B 76 \ REMARK 465 LYS B 77 \ REMARK 465 ILE D 75 \ REMARK 465 LYS D 76 \ REMARK 465 LYS D 77 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 CH3 ACE D 40 N MET D 41 1.65 \ REMARK 500 O HOH A 313 O HOH C 212 1.85 \ REMARK 500 O HOH C 202 O HOH C 214 2.11 \ REMARK 500 OD1 ASP C 44 O HOH C 201 2.12 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC \ REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 \ REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A \ REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 \ REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE \ REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. \ REMARK 500 \ REMARK 500 DISTANCE CUTOFF: \ REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS \ REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE \ REMARK 500 O HOH A 302 O HOH B 101 2565 2.17 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 ACE B 40 O - C - N ANGL. DEV. = -16.9 DEGREES \ REMARK 500 ACE D 40 O - C - N ANGL. DEV. = -26.2 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 GLN B 71 -68.95 -120.40 \ REMARK 500 GLN D 71 44.98 -73.03 \ REMARK 500 GLU D 73 35.90 -73.98 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: AC1 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC2 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC3 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLN C 45 and NH2 C \ REMARK 800 100 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC4 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE D 40 and MET D \ REMARK 800 41 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 5CMU RELATED DB: PDB \ REMARK 900 RELATED ID: 5CN0 RELATED DB: PDB \ DBREF 5CMZ A 1 45 UNP Q1HMR5 Q1HMR5_9HIV1 35 79 \ DBREF 5CMZ B 40 77 PDB 5CMZ 5CMZ 40 77 \ DBREF 5CMZ C 1 45 UNP Q1HMR5 Q1HMR5_9HIV1 35 79 \ DBREF 5CMZ D 40 77 PDB 5CMZ 5CMZ 40 77 \ SEQADV 5CMZ NH2 A 100 UNP Q1HMR5 AMIDATION \ SEQADV 5CMZ NH2 C 100 UNP Q1HMR5 AMIDATION \ SEQRES 1 A 46 SER GLY ILE VAL GLN GLN GLN ASN ASN LEU LEU ARG ALA \ SEQRES 2 A 46 ILE GLU ALA GLN GLN HIS LEU LEU GLN LEU THR VAL TRP \ SEQRES 3 A 46 GLY ILE LYS GLN LEU GLN ALA ARG ILE LEU ALA VAL GLU \ SEQRES 4 A 46 ARG TYR LEU LYS ASP GLN NH2 \ SEQRES 1 B 38 ACE MET THR TRP GLU GLU TRP ASP LYS LYS ILE GLU GLU \ SEQRES 2 B 38 LEU ILE LYS LYS SER GLU GLU LEU ILE LYS LYS ILE GLU \ SEQRES 3 B 38 GLU GLN ILE LYS LYS GLN GLU GLU SER ILE LYS LYS \ SEQRES 1 C 46 SER GLY ILE VAL GLN GLN GLN ASN ASN LEU LEU ARG ALA \ SEQRES 2 C 46 ILE GLU ALA GLN GLN HIS LEU LEU GLN LEU THR VAL TRP \ SEQRES 3 C 46 GLY ILE LYS GLN LEU GLN ALA ARG ILE LEU ALA VAL GLU \ SEQRES 4 C 46 ARG TYR LEU LYS ASP GLN NH2 \ SEQRES 1 D 38 ACE MET THR TRP GLU GLU TRP ASP LYS LYS ILE GLU GLU \ SEQRES 2 D 38 LEU ILE LYS LYS SER GLU