cmd.read_pdbstr("""\ HEADER TOXIN/ANTITOXIN 19-SEP-18 6IFC \ TITLE CRYSTAL STRUCTURE OF VAPBC FROM SALMONELLA TYPHIMURIUM \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: TRNA(FMET)-SPECIFIC ENDONUCLEASE VAPC; \ COMPND 3 CHAIN: A, C, E, G; \ COMPND 4 SYNONYM: RNASE VAPC,TOXIN VAPC; \ COMPND 5 EC: 3.1.-.-; \ COMPND 6 ENGINEERED: YES; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: ANTITOXIN VAPB; \ COMPND 9 CHAIN: B, F; \ COMPND 10 ENGINEERED: YES; \ COMPND 11 MOL_ID: 3; \ COMPND 12 MOLECULE: ANTITOXIN VAPB; \ COMPND 13 CHAIN: D, H; \ COMPND 14 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / \ SOURCE 3 ATCC 700720); \ SOURCE 4 ORGANISM_TAXID: 99287; \ SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; \ SOURCE 6 GENE: VAPC, STM3033; \ SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 9 MOL_ID: 2; \ SOURCE 10 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / \ SOURCE 11 ATCC 700720); \ SOURCE 12 ORGANISM_TAXID: 99287; \ SOURCE 13 STRAIN: LT2 / SGSC1412 / ATCC 700720; \ SOURCE 14 GENE: VAPB, STM3034; \ SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 17 MOL_ID: 3; \ SOURCE 18 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / \ SOURCE 19 ATCC 700720); \ SOURCE 20 ORGANISM_TAXID: 99287; \ SOURCE 21 STRAIN: LT2 / SGSC1412 / ATCC 700720; \ SOURCE 22 GENE: VAPB, STM3034; \ SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562 \ KEYWDS TOXIN-ANTITOXIN, TOXIN-ANTITOXIN COMPLEX \ EXPDTA X-RAY DIFFRACTION \ AUTHOR D.W.PARK,B.J.LEE \ REVDAT 3 22-NOV-23 6IFC 1 LINK \ REVDAT 2 26-FEB-20 6IFC 1 JRNL \ REVDAT 1 29-JAN-20 6IFC 0 \ JRNL AUTH D.PARK,H.J.YOON,K.Y.LEE,S.J.PARK,S.H.CHEON,H.H.LEE,S.J.LEE, \ JRNL AUTH 2 B.J.LEE \ JRNL TITL CRYSTAL STRUCTURE OF PROTEOLYZED VAPBC AND DNA-BOUND VAPBC \ JRNL TITL 2 FROM SALMONELLA ENTERICA TYPHIMURIUM LT2 AND VAPC AS A \ JRNL TITL 3 PUTATIVE CA2+-DEPENDENT RIBONUCLEASE. \ JRNL REF FASEB J. V. 34 3051 2020 \ JRNL REFN ESSN 1530-6860 \ JRNL PMID 31908032 \ JRNL DOI 10.1096/FJ.201901989R \ REMARK 2 \ REMARK 2 RESOLUTION. 1.99 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.8.0049 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.47 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL \ REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 \ REMARK 3 NUMBER OF REFLECTIONS : 36229 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 \ REMARK 3 R VALUE (WORKING SET) : 0.175 \ REMARK 3 FREE R VALUE : 0.238 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 1905 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : 20 \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 2581 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.46 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 \ REMARK 3 BIN FREE R VALUE SET COUNT : 141 \ REMARK 3 BIN FREE R VALUE : 0.2690 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 4976 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 4 \ REMARK 3 SOLVENT ATOMS : 206 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.65 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 1.53000 \ REMARK 3 B22 (A**2) : -0.98000 \ REMARK 3 B33 (A**2) : -0.28000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : -0.17000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.211 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.751 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5070 ; 0.016 ; 0.019 \ REMARK 3 BOND LENGTHS OTHERS (A): 4824 ; 0.001 ; 0.020 \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6848 ; 1.590 ; 1.951 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): 11082 ; 0.837 ; 3.000 \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 620 ; 6.165 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;35.912 ;23.388 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 892 ;15.613 