cmd.read_pdbstr("""\ HEADER MEMBRANE PROTEIN 26-OCT-07 3B61 \ TITLE EMRE MULTIDRUG TRANSPORTER, APO CRYSTAL FORM \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: MULTIDRUG TRANSPORTER EMRE; \ COMPND 3 CHAIN: A, B, C, D, E, F, G, H; \ COMPND 4 SYNONYM: EFFLUX-MULTIDRUG RESISTANCE PROTEIN EMRE, METHYL VIOLOGEN \ COMPND 5 RESISTANCE PROTEIN C, ETHIDIUM RESISTANCE PROTEIN; \ COMPND 6 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K12; \ SOURCE 3 ORGANISM_TAXID: 83333; \ SOURCE 4 STRAIN: K-12; \ SOURCE 5 GENE: EMRE, EB, MVRC; \ SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); \ SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; \ SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); \ SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; \ SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B \ KEYWDS HELICAL MEMBRANE PROTEIN, MULTIDRUG RESISTANCE TRANSPORTER, SMR, \ KEYWDS 2 ANTIPORT, INNER MEMBRANE, TRANSMEMBRANE, MEMBRANE PROTEIN \ EXPDTA X-RAY DIFFRACTION \ MDLTYP CA ATOMS ONLY, CHAIN A, B, C, D, E, F, G, H \ AUTHOR G.CHANG,Y.J.CHEN \ REVDAT 4 21-FEB-24 3B61 1 REMARK \ REVDAT 3 24-FEB-09 3B61 1 VERSN \ REVDAT 2 26-FEB-08 3B61 1 JRNL \ REVDAT 1 04-DEC-07 3B61 0 \ JRNL AUTH Y.J.CHEN,O.PORNILLOS,S.LIEU,C.MA,A.P.CHEN,G.CHANG \ JRNL TITL X-RAY STRUCTURE OF EMRE SUPPORTS DUAL TOPOLOGY MODEL. \ JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 18999 2007 \ JRNL REFN ISSN 0027-8424 \ JRNL PMID 18024586 \ JRNL DOI 10.1073/PNAS.0709387104 \ REMARK 2 \ REMARK 2 RESOLUTION. 4.50 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : CNS \ REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- \ REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, \ REMARK 3 : READ,RICE,SIMONSON,WARREN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.50 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL \ REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL \ REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 75.8 \ REMARK 3 NUMBER OF REFLECTIONS : 13836 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING SET) : 0.318 \ REMARK 3 FREE R VALUE : 0.362 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 FREE R VALUE TEST SET COUNT : 1369 \ REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : NULL \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.50 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.78 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 38.20 \ REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL \ REMARK 3 BIN R VALUE (WORKING SET) : 0.4920 \ REMARK 3 BIN FREE R VALUE : 0.5480 \ REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 BIN FREE R VALUE TEST SET COUNT : 120 \ REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.050 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 856 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 0 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 262.4 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 6.06000 \ REMARK 3 B22 (A**2) : -16.89000 \ REMARK 3 B33 (A**2) : 10.83000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : 0.00000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM SIGMAA (A) : NULL \ REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL \ REMARK 3 \ REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM C-V SIGMAA (A) : NULL \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 BOND LENGTHS (A) : NULL \ REMARK 3 BOND ANGLES (DEGREES) : NULL \ REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL \ REMARK 3 IMPROPER ANGLES (DEGREES) : NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA \ REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 KSOL : NULL \ REMARK 3 BSOL : NULL \ REMARK 3 \ REMARK 3 NCS MODEL : NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT \ REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL \ REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 PARAMETER FILE 1 : NULL \ REMARK 3 TOPOLOGY FILE 1 : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE CONTAINS CA ATOMS ONLY. \ REMARK 4 \ REMARK 4 3B61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-07. \ REMARK 100 THE DEPOSITION ID IS D_1000045122. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 25-NOV-02 \ REMARK 200 TEMPERATURE (KELVIN) : 100 \ REMARK 200 PH : 4 \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : SSRL \ REMARK 200 BEAMLINE : BL11-1 \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.0057, 1.0089, 1.0067 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CCD \ REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 \ REMARK 200 DATA SCALING SOFTWARE : HKL-2000 \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13836 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 \ REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 75.8 \ REMARK 200 DATA REDUNDANCY : NULL \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : 0.09600 \ REMARK 200 FOR THE DATA SET : 12.2000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.50 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.66 \ REMARK 200 COMPLETENESS FOR SHELL (%) : 38.2 \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: MAD \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD \ REMARK 200 SOFTWARE USED: CNS \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): NULL \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MM NACL, 20 MM SODIUM ACETATE, 200 \ REMARK 280 -600 MM AMMONIUM SULFATE, 15-30% (W/V) PEG-200, AND 0.3-0.6% (W/ \ REMARK 280 V) NG, PH 4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,-Y,Z \ REMARK 290 3555 -X,Y,-Z \ REMARK 290 4555 X,-Y,-Z \ REMARK 290 5555 X,Y+1/2,Z+1/2 \ REMARK 290 6555 -X,-Y+1/2,Z+1/2 \ REMARK 290 7555 -X,Y+1/2,-Z+1/2 \ REMARK 290 8555 X,-Y+1/2,-Z+1/2 \ REMARK 290 9555 X+1/2,Y,Z+1/2 \ REMARK 290 10555 -X+1/2,-Y,Z+1/2 \ REMARK 290 11555 -X+1/2,Y,-Z+1/2 \ REMARK 290 12555 X+1/2,-Y,-Z+1/2 \ REMARK 290 13555 X+1/2,Y+1/2,Z \ REMARK 290 14555 -X+1/2,-Y+1/2,Z \ REMARK 290 15555 -X+1/2,Y+1/2,-Z \ REMARK 290 16555 X+1/2,-Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 142.10000 \ REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 142.10000 \ REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 142.10000 \ REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 142.10000 \ REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 142.10000 \ REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 142.10000 \ REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 142.10000 \ REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 142.10000 \ REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 90.50000 \ REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 119.60000 \ REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2, 3, 4 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 3 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 4 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 MET A 1 \ REMARK 465 ASN A 2 \ REMARK 465 PRO A 3 \ REMARK 465 MET B 1 \ REMARK 465 ASN B 2 \ REMARK 465 PRO B 3 \ REMARK 465 MET C 1 \ REMARK 465 ASN C 2 \ REMARK 465 PRO C 3 \ REMARK 465 MET D 1 \ REMARK 465 ASN D 2 \ REMARK 465 PRO D 3 \ REMARK 465 MET E 1 \ REMARK 465 ASN E 2 \ REMARK 465 PRO E 3 \ REMARK 465 MET F 1 \ REMARK 465 ASN F 2 \ REMARK 465 PRO F 3 \ REMARK 465 MET G 1 \ REMARK 465 ASN G 2 \ REMARK 465 PRO G 3 \ REMARK 465 MET H 1 \ REMARK 465 ASN H 2 \ REMARK 465 PRO H 3 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 3B5D RELATED DB: PDB \ REMARK 900 EMRE-TPP STRUCTURE, C2 CRYSTAL FORM \ REMARK 900 RELATED ID: 3B62 RELATED DB: PDB \ DBREF 3B61 A 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 B 