GLU LEU ILE LYS LYS ILE GLU \ SEQRES 3 D 38 GLU GLN ILE LYS LYS GLN GLU GLU SER ILE LYS LYS \ HET NH2 A 100 1 \ HET ACE B 40 3 \ HET NH2 C 100 1 \ HET ACE D 40 3 \ HET SO4 A 201 5 \ HET EDO A 202 4 \ HET P4G A 203 11 \ HETNAM NH2 AMINO GROUP \ HETNAM ACE ACETYL GROUP \ HETNAM SO4 SULFATE ION \ HETNAM EDO 1,2-ETHANEDIOL \ HETNAM P4G 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE \ HETSYN EDO ETHYLENE GLYCOL \ FORMUL 1 NH2 2(H2 N) \ FORMUL 2 ACE 2(C2 H4 O) \ FORMUL 5 SO4 O4 S 2- \ FORMUL 6 EDO C2 H6 O2 \ FORMUL 7 P4G C8 H18 O3 \ FORMUL 8 HOH *37(H2 O) \ HELIX 1 AA1 ILE A 3 GLN A 45 1 43 \ HELIX 2 AA2 THR B 42 LYS B 70 1 29 \ HELIX 3 AA3 ILE C 3 GLN C 45 1 43 \ HELIX 4 AA4 THR D 42 GLN D 71 1 30 \ LINK C GLN A 45 N NH2 A 100 1555 1555 1.21 \ LINK C ACE B 40 N MET B 41 1555 1555 1.33 \ LINK C GLN C 45 N NH2 C 100 1555 1555 1.33 \ LINK C ACE D 40 N MET D 41 1555 1555 1.30 \ SITE 1 AC1 6 ARG A 40 LYS A 43 HOH A 301 HOH A 304 \ SITE 2 AC1 6 ARG C 40 LYS C 43 \ SITE 1 AC2 3 ALA A 37 ASP A 44 HOH A 310 \ SITE 1 AC3 4 TYR C 41 LEU C 42 LYS C 43 ASP C 44 \ SITE 1 AC4 5 TRP C 26 THR D 42 GLU D 45 TRP D 46 \ SITE 2 AC4 5 LYS D 49 \ CRYST1 44.403 44.403 227.897 90.00 90.00 120.00 P 63 12 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.022521 0.013003 0.000000 0.00000 \ SCALE2 0.000000 0.026005 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.004388 0.00000 \ TER 366 NH2 A 100 \ HETATM 367 C ACE B 40 -38.648 6.260 -14.756 1.00 86.68 C \ HETATM 368 O ACE B 40 -38.784 5.047 -14.779 1.00 89.70 O \ HETATM 369 CH3 ACE B 40 -39.192 7.113 -15.877 1.00 80.07 C \ ATOM 370 N MET B 41 -37.516 6.511 -15.408 1.00 85.98 N \ ATOM 371 CA MET B 41 -36.560 5.622 -16.057 1.00 77.12 C \ ATOM 372 C MET B 41 -35.555 5.066 -15.049 1.00 66.19 C \ ATOM 373 O MET B 41 -35.091 5.781 -14.161 1.00 66.07 O \ ATOM 374 CB MET B 41 -35.837 6.354 -17.189 1.00 72.24 C \ ATOM 375 CG MET B 41 -35.008 5.451 -18.088 1.00 70.07 C \ ATOM 376 SD MET B 41 -34.195 6.362 -19.415 1.00 69.52 S \ ATOM 377 CE MET B 41 -33.410 5.019 -20.299 1.00 65.83 C \ ATOM 378 N THR B 42 -35.230 3.785 -15.195 1.00 68.93 N \ ATOM 379 CA THR B 42 -34.321 3.092 -14.283 1.00 71.72 C \ ATOM 380 C THR B 42 -32.906 3.017 -14.867 1.00 71.73 C \ ATOM 381 O THR B 42 -32.738 2.876 -16.077 1.00 70.67 O \ ATOM 382 CB THR B 42 -34.865 1.679 -13.945 1.00 77.54 C \ ATOM 383 OG1 THR B 42 -35.902 1.792 -12.962 1.00 74.43 O \ ATOM 384 CG2 THR B 42 -33.773 0.766 -13.407 1.00 77.81 C \ ATOM 385 N TRP B 43 -31.895 3.132 -14.007 1.00 66.59 N \ ATOM 386 CA TRP B 43 -30.499 3.106 -14.441 1.00 62.73 C \ ATOM 387 C TRP B 43 -30.101 1.828 -15.179 1.00 67.34 C \ ATOM 388 O TRP B 43 -29.185 1.844 -16.001 1.00 75.56 O \ ATOM 389 CB TRP B 43 -29.559 3.355 -13.257 1.00 54.53 C \ ATOM 390 CG TRP B 43 -29.318 4.811 -12.998 1.00 55.40 C \ ATOM 391 CD1 TRP B 43 -29.905 5.584 -12.040 1.00 48.08 C \ ATOM 392 CD2 TRP B 43 -28.430 5.674 -13.722 1.00 55.05 C \ ATOM 393 NE1 TRP B 43 -29.436 6.873 -12.121 1.00 52.84 N \ ATOM 394 CE2 TRP B 43 -28.531 6.954 -13.144 1.00 48.54 C \ ATOM 395 CE3 TRP B 43 -27.563 5.486 -14.800 1.00 48.82 C \ ATOM 396 CZ2 TRP B 43 -27.790 8.043 -13.612 1.00 43.58 C \ ATOM 397 CZ3 TRP B 43 -26.830 6.566 -15.262 1.00 45.18 C \ ATOM 398 CH2 TRP B 43 -26.949 7.828 -14.669 1.00 48.84 C \ ATOM 399 N GLU B 44 -30.781 0.723 -14.889 1.00 70.44 N \ ATOM 400 CA GLU B 44 -30.535 -0.517 -15.621 1.00 74.39 C \ ATOM 401 C GLU B 44 -31.200 -0.492 -16.994 1.00 68.49 C \ ATOM 402 O GLU B 44 -30.720 -1.123 -17.935 1.00 67.72 O \ ATOM 403 CB GLU B 44 -30.983 -1.742 -14.819 1.00 65.94 C \ ATOM 404 CG GLU B 44 -29.863 -2.392 -14.016 1.00 87.13 C \ ATOM 405 CD GLU B 44 -28.737 -2.918 -14.893 1.00 94.41 C \ ATOM 406 OE1 GLU B 44 -28.998 -3.269 -16.063 1.00101.30 O \ ATOM 407 OE2 GLU B 44 -27.587 -2.980 -14.410 1.00 91.54 O \ ATOM 408 N GLU B 45 -32.305 0.240 -17.102 1.00 65.01 N \ ATOM 409 CA GLU B 45 -32.925 0.486 -18.397 1.00 70.89 C \ ATOM 410 C GLU B 45 -32.007 1.397 -19.199 1.00 69.98 C \ ATOM 411 O GLU B 45 -31.861 1.243 -20.411 1.00 68.63 O \ ATOM 412 CB GLU B 45 -34.294 1.149 -18.231 1.00 77.37 C \ ATOM 413 CG GLU B 45 -35.287 0.366 -17.385 1.00 79.50 C \ ATOM 414 CD GLU B 45 -36.587 1.122 -17.172 1.00 82.48 C \ ATOM 415 OE1 GLU B 45 -36.675 2.291 -17.605 1.00 81.55 O \ ATOM 416 OE2 GLU B 45 -37.520 0.549 -16.573 1.00 87.31 O \ ATOM 417 N TRP B 46 -31.394 2.350 -18.504 1.00 71.46 N \ ATOM 418 CA TRP B 46 -30.449 3.277 -19.109 1.00 60.59 C \ ATOM 419 C TRP B 46 -29.256 2.517 -19.673 1.00 59.85 C \ ATOM 420 O TRP B 46 -28.813 2.787 -20.788 1.00 60.49 O \ ATOM 421 CB TRP B 46 -29.989 4.307 -18.073 1.00 56.89 C \ ATOM 422 CG TRP B 46 -29.084 5.373 -18.619 1.00 52.55 C \ ATOM 423 CD1 TRP B 46 -29.458 6.537 -19.227 1.00 50.70 C \ ATOM 424 CD2 TRP B 46 -27.651 5.376 -18.592 1.00 45.25 C \ ATOM 425 NE1 TRP B 46 -28.346 7.259 -19.585 1.00 48.79 N \ ATOM 426 CE2 TRP B 46 -27.224 6.569 -19.207 1.00 49.22 C \ ATOM 427 CE3 TRP B 46 -26.688 4.485 -18.112 1.00 48.82 C \ ATOM 428 CZ2 TRP B 46 -25.873 6.891 -19.353 1.00 45.90 C \ ATOM 429 CZ3 TRP B 46 -25.351 4.805 -18.257 1.00 45.76 C \ ATOM 430 CH2 TRP B 46 -24.955 5.997 -18.872 1.00 43.66 C \ ATOM 431 N ASP B 47 -28.750 1.560 -18.901 1.00 55.42 N \ ATOM 432 CA ASP B 47 -27.634 0.727 -19.337 1.00 60.55 C \ ATOM 433 C ASP B 47 -27.988 -0.083 -20.580 1.00 65.08 C \ ATOM 434 O ASP B 47 -27.140 -0.315 -21.441 1.00 60.93 O \ ATOM 435 CB ASP B 47 -27.191 -0.213 -18.211 1.00 72.53 C \ ATOM 436 CG ASP B 47 -26.456 0.509 -17.099 1.00 76.03 C \ ATOM 437 OD1 ASP B 47 -25.755 