cmd.read_pdbstr("""\ HEADER PROTEIN BINDING 09-FEB-18 6CDX \ TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF FLUOROPROPYLATED CYSTINE KNOT, \ TITLE 2 BINDING TO ALPHA-5 BETA-6 INTEGRIN \ CAVEAT 6CDX ILE B 3 HAS WRONG CHIRALITY AT ATOM CB \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: CYSTINE KNOT (FLUOROPROPYLATED); \ COMPND 3 CHAIN: A, B; \ COMPND 4 SYNONYM: TRYPSIN INHIBITOR 1, MCOTI-I, TRYPSIN INHIBITOR I; \ COMPND 5 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: MOMORDICA COCHINCHINENSIS; \ SOURCE 3 ORGANISM_COMMON: SPINY BITTER CUCUMBER; \ SOURCE 4 ORGANISM_TAXID: 3674; \ SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 \ KEYWDS CYSTEINE, DISULFIDES, ALPHA-5 BETA-6 INTEGRIN BINDING EPITOPE, CANCER \ KEYWDS 2 IMAGING, PROTEIN BINDING \ EXPDTA X-RAY DIFFRACTION \ AUTHOR R.KIMURA,J.NIX,C.BONGURA,S.CHAKRABORTI,S.GAMBHIR,F.V.FILIPP \ REVDAT 6 23-OCT-24 6CDX 1 REMARK \ REVDAT 5 04-OCT-23 6CDX 1 REMARK \ REVDAT 4 23-SEP-20 6CDX 1 REMARK \ REVDAT 3 26-FEB-20 6CDX 1 JRNL \ REVDAT 2 04-DEC-19 6CDX 1 REMARK \ REVDAT 1 14-AUG-19 6CDX 0 \ JRNL AUTH R.H.KIMURA,L.WANG,B.SHEN,L.HUO,W.TUMMERS,F.V.FILIPP,H.H.GUO, \ JRNL AUTH 2 T.HAYWOOD,L.ABOU-ELKACEM,L.BARATTO,F.HABTE,R.DEVULAPALLY, \ JRNL AUTH 3 T.H.WITNEY,Y.CHENG,S.TIKOLE,S.CHAKRABORTI,J.NIX, \ JRNL AUTH 4 C.A.BONAGURA,N.HATAMI,J.J.MOONEY,T.DESAI,S.TURNER, \ JRNL AUTH 5 R.S.GASTER,A.OTTE,B.C.VISSER,G.A.POULTSIDES,J.NORTON,W.PARK, \ JRNL AUTH 6 M.STOLOWITZ,K.LAU,E.YANG,A.NATARAJAN,O.ILOVICH,S.SRINIVAS, \ JRNL AUTH 7 A.SRINIVASAN,R.PAULMURUGAN,J.WILLMANN,F.T.CHIN,Z.CHENG, \ JRNL AUTH 8 A.IAGARU,F.LI,S.S.GAMBHIR \ JRNL TITL EVALUATION OF INTEGRIN ALPHA V BETA6CYSTINE KNOT PET TRACERS \ JRNL TITL 2 TO DETECT CANCER AND IDIOPATHIC PULMONARY FIBROSIS. \ JRNL REF NAT COMMUN V. 10 4673 2019 \ JRNL REFN ESSN 2041-1723 \ JRNL PMID 31611594 \ JRNL DOI 10.1038/S41467-019-11863-W \ REMARK 2 \ REMARK 2 RESOLUTION. 1.00 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.8.0123 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.82 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 \ REMARK 3 NUMBER OF REFLECTIONS : 25665 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 \ REMARK 3 R VALUE (WORKING SET) : 0.203 \ REMARK 3 FREE R VALUE : 0.226 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 1341 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : 20 \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.00 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.03 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 1388 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.88 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.3590 \ REMARK 3 BIN FREE R VALUE SET COUNT : 77 \ REMARK 3 BIN FREE R VALUE : 0.3640 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 529 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 52 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.15 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 0.00000 \ REMARK 3 B22 (A**2) : 0.01000 \ REMARK 3 B33 (A**2) : -0.01000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : 0.00000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.035 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.036 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.457 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 534 ; 0.032 ; 0.019 \ REMARK 3 BOND LENGTHS