cmd.read_pdbstr("""\ HEADER RIBOSOME 02-JAN-03 1NJP \ TITLE THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM \ TITLE 2 DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC \ TITLE 3 (ASM) \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: 23S RIBOSOMAL RNA; \ COMPND 3 CHAIN: 0; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: TRNA ACCEPTOR STEM MIMIC; \ COMPND 6 CHAIN: 5; \ COMPND 7 ENGINEERED: YES; \ COMPND 8 MOL_ID: 3; \ COMPND 9 MOLECULE: 50S RIBOSOMAL PROTEIN L16; \ COMPND 10 CHAIN: K; \ COMPND 11 MOL_ID: 4; \ COMPND 12 MOLECULE: GENERAL STRESS PROTEIN CTC; \ COMPND 13 CHAIN: T \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 3 ORGANISM_TAXID: 1299; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 SYNTHETIC: YES; \ SOURCE 6 OTHER_DETAILS: THE TERMINAL C OF ASM WAS COUPLED VIA A \ SOURCE 7 PHOSPHODIESTER BOND TO THE 5 OH OF THE N6-DIMETHYL MOIETY OF \ SOURCE 8 PUROMYCIN; \ SOURCE 9 MOL_ID: 3; \ SOURCE 10 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 11 ORGANISM_TAXID: 1299; \ SOURCE 12 MOL_ID: 4; \ SOURCE 13 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 14 ORGANISM_TAXID: 1299 \ KEYWDS RIBOSOMES, TRNA, PUROMYCIN, SPARSOMYCIN, PEPTIDYL-TRANSFERASE, \ KEYWDS 2 PEPTIDE BOND FORMATION, RIBOSOME \ EXPDTA X-RAY DIFFRACTION \ MDLTYP CA ATOMS ONLY, CHAIN K, T \ AUTHOR A.BASHAN,I.AGMON,R.ZARIVATCH,F.SCHLUENZEN,J.M.HARMS,R.BERISIO, \ AUTHOR 2 H.BARTELS,H.A.HANSEN,A.YONATH \ REVDAT 3 16-AUG-23 1NJP 1 LINK \ REVDAT 2 24-FEB-09 1NJP 1 VERSN \ REVDAT 1 11-FEB-03 1NJP 0 \ JRNL AUTH A.BASHAN,I.AGMON,R.ZARIVATCH,F.SCHLUENZEN,J.M.HARMS, \ JRNL AUTH 2 R.BERISIO,H.BARTELS,F.FRANCESCHI,T.AUERBACH,H.A.HANSEN, \ JRNL AUTH 3 E.KOSSOY,M.KESSLER,A.YONATH \ JRNL TITL STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND \ JRNL TITL 2 FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION \ JRNL REF MOL.CELL V. 11 91 2003 \ JRNL REFN ISSN 1097-2765 \ JRNL PMID 12535524 \ JRNL DOI 10.1016/S1097-2765(03)00009-1 \ REMARK 2 \ REMARK 2 RESOLUTION. 3.50 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : CNS \ REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- \ REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, \ REMARK 3 : READ,RICE,SIMONSON,WARREN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : ENGH & HUBER \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL \ REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL \ REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL \ REMARK 3 NUMBER OF REFLECTIONS : 266007 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING SET) : 0.244 \ REMARK 3 FREE R VALUE : 0.295 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 13300 \ REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : NULL \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL \ REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL \ REMARK 3 BIN R VALUE (WORKING SET) : NULL \ REMARK 3 BIN FREE R VALUE : NULL \ REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL \ REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 347 \ REMARK 3 NUCLEIC ACID ATOMS : 59902 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 0 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : NULL \ REMARK 3 B22 (A**2) : NULL \ REMARK 3 B33 (A**2) : NULL \ REMARK 3 B12 (A**2) : NULL \ REMARK 3 B13 (A**2) : NULL \ REMARK 3 B23 (A**2) : NULL \ REMARK 3 \ REMARK 3 ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM SIGMAA (A) : NULL \ REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL \ REMARK 3 \ REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM C-V SIGMAA (A) : NULL \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 BOND LENGTHS (A) : 0.005 \ REMARK 3 BOND ANGLES (DEGREES) : 0.970 \ REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL \ REMARK 3 IMPROPER ANGLES (DEGREES) : NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL MODEL : NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA \ REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 KSOL : NULL \ REMARK 3 BSOL : NULL \ REMARK 3 \ REMARK 3 NCS MODEL : NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT \ REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL \ REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 PARAMETER FILE 1 : NULL \ REMARK 3 TOPOLOGY FILE 1 : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: NULL \ REMARK 4 \ REMARK 4 1NJP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-03. \ REMARK 100 THE DEPOSITION ID IS D_1000017928. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 01-JUL-01 \ REMARK 200 TEMPERATURE (KELVIN) : 90 \ REMARK 200 PH : 7.80 \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : APS \ REMARK 200 BEAMLINE : 19-ID \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CCD \ REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO \ REMARK 200 DATA SCALING SOFTWARE : SCALEPACK \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 290998 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 \ REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 \ REMARK 200 DATA REDUNDANCY : NULL \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : 0.12500 \ REMARK 200 FOR THE DATA SET : 4.6000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 \ REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : 0.38400 \ REMARK 200 FOR SHELL : 2.100 \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: CCP4 \ REMARK 200 STARTING MODEL: PDB ENTRY 1NKW \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 64.00 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: ETHANOL, DIMETHYLHEXANEDIOL, MGCL2, \ REMARK 280 KCL, HEPES, NH4CL, SPARSOMYCIN; SOAKING CRYSTALS IN: 0.025MM ASM \ REMARK 280 , PH 7.80 \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,-Y,Z \ REMARK 290 3555 -X,Y,-Z \ REMARK 290 4555 X,-Y,-Z \ REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 \ REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 \ REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 \ REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 84.95000 \ REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 204.95000 \ REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 347.95000 \ REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 84.95000 \ REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 204.95000 \ REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 347.95000 \ REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 84.95000 \ REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 204.95000 \ REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 347.95000 \ REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 84.95000 \ REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 204.95000 \ REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 347.95000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: 0, 5, K, T \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 