1.499 -17.392 1.00 77.07 O \ ATOM 438 OD2 ASP B 47 -26.574 0.080 -15.932 1.00 75.28 O \ ATOM 439 N LYS B 48 -29.244 -0.506 -20.670 1.00 67.16 N \ ATOM 440 CA LYS B 48 -29.695 -1.329 -21.786 1.00 64.02 C \ ATOM 441 C LYS B 48 -29.821 -0.510 -23.067 1.00 66.95 C \ ATOM 442 O LYS B 48 -29.400 -0.950 -24.136 1.00 69.83 O \ ATOM 443 CB LYS B 48 -31.029 -2.001 -21.453 1.00 68.15 C \ ATOM 444 CG LYS B 48 -31.463 -3.052 -22.463 1.00 76.99 C \ ATOM 445 CD LYS B 48 -32.796 -3.674 -22.074 1.00 80.68 C \ ATOM 446 CE LYS B 48 -33.221 -4.742 -23.069 1.00 79.75 C \ ATOM 447 NZ LYS B 48 -34.554 -5.316 -22.735 1.00 80.00 N \ ATOM 448 N LYS B 49 -30.394 0.685 -22.955 1.00 62.33 N \ ATOM 449 CA LYS B 49 -30.591 1.549 -24.117 1.00 64.14 C \ ATOM 450 C LYS B 49 -29.271 2.089 -24.660 1.00 65.93 C \ ATOM 451 O LYS B 49 -29.090 2.195 -25.873 1.00 64.90 O \ ATOM 452 CB LYS B 49 -31.538 2.704 -23.783 1.00 68.78 C \ ATOM 453 CG LYS B 49 -32.961 2.273 -23.460 1.00 74.86 C \ ATOM 454 CD LYS B 49 -33.917 3.457 -23.515 1.00 77.79 C \ ATOM 455 CE LYS B 49 -35.335 3.047 -23.148 1.00 80.57 C \ ATOM 456 NZ LYS B 49 -36.293 4.180 -23.288 1.00 86.57 N \ ATOM 457 N ILE B 50 -28.359 2.435 -23.755 1.00 61.73 N \ ATOM 458 CA ILE B 50 -27.033 2.912 -24.137 1.00 58.03 C \ ATOM 459 C ILE B 50 -26.282 1.855 -24.944 1.00 62.71 C \ ATOM 460 O ILE B 50 -25.743 2.143 -26.013 1.00 71.23 O \ ATOM 461 CB ILE B 50 -26.193 3.308 -22.900 1.00 58.88 C \ ATOM 462 CG1 ILE B 50 -26.726 4.597 -22.270 1.00 51.93 C \ ATOM 463 CG2 ILE B 50 -24.731 3.482 -23.277 1.00 49.18 C \ ATOM 464 CD1 ILE B 50 -26.511 5.832 -23.119 1.00 50.77 C \ ATOM 465 N GLU B 51 -26.267 0.627 -24.434 1.00 66.07 N \ ATOM 466 CA GLU B 51 -25.525 -0.462 -25.063 1.00 65.02 C \ ATOM 467 C GLU B 51 -26.061 -0.820 -26.448 1.00 66.88 C \ ATOM 468 O GLU B 51 -25.291 -1.144 -27.352 1.00 66.53 O \ ATOM 469 CB GLU B 51 -25.522 -1.700 -24.161 1.00 71.29 C \ ATOM 470 CG GLU B 51 -24.614 -2.820 -24.653 1.00 83.48 C \ ATOM 471 CD GLU B 51 -24.693 -4.065 -23.790 1.00100.82 C \ ATOM 472 OE1 GLU B 51 -25.248 -3.982 -22.674 1.00100.10 O \ ATOM 473 OE2 GLU B 51 -24.203 -5.127 -24.229 1.00113.47 O \ ATOM 474 N GLU B 52 -27.379 -0.761 -26.612 1.00 64.85 N \ ATOM 475 CA GLU B 52 -28.001 -1.059 -27.898 1.00 66.34 C \ ATOM 476 C GLU B 52 -27.669 0.012 -28.932 1.00 68.39 C \ ATOM 477 O GLU B 52 -27.388 -0.296 -30.090 1.00 70.02 O \ ATOM 478 CB GLU B 52 -29.518 -1.196 -27.748 1.00 69.53 C \ ATOM 479 CG GLU B 52 -29.960 -2.401 -26.930 1.00 83.18 C \ ATOM 480 CD GLU B 52 -31.459 -2.432 -26.697 1.00 94.83 C \ ATOM 481 OE1 GLU B 52 -31.912 -3.230 -25.849 1.00 94.60 O \ ATOM 482 OE2 GLU B 52 -32.185 -1.662 -27.361 1.00 95.47 O \ ATOM 483 N LEU B 53 -27.701 1.271 -28.506 1.00 68.03 N \ ATOM 484 CA LEU B 53 -27.418 2.393 -29.395 1.00 