OTHERS (A): 494 ; 0.008 ; 0.020 \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 716 ; 3.366 ; 1.983 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): 1128 ; 1.703 ; 3.000 \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 70 ;11.462 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 24 ;18.835 ;20.000 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 86 ;11.798 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;24.686 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 74 ; 0.531 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 620 ; 0.016 ; 0.020 \ REMARK 3 GENERAL PLANES OTHERS (A): 134 ; 0.003 ; 0.020 \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING \ REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY \ REMARK 4 \ REMARK 4 6CDX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-18. \ REMARK 100 THE DEPOSITION ID IS D_1000232602. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 26-JUN-16 \ REMARK 200 TEMPERATURE (KELVIN) : 298 \ REMARK 200 PH : NULL \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : ALS \ REMARK 200 BEAMLINE : 4.2.2 \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 \ REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK SI(111) \ REMARK 200 SAGITTALLY FOCUSED \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CMOS \ REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS \ REMARK 200 DATA SCALING SOFTWARE : XDS \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27921 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 \ REMARK 200 RESOLUTION RANGE LOW (A) : 36.820 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 \ REMARK 200 DATA REDUNDANCY : 29.00 \ REMARK 200 R MERGE (I) : 0.03600 \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 32.3000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: PHASER \ REMARK 200 STARTING MODEL: PDB ENTRIES 2N8C & 2N8B \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 22.63 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.59 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: ISOPROPANOL, EVAPORATION, TEMPERATURE \ REMARK 280 298K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X+1/2,-Y,Z+1/2 \ REMARK 290 3555 -X,Y+1/2,-Z+1/2 \ REMARK 290 4555 X+1/2,-Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 8.47500 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.20500 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.12500 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.20500 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 8.47500 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.12500 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 4LT B 0 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 NH1 ARG B 18 O HOH B 103 0.06 \ REMARK 500 NH2 ARG B 18 O HOH B 102 0.13 \ REMARK 500 CZ ARG B 18 O HOH B 101 0.34 \ REMARK 500 O HOH B 120 O HOH B 128 0.92 \ REMARK 500 NE ARG B 18 O HOH B 101 1.01 \ REMARK 500 CZ ARG B 18 O HOH B 103 1.35 \ REMARK 500 CZ ARG B 18 O HOH B 102 1.46 \ REMARK 500 NH1 ARG B 18 O HOH B 101 1.49 \ REMARK 500 NH2 ARG B 18 O HOH B 101 1.51 \ REMARK 500 O HOH B 101 O HOH B 103 1.53 \ REMARK 500 O HOH B 101 O HOH B 102 1.61 \ REMARK 500 O HOH B 109 O HOH B 130 1.79 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC \ REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 \ REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A \ REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 \ REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE \ REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. \ REMARK 500 \ REMARK 500 DISTANCE CUTOFF: \ REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS \ REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE \ REMARK 500 O HOH A 107 O HOH B 112 2355 1.46 \ REMARK 500 O HOH B 108 O HOH B 115 1455 1.48 \ REMARK 500 O HOH B 115 O HOH B 128 1655 2.16 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 ASP A 22 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES \ REMARK 500 ARG A 30 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES \ REMARK 500 LEU B 14 CB - CG - CD2 ANGL. DEV. = 11.5 DEGREES \ REMARK 500 ARG B 18 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 PHE B 15 74.18 -101.84 \ REMARK 500 ALA B 26 16.96 51.54 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 2N8B RELATED DB: PDB \ REMARK 900 CYSTEINE KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 2N8C RELATED DB: PDB \ REMARK 900 CYSTEIN KNOT WITH 2FP INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 25844 RELATED DB: BMRB \ REMARK 900 CYSTEINE KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE \ REMARK 900 RELATED ID: 25845 RELATED DB: BMRB \ REMARK 900 CYSTEIN KNOT WITH 2FP INTEGRIN AVB6 CANCER RECOGNITION SITE \ DBREF 6CDX A 0 15 PDB 6CDX 6CDX 0 15 \ DBREF 6CDX A 16 36 UNP P82408 ITR1_MOMCO 14 34 \ DBREF 6CDX B 0 15 PDB 6CDX 6CDX 0 15 \ DBREF 6CDX B 16 36 UNP P82408 ITR1_MOMCO 14 34 \ SEQRES 1 A 37 4LT GLY CYS ILE LEU ASN GLY ARG THR ASP LEU GLY THR \ SEQRES 2 A 37 LEU LEU PHE ARG CYS ARG ARG ASP SER ASP CYS PRO GLY \ SEQRES 3 A 37 ALA CYS ILE CYS ARG GLY ASN GLY TYR CYS GLY \ SEQRES 1 B 37 4LT GLY CYS ILE LEU ASN GLY ARG THR ASP LEU GLY THR \ SEQRES 2 B 37 LEU LEU PHE ARG CYS ARG ARG ASP SER ASP CYS PRO GLY \ SEQRES 3 B 37 ALA CYS ILE CYS ARG GLY ASN GLY TYR CYS GLY \ HET 4LT A 0 5 \ HETNAM 4LT (2R)-2-FLUOROPROPANOIC ACID \ FORMUL 1 4LT C3 H5 F O2 \ FORMUL 3 HOH *52(H2 O) \ HELIX 1 AA1 LEU A 10 PHE A 15 5 6 \ HELIX 2 AA2 ARG A 19 CYS A 23 5 5 \ HELIX 3 AA3 ASP B 9 PHE B 15 5 7 \ HELIX 4 AA4 ARG B 19 CYS B 23 5 5 \ SHEET 1 AA1 2 ILE A 28 CYS A 29 0 \ SHEET 2 AA1 2 CYS A 35 GLY A 36 -1 O GLY A 36 N ILE A 28 \ SHEET 1 AA2 2 ILE B 28 CYS B 29 0 \ SHEET 2 AA2 2 CYS B 35 GLY B 36 -1 O GLY B 36 N ILE B 28 \ SSBOND 1 CYS A 2 CYS A 27 1555 1555 2.06 \ SSBOND 2 CYS A 17 CYS A 29 1555 1555 2.03 \ SSBOND 3 CYS A 23 CYS A 35 1555 1555 2.05 \ SSBOND 4 CYS B 2 CYS B 27 1555 1555 2.03 \ SSBOND 5 CYS B 17 CYS B 29 1555 1555 2.07 \ SSBOND 6 CYS B 23 CYS B 35 1555 1555 2.04 \ LINK C 4LT A 0 N GLY A 1 1555 1555 1.34 \ CRYST1 16.950 44.250 66.410 90.00 90.00 90.00 P 21 21 21 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.058997 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.022599 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.015058 0.00000 \ TER 272 GLY A 36 \ ATOM 273 N GLY B 1 -11.792 10.850 -13.581 1.00 16.02 N \ ATOM 274 CA GLY B 1 -11.211 9.521 -13.130 1.00 11.54 C \ ATOM 275 C GLY B 1 -11.874 8.997 -11.883 1.00 8.19 C \ ATOM 276 O GLY B 1 -12.815 9.649 -11.311 1.00 9.31 O \ ATOM 277 N CYS B 2 -11.381 7.856 -11.431 1.00 6.45 N \ ATOM 278 CA CYS B 2 -11.940 7.204 -10.245 1.00 5.65 C \ ATOM 279 C CYS B 2 -12.173 8.176 -9.105 1.00 6.12 C \ ATOM 280 O CYS B 2 -11.180 