cmd.read_pdbstr("""\ HEADER RNA BINDING PROTEIN/RNA 18-DEC-06 2OB7 \ TITLE STRUCTURE OF TMRNA-(SMPB)2 COMPLEX AS INFERRED FROM CRYO-EM \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: TRANSFER-MESSENGER RNA; \ COMPND 3 CHAIN: A; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: 16S RIBOSOMAL RNA; \ COMPND 6 CHAIN: D; \ COMPND 7 OTHER_DETAILS: HELIX 44 OF 30S RIBOSOMAL SUBUNIT; \ COMPND 8 MOL_ID: 3; \ COMPND 9 MOLECULE: SSRA-BINDING PROTEIN; \ COMPND 10 CHAIN: B, C \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 3 ORGANISM_TAXID: 274; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 6 ORGANISM_TAXID: 274; \ SOURCE 7 MOL_ID: 3; \ SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 9 ORGANISM_TAXID: 274 \ KEYWDS TMRNA, SMPB, RNA BINDING PROTEIN-RNA COMPLEX \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN B, C; P ATOMS ONLY, CHAIN A, D \ AUTHOR J.FRANK,B.FELDEN,R.GILLET,W.LI \ REVDAT 5 27-DEC-23 2OB7 1 REMARK \ REVDAT 4 18-JUL-18 2OB7 1 REMARK \ REVDAT 3 24-FEB-09 2OB7 1 VERSN \ REVDAT 2 17-APR-07 2OB7 1 JRNL \ REVDAT 1 23-JAN-07 2OB7 0 \ JRNL AUTH R.GILLET,S.KAUR,W.LI,M.HALLIER,B.FELDEN,J.FRANK \ JRNL TITL SCAFFOLDING AS AN ORGANIZING PRINCIPLE IN TRANS-TRANSLATION. \ JRNL TITL 2 THE ROLES OF SMALL PROTEIN B AND RIBOSOMAL PROTEIN S1. \ JRNL REF J.BIOL.CHEM. V. 282 6356 2007 \ JRNL REFN ISSN 0021-9258 \ JRNL PMID 17179154 \ JRNL DOI 10.1074/JBC.M609658200 \ REMARK 1 \ REMARK 1 REFERENCE 1 \ REMARK 1 AUTH S.KAUR,R.GILLET,W.LI,R.GURSKY,J.FRANK \ REMARK 1 TITL CRYO-EM VISUALIZATION OF TRANSFER MESSENGER RNA WITH TWO \ REMARK 1 TITL 2 SMPBS IN A STALLED RIBOSOME \ REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 103 16484 2006 \ REMARK 1 REFN ISSN 0027-8424 \ REMARK 1 REFERENCE 2 \ REMARK 1 AUTH M.VALLE,R.GILLET,K.KAUR,A.HENNE,V.RAMAKRISHNAN,J.FRANK \ REMARK 1 TITL VISUALIZING TMRNA ENTRY INTO A STALLED RIBOSOME \ REMARK 1 REF SCIENCE V. 300 127 2003 \ REMARK 1 REFN ISSN 0036-8075 \ REMARK 2 \ REMARK 2 RESOLUTION. 13.60 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : O, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : 1P6V \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : OTHER \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : METHOD--MANUAL FITTING USING STEREO \ REMARK 3 VISUALIZATION REFINEMENT PROTOCOL--MANUAL \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.820 \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 13.60 \ REMARK 3 NUMBER OF PARTICLES : 52829 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: NULL \ REMARK 4 \ REMARK 4 2OB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-06. \ REMARK 100 THE DEPOSITION ID IS D_1000040916. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : PRE-ACCOMMODATED RIBOSOMAL \ REMARK 245 TRANS-TRANSLATION COMPLEX: T. THERMOPHILUS 70S-MRNA-(P-SITE TRNA) \ REMARK 245 -TMRNA-(SMPB)2-(EF-TU)-GDP-KIRROMYCIN \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 32.00 \ REMARK 245 SAMPLE SUPPORT DETAILS : THIS GRID PLUS SAMPLE WAS KEPT \ REMARK 245 AT -80 DEGREE C FOR SEVERAL \ REMARK 245 DAYS BEFORE USE. \ REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FOR 5 SECONDS BEFORE \ REMARK 245 PLUNGING. RAPID PLUNGE FREEZING \ REMARK 245 IN LIQUID ETHANE. \ REMARK 245 SAMPLE BUFFER : POLIMIX \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : SEE EXPERIMENTAL PROCEDURES IN \ REMARK 245 KAUR ET AL. (PNAS). [DEPOSITION REFERS TO STRUCTURE OF TMRNA- \ REMARK 245 (SMPB)2 COMPLEX DERIVED BY FITTING OF EM MAP FROM KAUR ET AL. \ REMARK 245 FITTING WAS MODIFIED IN GILLET ET AL.] \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : 01-JUN-04 \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 296.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1475.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 3635.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 NOMINAL CS : 2.00 \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1500.00 \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 55000 \ REMARK 245 CALIBRATED MAGNIFICATION : 49000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, B, C \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 GLY B 1 \ REMARK 465 LYS B 2 \ REMARK 465 LYS B 70 \ REMARK 465 HIS B 71 \ REMARK 465 ALA B 72 \ REMARK 465 THR B 73 \ REMARK 465 ILE B 74 \ REMARK 465 GLU B 75 \ REMARK 465 TYR B 131 \ REMARK 465 ASP B 132 \ REMARK 465 ARG B 133 \ REMARK 465 ARG B 134 \ REMARK 465 ARG B 135 \ REMARK 465 GLU B 136 \ REMARK 465 LEU B 137 \ REMARK 465 LYS B 138 \ REMARK 465 GLU B 139 \ REMARK 465 LYS B 140 \ REMARK 465 ALA B 141 \ REMARK 465 MET B 142 \ REMARK 465 LYS B 143 \ REMARK 465 ARG B 144 \ REMARK 465 GLU B 145 \ REMARK 465 LEU B 146 \ REMARK 465 GLU B 147 \ REMARK 465 ARG B 148 \ REMARK 465 GLU B 149 \ REMARK 465 PHE B 150 \ REMARK 465 LYS B 151 \ REMARK 465 GLY B 152 \ REMARK 465 LYS B 153 \ REMARK 465 ILE B 154 \ REMARK 465 HIS B 155 \ REMARK 465 LEU B 156 \ REMARK 465 GLY C 1 \ REMARK 465 LYS C 2 \ REMARK 465 THR C 73 \ REMARK 465 ILE C 74 \ REMARK 465 GLU C 75 \ REMARK 465 LYS C 102 \ REMARK 465 GLY C 103 \ REMARK 465 TYR C 104 \ REMARK 465 THR C 105 \ REMARK 465 ALA C 125 \ REMARK 465 LYS C 126 \ REMARK 465 GLY C 127 \ REMARK 465 LYS C 128 \ REMARK 465 LYS C 129 \ REMARK 465 LEU C 130 \ REMARK 465 TYR C 131 \ REMARK 465 ASP C 132 \ REMARK 465 ARG C 133 \ REMARK 465 ARG C 134 \ REMARK 465 ARG C 135 \ REMARK 465 GLU