61.76 C \ ATOM 485 C LEU B 53 -25.951 2.443 -29.812 1.00 62.28 C \ ATOM 486 O LEU B 53 -25.631 2.859 -30.924 1.00 62.26 O \ ATOM 487 CB LEU B 53 -27.829 3.713 -28.741 1.00 57.86 C \ ATOM 488 CG LEU B 53 -29.325 4.020 -28.706 1.00 63.19 C \ ATOM 489 CD1 LEU B 53 -29.591 5.269 -27.885 1.00 59.31 C \ ATOM 490 CD2 LEU B 53 -29.861 4.185 -30.117 1.00 56.18 C \ ATOM 491 N ILE B 54 -25.063 2.018 -28.918 1.00 61.96 N \ ATOM 492 CA ILE B 54 -23.636 1.977 -29.223 1.00 65.11 C \ ATOM 493 C ILE B 54 -23.328 0.883 -30.244 1.00 68.58 C \ ATOM 494 O ILE B 54 -22.577 1.104 -31.195 1.00 64.75 O \ ATOM 495 CB ILE B 54 -22.787 1.771 -27.949 1.00 66.28 C \ ATOM 496 CG1 ILE B 54 -22.866 3.008 -27.051 1.00 67.25 C \ ATOM 497 CG2 ILE B 54 -21.337 1.485 -28.306 1.00 62.42 C \ ATOM 498 CD1 ILE B 54 -22.038 2.901 -25.786 1.00 59.81 C \ ATOM 499 N LYS B 55 -23.920 -0.293 -30.044 1.00 72.65 N \ ATOM 500 CA LYS B 55 -23.737 -1.419 -30.954 1.00 70.49 C \ ATOM 501 C LYS B 55 -24.256 -1.074 -32.346 1.00 70.46 C \ ATOM 502 O LYS B 55 -23.591 -1.333 -33.348 1.00 72.42 O \ ATOM 503 CB LYS B 55 -24.465 -2.655 -30.419 1.00 66.70 C \ ATOM 504 CG LYS B 55 -24.121 -3.950 -31.139 1.00 83.08 C \ ATOM 505 CD LYS B 55 -25.069 -5.071 -30.733 1.00 93.21 C \ ATOM 506 CE LYS B 55 -24.620 -6.417 -31.286 1.00 86.77 C \ ATOM 507 NZ LYS B 55 -23.379 -6.909 -30.627 1.00 88.78 N \ ATOM 508 N LYS B 56 -25.447 -0.484 -32.392 1.00 65.69 N \ ATOM 509 CA LYS B 56 -26.061 -0.045 -33.641 1.00 61.95 C \ ATOM 510 C LYS B 56 -25.197 0.995 -34.348 1.00 72.00 C \ ATOM 511 O LYS B 56 -25.032 0.953 -35.568 1.00 78.36 O \ ATOM 512 CB LYS B 56 -27.455 0.524 -33.364 1.00 67.54 C \ ATOM 513 CG LYS B 56 -28.070 1.303 -34.517 1.00 76.25 C \ ATOM 514 CD LYS B 56 -29.373 1.968 -34.089 1.00 86.24 C \ ATOM 515 CE LYS B 56 -29.925 2.877 -35.177 1.00 94.31 C \ ATOM 516 NZ LYS B 56 -31.155 3.597 -34.738 1.00103.68 N \ ATOM 517 N SER B 57 -24.641 1.921 -33.573 1.00 68.82 N \ ATOM 518 CA SER B 57 -23.782 2.964 -34.118 1.00 64.45 C \ ATOM 519 C SER B 57 -22.497 2.375 -34.696 1.00 67.24 C \ ATOM 520 O SER B 57 -21.996 2.845 -35.717 1.00 71.94 O \ ATOM 521 CB SER B 57 -23.453 4.002 -33.042 1.00 69.07 C \ ATOM 522 OG SER B 57 -22.697 5.072 -33.578 1.00 73.19 O \ ATOM 523 N GLU B 58 -21.975 1.341 -34.043 1.00 67.81 N \ ATOM 524 CA GLU B 58 -20.754 0.681 -34.496 1.00 69.67 C \ ATOM 525 C GLU B 58 -20.971 -0.094 -35.793 1.00 71.66 C \ ATOM 526 O GLU B 58 -20.105 -0.111 -36.666 1.00 68.47 O \ ATOM 527 CB GLU B 58 -20.210 -0.253 -33.411 1.00 67.43 C \ ATOM 528 CG GLU B 58 -19.585 0.460 -32.221 1.00 75.59 C \ ATOM 529 CD GLU B 58 -19.177 -0.497 -31.115 1.00 90.99 C \ ATOM 530 OE1 GLU B 58 -19.702 -1.630 -31.082 1.00 89.53 O \ ATOM 531 OE2 GLU B 58 -18.331 -0.114 -30.278 1.00 88.91 O \ ATOM 532 N