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;19.388 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 760 ; 0.092 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5698 ; 0.007 ; 0.021 \ REMARK 3 GENERAL PLANES OTHERS (A): 1182 ; 0.001 ; 0.020 \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2504 ; 3.002 ; 3.380 \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2503 ; 2.994 ; 3.379 \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3116 ; 4.257 ; 5.042 \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3117 ; 4.256 ; 5.044 \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2566 ; 3.919 ; 3.860 \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2567 ; 3.918 ; 3.861 \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3733 ; 6.022 ; 5.616 \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6018 ; 8.057 ;27.512 \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5976 ; 8.056 ;27.451 \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING \ REMARK 3 POSITIONS \ REMARK 4 \ REMARK 4 6IFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-SEP-18. \ REMARK 100 THE DEPOSITION ID IS D_1300008902. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 01-DEC-16 \ REMARK 200 TEMPERATURE (KELVIN) : 293 \ REMARK 200 PH : NULL \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : PAL/PLS \ REMARK 200 BEAMLINE : 5C (4A) \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CCD \ REMARK 200 DETECTOR MANUFACTURER : NONIUS KAPPA CCD \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 \ REMARK 200 DATA SCALING SOFTWARE : HKL-2000 \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38222 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 \ REMARK 200 RESOLUTION RANGE LOW (A) : 57.470 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 \ REMARK 200 DATA REDUNDANCY : 4.500 \ REMARK 200 R MERGE (I) : 0.09000 \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 25.6100 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: MOLREP \ REMARK 200 STARTING MODEL: 3TND \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 42.53 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M CAPS/ \ REMARK 280 SODIUM HYDROXIDE PH 10.5, 2M AMMONIUM SULFATE, VAPOR DIFFUSION, \ REMARK 280 SITTING DROP, TEMPERATURE 293K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.47100 \ REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1, 2 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 8020 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 13610 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 350 \ REMARK 350 BIOMOLECULE: 2 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 8260 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 13400 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 ILE D 39 \ REMARK 465 ILE H 39 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC \ REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 \ REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A \ REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 \ REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE \ REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. \ REMARK 500 \ REMARK 500 DISTANCE CUTOFF: \ REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS \ REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE \ REMARK 500 OE2 GLU C 68 OE1 GLN E 75 1554 2.14 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 ARG A 55 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES \ REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES \ REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES \ REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 MET B 61 50.07 39.03 \ REMARK 500 LYS C 18 59.41 36.37 \ REMARK 500 SER C 31 -1.96 69.48 \ REMARK 500 ASP C 73 -169.50 -101.96 \ REMARK 500 GLU D 65 75.45 71.45 \ REMARK 500 SER