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 C 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 D 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 E 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 F 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 G 1 110 UNP P23895 EMRE_ECOLI 1 110 \ DBREF 3B61 H 1 110 UNP P23895 EMRE_ECOLI 1 110 \ SEQRES 1 A 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 A 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 A 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 A 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 A 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 A 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 A 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 A 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 A 110 SER ARG SER THR PRO HIS \ SEQRES 1 B 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 B 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 B 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 B 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 B 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 B 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 B 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 B 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 B 110 SER ARG SER THR PRO HIS \ SEQRES 1 C 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 C 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 C 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 C 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 C 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 C 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 C 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 C 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 C 110 SER ARG SER THR PRO HIS \ SEQRES 1 D 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 D 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 D 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 D 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 D 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 D 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 D 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 D 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 D 110 SER ARG SER THR PRO HIS \ SEQRES 1 E 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 E 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 E 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 E 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 E 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 E 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 E 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 E 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 E 110 SER ARG SER THR PRO HIS \ SEQRES 1 F 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 F 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 F 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 F 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 F 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 F 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 F 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 F 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 F 110 SER ARG SER THR PRO HIS \ SEQRES 1 G 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 G 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 G 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 G 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 G 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 G 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 G 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 G 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 G 110 SER ARG SER THR PRO HIS \ SEQRES 1 H 110 MET ASN PRO TYR ILE TYR LEU GLY