GLU B 59 -22.129 -0.738 -35.911 1.00 73.45 N \ ATOM 533 CA GLU B 59 -22.452 -1.519 -37.101 1.00 74.89 C \ ATOM 534 C GLU B 59 -22.718 -0.618 -38.305 1.00 82.34 C \ ATOM 535 O GLU B 59 -22.497 -1.015 -39.448 1.00 88.25 O \ ATOM 536 CB GLU B 59 -23.651 -2.435 -36.838 1.00 78.25 C \ ATOM 537 CG GLU B 59 -23.381 -3.529 -35.811 1.00 87.95 C \ ATOM 538 CD GLU B 59 -24.606 -4.374 -35.515 1.00 95.08 C \ ATOM 539 OE1 GLU B 59 -24.464 -5.396 -34.812 1.00 96.81 O \ ATOM 540 OE2 GLU B 59 -25.709 -4.016 -35.979 1.00 93.51 O \ ATOM 541 N LEU B 60 -23.193 0.596 -38.041 1.00 75.80 N \ ATOM 542 CA LEU B 60 -23.430 1.573 -39.098 1.00 72.42 C \ ATOM 543 C LEU B 60 -22.117 2.166 -39.605 1.00 76.22 C \ ATOM 544 O LEU B 60 -21.979 2.467 -40.789 1.00 76.08 O \ ATOM 545 CB LEU B 60 -24.368 2.681 -38.612 1.00 65.09 C \ ATOM 546 CG LEU B 60 -25.853 2.324 -38.526 1.00 67.85 C \ ATOM 547 CD1 LEU B 60 -26.638 3.438 -37.858 1.00 63.04 C \ ATOM 548 CD2 LEU B 60 -26.407 2.038 -39.911 1.00 69.78 C \ ATOM 549 N ILE B 61 -21.154 2.328 -38.702 1.00 75.09 N \ ATOM 550 CA ILE B 61 -19.834 2.832 -39.068 1.00 77.04 C \ ATOM 551 C ILE B 61 -19.093 1.816 -39.940 1.00 78.52 C \ ATOM 552 O ILE B 61 -18.362 2.186 -40.859 1.00 81.01 O \ ATOM 553 CB ILE B 61 -19.002 3.200 -37.814 1.00 70.79 C \ ATOM 554 CG1 ILE B 61 -19.609 4.419 -37.116 1.00 70.32 C \ ATOM 555 CG2 ILE B 61 -17.558 3.488 -38.178 1.00 61.17 C \ ATOM 556 CD1 ILE B 61 -18.820 4.899 -35.916 1.00 70.05 C \ ATOM 557 N LYS B 62 -19.305 0.534 -39.660 1.00 81.95 N \ ATOM 558 CA LYS B 62 -18.713 -0.536 -40.456 1.00 82.48 C \ ATOM 559 C LYS B 62 -19.320 -0.580 -41.854 1.00 87.91 C \ ATOM 560 O LYS B 62 -18.619 -0.817 -42.838 1.00 86.10 O \ ATOM 561 CB LYS B 62 -18.900 -1.885 -39.759 1.00 77.43 C \ ATOM 562 CG LYS B 62 -17.597 -2.567 -39.377 1.00 86.94 C \ ATOM 563 CD LYS B 62 -16.706 -1.632 -38.575 1.00 89.55 C \ ATOM 564 CE LYS B 62 -15.365 -2.273 -38.260 1.00 96.43 C \ ATOM 565 NZ LYS B 62 -14.466 -1.336 -37.532 1.00 99.65 N \ ATOM 566 N LYS B 63 -20.628 -0.351 -41.928 1.00 85.38 N \ ATOM 567 CA LYS B 63 -21.357 -0.340 -43.192 1.00 78.22 C \ ATOM 568 C LYS B 63 -20.791 0.728 -44.122 1.00 88.33 C \ ATOM 569 O LYS B 63 -20.425 0.447 -45.263 1.00 88.68 O \ ATOM 570 CB LYS B 63 -22.839 -0.061 -42.931 1.00 80.22 C \ ATOM 571 CG LYS B 63 -23.806 -0.947 -43.700 1.00 82.20 C \ ATOM 572 CD LYS B 63 -25.247 -0.530 -43.431 1.00 82.31 C \ ATOM 573 CE LYS B 63 -26.241 -1.542 -43.980 1.00 84.09 C \ ATOM 574 NZ LYS B 63 -26.143 -2.852 -43.279 1.00 81.02 N \ ATOM 575 N ILE B 64 -20.721 1.954 -43.613 1.00 86.68 N \ ATOM 576 CA ILE B 64 -20.209 3.093 -44.366 1.00 84.69 C \ ATOM 577 C ILE B 64 -18.758 2.893 -44.792 1.00 89.60 C \ ATOM 578 O ILE B 64 -18.391 3.175 -45.933 1.00 89.89 O \ ATOM 579 CB ILE B 64 -20.310 