E 31 -0.51 73.83 \ REMARK 500 ALA E 52 64.97 -115.41 \ REMARK 500 GLU F 65 102.98 65.22 \ REMARK 500 SER G 31 -0.91 72.87 \ REMARK 500 GLU H 65 65.75 77.24 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 620 \ REMARK 620 METAL COORDINATION \ REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 CA A 201 CA \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 ASP A 7 OD2 \ REMARK 620 2 ASP A 98 OD1 112.7 \ REMARK 620 N 1 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 CA C 201 CA \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 ASP C 7 OD2 \ REMARK 620 2 ASP C 98 OD1 130.3 \ REMARK 620 N 1 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 CA E 201 CA \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 ASP E 7 OD2 \ REMARK 620 2 HOH E 316 O 100.2 \ REMARK 620 N 1 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 CA G 201 CA \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 ASP G 7 OD2 \ REMARK 620 2 ASP G 98 OD1 127.6 \ REMARK 620 N 1 \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: AC1 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC2 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC3 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue CA E 201 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC4 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 201 \ DBREF 6IFC A 1 132 UNP Q8ZM86 VAPC_SALTY 1 132 \ DBREF 6IFC B 46 67 UNP Q7CPV2 VAPB_SALTY 46 67 \ DBREF 6IFC C 1 132 UNP Q8ZM86 VAPC_SALTY 1 132 \ DBREF 6IFC D 39 67 UNP Q7CPV2 VAPB_SALTY 39 67 \ DBREF 6IFC E 1 132 UNP Q8ZM86 VAPC_SALTY 1 132 \ DBREF 6IFC F 46 67 UNP Q7CPV2 VAPB_SALTY 46 67 \ DBREF 6IFC G 1 132 UNP Q8ZM86 VAPC_SALTY 1 132 \ DBREF 6IFC H 39 67 UNP Q7CPV2 VAPB_SALTY 39 67 \ SEQRES 1 A 132 MET LEU LYS PHE MET LEU ASP THR ASN THR CYS ILE PHE \ SEQRES 2 A 132 THR ILE LYS ASN LYS PRO GLU HIS ILE ARG GLU ARG PHE \ SEQRES 3 A 132 ASN LEU ASN THR SER ARG MET CYS ILE SER SER ILE THR \ SEQRES 4 A 132 LEU MET GLU LEU ILE TYR GLY ALA GLU LYS SER LEU ALA \ SEQRES 5 A 132 PRO GLU ARG ASN LEU ALA VAL VAL GLU GLY PHE ILE SER \ SEQRES 6 A 132 ARG LEU GLU VAL LEU ASP TYR ASP THR GLN ALA ALA ILE \ SEQRES 7 A 132 HIS THR GLY GLN ILE ARG ALA GLU LEU ALA ARG LYS GLY \ SEQRES 8 A 132 THR PRO VAL GLY PRO TYR ASP GLN MET ILE ALA GLY HIS \ SEQRES 9 A 132 ALA GLY SER ARG GLY LEU VAL VAL VAL THR ASN ASN LEU \ SEQRES 10 A 132 ARG GLU PHE GLU ARG ILE PRO GLY ILE ARG ILE GLU ASP \ SEQRES 11 A 132 TRP CYS \ SEQRES 1 B 22 SER TRP ASP SER TRP PHE ASP GLY GLU GLY ALA SER THR \ SEQRES 2 B 22 ASP PHE MET SER THR ARG GLU GLN PRO \ SEQRES 1 C 132 MET LEU LYS PHE MET LEU ASP THR ASN THR CYS ILE PHE \ SEQRES 2 C 132 THR ILE LYS ASN LYS PRO GLU HIS ILE ARG GLU ARG PHE \ SEQRES 3 C 132 ASN LEU ASN THR SER ARG MET CYS ILE SER SER ILE THR \ SEQRES 4 C 132 LEU MET GLU LEU ILE TYR GLY ALA GLU LYS SER LEU ALA \ SEQRES 5 C 132 PRO GLU ARG ASN LEU ALA VAL VAL GLU GLY PHE ILE SER \ SEQRES 6 C 132 ARG LEU GLU VAL LEU ASP TYR ASP THR GLN ALA ALA ILE \ SEQRES 7 C 132 HIS THR GLY GLN ILE ARG ALA GLU LEU ALA ARG LYS GLY \ SEQRES 8 C 132 THR PRO VAL GLY PRO TYR ASP GLN MET ILE ALA GLY HIS \ SEQRES 9 C 132 ALA GLY SER ARG GLY LEU VAL VAL VAL THR ASN ASN LEU \ SEQRES 10 C 132 ARG GLU PHE GLU ARG ILE PRO GLY ILE ARG ILE GLU ASP \ SEQRES 11 C 132 TRP CYS \ SEQRES 1 D 29 ILE ILE THR PRO VAL GLY GLU SER TRP ASP SER TRP PHE \ SEQRES 2 D 29 ASP GLY GLU GLY ALA SER THR ASP PHE MET SER THR ARG \ SEQRES 3 D 29 GLU GLN PRO \ SEQRES 1 E 132 MET LEU LYS PHE MET LEU ASP THR ASN THR CYS ILE PHE \ SEQRES 2 E 132 THR ILE LYS ASN LYS PRO GLU HIS ILE ARG GLU ARG PHE \ SEQRES 3 E 132 ASN LEU ASN THR SER ARG MET CYS ILE SER SER ILE THR \ SEQRES 4 E 132 LEU MET GLU LEU ILE TYR GLY ALA GLU LYS SER LEU ALA \ SEQRES 5 E 132 PRO GLU ARG ASN LEU ALA VAL VAL GLU GLY PHE ILE SER \ SEQRES 6 E 132 ARG