8.777 -8.616 1.00 6.35 O \ ATOM 281 CB CYS B 2 -11.040 6.084 -9.799 1.00 6.08 C \ ATOM 282 SG CYS B 2 -11.426 5.384 -8.190 1.00 5.82 S \ ATOM 283 N ILE B 3 -13.422 8.236 -8.625 1.00 5.56 N \ ATOM 284 CA ILE B 3 -13.783 9.286 -7.694 1.00 6.37 C \ ATOM 285 C ILE B 3 -13.160 9.059 -6.303 1.00 5.93 C \ ATOM 286 O ILE B 3 -13.120 9.981 -5.477 1.00 7.74 O \ ATOM 287 CB ILE B 3 -15.263 9.356 -7.567 1.00 7.48 C \ ATOM 288 CG1 ILE B 3 -15.933 8.169 -7.022 1.00 8.73 C \ ATOM 289 CG2 ILE B 3 -15.860 10.645 -7.112 1.00 9.63 C \ ATOM 290 CD1 ILE B 3 -15.399 7.292 -6.076 1.00 16.06 C \ ATOM 291 N LEU B 4 -12.641 7.868 -6.032 1.00 5.54 N \ ATOM 292 CA LEU B 4 -12.004 7.559 -4.772 1.00 5.70 C \ ATOM 293 C LEU B 4 -10.537 7.847 -4.728 1.00 6.23 C \ ATOM 294 O LEU B 4 -9.926 7.736 -3.652 1.00 7.07 O \ ATOM 295 CB LEU B 4 -12.207 6.080 -4.439 1.00 5.70 C \ ATOM 296 CG LEU B 4 -13.648 5.610 -4.406 1.00 6.36 C \ ATOM 297 CD1 LEU B 4 -13.766 4.115 -4.249 1.00 7.14 C \ ATOM 298 CD2 LEU B 4 -14.458 6.397 -3.359 1.00 7.89 C \ ATOM 299 N ASN B 5 -9.924 8.186 -5.845 1.00 6.01 N \ ATOM 300 CA ASN B 5 -8.499 8.328 -5.878 1.00 6.66 C \ ATOM 301 C ASN B 5 -7.999 9.348 -4.862 1.00 7.33 C \ ATOM 302 O ASN B 5 -8.545 10.385 -4.697 1.00 8.43 O \ ATOM 303 CB ASN B 5 -8.002 8.719 -7.284 1.00 7.65 C \ ATOM 304 CG ASN B 5 -7.949 7.550 -8.264 1.00 6.68 C \ ATOM 305 OD1 ASN B 5 -8.213 6.425 -7.903 1.00 8.30 O \ ATOM 306 ND2 ASN B 5 -7.550 7.761 -9.469 1.00 7.75 N \ ATOM 307 N GLY B 6 -6.944 8.969 -4.151 1.00 7.91 N \ ATOM 308 CA GLY B 6 -6.291 9.842 -3.193 1.00 8.57 C \ ATOM 309 C GLY B 6 -6.827 9.744 -1.792 1.00 7.72 C \ ATOM 310 O GLY B 6 -6.084 10.137 -0.856 1.00 8.48 O \ ATOM 311 N ARG B 7 -8.058 9.283 -1.597 1.00 7.13 N \ ATOM 312 CA ARG B 7 -8.648 9.383 -0.245 1.00 7.35 C \ ATOM 313 C ARG B 7 -7.943 8.549 0.763 1.00 7.01 C \ ATOM 314 O ARG B 7 -7.475 7.466 0.487 1.00 8.33 O \ ATOM 315 CB ARG B 7 -10.102 8.883 -0.288 1.00 7.17 C \ ATOM 316 CG ARG B 7 -11.000 9.868 -1.017 1.00 9.08 C \ ATOM 317 CD ARG B 7 -12.437 9.447 -1.119 1.00 10.03 C \ ATOM 318 NE ARG B 7 -13.036 9.241 0.187 1.00 9.46 N \ ATOM 319 CZ ARG B 7 -14.299 9.045 0.384 1.00 10.77 C \ ATOM 320 NH1 ARG B 7 -15.145 9.082 -0.664 1.00 12.25 N \ ATOM 321 NH2 ARG B 7 -14.740 8.843 1.557 1.00 11.05 N \ ATOM 322 N THR B 8 -7.833 9.110 1.954 1.00 7.21 N \ ATOM 323 CA THR B 8 -7.148 8.553 3.082 1.00 8.35 C \ ATOM 324 C THR B 8 -8.077 8.404 4.308 1.00 8.19 C \ ATOM 325 O THR B 8 -7.575 8.213 5.411 1.00 10.16 O \ ATOM 326 CB THR B 8 -5.907 9.376 3.447 1.00 8.80 C \ ATOM 327 OG1 THR B 8 -6.288 10.737 3.589 1.00 10.72 O \ ATOM 328 CG2 THR B 8 -4.894 9.191 2.381 1.00 10.26 C \ ATOM 329 N ASP B 9 -9.383 8.508 4.154 1.00 7.32 N \ ATOM 330 CA ASP B 9 -10.261 8.473 5.244 1.00 7.92 C \ ATOM 331 C ASP B 9 -11.006 7.169 5.368 1.00 6.51 C \ ATOM 332 O ASP B 9 -11.195 6.414 4.417 1.00 7.27 O \ ATOM 333 CB ASP B 9 -11.352 9.569 5.102 1.00 9.05 C \ ATOM 334 CG ASP B 9 -12.108 9.461 3.849 1.00 8.47 C \ ATOM 335 OD1 ASP B 9 -11.632 9.706 2.774 1.00 9.10 O \ ATOM 336 OD2 ASP B 9 -13.302 9.068 4.004 1.00 11.48 O \ ATOM 337 N LEU B 10 -11.519 6.924 6.604 1.00 7.27 N \ ATOM 338 CA LEU B 10 -12.233 5.666 6.920 1.00 6.96 C \ ATOM 339 C LEU B 10 -13.500 5.467 6.029 1.00 7.68 C \ ATOM 340 O LEU B 10 -13.894 4.327 5.777 1.00 7.69 O \ ATOM 341 CB LEU B 10 -12.591 5.601 8.392 1.00 8.37 C \ ATOM 342 CG LEU B 10 -13.203 