C 136 \ REMARK 465 LEU C 137 \ REMARK 465 LYS C 138 \ REMARK 465 GLU C 139 \ REMARK 465 LYS C 140 \ REMARK 465 ALA C 141 \ REMARK 465 MET C 142 \ REMARK 465 LYS C 143 \ REMARK 465 ARG C 144 \ REMARK 465 GLU C 145 \ REMARK 465 LEU C 146 \ REMARK 465 GLU C 147 \ REMARK 465 ARG C 148 \ REMARK 465 GLU C 149 \ REMARK 465 PHE C 150 \ REMARK 465 LYS C 151 \ REMARK 465 GLY C 152 \ REMARK 465 LYS C 153 \ REMARK 465 ILE C 154 \ REMARK 465 HIS C 155 \ REMARK 465 LEU C 156 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 P A A 101 P C A 138 1.92 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1PV6 RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF COMPLEX FORMED BY SMPB AND TLD OF TMRNA. \ REMARK 900 RELATED ID: 1N34 RELATED DB: PDB \ REMARK 900 X-RAY STRUCTURE OF 30S SUBUNIT FROM T. THERMOPHILUS (ONLY HELIX 44 \ REMARK 900 DEPOSITED HERE, FOR POSITIONAL REFERENCE) \ REMARK 900 RELATED ID: EMD-1310 RELATED DB: EMDB \ REMARK 900 STALLED 70S RIBOSOME (I.E., WITHOUT ANY CODON IN A SITE) BOUND WITH \ REMARK 900 SMPB \ REMARK 900 RELATED ID: EMD-1311 RELATED DB: EMDB \ REMARK 900 PRE-ACCOMMODATED RIBOSOMAL TRANS-TRANSLATION COMPLEX: T. \ REMARK 900 THERMOPHILUS 70S-MRNA-(P-SITE TRNA)-TMRNA-(SMPB)2-(EF-TU)-GDP- \ REMARK 900 KIRROMYCIN IN THE PRESENCE OF PROTEIN S1 \ REMARK 900 RELATED ID: EMD-1312 RELATED DB: EMDB \ REMARK 900 PRE-ACCOMMODATED RIBOSOMAL TRANS-TRANSLATION COMPLEX: T. \ REMARK 900 THERMOPHILUS 70S-MRNA-(P-SITE TRNA)-TMRNA-(SMPB)2-(EF-TU)-GDP- \ REMARK 900 KIRROMYCIN IN THE ABSENCE OF PROTEIN S1 \ REMARK 900 RELATED ID: 1Q2B RELATED DB: PDB \ REMARK 900 X-RAY STRUCTURE OF EF-TU FITTED INTO PRE-ACCOMMODATED RIBOSOMAL \ REMARK 900 TRANSLATION COMPLEX, PLACED IN THE RIBOSOMAL ENRIVONMENT BY \ REMARK 900 REFERENCE TO S12 AND HELIX 44 OF THE SMALL SUBUNIT, AND HELIX 69 \ REMARK 900 AND GAC OF THE LARGE SUBUNIT (1QZC) \ REMARK 999 \ REMARK 999 SEQUENCE \ REMARK 999 THE DEPOSITED ENTRY IS A MODEL TO FIT THE CRYO-EM \ REMARK 999 MAP OF TMRNA+SMPB(2) FROM THERMUS THERMOPHILUS. \ REMARK 999 THE DEPOSITION INCLUDES 4 CHAINS: \ REMARK 999 CHAIN A: TMRNA MODEL \ REMARK 999 CHAINS B,C: SMPB (FROM 1P6V.PDB CHAIN A, FOR SMPB \ REMARK 999 FROM AQUIFEX AEOLICUS); \ REMARK 999 CHAIN D: HELIX 44 OF 30S RIBOSOMAL SUBUNIT \ REMARK 999 (FROM 1N34.PDB CHAIN A:1406-1496. X-RAY STRUCTURE \ REMARK 999 OF 1N34 IS FROM THERMUS THERMOPHILUS). \ REMARK 999 THE E.COLI MODEL ESCHCOLITM3D-MODEL-72.PDB \ REMARK 999 (HTTP://WWW.AG.AUBURN.EDU/MIRROR/TMRDB/RNA/TMRNA.HTML/) \ REMARK 999 WAS USED AS A TEMPLATE TO BUILD THE MODEL BY REPLACING \ REMARK 999 SEVERAL FRAGMENTS WHICH HAVE X-RAY CRYSTAL AS ALTERNATIVES, \ REMARK 999 AND BY FITTING ALL THE STRUCTURES INTO THE