LEU GLU VAL LEU ASP TYR ASP THR GLN ALA ALA ILE \ SEQRES 7 E 132 HIS THR GLY GLN ILE ARG ALA GLU LEU ALA ARG LYS GLY \ SEQRES 8 E 132 THR PRO VAL GLY PRO TYR ASP GLN MET ILE ALA GLY HIS \ SEQRES 9 E 132 ALA GLY SER ARG GLY LEU VAL VAL VAL THR ASN ASN LEU \ SEQRES 10 E 132 ARG GLU PHE GLU ARG ILE PRO GLY ILE ARG ILE GLU ASP \ SEQRES 11 E 132 TRP CYS \ SEQRES 1 F 22 SER TRP ASP SER TRP PHE ASP GLY GLU GLY ALA SER THR \ SEQRES 2 F 22 ASP PHE MET SER THR ARG GLU GLN PRO \ SEQRES 1 G 132 MET LEU LYS PHE MET LEU ASP THR ASN THR CYS ILE PHE \ SEQRES 2 G 132 THR ILE LYS ASN LYS PRO GLU HIS ILE ARG GLU ARG PHE \ SEQRES 3 G 132 ASN LEU ASN THR SER ARG MET CYS ILE SER SER ILE THR \ SEQRES 4 G 132 LEU MET GLU LEU ILE TYR GLY ALA GLU LYS SER LEU ALA \ SEQRES 5 G 132 PRO GLU ARG ASN LEU ALA VAL VAL GLU GLY PHE ILE SER \ SEQRES 6 G 132 ARG LEU GLU VAL LEU ASP TYR ASP THR GLN ALA ALA ILE \ SEQRES 7 G 132 HIS THR GLY GLN ILE ARG ALA GLU LEU ALA ARG LYS GLY \ SEQRES 8 G 132 THR PRO VAL GLY PRO TYR ASP GLN MET ILE ALA GLY HIS \ SEQRES 9 G 132 ALA GLY SER ARG GLY LEU VAL VAL VAL THR ASN ASN LEU \ SEQRES 10 G 132 ARG GLU PHE GLU ARG ILE PRO GLY ILE ARG ILE GLU ASP \ SEQRES 11 G 132 TRP CYS \ SEQRES 1 H 29 ILE ILE THR PRO VAL GLY GLU SER TRP ASP SER TRP PHE \ SEQRES 2 H 29 ASP GLY GLU GLY ALA SER THR ASP PHE MET SER THR ARG \ SEQRES 3 H 29 GLU GLN PRO \ HET CA A 201 1 \ HET CA C 201 1 \ HET CA E 201 1 \ HET CA G 201 1 \ HETNAM CA CALCIUM ION \ FORMUL 9 CA 4(CA 2+) \ FORMUL 13 HOH *206(H2 O) \ HELIX 1 AA1 ASP A 7 LYS A 18 1 12 \ HELIX 2 AA2 PRO A 19 ASN A 29 1 11 \ HELIX 3 AA3 SER A 37 SER A 50 1 14 \ HELIX 4 AA4 ALA A 52 ARG A 66 1 15 \ HELIX 5 AA5 ASP A 73 LYS A 90 1 18 \ HELIX 6 AA6 GLY A 95 ARG A 108 1 14 \ HELIX 7 AA7 ASN A 116 GLU A 121 1 6 \ HELIX 8 AA8 TRP B 47 ASP B 52 1 6 \ HELIX 9 AA9 ASP C 7 LYS C 18 1 12 \ HELIX 10 AB1 PRO C 19 ASN C 29 1 11 \ HELIX 11 AB2 SER C 37 SER C 50 1 14 \ HELIX 12 AB3 ALA C 52 SER C 65 1 14 \ HELIX 13 AB4 ASP C 73 GLY C 91 1 19 \ HELIX 14 AB5 GLY C 95 ARG C 108 1 14 \ HELIX 15 AB6 ASN C 116 ARG C 122 1 7 \ HELIX 16 AB7 SER D 46 ASP D 52 1 7 \ HELIX 17 AB8 ASP E 7 LYS E 18 1 12 \ HELIX 18 AB9 PRO E 19 ASN E 29 1 11 \ HELIX 19 AC1 SER E 37 SER E 50 1 14 \ HELIX 20 AC2 ALA E 52 ARG E 66 1 15 \ HELIX 21 AC3 ASP E 73 GLY E 91 1 19 \ HELIX 22 AC4 GLY E 95 ARG E 108 1 14 \ HELIX 23 AC5 ASN E 116 GLU E 121 1 6 \ HELIX 24 AC6 TRP F 47 ASP F 52 1 6 \ HELIX 25 AC7 ASP G 7 LYS G 18 1 12 \ HELIX 26 AC8 PRO G 19 ASN G 29 1 11 \ HELIX 27 AC9 SER G 37 SER G 50 1 14 \ HELIX 28 AD1 ALA G 52 SER G 65 1 14 \ HELIX 29 AD2 ASP G 73 GLY G 91 1 19 \ HELIX 30 AD3 GLY G 95 ARG G 108 1 14 \ HELIX 31 AD4 ASN G 116 GLU G 121 1 6 \ HELIX 32 AD5 SER H 46 GLY H 53 1 8 \ SHEET 1 AA110 GLU A 68 LEU A 70 0 \ SHEET 2 AA110 MET A 33 SER A 36 1 N ILE A 35 O LEU A 70 \ SHEET 3 AA110 PHE A 4 LEU A 6 1 N LEU A 6 O CYS A 34 \ SHEET 4 AA110 VAL A 111 VAL A 113 1 O VAL A 111 N MET A 5 \ SHEET 5 AA110 ARG A 127 GLU A 129 1 O ARG A 127 N VAL A 112 \ SHEET 6 AA110 ILE E 128 ASP E 130 1 O ASP E 130 N ILE A 128 \ SHEET 7 AA110 VAL E 111 VAL E 113 1 N VAL E 112 O GLU E 129 \ SHEET 8 AA110 PHE E 4 LEU E 6 1 N MET E 5 O VAL E 111 \ SHEET 9 AA110 MET E 33 SER E 36 1 O CYS E 34 N LEU E 6 \ SHEET 10 AA110 GLU E 68 LEU E 70 1 O LEU E 70 N ILE E 35 \ SHEET 1 AA2 5 GLU C 68 LEU C 70 0 \ SHEET 2 AA2 5 MET C 33 SER C 36 1 N ILE C 35 O LEU C 70 \ SHEET 3 AA2 5 PHE C 4 LEU C 6 1 N LEU C 6 O CYS C 34 \ SHEET 4 AA2 5 VAL C 111 VAL C 113 1 O VAL C 111 N MET C 5 \ SHEET 5 AA2 5 ILE C 128 GLU C 129 1 O GLU C 129 N VAL C 112 \ SHEET 1 AA3 5 GLU G 68 LEU G 70 0 \ SHEET 2 AA3 5 MET G 33 SER G 36 1 N ILE G 35 O LEU G 70 \ SHEET 3 AA3 5 PHE G 4 LEU G 6 1 N LEU G 6 O CYS G 34 \ SHEET 4 AA3 5 VAL G 111 VAL G 113 1 O VAL G 111 N MET G 5 \ SHEET 5 AA3 5 ILE G 128 GLU G 129 1 O GLU G 129 N VAL G 112 \ LINK OD2 ASP A 7 CA CA A 201 1555 1555 2.74 \ LINK OD1 ASP A 98 CA CA A 201 1555 1555 2.64 \ LINK OD2 ASP C 7 CA CA C 201 1555 1555 2.57 \ LINK OD1 ASP C 98 CA CA C 201 1555 1555 2.99 \ LINK OD2 ASP E 7 CA CA E 201 1555 1555 2.89 \ LINK CA CA E 201 O HOH E 316 1555 1555 2.99 \ LINK OD2 ASP G 7 CA CA G 201 1555 1555 2.88 \ LINK OD1 ASP G 98 CA CA G 201 1555 1555 2.78 \ SITE 1 AC1 5 ASP A 7 THR A 8 ASP A 98 ILE A 101 \ SITE 2 AC1 5 ARG B 64 \ SITE 1 AC2 5 ASP C 7 THR C 8 ASN C 9 ASP C 98 \ SITE 2 AC2 5 ARG D 64 \ SITE 1 AC3 6 ASP E 7 THR E 8 ASN E 9 ASP E 98 \ SITE 2 AC3 6 HOH E 316 ARG F 64 \ SITE 1 AC4 5 ASP G 7 THR G 8 ASN G 9 ASP G 98 \ SITE 2 AC4 5 ARG H 64 \ CRYST1 53.956 114.942 53.998 90.00 114.12 90.00 P 1 21 1 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.018534 0.000000 0.008299 0.00000 \ SCALE2 0.000000 0.008700 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.020291 0.00000 \ TER 1046 CYS A 132 \ TER 1225 PRO B 67 \ TER 2271 CYS C 132 \ TER 2492 PRO D 67 \ TER 3538 CYS E 132 \ TER 3717 PRO F 67 \ TER 4763 CYS G 132 \ ATOM 4764 N ILE H 40 -42.617 28.130 56.858 1.00 54.70 N \ ATOM 4765 CA ILE H 40 -42.778 26.745 57.416 1.00 56.92 C \ ATOM 4766 C ILE H 40 -42.794 25.787 56.235 1.00 56.95 C \ ATOM 4767 O ILE H 40 -41.940 24.920 56.114 1.00 56.68 O \ ATOM 4768 CB ILE H 40 -44.077 26.574 58.232 1.00 56.47 C \ ATOM 4769 CG1 ILE H 40 -44.207 27.687 59.278 1.00 59.47 C \ ATOM 4770 CG2 ILE H 40 -44.116 25.194 58.897 1.00 56.29 C \ ATOM 4771 CD1 ILE H 40 -45.648 27.956 59.682 1.00 63.60 C \ ATOM 4772 N THR H 41 -43.773 25.984 55.364 1.00 53.85 N \ ATOM 4773 CA THR H 41 -43.864 25.301 54.098 1.00 54.52 C \ ATOM 4774 C THR H 41 -43.180 26.224 53.105 1.00 53.16 C \ ATOM 4775 O THR H 41 -43.623 27.353 52.900 1.00 54.63 O \ ATOM 4776 CB THR H 41 -45.334 25.125 53.690 1.00 56.65 C \ ATOM 4777 OG1 THR H 41 -45.996 24.321 54.672 1.00 57.02 O \ ATOM 4778 CG2 THR H 41 -45.454 24.474 52.301 1.00 58.30 C \ ATOM 4779 N PRO H 42 -42.074 25.781 52.506 1.00 48.35 N \ ATOM 4780 CA PRO H 42 -41.527 26.717 51.524 1.00 46.31 C \ ATOM 4781 C PRO H 42 -42.477 26.799 50.349 1.00 48.87 C \ ATOM 4782 O PRO H 42 -43.140 25.793 50.012 1.00 46.09 O \ ATOM 4783 CB PRO H 42 -40.202 26.084 51.093 1.00 46.32 C \ ATOM 4784 CG PRO H 42 -40.228 24.690 51.631 1.00 49.95 C \ ATOM 4785 CD PRO H 42 -41.173 24.665 52.798 1.00 46.56 C \ ATOM 4786 N VAL H 43 -42.557 27.983 49.741 1.00 49.39 N \ ATOM 4787 CA VAL H 43 -43.442 28.202 48.592 1.00 50.94 C \ ATOM 4788 C VAL H 43 -42.715 28.939 47.466 1.00 50.76 C \ ATOM 4789 O VAL H 43 -41.735 29.677 47.696 1.00 52.94 O \ ATOM 4790 CB VAL H 43 -44.748 28.943 48.995 1.00 52.49 C \ ATOM 4791 CG1 VAL H 43 -45.706 27.981 49.690 1.00 54.78 C \ ATOM 4792 CG2 VAL H 43 -44.451 30.160 49.874 1.00 53.89 C \ ATOM 4793 N GLY H 44 -43.183 28.714 46.246 1.00 48.07 N \ ATOM 4794 CA GLY H 44 -42.641 29.408 45.086 1.00 49.35 C \ ATOM 4795 C GLY H 44 -43.165 30.830 45.047 1.00 47.89 C \ ATOM 4796 O GLY H 44 -43.696 31.345 46.047 1.00 46.29 O \ ATOM 4797 N GLU H 45 -42.994 31.486 43.902 1.00 46.45 N \ ATOM 4798 CA GLU H 45 -43.654 32.773 43.666 1.00 43.42 C \ ATOM 4799 C GLU H 45 -45.134 32.523 43.605 1.00 38.04 C \ ATOM 4800 O GLU H 45 -45.562 31.402 43.316 1.00 33.30 O \ ATOM 4801 CB GLU H 45 -43.223 33.380 42.360 1.00 42.18 C \ ATOM 4802 CG GLU H 45 -41.771 33.769 42.356 1.00 43.08 C \ ATOM 4803 CD GLU H 45 -41.418 34.382 41.022 1.00 51.16 C \ ATOM 4804 OE1 GLU H 45 -41.183 33.609 40.059 1.00 47.21 O \ ATOM 4805 OE2 GLU H 45 -41.420 35.629 40.933 1.00 61.15 O \ ATOM 4806 N SER H 46 -45.917 33.542 43.884 1.00 35.44 N \ ATOM 4807 CA SER H 46 -47.368 33.326 43.993 1.00 39.62 C \ ATOM 4808 C SER H 46 -47.930 32.855 42.679 1.00 35.72 C \ ATOM 4809 O SER H 46 -47.493 33.261 41.569 1.00 36.41 O \ ATOM 4810 CB SER H 46 -48.106 34.587 44.453 1.00 42.18 