A 0 249 \ REMARK 465 C 0 250 \ REMARK 465 C 0 251 \ REMARK 465 G 0 252 \ REMARK 465 A 0 253 \ REMARK 465 A 0 254 \ REMARK 465 A 0 255 \ REMARK 465 C 0 256 \ REMARK 465 G 0 257 \ REMARK 465 C 0 258 \ REMARK 465 U 0 259 \ REMARK 465 U 0 260 \ REMARK 465 G 0 261 \ REMARK 465 C 0 262 \ REMARK 465 G 0 263 \ REMARK 465 U 0 264 \ REMARK 465 U 0 265 \ REMARK 465 U 0 266 \ REMARK 465 C 0 267 \ REMARK 465 G 0 268 \ REMARK 465 G 0 269 \ REMARK 465 G 0 270 \ REMARK 465 G 0 271 \ REMARK 465 U 0 272 \ REMARK 465 U 0 273 \ REMARK 465 G 0 274 \ REMARK 465 U 0 275 \ REMARK 465 A 0 276 \ REMARK 465 G 0 277 \ REMARK 465 G 0 278 \ REMARK 465 A 0 279 \ REMARK 465 C 0 280 \ REMARK 465 C 0 281 \ REMARK 465 A 0 282 \ REMARK 465 G 0 283 \ REMARK 465 U 0 284 \ REMARK 465 U 0 285 \ REMARK 465 U 0 286 \ REMARK 465 U 0 287 \ REMARK 465 U 0 288 \ REMARK 465 A 0 289 \ REMARK 465 A 0 290 \ REMARK 465 G 0 291 \ REMARK 465 C 0 374 \ REMARK 465 U 0 375 \ REMARK 465 G 0 376 \ REMARK 465 G 0 377 \ REMARK 465 C 0 378 \ REMARK 465 A 0 379 \ REMARK 465 C 0 380 \ REMARK 465 C 0 381 \ REMARK 465 U 0 382 \ REMARK 465 G 0 383 \ REMARK 465 A 0 384 \ REMARK 465 G 0 385 \ REMARK 465 U 0 386 \ REMARK 465 G 0 892 \ REMARK 465 G 0 893 \ REMARK 465 G 0 894 \ REMARK 465 G 0 895 \ REMARK 465 G 0 896 \ REMARK 465 C 0 897 \ REMARK 465 C 0 898 \ REMARK 465 U 0 899 \ REMARK 465 A 0 900 \ REMARK 465 C 0 901 \ REMARK 465 C 0 902 \ REMARK 465 A 0 903 \ REMARK 465 G 0 904 \ REMARK 465 C 0 905 \ REMARK 465 U 0 906 \ REMARK 465 U 0 907 \ REMARK 465 A 0 908 \ REMARK 465 C 0 909 \ REMARK 465 C 0 910 \ REMARK 465 G 0 2098 \ REMARK 465 G 0 2099 \ REMARK 465 A 0 2100 \ REMARK 465 U 0 2101 \ REMARK 465 A 0 2102 \ REMARK 465 C 0 2111 \ REMARK 465 C 0 2112 \ REMARK 465 U 0 2113 \ REMARK 465 G 0 2114 \ REMARK 465 C 0 2115 \ REMARK 465 G 0 2116 \ REMARK 465 U 0 2126 \ REMARK 465 U 0 2127 \ REMARK 465 U 0 2128 \ REMARK 465 U 0 2129 \ REMARK 465 G 0 2130 \ REMARK 465 G 0 2131 \ REMARK 465 A 0 2141 \ REMARK 465 G 0 2142 \ REMARK 465 G 0 2143 \ REMARK 465 C 0 2144 \ REMARK 465 A 0 2145 \ REMARK 465 A 0 2146 \ REMARK 465 C 0 2147 \ REMARK 465 G 0 2148 \ REMARK 465 G 0 2149 \ REMARK 465 U 0 2150 \ REMARK 465 G 0 2151 \ REMARK 465 A 0 2152 \ REMARK 465 A 0 2153 \ REMARK 465 A 0 2154 \ REMARK 465 U 0 2155 \ REMARK 465 A 0 2156 \ REMARK 465 U 0 2775 \ REMARK 465 U 0 2776 \ REMARK 465 A 0 2777 \ REMARK 465 C 0 2878 \ REMARK 465 U 0 2879 \ REMARK 465 C 0 2880 \ REMARK 465 G 5 11 \ REMARK 465 G 5 12 \ REMARK 465 U 5 13 \ REMARK 465 U 5 14 \ REMARK 465 C 5 15 \ REMARK 465 G 5 16 \ REMARK 465 A 5 17 \ REMARK 465 U 5 18 \ REMARK 465 C 5 19 \ REMARK 465 C 5 20 \ REMARK 465 MET K 2 \ REMARK 465 LEU K 3 \ REMARK 465 LEU K 4 \ REMARK 465 PRO K 5 \ REMARK 465 LYS K 6 \ REMARK 465 ARG K 7 \ REMARK 465 MET K 132 \ REMARK 465 VAL K 133 \ REMARK 465 LYS K 134 \ REMARK 465 ARG K 135 \ REMARK 465 GLU K 136 \ REMARK 465 VAL K 137 \ REMARK 465 TYR K 138 \ REMARK 465 ASP K 139 \ REMARK 465 GLU K 140 \ REMARK 465 ALA K 141 \ REMARK 465 GLN K 142 \ REMARK 465 ASP T 224 \ REMARK 465 ASN T 225 \ REMARK 465 ALA T 226 \ REMARK 465 GLY T 227 \ REMARK 465 THR T 228 \ REMARK 465 ASP T 229 \ REMARK 465 SER T 230 \ REMARK 465 GLU T 231 \ REMARK 465 ASP T 232 \ REMARK 465 ASN T 233 \ REMARK 465 SER T 234 \ REMARK 465 ASP T 235 \ REMARK 465 ALA T 236 \ REMARK 465 GLN T 237 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: PLANAR GROUPS \ REMARK 500 \ REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL \ REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE \ REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN \ REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS \ REMARK 500 AN RMSD GREATER THAN THIS VALUE \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 M RES CSSEQI RMS TYPE \ REMARK 500 U 0 873 0.09 SIDE CHAIN \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1NJM RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH ASM/SPARSOMYCIN \ REMARK 900 RELATED ID: 1NJN RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH SPARSOMYCIN \ REMARK 900 RELATED ID: 1NJO RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH ACCP \ REMARK 900 RELATED ID: 1K01 RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH CHLORAMPHENICOL \ REMARK 900 RELATED ID: 1JZX RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH CLINDAMYCIN \ REMARK 900 RELATED ID: 1JZY RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH ERYTHROMYCIN \ REMARK 900 RELATED ID: 1JZZ RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH ROXITHROMYCIN \ REMARK 900 RELATED ID: 1K00 RELATED DB: PDB \ REMARK 900 COMPLEX OF DEINOCOCCUS RADIODURANS 50S WITH CLARITHROMYCIN \ REMARK 900 RELATED ID: 1NKW RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS \ REMARK 900 RADIODURANS \ DBREF 1NJP 0 1 2880 GB 6460405 AE002087 4635 1756 \ DBREF 1NJP K 2 142 UNP Q9RXJ5 RL16_DEIRA 2 142 \ DBREF 1NJP T 1 237 UNP Q9RX88 RL25_DEIRA 17 253 \ DBREF 1NJP 5 1 35 PDB 1NJP 1NJP 1 35 \ SEQRES 1 0 2880 G G U C A A G A U A G U A \ SEQRES 2 0 2880 A G G G U C C A C G G U G \ SEQRES 3 0 2880 G A U G C C C U G G C G C \ SEQRES 4 0 2880 U G G A G C C G A U G A A \ SEQRES 5 0 2880 G G A C G C G A U U A C C \ SEQRES 6 0 2880 U G C G A A A A G C C C C \ SEQRES 7 0 2880 G A C G A G C U G G A G A \ SEQRES 8 0 2880 U A C G C U U U G A C U C \ SEQRES 9 0 2880 G G G G A U G U C C G A A \ SEQRES 10 0 2880 U G G G G A A A C C C A C \ SEQRES 11 0 2880 C U C G U A A G A G G U A \ SEQRES 12 0 2880 U C C G C A A G G A U G G \ SEQRES 13 0 2880 G A A C U C A G G G A A C \ SEQRES 14 0 2880 U G A A A C A U C U C A G \ SEQRES 15 0 2880 U A C C U G A A G G A G A \ SEQRES 16 0 2880 A G A A A G A G A A U U C \ SEQRES 17 0 2880 G A U U C C G U U A G U A \ SEQRES 18 0 2880 G C G G C G A G C G A A C \ SEQRES 19 0 2880 C C G G A U C A G C C C A \ SEQRES 20 0 2880 A A C C G A A A C G C U U \ SEQRES 21 0 2880 G C G U U U C G G G G U U \ SEQRES 22 0 2880 G U A G G A C C A G U U U \ SEQRES 23 0 2880 U U A A G A U U C A A C C \ SEQRES 24 0 2880 C C U C A A G C C G A A G \ SEQRES 25 0 2880 U G G C U G G A A A G C U \ SEQRES 26 0 2880 A C A C C U C A G A A G G \ SEQRES 27 0 2880 U G A G A G U C C U G U A \ SEQRES 28 0 2880 G G C G A A C G A G C G G \ SEQRES 29 0 2880 U U G A C U G U A C U G G \ SEQRES 30 0 2880 C A C C U G A G U A G G U \ SEQRES 31 0 2880 C G U U G U U C G U G A A \ SEQRES 32 0 2880 A C G A U G A C U G A A U \ SEQRES 33 0 2880 C C G C G C G G A C C A C \ SEQRES 34 0 2880 C G C G C A A G G C U A A \ SEQRES 35 0 2880 A U A C U C C C A G U G A \ SEQRES 36 0 2880 C C G A U A G C G C A U A \ SEQRES 37 0 2880 G U A C C G U G A G G G A \ SEQRES 38 0 2880 A A G G U G A A A A G A A \ SEQRES 39 0 2880 C C C C G G G A G G G G A \ SEQRES 40 0 2880 G U G A A A G A G A A C C \ SEQRES 41 0 2880 U G A A A C C G U G G A C \ SEQRES 42 0 2880 U U A C A A G C A G U C A \ SEQRES 43 0 2880 U G G C A C C