4.314 8.924 1.00 10.91 C \ ATOM 343 CD1 LEU B 10 -12.203 3.200 8.747 1.00 16.30 C \ ATOM 344 CD2 LEU B 10 -13.642 4.584 10.347 1.00 10.90 C \ ATOM 345 N GLY B 11 -14.123 6.530 5.600 1.00 7.06 N \ ATOM 346 CA GLY B 11 -15.295 6.384 4.746 1.00 8.17 C \ ATOM 347 C GLY B 11 -15.030 5.680 3.439 1.00 7.68 C \ ATOM 348 O GLY B 11 -15.996 5.155 2.846 1.00 7.69 O \ ATOM 349 N THR B 12 -13.785 5.560 3.031 1.00 7.41 N \ ATOM 350 CA THR B 12 -13.482 4.724 1.848 1.00 7.94 C \ ATOM 351 C THR B 12 -13.815 3.274 2.072 1.00 7.46 C \ ATOM 352 O THR B 12 -14.042 2.526 1.094 1.00 8.09 O \ ATOM 353 CB THR B 12 -11.991 4.804 1.467 1.00 7.38 C \ ATOM 354 OG1 THR B 12 -11.110 4.322 2.444 1.00 8.92 O \ ATOM 355 CG2 THR B 12 -11.534 6.145 0.940 1.00 8.49 C \ ATOM 356 N LEU B 13 -13.857 2.840 3.338 1.00 7.65 N \ ATOM 357 CA LEU B 13 -14.203 1.463 3.575 1.00 8.34 C \ ATOM 358 C LEU B 13 -15.657 1.169 3.416 1.00 8.18 C \ ATOM 359 O LEU B 13 -16.010 -0.042 3.445 1.00 8.92 O \ ATOM 360 CB LEU B 13 -13.641 1.057 4.928 1.00 9.22 C \ ATOM 361 CG LEU B 13 -12.098 1.249 5.108 1.00 10.82 C \ ATOM 362 CD1 LEU B 13 -11.684 0.560 6.378 1.00 12.46 C \ ATOM 363 CD2 LEU B 13 -11.281 0.807 3.939 1.00 11.14 C \ ATOM 364 N LEU B 14 -16.488 2.146 3.128 1.00 6.59 N \ ATOM 365 CA LEU B 14 -17.805 1.853 2.665 1.00 6.94 C \ ATOM 366 C LEU B 14 -17.836 1.260 1.302 1.00 6.97 C \ ATOM 367 O LEU B 14 -18.865 0.679 0.846 1.00 9.75 O \ ATOM 368 CB LEU B 14 -18.680 3.100 2.622 1.00 7.57 C \ ATOM 369 CG LEU B 14 -19.066 3.759 3.973 1.00 9.29 C \ ATOM 370 CD1 LEU B 14 -19.862 2.833 4.840 1.00 9.89 C \ ATOM 371 CD2 LEU B 14 -18.093 4.567 4.783 1.00 16.23 C \ ATOM 372 N PHE B 15 -16.734 1.283 0.563 1.00 5.96 N \ ATOM 373 CA PHE B 15 -16.671 0.659 -0.758 1.00 6.41 C \ ATOM 374 C PHE B 15 -15.973 -0.658 -0.728 1.00 6.50 C \ ATOM 375 O PHE B 15 -14.800 -0.812 -1.190 1.00 7.73 O \ ATOM 376 CB PHE B 15 -16.020 1.668 -1.693 1.00 6.70 C \ ATOM 377 CG PHE B 15 -16.824 2.905 -1.870 1.00 8.11 C \ ATOM 378 CD1 PHE B 15 -16.693 3.961 -1.036 1.00 8.84 C \ ATOM 379 CD2 PHE B 15 -17.775 3.034 -2.902 1.00 9.91 C \ ATOM 380 CE1 PHE B 15 -17.424 5.123 -1.195 1.00 10.82 C \ ATOM 381 CE2 PHE B 15 -18.540 4.177 -3.046 1.00 12.06 C \ ATOM 382 CZ PHE B 15 -18.329 5.211 -2.206 1.00 12.30 C \ ATOM 383 N ARG B 16 -16.649 -1.655 -0.200 1.00 7.89 N \ ATOM 384 CA ARG B 16 -16.125 -3.046 -0.210 1.00 8.70 C \ ATOM 385 C ARG B 16 -16.325 -3.615 -1.622 1.00 6.73 C \ ATOM 386 O ARG B 16 -17.256 -3.223 -2.348 1.00 7.37 O \ ATOM 387 CB ARG B 16 -16.926 -3.938 0.771 1.00 11.08 C \ ATOM 388 CG ARG B 16 -16.793 -3.617 2.270 1.00 22.18 C \ ATOM 389 CD ARG B 16 -17.660 -4.465 3.245 1.00 26.96 C \ ATOM 390 NE ARG B 16 -17.462 -5.915 3.080 1.00 32.42 N \ ATOM 391 CZ ARG B 16 -16.478 -6.671 3.604 1.00 37.02 C \ ATOM 392 NH1 ARG B 16 -16.376 -7.944 3.331 1.00 41.13 N \ ATOM 393 NH2 ARG B 16 -15.603 -6.184 4.426 1.00 38.33 N \ ATOM 394 N CYS B 17 -15.503 -4.598 -1.971 1.00 6.53 N \ ATOM 395 CA CYS B 17 -15.623 -5.171 -3.291 1.00 5.17 C \ ATOM 396 C CYS B 17 -15.143 -6.588 -3.326 1.00 6.20 C \ ATOM 397 O CYS B 17 -14.217 -6.897 -2.607 1.00 6.87 O \ ATOM 398 CB CYS B 17 -14.883 -4.297 -4.366 1.00 4.98 C \ ATOM 399 SG CYS B 17 -13.141 -4.132 -4.011 1.00 5.68 S \ ATOM 400 N ARG B 18 -15.730 -7.357 -4.239 1.00 5.18 N \ ATOM 401 CA ARG B 18 -15.117 -8.597 -4.707 1.00 5.72 C \ ATOM 402 C ARG B 18 -14.601 -8.429 -6.142 1.00 