CRYO-EM MAPS. \ REMARK 999 NUCLEOTIDE NUMBERING IN THIS MODEL FOLLOWS E.COLI SEQUENCE. \ REMARK 999 CONSIDERING THE DIFFERENCES BETWEEN TMRNA SEQUENCES FROM \ REMARK 999 E.COLI AND T.THERMOPHILUS, A SMALL NUMBER OF NUCLEOTIDES \ REMARK 999 IN THE TEMPLATE MODEL ARE NOT INCLUDED IN THIS MODEL. \ DBREF 2OB7 A 1 362 PDB 2OB7 2OB7 1 362 \ DBREF 2OB7 D 1406 1496 PDB 2OB7 2OB7 1406 1496 \ DBREF 2OB7 B 1 156 PDB 2OB7 2OB7 1 156 \ DBREF 2OB7 C 1 156 PDB 2OB7 2OB7 1 156 \ SEQRES 1 A 328 G G C G C G U A U U C G A \ SEQRES 2 A 328 C G G G G A C C C A A G G \ SEQRES 3 A 328 U G C A U G C C G A G G G \ SEQRES 4 A 328 G C G G U U G G C C U C G \ SEQRES 5 A 328 U A A A A A G C C G C A A \ SEQRES 6 A 328 C G G C A U A A C U G C C \ SEQRES 7 A 328 A A C A C C A A C U A C G \ SEQRES 8 A 328 C U C U G G C A G C U U A \ SEQRES 9 A 328 A U A A C C U G C U U A C \ SEQRES 10 A 328 C U C U C U C C C U A G C \ SEQRES 11 A 328 C U C C G C U C U U A G G \ SEQRES 12 A 328 A C G G G G A U C A A G A \ SEQRES 13 A 328 G A G G U C A A A C C C A \ SEQRES 14 A 328 A A A G A G A U C G C G U \ SEQRES 15 A 328 G G A A G C C C U G C C U \ SEQRES 16 A 328 G G G G U U G A A G C G U \ SEQRES 17 A 328 U A A A A C U U A A U C A \ SEQRES 18 A 328 G G C U G U U U G U U A G \ SEQRES 19 A 328 U G G C G U G U C C G U C \ SEQRES 20 A 328 C G C A G C U G G C A A G \ SEQRES 21 A 328 C G A A U G U A A A G A C \ SEQRES 22 A 328 U G A C U A A G C A U G A \ SEQRES 23 A 328 C C G A G G A C C U C G G \ SEQRES 24 A 328 A C G C G G G U U C G A U \ SEQRES 25 A 328 U C C C G C A C G C G C C \ SEQRES 26 A 328 U C C \ SEQRES 1 D 86 U C A C G C C A U G G G A \ SEQRES 2 D 86 G C G G G C U C U A C C C \ SEQRES 3 D 86 G A A G U C G C C G G G A \ SEQRES 4 D 86 G C C U A C G G G C A G G \ SEQRES 5 D 86 C G C C G A G G G U A G G \ SEQRES 6 D 86 G C C C G U G A C U G G G \ SEQRES 7 D 86 G C G A A G U C \ SEQRES 1 B 156 GLY LYS SER ASP LYS ILE ILE PRO ILE ALA GLU ASN LYS \ SEQRES 2 B 156 GLU ALA LYS ALA LYS TYR ASP ILE LEU GLU THR TYR GLU \ SEQRES 3 B 156 ALA GLY ILE VAL LEU LYS GLY SER GLU VAL LYS SER LEU \ SEQRES 4 B 156 ARG GLU LYS GLY THR VAL SER PHE LYS ASP SER PHE VAL \ SEQRES 5 B 156 ARG ILE GLU ASN GLY GLU ALA TRP LEU TYR ASN LEU TYR \ SEQRES 6 B 156 ILE ALA PRO TYR LYS HIS ALA THR ILE GLU ASN HIS ASP \ SEQRES 7 B 156 PRO LEU ARG LYS ARG LYS LEU LEU LEU HIS LYS ARG GLU \ SEQRES 8 B 156 ILE MET ARG LEU TYR GLY LYS VAL GLN GLU LYS GLY TYR \ SEQRES 9 B 156 THR ILE ILE PRO LEU LYS LEU TYR TRP LYS ASN ASN LYS \ SEQRES 10 B 156 VAL LYS VAL LEU ILE ALA LEU ALA LYS GLY LYS LYS LEU \ SEQRES 11 B 156 TYR ASP ARG ARG ARG GLU LEU LYS GLU LYS ALA MET LYS \ SEQRES 12 B 156 ARG GLU LEU GLU ARG GLU PHE LYS GLY LYS