U U A U G C \ SEQRES 44 0 2880 G U G U U A U G G C G U G \ SEQRES 45 0 2880 C C U A U U G A A G C A U \ SEQRES 46 0 2880 G A G C C G G C G A C U U \ SEQRES 47 0 2880 A G A C C U G A C G U G C \ SEQRES 48 0 2880 G A G C U U A A G U U G A \ SEQRES 49 0 2880 A A A A C G G A G G C G G \ SEQRES 50 0 2880 A G C G A A A G C G A G U \ SEQRES 51 0 2880 C C G A A U A G G G C G G \ SEQRES 52 0 2880 C A U U A G U A C G U C G \ SEQRES 53 0 2880 G G C U A G A C U C G A A \ SEQRES 54 0 2880 A C C A G G U G A G C U A \ SEQRES 55 0 2880 A G C A U G A C C A G G U \ SEQRES 56 0 2880 U G A A A C C C C C G U G \ SEQRES 57 0 2880 A C A G G G G G C G G A G \ SEQRES 58 0 2880 G A C C G A A C C G G U G \ SEQRES 59 0 2880 C C U G C U G A A A C A G \ SEQRES 60 0 2880 U C U C G G A U G A G U U \ SEQRES 61 0 2880 G U G U U U A G G A G U G \ SEQRES 62 0 2880 A A A A G C U A A C C G A \ SEQRES 63 0 2880 A C C U G G A G A U A G C \ SEQRES 64 0 2880 U A G U U C U C C C C G A \ SEQRES 65 0 2880 A A U G U A U U G A G G U \ SEQRES 66 0 2880 A C A G C C U C G G A U G \ SEQRES 67 0 2880 U U G A C C A U G U C C U \ SEQRES 68 0 2880 G U A G A G C A C U C A C \ SEQRES 69 0 2880 A A G G C U A G G G G G C \ SEQRES 70 0 2880 C U A C C A G C U U A C C \ SEQRES 71 0 2880 A A A C C U U A U G A A A \ SEQRES 72 0 2880 C U C C G A A G G G G C A \ SEQRES 73 0 2880 C G C G U U U A G U C C G \ SEQRES 74 0 2880 G G A G U G A G G C U G C \ SEQRES 75 0 2880 G A G A G C U A A C U U C \ SEQRES 76 0 2880 C G U A G C C G A G A G G \ SEQRES 77 0 2880 G A A A C A A C C C A G A \ SEQRES 78 0 2880 C C A U C A G C U A A G G \ SEQRES 79 0 2880 U C C C U A A A U G A U C \ SEQRES 80 0 2880 G C U C A G U G G U U A A \ SEQRES 81 0 2880 G G A U G U G U C G U C G \ SEQRES 82 0 2880 C A U A G A C A G C C A G \ SEQRES 83 0 2880 G A G G U U G G C U U A G \ SEQRES 84 0 2880 A A G C A G C C A C C C U \ SEQRES 85 0 2880 U C A A A G A G U G C G U \ SEQRES 86 0 2880 A A U A G C U C A C U G G \ SEQRES 87 0 2880 U C G A G U G A C G A U G \ SEQRES 88 0 2880 C G C C G A A A A U G A U \ SEQRES 89 0 2880 C G G G G C U C A A G U G \ SEQRES 90 0 2880 A U C U A C C G A A G C U \ SEQRES 91 0 2880 A U G G A U U C A A C U C \ SEQRES 92 0 2880 G C G A A G C G A G U U G \ SEQRES 93 0 2880 U C U G G U A G G G G A G \ SEQRES 94 0 2880 C G U U C A G U C C G C G \ SEQRES 95 0 2880 G A G A A G C C A U A C C \ SEQRES 96 0 2880 G G A A G G A G U G G U G \ SEQRES 97 0 2880 G A G C C G A C U G A A G \ SEQRES 98 0 2880 U G C G G A U G C C G G C \ SEQRES 99 0 2880 A U G A G U A A C G A U A \ SEQRES 100 0 2880 A A A G A A G U G A G A A \ SEQRES 101 0 2880 U C U U C U U C G C C G U \ SEQRES 102 0 2880 A A G G A C A A G G G U U \ SEQRES 103 0 2880 C C U G G G G A A G G G U \ SEQRES 104 0 2880 C G U C C G C C C A G G G \ SEQRES 105 0 2880 A A A G U C G G G A C C U \ SEQRES 106 0 2880 A A G G U G A G G C C G A \ SEQRES 107 0 2880 A C G G C G C A G C C G A \ SEQRES 108 0 2880 U G G A C A G C A G G U C \ SEQRES 109 0 2880 A A G A U U C C U G C A C \ SEQRES 110 0 2880 C G A U C A U G U G G A G \ SEQRES 111 0 2880 U G A U G G A G G G A C G \ SEQRES 112 0 2880 C A U U A C G C U A U C C \ SEQRES 113 0 2880 A A U G C C A A G C U A U \ SEQRES 114 0 2880 G G C U A U G C U G G U U \ SEQRES 115 0 2880 G G U A C G C U C A A G G \ SEQRES 116 0 2880 G C G A U C G G G U C A G \ SEQRES 117 0 2880 A A A A U C U A C C G G U \ SEQRES 118 0 2880 C A C A U G C C U C A G A \ SEQRES 119 0 2880 C G U A U C