GLY ALA ILE LEU ALA \ SEQRES 2 H 110 GLU VAL ILE GLY THR THR LEU MET LYS PHE SER GLU GLY \ SEQRES 3 H 110 PHE THR ARG LEU TRP PRO SER VAL GLY THR ILE ILE CYS \ SEQRES 4 H 110 TYR CYS ALA SER PHE TRP LEU LEU ALA GLN THR LEU ALA \ SEQRES 5 H 110 TYR ILE PRO THR GLY ILE ALA TYR ALA ILE TRP SER GLY \ SEQRES 6 H 110 VAL GLY ILE VAL LEU ILE SER LEU LEU SER TRP GLY PHE \ SEQRES 7 H 110 PHE GLY GLN ARG LEU ASP LEU PRO ALA ILE ILE GLY MET \ SEQRES 8 H 110 MET LEU ILE CYS ALA GLY VAL LEU ILE ILE ASN LEU LEU \ SEQRES 9 H 110 SER ARG SER THR PRO HIS \ CRYST1 181.000 239.200 284.200 90.00 90.00 90.00 F 2 2 2 128 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.005525 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.004181 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.003519 0.00000 \ TER 108 HIS A 110 \ TER 216 HIS B 110 \ TER 324 HIS C 110 \ ATOM 325 CA TYR D 4 -83.624 -63.370 -39.061 1.00335.88 C \ ATOM 326 CA ILE D 5 -86.752 -64.576 -37.200 1.00335.88 C \ ATOM 327 CA TYR D 6 -87.104 -66.997 -40.162 1.00281.78 C \ ATOM 328 CA LEU D 7 -84.560 -69.482 -38.968 1.00209.33 C \ ATOM 329 CA GLY D 8 -86.111 -68.178 -35.788 1.00308.68 C \ ATOM 330 CA GLY D 9 -89.135 -70.066 -36.996 1.00183.39 C \ ATOM 331 CA ALA D 10 -86.819 -73.014 -36.784 1.00149.88 C \ ATOM 332 CA ILE D 11 -85.460 -71.596 -33.522 1.00157.68 C \ ATOM 333 CA LEU D 12 -88.274 -72.021 -31.019 1.00 96.51 C \ ATOM 334 CA ALA D 13 -89.895 -74.650 -33.302 1.00233.98 C \ ATOM 335 CA GLU D 14 -87.307 -77.026 -32.007 1.00 78.91 C \ ATOM 336 CA VAL D 15 -86.846 -75.560 -28.509 1.00135.64 C \ ATOM 337 CA ILE D 16 -90.565 -76.265 -28.191 1.00335.88 C \ ATOM 338 CA GLY D 17 -90.669 -79.615 -29.807 1.00 60.83 C \ ATOM 339 CA THR D 18 -87.565 -80.165 -27.670 1.00322.02 C \ ATOM 340 CA THR D 19 -89.427 -79.887 -24.407 1.00 92.55 C \ ATOM 341 CA LEU D 20 -92.426 -81.222 -26.280 1.00168.02 C \ ATOM 342 CA MET D 21 -90.433 -84.464 -26.362 1.00296.27 C \ ATOM 343 CA LYS D 22 -89.009 -84.330 -22.838 1.00155.68 C \ ATOM 344 CA PHE D 23 -92.677 -83.715 -22.062 1.00236.29 C \ ATOM 345 CA SER D 24 -94.847 -85.796 -24.493 1.00335.88 C \ ATOM 346 CA GLU D 25 -93.076 -89.034 -23.682 1.00335.88 C \ ATOM 347 CA GLY D 26 -94.080 -87.954 -20.208 1.00335.88 C \ ATOM 348 CA PHE D 27 -90.607 -89.337 -19.788 1.00335.88 C \ ATOM 349 CA THR D 28 -91.977 -92.921 -19.564 1.00335.88 C \ ATOM 350 CA ARG D 29 -94.670 -95.100 -21.342 1.00261.40 C \ ATOM 351 CA LEU D 30 -93.396 -98.480 -22.696 1.00335.88 C \ ATOM 352 CA TRP D 31 -91.824 -98.632 -26.213 1.00335.88 C \ ATOM 353 CA PRO D 32 -88.884 -96.464 -27.404 1.00260.26 C \ ATOM 354 CA SER D 33 -90.881 -93.561 -26.048 1.00218.01 C \ ATOM 355 CA VAL D 34 -88.048 -92.846 -23.656 1.00169.65 C \ ATOM 356 CA GLY D 35 -86.116 -93.035 -26.931 1.00253.06 C \ ATOM 357 CA THR D 36 -88.436 -90.422 -28.317 1.00211.93 C \ ATOM 358 CA ILE D 37 -86.649 -88.131 -25.890 1.00 97.98 C \ ATOM 359 CA ILE D 38 -83.621 -89.193 -27.830 1.00167.56 C \ ATOM 360 CA CYS D 39 -84.967 -87.793 -31.113 1.00147.28 C \ ATOM 361 CA TYR D 40 -86.274 -84.286 -30.189 1.00111.05 C \ ATOM 362 CA CYS D 41 -83.551 -83.331 -27.760 1.00133.55 C \ ATOM 363 CA ALA D 42 -81.581 -83.969 -31.022 1.00149.10 C \ ATOM 364 CA SER D 43 -83.957 -81.435 -32.548 1.00164.38 C \ ATOM 365 CA PHE D 44 -82.544 -79.001 -29.982 1.00 78.13 C \ ATOM 366 CA TRP D 45 -79.328 -79.706 -31.856 1.00102.72 C \ ATOM 367 CA LEU D 46 -80.811 -78.518 -35.128 1.00174.78 C \ ATOM 368 CA LEU D 47 -82.383 -75.570 -33.375 1.00202.29 C \ ATOM 369 CA ALA D 48 -78.928 -74.380 -32.511 1.00186.44 C \ ATOM 370 CA GLN D 49 -78.156 -75.481 -36.069 1.00335.88 C \ ATOM 371 CA THR D 50 -80.344 -72.960 -37.843 1.00156.40 C \ ATOM 372 CA LEU D 51 -78.989 -70.267 -35.529 1.00117.33 C \ ATOM 373 CA ALA D 52 -76.276 -68.485 -37.452 1.00156.64 C \ ATOM 374 CA TYR D 53 -76.105 -64.732 -37.988 1.00247.73 C \ ATOM 375 CA ILE D 54 -73.261 -62.454 -36.881 1.00150.27 C \ ATOM 376 CA PRO D 55 -69.771 -63.756 -35.927 1.00335.88 C \ ATOM 377 CA THR D 56 -70.039 -62.984 -32.202 1.00212.06 C \ ATOM 378 CA GLY D 57 -73.486 -64.554 -32.121 1.00320.64 C \ ATOM 379 CA ILE D 58 -72.086 -67.875 -33.275 1.00335.88 C \ ATOM 380 CA ALA D 59 -69.329 -67.406 -30.694 1.00207.94 C \ ATOM 381 CA TYR D 60 -72.116 -67.233 -28.091 1.00 67.69 C \ ATOM 382 CA ALA D 61 -74.107 -70.063 -29.619 1.00233.50 C \ ATOM 383 CA ILE D 62 -71.523 -72.890 -29.468 1.00294.51 C \ ATOM 384 CA TRP D 63 -70.067 -71.138 -26.397 1.00 68.62 C \ ATOM 385 CA SER D 64 -73.276 -71.917 -24.512 1.00267.44 C \ ATOM 386 CA GLY D 65 -73.146 -75.334 -26.071 1.00189.50 C \ ATOM 387 CA VAL D 66 -69.962 -75.330 -24.015 1.00125.97 C \ ATOM 388 CA GLY D 67 -71.416 -74.868 -20.613 1.00159.61 C \ ATOM 389 CA ILE D 68 -73.636 -77.620 -21.953 1.00119.08 C \ ATOM 390 CA VAL D 69 -70.927 -80.254 -22.508 1.00136.43 C \ ATOM 391 CA LEU D 70 -70.009 -79.264 -19.037 1.00 81.17 C \ ATOM 392 CA ILE D 71 -73.694 -79.710 -18.096 1.00229.87 C \ ATOM 393 CA SER D 72 -72.993 -83.343 -19.042 1.00147.32 C \ ATOM 394 CA LEU D 73 -69.459 -83.980 -17.809 1.00 84.28 C \ ATOM 395 CA LEU D 74 -70.976 -82.664 -14.576 1.00188.58 C \ ATOM 396 CA SER D 75 -74.369 -84.169 -15.507 1.00335.88 C \ ATOM 397 CA TRP D 76 -73.663 -87.254 -13.405 1.00335.88 C \ ATOM 398 CA GLY D 77 -71.105 -84.868 -11.952 1.00293.21 C \ ATOM 399 CA PHE D 78 -68.968 -87.944 -11.487 1.00335.88 C \ ATOM 400 CA PHE D 79 -68.120 -87.189 -7.829 1.00326.92 C \ ATOM 401 CA GLY D 80 -71.395 -85.654 -6.683 1.00335.88 C \ ATOM 402 CA GLN D 81 -73.664 -82.660 -7.424 1.00335.88 C \ ATOM 403 CA ARG D 82 -74.724 -81.256 -4.032 1.00332.08 C \ ATOM 404 CA LEU D 83 -71.942 -81.539 -1.411 1.00335.88 C \ ATOM 405 CA ASP D 84 -68.935 -79.549 -0.208 1.00308.17 C \ ATOM 406 CA LEU D 85 -67.402 -81.329 -3.169 1.00119.89 C \ ATOM 407 CA PRO D 86 -65.110 -82.603 -2.869 1.00285.56 C \ ATOM 408 CA ALA D 87 -65.249 -82.436 0.942 1.00283.99 C \ ATOM 409 CA ILE D 88 -62.147 -80.561 -0.300 1.00198.73 C \ ATOM 410 CA ILE D 89 -63.829 -77.547 -1.904 1.00120.82 C \ ATOM 411 CA GLY D 90 -64.242 -77.153 1.767 1.00209.19 C \ ATOM 412 CA MET D 91 -60.928 -78.687 2.790 1.00278.54 C \ ATOM 413 CA MET D 92 -58.992 -76.303 0.571 1.00220.98 C \ ATOM 414 CA LEU D 93 -60.963 -73.635 2.414 1.00148.92 C \ ATOM 415 CA ILE D 94 -60.517 -74.902 6.005 1.00158.90 C \ ATOM 416 CA CYS D 95 -56.952 -75.993 5.721 1.00123.68 C \ ATOM 417 CA ALA D 96 -56.069 -72.818 3.753 1.00158.79 C \ ATOM 418 CA GLY D 97 -57.062 -70.801 6.809 1.00225.54 C \ ATOM 419 CA VAL D 98 -54.715 -72.850 9.001 1.00138.10 C \ ATOM 420 CA LEU D 99 -52.042 -71.785 6.513 1.00254.46 C \ ATOM 421 CA ILE D 100 -52.810 -68.160 7.208 1.00123.35 C \ ATOM 422 CA ILE D 101 -52.331 -69.186 10.844 1.00170.45 C \ ATOM 423 CA ASN D 102 -49.028 -70.963 10.277 1.00207.29 C \ ATOM 424 CA LEU D 103 -47.411 -68.044 8.404 1.00248.29 C \ ATOM 425 CA LEU D 104 -49.193 -64.850 9.527 1.00174.08 C \ ATOM 426 CA SER D 105 -50.064 -66.081 13.031 1.00335.88 C \ ATOM 427 CA ARG D 106 -46.648 -67.718 13.716 1.00335.88 C \ ATOM 428 CA SER D 107 -44.879 -64.352 13.252 1.00335.88 C \ ATOM 429 CA THR D 108 -47.346 -62.039 15.098 1.00335.88 C \ ATOM 430 CA PRO D 109 -48.585 -63.827 18.235 1.00335.88 C \ ATOM 431 CA HIS D 110 -46.637 -67.092 18.770 1.00335.88 C \ TER 432 HIS D 110 \ TER 540 HIS E 110 \ TER 648 HIS F 110 \ TER 756 HIS G 110 \ TER 864 HIS H 110 \ MASTER 314 0 0 0 0 0 0 6 856 8 0 72 \ END \ """, "3b61chainD") cmd.hide("all") cmd.color('grey70', "3b61chainD") cmd.show('cartoon', "3b61chainD") cmd.center("3b61chainD", state=0, origin=1) cmd.zoom("3b61chainD", animate=-1) cmd.select("e3b61D1", "c. D & i. 4-110") cmd.color("red", "e3b61D1") cmd.disable("e3b61D1")