ILE HIS LEU \ SEQRES 1 C 156 GLY LYS SER ASP LYS ILE ILE PRO ILE ALA GLU ASN LYS \ SEQRES 2 C 156 GLU ALA LYS ALA LYS TYR ASP ILE LEU GLU THR TYR GLU \ SEQRES 3 C 156 ALA GLY ILE VAL LEU LYS GLY SER GLU VAL LYS SER LEU \ SEQRES 4 C 156 ARG GLU LYS GLY THR VAL SER PHE LYS ASP SER PHE VAL \ SEQRES 5 C 156 ARG ILE GLU ASN GLY GLU ALA TRP LEU TYR ASN LEU TYR \ SEQRES 6 C 156 ILE ALA PRO TYR LYS HIS ALA THR ILE GLU ASN HIS ASP \ SEQRES 7 C 156 PRO LEU ARG LYS ARG LYS LEU LEU LEU HIS LYS ARG GLU \ SEQRES 8 C 156 ILE MET ARG LEU TYR GLY LYS VAL GLN GLU LYS GLY TYR \ SEQRES 9 C 156 THR ILE ILE PRO LEU LYS LEU TYR TRP LYS ASN ASN LYS \ SEQRES 10 C 156 VAL LYS VAL LEU ILE ALA LEU ALA LYS GLY LYS LYS LEU \ SEQRES 11 C 156 TYR ASP ARG ARG ARG GLU LEU LYS GLU LYS ALA MET LYS \ SEQRES 12 C 156 ARG GLU LEU GLU ARG GLU PHE LYS GLY LYS ILE HIS LEU \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 329 C A 362 \ TER 416 C D1496 \ TER 539 LEU B 130 \ ATOM 540 CA SER C 3 -44.586 -9.399 -67.569 1.00175.32 C \ ATOM 541 CA ASP C 4 -42.602 -7.937 -64.638 1.00189.75 C \ ATOM 542 CA LYS C 5 -42.498 -10.129 -61.535 1.00164.82 C \ ATOM 543 CA ILE C 6 -41.040 -8.340 -58.499 1.00128.80 C \ ATOM 544 CA ILE C 7 -40.423 -9.242 -54.842 1.00118.91 C \ ATOM 545 CA PRO C 8 -40.106 -6.735 -51.972 1.00101.95 C \ ATOM 546 CA ILE C 9 -36.937 -6.815 -49.869 1.00 89.49 C \ ATOM 547 CA ALA C 10 -37.019 -3.775 -47.597 1.00 71.78 C \ ATOM 548 CA GLU C 11 -38.878 -0.447 -47.452 1.00109.56 C \ ATOM 549 CA ASN C 12 -37.866 2.782 -45.696 1.00103.61 C \ ATOM 550 CA LYS C 13 -40.635 3.704 -43.255 1.00152.92 C \ ATOM 551 CA GLU C 14 -38.421 6.278 -41.554 1.00113.94 C \ ATOM 552 CA ALA C 15 -38.819 8.331 -44.749 1.00 78.15 C \ ATOM 553 CA LYS C 16 -42.469 8.263 -45.753 1.00 96.26 C \ ATOM 554 CA ALA C 17 -43.433 10.711 -43.018 1.00112.82 C \ ATOM 555 CA LYS C 18 -40.380 12.937 -43.377 1.00 92.76 C \ ATOM 556 CA TYR C 19 -39.629 13.933 -46.972 1.00 95.29 C \ ATOM 557 CA ASP C 20 -42.466 14.597 -49.423 1.00 99.96 C \ ATOM 558 CA ILE C 21 -41.425 12.865 -52.649 1.00 71.89 C \ ATOM 559 CA LEU C 22 -40.901 15.000 -55.742 1.00 71.70 C \ ATOM 560 CA GLU C 23 -39.655 12.380 -58.219 1.00 74.32 C \ ATOM 561 CA THR C 24 -38.823 8.674 -58.015 1.00 53.46 C \ ATOM 562 CA TYR C 25 -36.242 6.771 -60.025 1.00 67.90 C \ ATOM 563 CA GLU C 26 -35.461 3.102 -60.315 1.00 81.95 C \ ATOM 564 CA ALA C 27 -32.363 1.405 -58.940 1.00 90.99 C \ ATOM 565 CA GLY C 28 -29.334 -0.210 -60.451 1.00 70.39 C \ ATOM 566 CA ILE C 29 -26.711 -1.244 -57.874 1.00 74.32 C \ ATOM 567 CA VAL C 30 -23.375 -2.907 -58.407 1.00 73.86 C \ ATOM 568 CA LEU C 31 -23.582 -5.371 -55.543 1.00 77.65 C \ ATOM 569 CA LYS C 32 -20.822 -7.679 -54.368 