G G G A G C U \ SEQRES 120 0 2880 U C C U C G G A A G C G A \ SEQRES 121 0 2880 A G U U G G A A A C G C G \ SEQRES 122 0 2880 A C G G U G C C A A G A A \ SEQRES 123 0 2880 A A G C U U C U A A A C G \ SEQRES 124 0 2880 U U G A A A C A U G A U U \ SEQRES 125 0 2880 G C C C G U A C C G C A A \ SEQRES 126 0 2880 A C C G A C A C A G G U G \ SEQRES 127 0 2880 U C C G A G U G U C A A U \ SEQRES 128 0 2880 G C A C U A A G G C G C G \ SEQRES 129 0 2880 C G A G A G A A C C C U C \ SEQRES 130 0 2880 G U U A A G G A A C U U U \ SEQRES 131 0 2880 G C A A U C U C A C C C C \ SEQRES 132 0 2880 G U A A C U U C G G A A G \ SEQRES 133 0 2880 A A G G G G U C C C C A C \ SEQRES 134 0 2880 G C U U C G C G U G G G G \ SEQRES 135 0 2880 C G C A G U G A A U A G G \ SEQRES 136 0 2880 C C C A G G C G A C U G U \ SEQRES 137 0 2880 U U A C C A A A A U C A C \ SEQRES 138 0 2880 A G C A C U C U G C C A A \ SEQRES 139 0 2880 C A C G A A C A G U G G A \ SEQRES 140 0 2880 C G U A U A G G G U G U G \ SEQRES 141 0 2880 A C G C C U G C C C G G U \ SEQRES 142 0 2880 G C C G G A A G G U C A A \ SEQRES 143 0 2880 G U G G A G C G G U G C A \ SEQRES 144 0 2880 A G C U G C G A A A U G A \ SEQRES 145 0 2880 A G C C C C G G U G A A C \ SEQRES 146 0 2880 G G C G G C C G U A A C U \ SEQRES 147 0 2880 A U A A C G G U C C U A A \ SEQRES 148 0 2880 G G U A G C G A A A U U C \ SEQRES 149 0 2880 C U U G U C G G G U A A G \ SEQRES 150 0 2880 U U C C G A C C U G C A C \ SEQRES 151 0 2880 G A A A G G C G U A A C G \ SEQRES 152 0 2880 A U C U G G G C G C U G U \ SEQRES 153 0 2880 C U C A A C G A G G G A C \ SEQRES 154 0 2880 U C G G U G A A A U U G A \ SEQRES 155 0 2880 A U U G G C U G U A A A G \ SEQRES 156 0 2880 A U G C G G C C U A C C C \ SEQRES 157 0 2880 G U A G C A G G A C G A A \ SEQRES 158 0 2880 A A G A C C C C G U G G A \ SEQRES 159 0 2880 G C U U U A C U A U A G U \ SEQRES 160 0 2880 C U G G C A U U G G G A U \ SEQRES 161 0 2880 U C G G G U U U C U C U G \ SEQRES 162 0 2880 C G U A G G A U A G G U G \ SEQRES 163 0 2880 G G A G C C U G C G A A A \ SEQRES 164 0 2880 C U G G C C U U U U G G G \ SEQRES 165 0 2880 G U C G G U G G A G G C A \ SEQRES 166 0 2880 A C G G U G A A A U A C C \ SEQRES 167 0 2880 A C C C U G A G A A A C U \ SEQRES 168 0 2880 U G G A U U U C U A A C C \ SEQRES 169 0 2880 U G A A A A A U C A C U U \ SEQRES 170 0 2880 U C G G G G A C C G U G C \ SEQRES 171 0 2880 U U G G C G G G U A G U U \ SEQRES 172 0 2880 U G A C U G G G G C G G U \ SEQRES 173 0 2880 C G C C U C C C A A A A U \ SEQRES 174 0 2880 G U A A C G G A G G C G C \ SEQRES 175 0 2880 C C A A A G G U C A C C U \ SEQRES 176 0 2880 C A A G A C G G U U G G A \ SEQRES 177 0 2880 A A U C G U C U G U A G A \ SEQRES 178 0 2880 G C G C A A A G G U A G A \ SEQRES 179 0 2880 A G G U G G C U U G A C U \ SEQRES 180 0 2880 G C G A G A C U G A C A C \ SEQRES 181 0 2880 G U C G A G C A G G G A G \ SEQRES 182 0 2880 G A A A C U C G G G C U U \ SEQRES 183 0 2880 A G U G A A C C G G U G G \ SEQRES 184 0 2880 U A C C G U G U G G A A G \ SEQRES 185 0 2880 G G C C A U C G A U C A A \ SEQRES 186 0 2880 C G G A U A A A A G U U A \ SEQRES 187 0 2880 C C C C G G G G A U A A C \ SEQRES 188 0 2880 A G G C U G A U C U C C C \ SEQRES 189 0 2880 C C G A G A G U C C A U A \ SEQRES 190 0 2880 U C G G C G G G G A G G U \ SEQRES 191 0 2880 U U G G C A C C U C G A U \ SEQRES 192 0 2880 G U C G G C U C G U C G C \ SEQRES 193 0 2880 A U C C U G G G G C U G A \ SEQRES 194 0 2880 