C \ ATOM 4811 OG SER H 46 -48.152 35.512 43.404 1.00 40.83 O \ ATOM 4812 N TRP H 47 -48.886 31.956 42.781 1.00 39.17 N \ ATOM 4813 CA TRP H 47 -49.690 31.660 41.603 1.00 39.75 C \ ATOM 4814 C TRP H 47 -50.377 32.889 40.971 1.00 37.89 C \ ATOM 4815 O TRP H 47 -50.437 33.023 39.737 1.00 35.72 O \ ATOM 4816 CB TRP H 47 -50.684 30.577 41.927 1.00 37.78 C \ ATOM 4817 CG TRP H 47 -50.058 29.236 41.806 1.00 32.87 C \ ATOM 4818 CD1 TRP H 47 -49.933 28.309 42.775 1.00 31.86 C \ ATOM 4819 CD2 TRP H 47 -49.490 28.667 40.620 1.00 30.59 C \ ATOM 4820 NE1 TRP H 47 -49.326 27.174 42.278 1.00 32.31 N \ ATOM 4821 CE2 TRP H 47 -49.039 27.379 40.952 1.00 32.53 C \ ATOM 4822 CE3 TRP H 47 -49.295 29.134 39.325 1.00 32.05 C \ ATOM 4823 CZ2 TRP H 47 -48.420 26.547 40.028 1.00 35.70 C \ ATOM 4824 CZ3 TRP H 47 -48.672 28.310 38.402 1.00 29.32 C \ ATOM 4825 CH2 TRP H 47 -48.254 27.028 38.757 1.00 33.04 C \ ATOM 4826 N ASP H 48 -50.852 33.800 41.809 1.00 40.74 N \ ATOM 4827 CA ASP H 48 -51.530 35.021 41.321 1.00 40.52 C \ ATOM 4828 C ASP H 48 -50.612 35.850 40.436 1.00 39.90 C \ ATOM 4829 O ASP H 48 -51.031 36.336 39.387 1.00 41.29 O \ ATOM 4830 CB ASP H 48 -52.056 35.881 42.488 1.00 39.49 C \ ATOM 4831 CG ASP H 48 -53.247 35.265 43.160 1.00 41.46 C \ ATOM 4832 OD1 ASP H 48 -53.863 34.345 42.595 1.00 42.80 O \ ATOM 4833 OD2 ASP H 48 -53.589 35.707 44.263 1.00 48.02 O \ ATOM 4834 N SER H 49 -49.349 35.971 40.799 1.00 35.41 N \ ATOM 4835 CA SER H 49 -48.463 36.718 39.927 1.00 35.51 C \ ATOM 4836 C SER H 49 -48.306 36.039 38.556 1.00 37.51 C \ ATOM 4837 O SER H 49 -48.106 36.707 37.544 1.00 40.44 O \ ATOM 4838 CB SER H 49 -47.097 36.959 40.584 1.00 33.83 C \ ATOM 4839 OG SER H 49 -46.387 35.738 40.834 1.00 36.55 O \ ATOM 4840 N TRP H 50 -48.387 34.713 38.503 1.00 37.95 N \ ATOM 4841 CA TRP H 50 -48.309 34.056 37.223 1.00 33.81 C \ ATOM 4842 C TRP H 50 -49.629 34.200 36.419 1.00 32.25 C \ ATOM 4843 O TRP H 50 -49.589 34.501 35.249 1.00 31.09 O \ ATOM 4844 CB TRP H 50 -47.894 32.565 37.406 1.00 34.66 C \ ATOM 4845 CG TRP H 50 -47.789 31.867 36.046 1.00 31.88 C \ ATOM 4846 CD1 TRP H 50 -46.717 31.870 35.199 1.00 32.09 C \ ATOM 4847 CD2 TRP H 50 -48.798 31.110 35.410 1.00 30.31 C \ ATOM 4848 NE1 TRP H 50 -47.009 31.169 34.060 1.00 31.55 N \ ATOM 4849 CE2 TRP H 50 -48.288 30.691 34.167 1.00 28.26 C \ ATOM 4850 CE3 TRP H 50 -50.116 30.768 35.754 1.00 33.14 C \ ATOM 4851 CZ2 TRP H 50 -49.025 29.916 33.281 1.00 29.67 C \ ATOM 4852 CZ3 TRP H 50 -50.865 29.978 34.859 1.00 33.41 C \ ATOM 4853 CH2 TRP H 50 -50.316 29.574 33.630 1.00 32.02 C \ ATOM 4854 N PHE H 51 -50.798 33.990 37.021 1.00 31.89 N \ ATOM 4855 CA PHE H 51 -52.053 34.199 36.264 1.00 34.69 C \ ATOM 4856 C PHE H 51 -52.238 35.613 35.692 1.00 37.98 C \ ATOM 4857 O PHE H 51 -52.701 35.742 34.583 1.00 40.07 O \ ATOM 4858 CB PHE H 51 -53.266 33.813 37.066 1.00 35.58 C \ ATOM 4859 CG PHE H 51 -53.486 32.339 37.144 1.00 35.18 C \ ATOM 4860 CD1 PHE H 51 -52.825 31.581 38.081 1.00 32.69 C \ ATOM 4861 CD2 PHE H 51 -54.405 31.729 36.326 1.00 37.04 C \ ATOM 4862 CE1 PHE H 51 -53.057 30.230 38.197 1.00 36.86 C \ ATOM 4863 CE2 PHE H 51 -54.647 30.385 36.433 1.00 35.67 C \ ATOM 4864 CZ PHE H 51 -53.967 29.625 37.356 1.00 35.02 C \ ATOM 4865 N ASP H 52 -51.811 36.657 36.398 1.00 42.46 N \ ATOM 4866 CA ASP H 52 -51.851 38.013 35.813 1.00 48.04 C \ ATOM 4867 C ASP H 52 -50.718 38.336 34.829 1.00 48.12 C \ ATOM 4868 O ASP H 52 -50.803 39.339 34.142 1.00 51.09 O \ ATOM 4869 CB ASP H 52 -51.778 39.142 36.854 1.00 49.23 C \ ATOM 4870 CG ASP H 52 -52.432 38.811 38.162 1.00 53.58 C \ ATOM 4871 OD1 ASP H 52 -53.669 38.526 38.184 1.00 49.29 O \ ATOM 4872 OD2 ASP H 52 -51.676 38.884 39.181 1.00 52.42 O \ ATOM 4873 N GLY H 53 -49.625 37.584 34.805 1.00 49.30 N \ ATOM 4874 CA GLY H 53 -48.479 37.965 33.951 1.00 50.52 C \ ATOM 4875 C GLY H 53 -48.691 