1.00 91.46 C \ ATOM 570 CA GLY C 33 -21.522 -11.393 -54.641 1.00108.43 C \ ATOM 571 CA SER C 34 -21.886 -12.243 -50.976 1.00 86.71 C \ ATOM 572 CA GLU C 35 -24.306 -9.358 -50.543 1.00 91.27 C \ ATOM 573 CA VAL C 36 -26.715 -10.896 -53.039 1.00 75.09 C \ ATOM 574 CA LYS C 37 -26.645 -14.259 -51.310 1.00 98.20 C \ ATOM 575 CA SER C 38 -27.240 -12.704 -47.881 1.00 94.21 C \ ATOM 576 CA LEU C 39 -30.072 -10.726 -49.451 1.00 86.13 C \ ATOM 577 CA ARG C 40 -31.718 -13.931 -50.647 1.00116.88 C \ ATOM 578 CA GLU C 41 -30.900 -15.855 -47.509 1.00140.22 C \ ATOM 579 CA LYS C 42 -33.244 -13.211 -46.034 1.00136.27 C \ ATOM 580 CA GLY C 43 -30.610 -11.231 -44.103 1.00 89.78 C \ ATOM 581 CA THR C 44 -31.360 -7.997 -42.271 1.00137.64 C \ ATOM 582 CA VAL C 45 -31.177 -4.585 -43.997 1.00 78.90 C \ ATOM 583 CA SER C 46 -31.808 -1.010 -42.821 1.00129.20 C \ ATOM 584 CA PHE C 47 -31.941 2.467 -44.307 1.00 91.08 C \ ATOM 585 CA LYS C 48 -31.148 4.226 -41.017 1.00103.01 C \ ATOM 586 CA ASP C 49 -29.192 7.387 -41.766 1.00103.39 C \ ATOM 587 CA SER C 50 -28.720 6.167 -45.346 1.00 71.36 C \ ATOM 588 CA PHE C 51 -28.411 8.780 -48.105 1.00 57.52 C \ ATOM 589 CA VAL C 52 -27.283 9.190 -51.715 1.00 68.22 C \ ATOM 590 CA ARG C 53 -24.441 11.312 -53.087 1.00 83.01 C \ ATOM 591 CA ILE C 54 -23.352 12.199 -56.593 1.00 54.09 C \ ATOM 592 CA GLU C 55 -19.565 12.078 -56.816 1.00 62.17 C \ ATOM 593 CA ASN C 56 -17.468 12.058 -60.000 1.00 76.93 C \ ATOM 594 CA GLY C 57 -20.487 12.061 -62.267 1.00 60.43 C \ ATOM 595 CA GLU C 58 -21.629 8.914 -60.452 1.00 80.36 C \ ATOM 596 CA ALA C 59 -24.484 8.126 -58.021 1.00 63.84 C \ ATOM 597 CA TRP C 60 -23.696 6.536 -54.655 1.00 80.27 C \ ATOM 598 CA LEU C 61 -25.851 4.998 -51.887 1.00 78.58 C \ ATOM 599 CA TYR C 62 -23.978 5.726 -48.680 1.00 76.71 C \ ATOM 600 CA ASN C 63 -25.160 4.060 -45.497 1.00 71.33 C \ ATOM 601 CA LEU C 64 -27.141 0.933 -46.250 1.00 82.29 C \ ATOM 602 CA TYR C 65 -26.634 -1.956 -43.835 1.00 86.62 C \ ATOM 603 CA ILE C 66 -26.712 -5.261 -45.674 1.00 91.43 C \ ATOM 604 CA ALA C 67 -26.320 -8.160 -43.264 1.00 89.06 C \ ATOM 605 CA PRO C 68 -23.359 -10.472 -44.102 1.00135.37 C \ ATOM 606 CA TYR C 69 -23.393 -14.302 -44.093 1.00168.90 C \ ATOM 607 CA LYS C 70 -21.205 -17.407 -43.651 1.00 83.61 C \ ATOM 608 CA HIS C 71 -19.155 -16.894 -46.787 1.00181.92 C \ ATOM 609 CA ALA C 72 -15.840 -16.146 -45.068 1.00160.56 C \ ATOM 610 CA ASN C 76 -14.383 -8.542 -45.689 1.00192.36 C \ ATOM 611 CA HIS C 77 -17.652 -6.991 -46.897 1.00183.05 C \ ATOM 612 CA ASP C 78 -18.102 -3.845 -44.839 1.00118.32 C \ ATOM 613 CA PRO C 79 -21.931 -3.837 -44.395 1.00 68.19 C \ ATOM 614 CA LEU C 80 -21.974 -0.117 -45.209 1.00 88.93 C \ ATOM 615 CA ARG