A G A A G G U C C C A A G \ SEQRES 195 0 2880 G G U U G G G C U G U U C \ SEQRES 196 0 2880 G C C C A U U A A A G C G \ SEQRES 197 0 2880 G C A C G C G A G C U G G \ SEQRES 198 0 2880 G U U C A G A A C G U C G \ SEQRES 199 0 2880 U G A G A C A G U U C G G \ SEQRES 200 0 2880 U C U C U A U C C G C U A \ SEQRES 201 0 2880 C G G G C G C A G G A G A \ SEQRES 202 0 2880 A U U G A G G G G A G U U \ SEQRES 203 0 2880 G C U C C U A G U A C G A \ SEQRES 204 0 2880 G A G G A C C G G A G U G \ SEQRES 205 0 2880 A A C G G A C C G C U G G \ SEQRES 206 0 2880 U C U C C C U G C U G U C \ SEQRES 207 0 2880 G U A C C A A C G G C A C \ SEQRES 208 0 2880 A U G C A G G G U A G C U \ SEQRES 209 0 2880 A U G U C C G G A A C G G \ SEQRES 210 0 2880 A U A A C C G C U G A A A \ SEQRES 211 0 2880 G C A U C U A A G C G G G \ SEQRES 212 0 2880 A A G C C A G C C C C A A \ SEQRES 213 0 2880 G A U G A G U U C U C C C \ SEQRES 214 0 2880 A C U G U U U A U C A G G \ SEQRES 215 0 2880 U A A G A C U C C C G G A \ SEQRES 216 0 2880 A G A C C A C C G G G U U \ SEQRES 217 0 2880 A A G A G G C C A G G C G \ SEQRES 218 0 2880 U G C A C G C A U A G C A \ SEQRES 219 0 2880 A U G U G U U C A G C G G \ SEQRES 220 0 2880 A C U G G U G C U C A U C \ SEQRES 221 0 2880 A G U C G A G G U C U U G \ SEQRES 222 0 2880 A C C A C U C \ SEQRES 1 5 35 G G G G C U A A G C G G U \ SEQRES 2 5 35 U C G A U C C C G C U U A \ SEQRES 3 5 35 G C U C C A C C PPU \ SEQRES 1 K 141 MET LEU LEU PRO LYS ARG THR LYS PHE ARG LYS GLN PHE \ SEQRES 2 K 141 ARG GLY ARG MET THR GLY ASP ALA LYS GLY GLY ASP TYR \ SEQRES 3 K 141 VAL ALA PHE GLY ASP TYR GLY LEU ILE ALA MET GLU PRO \ SEQRES 4 K 141 ALA TRP ILE LYS SER ASN GLN ILE GLU ALA CYS ARG ILE \ SEQRES 5 K 141 VAL MET SER ARG HIS PHE ARG ARG GLY GLY LYS ILE TYR \ SEQRES 6 K 141 ILE ARG ILE PHE PRO ASP LYS PRO VAL THR LYS LYS PRO \ SEQRES 7 K 141 ALA GLU THR ARG MET GLY LYS GLY LYS GLY ALA VAL GLU \ SEQRES 8 K 141 TYR TRP VAL SER VAL VAL LYS PRO GLY ARG VAL MET PHE \ SEQRES 9 K 141 GLU VAL ALA GLY VAL THR GLU GLU GLN ALA LYS GLU ALA \ SEQRES 10 K 141 PHE ARG LEU ALA GLY HIS LYS LEU PRO ILE GLN THR LYS \ SEQRES 11 K 141 MET VAL LYS ARG GLU VAL TYR ASP GLU ALA GLN \ SEQRES 1 T 237 MET GLU LEU THR ALA LYS PRO ARG THR PRO LYS GLN LYS \ SEQRES 2 T 237 LEU ASP GLU SER MET ILE ALA ALA VAL ALA TYR ASN LYS \ SEQRES 3 T 237 GLU ASN ASN VAL SER PHE ALA LEU ASP ARG LYS ALA PHE \ SEQRES 4 T 237 ASP ARG ALA PHE ARG GLN GLN SER THR THR GLY LEU PHE \ SEQRES 5 T 237 ASP ILE THR VAL GLU GLY GLY GLU THR PHE PRO ALA LEU \ SEQRES 6 T 237 VAL LYS ALA VAL GLN MET ASP LYS ARG LYS ARG ALA PRO \ SEQRES 7 T 237 ILE HIS VAL ASP PHE TYR MET VAL THR TYR GLY GLU PRO \ SEQRES 8 T 237 VAL GLU VAL SER VAL PRO VAL HIS THR THR GLY ARG SER \ SEQRES 9 T 237 GLN GLY GLU VAL GLN GLY GLY LEU VAL ASP ILE VAL VAL \ SEQRES 10 T 237 HIS ASN LEU GLN ILE VAL ALA PRO GLY PRO ARG ARG ILE \ SEQRES 11 T 237 PRO GLN GLU LEU VAL VAL ASP VAL THR LYS MET ASN ILE \ SEQRES 12 T 237 GLY ASP HIS ILE THR ALA GLY ASP ILE LYS LEU PRO GLU \ SEQRES 13 T 237 GLY CYS THR LEU ALA ALA ASP PRO GLU LEU THR VAL VAL \ SEQRES 14 T 237 SER VAL LEU PRO PRO ARG LEU THR ALA GLU GLU LEU GLU \ SEQRES 15 T 237 ALA GLU VAL GLN ALA ALA GLN VAL ALA GLY LEU VAL ALA \ SEQRES 16 T 237 ALA GLY GLU LEU SER GLU GLU ALA ALA GLU ALA VAL LEU \ SEQRES 17 T 237 GLU GLY ASP ALA SER LEU GLU GLU VAL LYS ALA GLU ALA \ SEQRES 18 T 237 SER GLU ASP ASN ALA GLY THR ASP SER GLU ASP ASN SER \ SEQRES 19 