37.841 32.439 1.00 50.07 C \ ATOM 4876 O GLY H 53 -49.813 37.681 31.967 1.00 51.61 O \ ATOM 4877 N GLU H 54 -47.593 37.930 31.684 1.00 54.70 N \ ATOM 4878 CA GLU H 54 -47.559 37.631 30.224 1.00 60.70 C \ ATOM 4879 C GLU H 54 -48.334 36.339 29.859 1.00 53.91 C \ ATOM 4880 O GLU H 54 -48.143 35.306 30.488 1.00 57.26 O \ ATOM 4881 CB GLU H 54 -46.089 37.507 29.749 1.00 68.10 C \ ATOM 4882 CG GLU H 54 -45.845 37.260 28.242 1.00 72.17 C \ ATOM 4883 CD GLU H 54 -45.743 38.526 27.370 1.00 69.71 C \ ATOM 4884 OE1 GLU H 54 -45.561 39.638 27.893 1.00 74.88 O \ ATOM 4885 OE2 GLU H 54 -45.818 38.411 26.128 1.00 73.06 O \ ATOM 4886 N GLY H 55 -49.227 36.420 28.871 1.00 46.97 N \ ATOM 4887 CA GLY H 55 -49.946 35.252 28.346 1.00 42.67 C \ ATOM 4888 C GLY H 55 -49.150 34.581 27.223 1.00 38.77 C \ ATOM 4889 O GLY H 55 -48.212 35.156 26.645 1.00 42.48 O \ ATOM 4890 N ALA H 56 -49.518 33.355 26.929 1.00 34.84 N \ ATOM 4891 CA ALA H 56 -48.970 32.632 25.792 1.00 37.29 C \ ATOM 4892 C ALA H 56 -49.494 33.230 24.474 1.00 39.19 C \ ATOM 4893 O ALA H 56 -50.557 33.840 24.446 1.00 41.68 O \ ATOM 4894 CB ALA H 56 -49.353 31.166 25.894 1.00 32.95 C \ ATOM 4895 N SER H 57 -48.747 33.050 23.395 1.00 34.88 N \ ATOM 4896 CA SER H 57 -49.201 33.463 22.082 1.00 40.27 C \ ATOM 4897 C SER H 57 -50.420 32.599 21.754 1.00 43.03 C \ ATOM 4898 O SER H 57 -50.543 31.475 22.241 1.00 44.90 O \ ATOM 4899 CB SER H 57 -48.106 33.263 21.034 1.00 37.13 C \ ATOM 4900 OG SER H 57 -47.945 31.892 20.763 1.00 38.60 O \ ATOM 4901 N THR H 58 -51.333 33.107 20.944 1.00 43.01 N \ ATOM 4902 CA THR H 58 -52.582 32.371 20.763 1.00 38.51 C \ ATOM 4903 C THR H 58 -52.415 30.994 20.049 1.00 34.54 C \ ATOM 4904 O THR H 58 -53.253 30.104 20.198 1.00 37.56 O \ ATOM 4905 CB THR H 58 -53.637 33.248 20.075 1.00 43.12 C \ ATOM 4906 OG1 THR H 58 -53.167 33.607 18.776 1.00 43.58 O \ ATOM 4907 CG2 THR H 58 -53.902 34.494 20.906 1.00 45.11 C \ ATOM 4908 N ASP H 59 -51.340 30.809 19.292 1.00 35.85 N \ ATOM 4909 CA ASP H 59 -51.108 29.552 18.588 1.00 38.68 C \ ATOM 4910 C ASP H 59 -50.503 28.454 19.482 1.00 39.97 C \ ATOM 4911 O ASP H 59 -50.454 27.295 19.075 1.00 38.11 O \ ATOM 4912 CB ASP H 59 -50.157 29.755 17.414 1.00 43.33 C \ ATOM 4913 CG ASP H 59 -48.741 30.155 17.861 1.00 45.18 C \ ATOM 4914 OD1 ASP H 59 -48.573 31.276 18.386 1.00 45.12 O \ ATOM 4915 OD2 ASP H 59 -47.800 29.365 17.640 1.00 46.44 O \ ATOM 4916 N PHE H 60 -50.014 28.814 20.671 1.00 37.97 N \ ATOM 4917 CA PHE H 60 -49.322 27.840 21.522 1.00 38.23 C \ ATOM 4918 C PHE H 60 -50.145 26.583 21.746 1.00 38.18 C \ ATOM 4919 O PHE H 60 -51.223 26.656 22.322 1.00 40.55 O \ ATOM 4920 CB PHE H 60 -48.985 28.437 22.862 1.00 38.76 C \ ATOM 4921 CG PHE H 60 -48.436 27.445 23.833 1.00 34.39 C \ ATOM 4922 CD1 PHE H 60 -47.089 27.070 23.781 1.00 36.36 C \ ATOM 4923 CD2 PHE H 60 -49.244 26.915 24.809 1.00 33.37 C \ ATOM 4924 CE1 PHE H 60 -46.571 26.183 24.722 1.00 33.22 C \ ATOM 4925 CE2 PHE H 60 -48.752 26.011 25.722 1.00 36.17 C \ ATOM 4926 CZ PHE H 60 -47.402 25.634 25.665 1.00 35.04 C \ ATOM 4927 N MET H 61 -49.641 25.458 21.240 1.00 35.24 N \ ATOM 4928 CA MET H 61 -50.270 24.142 21.439 1.00 37.83 C \ ATOM 4929 C MET H 61 -51.772 24.149 21.140 1.00 42.31 C \ ATOM 4930 O MET H 61 -52.591 23.637 21.915 1.00 35.37 O \ ATOM 4931 CB MET H 61 -49.973 23.615 22.861 1.00 36.02 C \ ATOM 4932 CG MET H 61 -48.458 23.421 23.062 1.00 39.48 C \ ATOM 4933 SD MET H 61 -47.908 22.499 24.528 1.00 38.05 S \ ATOM 4934 CE MET H 61 -47.898 20.831 23.881 1.00 43.53 C \ ATOM 4935 N SER H 62 -52.119 24.718 19.998 1.00 44.33 N \ ATOM 4936 CA SER H 62 -53.501 24.677 19.538 1.00 49.78 C \ ATOM 4937 C SER H 62 -53.943 23.232 19.329 1.00 54.84 C \ ATOM 4938 O SER H 62 -55.136 22.929 19.385 1.00 48.46 O \ ATOM 4939 CB SER H 62 -53.649 25.477 18.260 1.00 50.66 C \ ATOM 4940 OG SER H 62 -52.815 24.920 17.264 1.00 59.97 O \ ATOM 4941 N THR H 63 -52.977 22.348 19.067 1.00 58.82 N \ ATOM 4942 CA THR H 63 -53.190 20.893 19.175 1.00 62.64 C \ ATOM 4943 C THR H 63 -52.035 20.217 19.908 1.00 60.43 C \ ATOM 4944 O THR H 63 -50.862 20.585 19.759 1.00 56.66 O \ ATOM 4945 CB THR H 63 -53.399 20.242 17.795 1.00 67.62 C \ ATOM 4946 OG1 THR H 63 -54.747 20.501 17.391 1.00 74.49 O \ ATOM 4947 CG2 THR H 63 -53.170 18.695 17.815 1.00 68.58 C \ ATOM 4948 N ARG H 64 -52.376 19.202 20.687 1.00 58.75 N \ ATOM 4949 CA ARG H 64 -51.383 18.531 21.522 1.00 55.75 C \ ATOM 4950 C ARG H 64 -50.239 17.830 20.758 1.00 57.66 C \ ATOM 4951 O ARG H 64 -49.038 18.122 20.973 1.00 56.53 O \ ATOM 4952 CB ARG H 64 -52.086 17.547 22.439 1.00 53.75 C \ ATOM 4953 CG ARG H 64 -51.130 16.942 23.428 1.00 48.57 C \ ATOM 4954 CD ARG H 64 -51.831 16.124 24.469 1.00 43.50 C \ ATOM 4955 NE ARG H 64 -50.830 15.450 25.265 1.00 36.11 N \ ATOM 4956 CZ ARG H 64 -51.101 14.508 26.141 1.00 38.03 C \ ATOM 4957 NH1 ARG H 64 -52.371 14.143 26.355 1.00 36.60 N \ ATOM 4958 NH2 ARG H 64 -50.116 13.956 26.845 1.00 30.62 N \ ATOM 4959 N GLU H 65 -50.620 16.913 19.877 1.00 56.08 N \ ATOM 4960 CA GLU H 65 -49.680 16.145 19.056 1.00 56.55 C \ ATOM 4961 C GLU H 65 -49.027 15.041 19.866 1.00 55.73 C \ ATOM 4962 O GLU H 65 -47.807 15.056 20.127 1.00 57.25 O \ ATOM 4963 CB GLU H 65 -48.636 17.038 18.376 1.00 60.23 C \ ATOM 4964 CG GLU H 65 -49.263 18.180 17.592 1.00 64.55 C \ ATOM 4965 CD GLU H 65 -48.257 18.968 16.797 1.00 68.71 C \ ATOM 4966 OE1 GLU H 65 -47.185 18.421 16.452 1.00 75.48 O \ ATOM 4967 OE2 GLU H 65 -48.546 20.143 16.519 1.00 78.96 O \ ATOM 4968 N GLN H 66 -49.867 14.094 20.272 1.00 52.26 N \ ATOM 4969 CA GLN H 66 -49.424 12.876 20.943 1.00 53.07 C \ ATOM 4970 C GLN H 66 -49.649 11.719 19.982 1.00 58.44 C \ ATOM 4971 O GLN H 66 -50.783 11.497 19.564 1.00 65.55 O \ ATOM 4972 CB GLN H 66 -50.187 12.650 22.270 1.00 47.38 C \ ATOM 4973 CG GLN H 66 -50.032 11.242 22.837 1.00 42.55 C \ ATOM 4974 CD GLN H 66 -50.817 10.945 24.103 1.00 36.27 C \ ATOM 4975 OE1 GLN H 66 -50.338 10.226 24.970 1.00 33.88 O \ ATOM 4976 NE2 GLN H 66 -52.036 11.425 24.185 1.00 39.49 N \ ATOM 4977 N PRO H 67 -48.573 10.999 19.601 1.00 60.84 N \ ATOM 4978 CA PRO H 67 -48.771 9.769 18.842 1.00 63.71 C \ ATOM 4979 C PRO H 67 -49.491 8.722 19.670 1.00 61.03 C \ ATOM 4980 O PRO H 67 -49.675 7.603 19.205 1.00 71.93 O \ ATOM 4981 CB PRO H 67 -47.343 9.310 18.533 1.00 65.39 C \ ATOM 4982 CG PRO H 67 -46.537 10.564 18.559 1.00 63.88 C \ ATOM 4983 CD PRO H 67 -47.156 11.397 19.642 1.00 59.49 C \ TER 4984 PRO H 67 \ HETATM 5184 O HOH H 101 -54.870 23.019 22.599 1.00 43.68 O \ HETATM 5185 O HOH H 102 -47.802 26.872 17.789 1.00 47.05 O \ HETATM 5186 O HOH H 103 -51.623 13.719 18.472 1.00 68.53 O \ HETATM 5187 O HOH H 104 -48.029 39.243 37.740 1.00 42.60 O \ HETATM 5188 O HOH H 105 -49.230 30.928 45.107 1.00 37.32 O \ HETATM 5189 O HOH H 106 -51.527 33.147 44.232 1.00 42.63 O \ HETATM 5190 O HOH H 107 -44.970 36.100 44.527 1.00 42.72 O \ HETATM 5191 O HOH H 108 -42.764 23.067 49.374 1.00 38.86 O \ HETATM 5192 O HOH H 109 -48.699 33.991 17.505 1.00 47.15 O \ HETATM 5193 O HOH H 110 -40.754 30.121 50.605 1.00 39.95 O \ HETATM 5194 O HOH H 111 -42.759 30.444 54.072 1.00 43.83 O \ CONECT 60 4985 \ CONECT 776 4985 \ CONECT 1285 4986 \ CONECT 2001 4986 \ CONECT 2552 4987 \ CONECT 3777 4988 \ CONECT 4493 4988 \ CONECT 4985 60 776 \ CONECT 4986 1285 2001 \ CONECT 4987 2552 5129 \ CONECT 4988 3777 4493 \ CONECT 5129 4987 \ MASTER 370 0 4 32 20 0 8 6 5186 8 12 54 \ END \ """, "6ifcchainH") cmd.hide("all") cmd.color('grey70', "6ifcchainH") cmd.show('cartoon', "6ifcchainH") cmd.center("6ifcchainH", state=0, origin=1) cmd.zoom("6ifcchainH", animate=-1) cmd.select("e6ifcH1", "c. H & i. 40-67") cmd.color("red", "e6ifcH1") cmd.disable("e6ifcH1")