C 81 -19.912 0.260 -48.421 1.00 84.61 C \ ATOM 616 CA LYS C 82 -20.368 3.178 -50.794 1.00 87.61 C \ ATOM 617 CA ARG C 83 -22.419 1.157 -53.306 1.00 71.01 C \ ATOM 618 CA LYS C 84 -22.656 2.512 -56.836 1.00 71.81 C \ ATOM 619 CA LEU C 85 -25.972 3.015 -58.587 1.00 66.19 C \ ATOM 620 CA LEU C 86 -26.645 2.156 -62.261 1.00 53.15 C \ ATOM 621 CA LEU C 87 -28.749 5.054 -63.343 1.00 51.48 C \ ATOM 622 CA HIS C 88 -28.209 6.821 -66.689 1.00 53.52 C \ ATOM 623 CA LYS C 89 -26.021 9.881 -67.021 1.00 64.32 C \ ATOM 624 CA ARG C 90 -28.836 12.208 -67.961 1.00 56.96 C \ ATOM 625 CA GLU C 91 -30.573 10.975 -64.833 1.00 75.88 C \ ATOM 626 CA ILE C 92 -27.622 11.712 -62.633 1.00 59.33 C \ ATOM 627 CA MET C 93 -27.090 15.122 -64.187 1.00 72.77 C \ ATOM 628 CA ARG C 94 -30.818 15.706 -63.756 1.00 65.15 C \ ATOM 629 CA LEU C 95 -30.848 14.725 -60.086 1.00 54.77 C \ ATOM 630 CA TYR C 96 -27.600 16.590 -59.503 1.00 53.57 C \ ATOM 631 CA GLY C 97 -29.062 19.776 -60.955 1.00 63.59 C \ ATOM 632 CA LYS C 98 -32.165 19.758 -58.739 1.00 62.59 C \ ATOM 633 CA VAL C 99 -30.011 19.221 -55.626 1.00 60.90 C \ ATOM 634 CA GLN C 100 -28.225 22.481 -56.354 1.00 65.88 C \ ATOM 635 CA GLU C 101 -30.876 24.717 -57.987 1.00 88.72 C \ ATOM 636 CA ILE C 106 -31.878 12.321 -52.746 1.00 68.50 C \ ATOM 637 CA ILE C 107 -32.848 9.358 -50.512 1.00 80.28 C \ ATOM 638 CA PRO C 108 -33.517 5.595 -50.937 1.00 60.14 C \ ATOM 639 CA LEU C 109 -37.134 4.450 -50.746 1.00 79.89 C \ ATOM 640 CA LYS C 110 -36.818 0.662 -51.077 1.00 66.11 C \ ATOM 641 CA LEU C 111 -34.929 -2.460 -52.088 1.00 89.67 C \ ATOM 642 CA TYR C 112 -36.533 -5.142 -54.183 1.00 83.02 C \ ATOM 643 CA TRP C 113 -36.083 -7.920 -56.692 1.00 84.49 C \ ATOM 644 CA LYS C 114 -37.194 -7.456 -60.299 1.00 78.52 C \ ATOM 645 CA ASN C 115 -36.277 -10.450 -62.428 1.00 84.58 C \ ATOM 646 CA ASN C 116 -33.812 -11.724 -59.832 1.00 98.90 C \ ATOM 647 CA LYS C 117 -32.001 -8.398 -60.166 1.00 93.36 C \ ATOM 648 CA VAL C 118 -31.635 -6.406 -56.963 1.00 60.32 C \ ATOM 649 CA LYS C 119 -32.829 -2.840 -57.259 1.00 65.87 C \ ATOM 650 CA VAL C 120 -33.252 0.216 -55.043 1.00 66.47 C \ ATOM 651 CA LEU C 121 -35.911 2.898 -55.560 1.00 77.69 C \ ATOM 652 CA ILE C 122 -34.552 6.422 -55.328 1.00 61.04 C \ ATOM 653 CA ALA C 123 -36.430 9.681 -54.808 1.00 67.88 C \ ATOM 654 CA LEU C 124 -35.593 13.367 -55.033 1.00 59.13 C \ TER 655 LEU C 124 \ MASTER 249 0 0 0 0 0 0 6 651 4 0 57 \ END \ """, "2ob7chainC") cmd.hide("all") cmd.color('grey70', "2ob7chainC") cmd.show('cartoon', "2ob7chainC") cmd.center("2ob7chainC", state=0, origin=1) cmd.zoom("2ob7chainC", animate=-1) cmd.select("e2ob7C1", "c. C & i. 9-124") cmd.color("red", "e2ob7C1") cmd.disable("e2ob7C1")