4.94 C \ ATOM 403 O ARG B 18 -13.658 -9.164 -6.534 1.00 6.21 O \ ATOM 404 CB ARG B 18 -16.108 -9.755 -4.660 1.00 7.24 C \ ATOM 405 CG ARG B 18 -16.466 -10.149 -3.254 1.00 8.05 C \ ATOM 406 CD ARG B 18 -17.522 -11.301 -3.267 1.00 11.81 C \ ATOM 407 NE ARG B 18 -17.906 -11.671 -1.912 1.00 24.08 N \ ATOM 408 CZ ARG B 18 -17.284 -12.516 -1.136 1.00 35.53 C \ ATOM 409 NH1 ARG B 18 -16.226 -13.176 -1.536 1.00 41.53 N \ ATOM 410 NH2 ARG B 18 -17.822 -12.651 0.082 1.00 40.21 N \ ATOM 411 N ARG B 19 -15.242 -7.540 -6.941 1.00 4.83 N \ ATOM 412 CA ARG B 19 -14.819 -7.327 -8.315 1.00 5.02 C \ ATOM 413 C ARG B 19 -14.811 -5.835 -8.589 1.00 3.87 C \ ATOM 414 O ARG B 19 -15.417 -5.016 -7.864 1.00 3.79 O \ ATOM 415 CB ARG B 19 -15.806 -7.938 -9.316 1.00 7.75 C \ ATOM 416 CG ARG B 19 -16.038 -9.385 -9.251 1.00 15.40 C \ ATOM 417 CD ARG B 19 -16.987 -9.805 -10.341 1.00 14.17 C \ ATOM 418 NE ARG B 19 -18.341 -9.255 -10.099 1.00 26.31 N \ ATOM 419 CZ ARG B 19 -19.316 -9.290 -11.042 1.00 26.85 C \ ATOM 420 NH1 ARG B 19 -20.508 -8.798 -10.782 1.00 34.12 N \ ATOM 421 NH2 ARG B 19 -19.106 -9.846 -12.233 1.00 33.05 N \ ATOM 422 N ASP B 20 -14.119 -5.451 -9.652 1.00 3.96 N \ ATOM 423 CA ASP B 20 -14.056 -4.023 -10.032 1.00 4.22 C \ ATOM 424 C ASP B 20 -15.460 -3.453 -10.196 1.00 4.02 C \ ATOM 425 O ASP B 20 -15.681 -2.255 -9.904 1.00 4.40 O \ ATOM 426 CB ASP B 20 -13.275 -3.828 -11.280 1.00 4.22 C \ ATOM 427 CG ASP B 20 -11.821 -4.194 -11.202 1.00 4.06 C \ ATOM 428 OD1 ASP B 20 -11.275 -4.379 -10.120 1.00 4.49 O \ ATOM 429 OD2 ASP B 20 -11.220 -4.268 -12.339 1.00 5.34 O \ ATOM 430 N SER B 21 -16.420 -4.232 -10.673 1.00 4.23 N \ ATOM 431 CA SER B 21 -17.795 -3.748 -10.863 1.00 4.87 C \ ATOM 432 C SER B 21 -18.484 -3.381 -9.584 1.00 3.91 C \ ATOM 433 O SER B 21 -19.566 -2.768 -9.664 1.00 4.92 O \ ATOM 434 CB SER B 21 -18.600 -4.727 -11.661 1.00 6.06 C \ ATOM 435 OG SER B 21 -18.540 -5.989 -11.097 1.00 7.45 O \ ATOM 436 N ASP B 22 -17.959 -3.780 -8.416 1.00 3.72 N \ ATOM 437 CA ASP B 22 -18.532 -3.326 -7.161 1.00 3.87 C \ ATOM 438 C ASP B 22 -18.109 -1.866 -6.838 1.00 3.54 C \ ATOM 439 O ASP B 22 -18.588 -1.309 -5.867 1.00 4.84 O \ ATOM 440 CB ASP B 22 -18.054 -4.226 -6.040 1.00 4.47 C \ ATOM 441 CG ASP B 22 -18.601 -5.638 -6.210 1.00 5.31 C \ ATOM 442 OD1 ASP B 22 -19.832 -5.771 -6.538 1.00 6.20 O \ ATOM 443 OD2 ASP B 22 -17.853 -6.612 -6.005 1.00 5.97 O \ ATOM 444 N CYS B 23 -17.181 -1.304 -7.635 1.00 3.86 N \ ATOM 445 CA CYS B 23 -16.578 -0.032 -7.346 1.00 3.94 C \ ATOM 446 C CYS B 23 -17.101 1.036 -8.317 1.00 4.33 C \ ATOM 447 O CYS B 23 -17.641 0.714 -9.374 1.00 4.37 O \ ATOM 448 CB CYS B 23 -15.082 -0.124 -7.453 1.00 4.25 C \ ATOM 449 SG CYS B 23 -14.333 -1.335 -6.386 1.00 4.67 S \ ATOM 450 N PRO B 24 -16.929 2.323 -7.977 1.00 4.56 N \ ATOM 451 CA PRO B 24 -17.337 3.385 -8.891 1.00 4.86 C \ ATOM 452 C PRO B 24 -16.642 3.278 -10.221 1.00 5.15 C \ ATOM 453 O PRO B 24 -15.578 2.583 -10.382 1.00 4.92 O \ ATOM 454 CB PRO B 24 -17.067 4.666 -8.136 1.00 5.04 C \ ATOM 455 CG PRO B 24 -17.170 4.225 -6.702 1.00 5.79 C \ ATOM 456 CD PRO B 24 -16.492 2.853 -6.693 1.00 4.96 C \ ATOM 457 N GLY B 25 -17.198 3.978 -11.237 1.00 5.48 N \ ATOM 458 CA GLY B 25 -16.641 3.941 -12.575 1.00 14.01 C \ ATOM 459 C GLY B 25 -15.156 4.323 -12.524 1.00 13.50 C \ ATOM 460 O GLY B 25 -14.697 5.263 -11.988 1.00 7.73 O \ ATOM 461 N ALA B 26 -14.417 3.660 -13.227 