4.385 -43.533 1.00 79.96 C \ ATOM 580 CG1 ILE B 64 -21.767 4.663 -43.156 1.00 77.02 C \ ATOM 581 CG2 ILE B 64 -19.715 5.562 -44.286 1.00 72.56 C \ ATOM 582 CD1 ILE B 64 -21.939 5.821 -42.200 1.00 74.33 C \ ATOM 583 N GLU B 65 -17.940 2.396 -43.870 1.00 90.39 N \ ATOM 584 CA GLU B 65 -16.509 2.246 -44.107 1.00 92.43 C \ ATOM 585 C GLU B 65 -16.209 1.205 -45.185 1.00 98.59 C \ ATOM 586 O GLU B 65 -15.139 1.224 -45.789 1.00 98.75 O \ ATOM 587 CB GLU B 65 -15.787 1.893 -42.802 1.00 90.87 C \ ATOM 588 CG GLU B 65 -14.336 2.349 -42.743 1.00 98.39 C \ ATOM 589 CD GLU B 65 -13.778 2.336 -41.331 1.00 99.82 C \ ATOM 590 OE1 GLU B 65 -14.334 1.616 -40.476 1.00 92.07 O \ ATOM 591 OE2 GLU B 65 -12.787 3.052 -41.075 1.00 97.93 O \ ATOM 592 N GLU B 66 -17.158 0.306 -45.428 1.00 93.59 N \ ATOM 593 CA GLU B 66 -16.988 -0.730 -46.442 1.00 96.35 C \ ATOM 594 C GLU B 66 -17.462 -0.272 -47.818 1.00102.04 C \ ATOM 595 O GLU B 66 -16.889 -0.652 -48.839 1.00106.34 O \ ATOM 596 CB GLU B 66 -17.716 -2.012 -46.033 1.00 92.70 C \ ATOM 597 CG GLU B 66 -17.006 -2.804 -44.951 1.00100.63 C \ ATOM 598 CD GLU B 66 -15.605 -3.216 -45.361 1.00104.24 C \ ATOM 599 OE1 GLU B 66 -15.474 -4.138 -46.192 1.00104.78 O \ ATOM 600 OE2 GLU B 66 -14.635 -2.615 -44.855 1.00104.92 O \ ATOM 601 N GLN B 67 -18.510 0.546 -47.838 1.00 96.68 N \ ATOM 602 CA GLN B 67 -19.052 1.068 -49.089 1.00 90.57 C \ ATOM 603 C GLN B 67 -18.119 2.104 -49.717 1.00 92.20 C \ ATOM 604 O GLN B 67 -18.268 2.459 -50.886 1.00 99.40 O \ ATOM 605 CB GLN B 67 -20.452 1.648 -48.867 1.00 91.56 C \ ATOM 606 CG GLN B 67 -21.523 0.587 -48.626 1.00 97.49 C \ ATOM 607 CD GLN B 67 -22.755 1.134 -47.925 1.00107.38 C \ ATOM 608 OE1 GLN B 67 -22.674 2.092 -47.157 1.00103.68 O \ ATOM 609 NE2 GLN B 67 -23.904 0.521 -48.185 1.00112.40 N \ ATOM 610 N ILE B 68 -17.157 2.582 -48.933 1.00 94.33 N \ ATOM 611 CA ILE B 68 -16.114 3.463 -49.445 1.00 96.02 C \ ATOM 612 C ILE B 68 -15.003 2.625 -50.071 1.00102.61 C \ ATOM 613 O ILE B 68 -14.483 2.956 -51.138 1.00106.00 O \ ATOM 614 CB ILE B 68 -15.521 4.352 -48.329 1.00 87.54 C \ ATOM 615 CG1 ILE B 68 -16.593 5.280 -47.755 1.00 87.45 C \ ATOM 616 CG2 ILE B 68 -14.348 5.166 -48.850 1.00 88.71 C \ ATOM 617 CD1 ILE B 68 -16.070 6.259 -46.723 1.00 88.58 C \ ATOM 618 N LYS B 69 -14.656 1.527 -49.405 1.00 99.95 N \ ATOM 619 CA LYS B 69 -13.600 0.634 -49.874 1.00101.25 C \ ATOM 620 C LYS B 69 -14.001 -0.117 -51.142 1.00107.64 C \ ATOM 621 O LYS B 69 -13.143 -0.608 -51.876 1.00108.61 O \ ATOM 622 CB LYS B 69 -13.210 -0.354 -48.772 1.00105.57 C \ ATOM 623 CG LYS B 69 -12.643 0.308 -47.527 1.00111.86 C \ ATOM 624 CD LYS B 69 -12.478 -0.690 -46.392 1.00113.30 C \ ATOM 625 CE LYS B 69 -12.085 0.005 -45.097 1.00116.54 C \ ATOM 626 NZ LYS B 69 -12.029 -0.940 -43.945 1.00113.43 