1.00 4.82 N \ ATOM 462 CA ALA B 26 -12.996 3.513 -13.394 1.00 13.17 C \ ATOM 463 C ALA B 26 -12.201 3.253 -12.151 1.00 6.43 C \ ATOM 464 O ALA B 26 -10.945 3.333 -12.196 1.00 11.86 O \ ATOM 465 CB ALA B 26 -12.470 4.781 -14.022 1.00 9.31 C \ ATOM 466 N CYS B 27 -12.818 2.839 -11.053 1.00 4.60 N \ ATOM 467 CA CYS B 27 -12.056 2.457 -9.892 1.00 4.66 C \ ATOM 468 C CYS B 27 -11.773 0.957 -9.909 1.00 5.01 C \ ATOM 469 O CYS B 27 -12.425 0.178 -10.648 1.00 8.12 O \ ATOM 470 CB CYS B 27 -12.864 2.771 -8.655 1.00 4.61 C \ ATOM 471 SG CYS B 27 -13.257 4.541 -8.451 1.00 5.33 S \ ATOM 472 N ILE B 28 -10.806 0.557 -9.107 1.00 5.37 N \ ATOM 473 CA ILE B 28 -10.314 -0.837 -9.099 1.00 5.48 C \ ATOM 474 C ILE B 28 -10.649 -1.480 -7.746 1.00 4.94 C \ ATOM 475 O ILE B 28 -10.594 -0.826 -6.699 1.00 5.33 O \ ATOM 476 CB ILE B 28 -8.774 -0.789 -9.418 1.00 7.65 C \ ATOM 477 CG1 ILE B 28 -8.265 -2.164 -9.737 1.00 9.27 C \ ATOM 478 CG2 ILE B 28 -7.926 -0.069 -8.321 1.00 14.80 C \ ATOM 479 CD1 ILE B 28 -6.856 -2.164 -10.220 1.00 16.44 C \ ATOM 480 N CYS B 29 -10.998 -2.758 -7.770 1.00 5.02 N \ ATOM 481 CA CYS B 29 -11.097 -3.542 -6.558 1.00 4.52 C \ ATOM 482 C CYS B 29 -9.754 -4.001 -6.217 1.00 4.51 C \ ATOM 483 O CYS B 29 -9.113 -4.762 -6.923 1.00 4.96 O \ ATOM 484 CB CYS B 29 -12.065 -4.656 -6.774 1.00 4.82 C \ ATOM 485 SG CYS B 29 -12.326 -5.597 -5.216 1.00 5.84 S \ ATOM 486 N ARG B 30 -9.240 -3.516 -5.077 1.00 4.00 N \ ATOM 487 CA ARG B 30 -7.889 -3.809 -4.637 1.00 4.40 C \ ATOM 488 C ARG B 30 -7.828 -5.169 -3.989 1.00 5.42 C \ ATOM 489 O ARG B 30 -8.880 -5.732 -3.508 1.00 6.49 O \ ATOM 490 CB ARG B 30 -7.413 -2.781 -3.635 1.00 4.85 C \ ATOM 491 CG ARG B 30 -7.463 -1.346 -4.197 1.00 5.13 C \ ATOM 492 CD ARG B 30 -7.037 -0.345 -3.108 1.00 5.24 C \ ATOM 493 NE ARG B 30 -5.631 -0.424 -2.850 1.00 5.41 N \ ATOM 494 CZ ARG B 30 -5.076 -0.031 -1.705 1.00 7.95 C \ ATOM 495 NH1 ARG B 30 -3.743 -0.181 -1.545 1.00 10.10 N \ ATOM 496 NH2 ARG B 30 -5.807 0.456 -0.732 1.00 11.28 N \ ATOM 497 N GLY B 31 -6.615 -5.726 -3.809 1.00 6.64 N \ ATOM 498 CA GLY B 31 -6.466 -7.018 -3.129 1.00 8.26 C \ ATOM 499 C GLY B 31 -6.913 -6.968 -1.684 1.00 9.23 C \ ATOM 500 O GLY B 31 -7.085 -8.010 -1.021 1.00 10.84 O \ ATOM 501 N ASN B 32 -7.015 -5.795 -1.081 1.00 10.25 N \ ATOM 502 CA ASN B 32 -7.510 -5.696 0.352 1.00 12.45 C \ ATOM 503 C ASN B 32 -9.007 -5.819 0.479 1.00 12.16 C \ ATOM 504 O ASN B 32 -9.491 -5.721 1.622 1.00 14.45 O \ ATOM 505 CB ASN B 32 -7.005 -4.429 1.055 1.00 13.67 C \ ATOM 506 CG ASN B 32 -7.444 -3.127 0.410 1.00 11.96 C \ ATOM 507 OD1 ASN B 32 -8.324 -3.138 -0.435 1.00 8.90 O \ ATOM 508 ND2 ASN B 32 -6.845 -1.983 0.789 1.00 14.91 N \ ATOM 509 N GLY B 33 -9.756 -5.965 -0.606 1.00 10.50 N \ ATOM 510 CA GLY B 33 -11.191 -6.098 -0.562 1.00 10.32 C \ ATOM 511 C GLY B 33 -11.900 -4.799 -0.500 1.00 6.29 C \ ATOM 512 O GLY B 33 -13.099 -4.787 -0.280 1.00 6.83 O \ ATOM 513 N TYR B 34 -11.176 -3.711 -0.826 1.00 5.92 N \ ATOM 514 CA TYR B 34 -11.828 -2.404 -0.902 1.00 5.37 C \ ATOM 515 C TYR B 34 -11.470 -1.783 -2.225 1.00 4.98 C \ ATOM 516 O TYR B 34 -10.433 -2.049 -2.894 1.00 5.36 O \ ATOM 517 CB TYR B 34 -11.336 -1.459 0.202 1.00 6.07 C \ ATOM 518 CG TYR B 34 -11.662 -1.953 1.577 1.00 6.00 C \ ATOM 519 CD1 TYR B 34 -12.939 -1.849 2.067 1.00 6.26 C \ ATOM 520 CD2 TYR B 34 -10.730 -2.624 2.348 1.00 6.62 C \ ATOM 521 CE1 TYR B 34 -13.267 -2.306 