N \ ATOM 627 N LYS B 70 -15.303 -0.204 -51.396 1.00102.84 N \ ATOM 628 CA LYS B 70 -15.805 -0.811 -52.625 1.00103.55 C \ ATOM 629 C LYS B 70 -15.523 0.086 -53.827 1.00107.76 C \ ATOM 630 O LYS B 70 -15.669 -0.332 -54.975 1.00108.70 O \ ATOM 631 CB LYS B 70 -17.307 -1.088 -52.525 1.00104.69 C \ ATOM 632 CG LYS B 70 -17.663 -2.424 -51.893 1.00109.37 C \ ATOM 633 CD LYS B 70 -19.158 -2.697 -51.996 1.00112.08 C \ ATOM 634 CE LYS B 70 -19.643 -2.608 -53.436 1.00110.90 C \ ATOM 635 NZ LYS B 70 -18.936 -3.564 -54.334 1.00113.18 N \ ATOM 636 N GLN B 71 -15.121 1.322 -53.550 1.00105.84 N \ ATOM 637 CA GLN B 71 -14.811 2.289 -54.593 1.00101.19 C \ ATOM 638 C GLN B 71 -13.364 2.752 -54.471 1.00105.59 C \ ATOM 639 O GLN B 71 -12.525 2.431 -55.314 1.00107.14 O \ ATOM 640 CB GLN B 71 -15.750 3.493 -54.488 1.00 98.31 C \ ATOM 641 CG GLN B 71 -17.225 3.129 -54.413 1.00 92.68 C \ ATOM 642 CD GLN B 71 -18.092 4.303 -54.004 1.00 90.85 C \ ATOM 643 OE1 GLN B 71 -17.587 5.370 -53.657 1.00 99.66 O \ ATOM 644 NE2 GLN B 71 -19.405 4.111 -54.040 1.00 94.52 N \ ATOM 645 N GLU B 72 -13.080 3.502 -53.411 1.00112.38 N \ ATOM 646 CA GLU B 72 -11.745 4.043 -53.172 1.00112.76 C \ ATOM 647 C GLU B 72 -10.784 2.959 -52.690 1.00110.85 C \ ATOM 648 O GLU B 72 -11.105 1.771 -52.720 1.00110.05 O \ ATOM 649 CB GLU B 72 -11.809 5.190 -52.155 1.00107.92 C \ ATOM 650 CG GLU B 72 -10.517 5.989 -52.007 1.00116.40 C \ ATOM 651 CD GLU B 72 -9.550 5.379 -51.008 1.00124.47 C \ ATOM 652 OE1 GLU B 72 -8.342 5.687 -51.084 1.00125.70 O \ ATOM 653 OE2 GLU B 72 -9.998 4.597 -50.143 1.00123.94 O \ TER 654 GLU B 72 \ TER 1034 NH2 C 100 \ TER 1337 SER D 74 \ HETATM 1377 O HOH B 101 -30.040 8.144 -10.275 1.00 54.43 O \ HETATM 1378 O HOH B 102 -35.307 6.534 -25.033 1.00 67.74 O \ CONECT 353 365 \ CONECT 365 353 \ CONECT 367 368 369 370 \ CONECT 368 367 \ CONECT 369 367 \ CONECT 370 367 \ CONECT 1026 1033 \ CONECT 1033 1026 \ CONECT 1035 1036 1037 1038 \ CONECT 1036 1035 \ CONECT 1037 1035 \ CONECT 1038 1035 \ CONECT 1338 1339 1340 1341 1342 \ CONECT 1339 1338 \ CONECT 1340 1338 \ CONECT 1341 1338 \ CONECT 1342 1338 \ CONECT 1343 1344 1345 \ CONECT 1344 1343 \ CONECT 1345 1343 1346 \ CONECT 1346 1345 \ CONECT 1347 1348 \ CONECT 1348 1347 1349 \ CONECT 1349 1348 1350 \ CONECT 1350 1349 1351 \ CONECT 1351 1350 1352 \ CONECT 1352 1351 1353 \ CONECT 1353 1352 1354 \ CONECT 1354 1353 1355 \ CONECT 1355 1354 1356 \ CONECT 1356 1355 1357 \ CONECT 1357 1356 \ MASTER 347 0 7 4 0 0 6 6 1374 4 32 14 \ END \ """, "5cmzchainB") cmd.hide("all") cmd.color('grey70', "5cmzchainB") cmd.show('cartoon', "5cmzchainB") cmd.center("5cmzchainB", state=0, origin=1) cmd.zoom("5cmzchainB", animate=-1) cmd.select("e5cmzB1", "c. B & i. 40-72") cmd.color("red", "e5cmzB1") cmd.disable("e5cmzB1")