3.308 1.00 6.93 C \ ATOM 522 CE2 TYR B 34 -11.061 -3.159 3.601 1.00 6.92 C \ ATOM 523 CZ TYR B 34 -12.339 -3.035 4.036 1.00 6.48 C \ ATOM 524 OH TYR B 34 -12.642 -3.525 5.317 1.00 8.28 O \ ATOM 525 N CYS B 35 -12.322 -0.865 -2.665 1.00 5.14 N \ ATOM 526 CA CYS B 35 -12.115 -0.135 -3.902 1.00 4.94 C \ ATOM 527 C CYS B 35 -11.008 0.890 -3.740 1.00 5.54 C \ ATOM 528 O CYS B 35 -10.773 1.382 -2.594 1.00 6.96 O \ ATOM 529 CB CYS B 35 -13.386 0.608 -4.315 1.00 4.92 C \ ATOM 530 SG CYS B 35 -14.779 -0.531 -4.562 1.00 4.66 S \ ATOM 531 N AGLY B 36 -10.393 1.261 -4.823 0.50 5.61 N \ ATOM 532 N BGLY B 36 -10.372 1.246 -4.859 0.50 5.61 N \ ATOM 533 CA AGLY B 36 -9.436 2.339 -4.837 0.50 6.20 C \ ATOM 534 CA BGLY B 36 -9.427 2.348 -4.852 0.50 6.20 C \ ATOM 535 C AGLY B 36 -9.371 3.043 -6.158 0.50 5.76 C \ ATOM 536 C BGLY B 36 -9.371 3.093 -6.164 0.50 5.76 C \ ATOM 537 O AGLY B 36 -9.864 2.515 -7.165 0.50 7.44 O \ ATOM 538 O BGLY B 36 -8.774 4.237 -6.191 0.50 7.44 O \ TER 539 GLY B 36 \ HETATM 562 O HOH B 101 -17.512 -12.436 -1.375 1.00 24.44 O \ HETATM 563 O HOH B 102 -17.893 -12.613 0.184 1.00 16.43 O \ HETATM 564 O HOH B 103 -16.173 -13.159 -1.546 1.00 16.95 O \ HETATM 565 O HOH B 104 -10.223 -7.222 3.391 1.00 18.44 O \ HETATM 566 O HOH B 105 -15.173 -3.904 5.817 1.00 16.69 O \ HETATM 567 O HOH B 106 -12.606 2.737 -1.279 1.00 15.99 O \ HETATM 568 O HOH B 107 -6.322 6.009 -1.389 1.00 16.22 O \ HETATM 569 O HOH B 108 -21.894 -4.212 -5.982 1.00 17.48 O \ HETATM 570 O HOH B 109 -20.501 -6.318 -9.066 1.00 12.91 O \ HETATM 571 O HOH B 110 -21.364 0.420 1.803 1.00 15.32 O \ HETATM 572 O HOH B 111 -15.343 10.600 -11.180 1.00 17.86 O \ HETATM 573 O HOH B 112 -10.866 -2.201 -14.071 1.00 17.47 O \ HETATM 574 O HOH B 113 -16.781 -1.873 5.310 1.00 15.20 O \ HETATM 575 O HOH B 114 -5.238 7.420 6.582 1.00 14.05 O \ HETATM 576 O HOH B 115 -4.393 -4.322 -4.614 1.00 10.36 O \ HETATM 577 O HOH B 116 -18.427 -0.833 -3.069 1.00 7.09 O \ HETATM 578 O HOH B 117 -14.921 -13.392 -3.957 1.00 15.53 O \ HETATM 579 O HOH B 118 -12.808 -0.287 -13.344 1.00 17.47 O \ HETATM 580 O HOH B 119 -4.465 -2.366 2.150 1.00 17.07 O \ HETATM 581 O HOH B 120 -21.262 -1.532 -5.134 1.00 9.50 O \ HETATM 582 O HOH B 121 -17.009 9.403 3.070 1.00 19.04 O \ HETATM 583 O HOH B 122 -12.285 -8.862 -2.185 1.00 10.98 O \ HETATM 584 O HOH B 123 -19.660 -4.626 -2.597 1.00 17.89 O \ HETATM 585 O HOH B 124 -9.457 11.466 2.387 1.00 12.76 O \ HETATM 586 O HOH B 125 -3.405 9.199 -0.969 1.00 13.55 O \ HETATM 587 O HOH B 126 -19.866 -9.863 -0.921 1.00 21.03 O \ HETATM 588 O HOH B 127 -8.653 0.982 -0.727 1.00 12.45 O \ HETATM 589 O HOH B 128 -20.994 -2.195 -4.554 1.00 15.38 O \ HETATM 590 O HOH B 129 -8.168 5.328 -3.524 1.00 14.55 O \ HETATM 591 O HOH B 130 -21.813 -5.160 -9.451 1.00 24.54 O \ CONECT 1 2 3 6 \ CONECT 2 1 \ CONECT 3 1 4 5 \ CONECT 4 3 \ CONECT 5 3 \ CONECT 6 1 \ CONECT 15 204 \ CONECT 132 218 \ CONECT 182 263 \ CONECT 204 15 \ CONECT 218 132 \ CONECT 263 182 \ CONECT 282 471 \ CONECT 399 485 \ CONECT 449 530 \ CONECT 471 282 \ CONECT 485 399 \ CONECT 530 449 \ MASTER 343 0 1 4 4 0 0 6 581 2 18 6 \ END \ """, "6cdxchainB") cmd.hide("all") cmd.color('grey70', "6cdxchainB") cmd.show('cartoon', "6cdxchainB") cmd.center("6cdxchainB", state=0, origin=1) cmd.zoom("6cdxchainB", animate=-1) cmd.select("e6cdxB1", "c. B & i. 1-36") cmd.color("red", "e6cdxB1") cmd.disable("e6cdxB1")