T 237 ASP ALA GLN \ MODRES 1NJP PPU 5 35 A PUROMYCIN-5'-MONOPHOSPHATE \ HET PPU 5 35 37 \ HETNAM PPU PUROMYCIN-5'-MONOPHOSPHATE \ FORMUL 2 PPU C22 H30 N7 O8 P \ LINK O3' C 5 34 P PPU 5 35 1555 1555 1.61 \ CRYST1 169.900 409.900 695.900 90.00 90.00 90.00 I 2 2 2 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.005886 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.002440 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.001437 0.00000 \ TER 59360 A 02877 \ TER 59904 PPU 5 35 \ ATOM 59905 CA THR K 8 93.467 105.953 81.077 1.00 40.70 C \ ATOM 59906 CA LYS K 9 91.100 108.169 79.005 1.00 40.70 C \ ATOM 59907 CA PHE K 10 91.740 110.824 76.322 1.00 40.70 C \ ATOM 59908 CA ARG K 11 93.123 114.360 76.783 1.00 40.70 C \ ATOM 59909 CA LYS K 12 90.567 116.118 74.550 1.00 40.70 C \ ATOM 59910 CA GLN K 13 86.989 114.771 74.417 1.00 40.70 C \ ATOM 59911 CA PHE K 14 83.359 115.809 75.009 1.00 40.70 C \ ATOM 59912 CA ARG K 15 81.476 114.910 78.211 1.00 40.70 C \ ATOM 59913 CA GLY K 16 78.143 113.139 77.743 1.00 40.70 C \ ATOM 59914 CA ARG K 17 77.894 109.981 75.572 1.00 40.70 C \ ATOM 59915 CA MET K 18 75.016 107.570 74.847 1.00 40.70 C \ ATOM 59916 CA THR K 19 74.042 104.816 77.308 1.00 40.70 C \ ATOM 59917 CA GLY K 20 72.987 101.420 75.964 1.00 40.70 C \ ATOM 59918 CA ASP K 21 74.415 97.907 75.575 1.00 40.70 C \ ATOM 59919 CA ALA K 22 74.172 96.345 72.098 1.00 40.70 C \ ATOM 59920 CA LYS K 23 75.489 93.272 70.248 1.00 40.70 C \ ATOM 59921 CA GLY K 24 78.505 93.773 67.988 1.00 40.70 C \ ATOM 59922 CA GLY K 25 80.016 91.569 65.295 1.00 40.70 C \ ATOM 59923 CA ASP K 26 83.710 91.801 66.203 1.00 40.70 C \ ATOM 59924 CA TYR K 27 85.970 88.874 67.157 1.00 40.70 C \ ATOM 59925 CA VAL K 28 89.777 88.613 67.022 1.00 40.70 C \ ATOM 59926 CA ALA K 29 92.307 86.098 68.376 1.00 40.70 C \ ATOM 59927 CA PHE K 30 95.676 87.575 67.239 1.00 40.70 C \ ATOM 59928 CA GLY K 31 98.871 86.620 69.120 1.00 40.70 C \ ATOM 59929 CA ASP K 32 97.071 85.689 72.348 1.00 40.70 C \ ATOM 59930 CA TYR K 33 95.483 82.625 73.994 1.00 40.70 C \ ATOM 59931 CA GLY K 34 91.977 83.948 74.664 1.00 40.70 C \ ATOM 59932 CA LEU K 35 90.191 85.775 77.527 1.00 40.70 C \ ATOM 59933 CA ILE K 36 86.983 87.540 76.402 1.00 40.70 C \ ATOM 59934 CA ALA K 37 83.423 88.370 77.526 1.00 40.70 C \ ATOM 59935 CA MET K 38 80.449 86.110 76.707 1.00 40.70 C \ ATOM 59936 CA GLU K 39 77.528 88.468 77.435 1.00 40.70 C \ ATOM 59937 CA PRO K 40 77.043 92.249 77.101 1.00 40.70 C \ ATOM 59938 CA ALA K 41 78.511 94.121 80.093 1.00 40.70 C \ ATOM 59939 CA TRP K 42 79.913 97.623 80.685 1.00 40.70 C \ ATOM 59940 CA ILE K 43 83.480 97.993 81.997 1.00 40.70 C \ ATOM 59941 CA LYS K 44 84.601 100.889 84.224 1.00 40.70 C \ ATOM 59942 CA SER K 45 87.816 102.970 84.127 1.00 40.70 C \ ATOM 59943 CA ASN K 46 88.865 101.935 87.659 1.00 40.70 C \ ATOM 59944 CA GLN K 47 88.077 98.240 87.046 1.00 40.70 C \ ATOM 59945 CA ILE K 48 90.131 98.077 83.818 1.00 40.70 C \ ATOM 59946 CA GLU K 49 93.260 99.603 85.410 1.00 40.70 C \ ATOM 59947 CA ALA K 50 93.221 97.194 88.383 1.00 40.70 C \ ATOM 59948 CA CYS K 51 92.772 94.074 86.210 1.00 40.70 C \ ATOM 59949 CA ARG K 52 95.606 95.010 83.811 1.00 40.70 C \ ATOM 59950 CA ILE K 53 98.095 95.539 86.669 1.00 40.70 C \ ATOM 59951 CA VAL K 54 97.327 92.165 88.305 1.00 40.70 C \ ATOM 59952 CA MET K 55 97.572 90.121 85.078 1.00 40.70 C \ ATOM 59953 CA SER K 56 100.994 91.613 84.228 1.00 40.70 C \ ATOM 59954 CA ARG K 57 102.787 91.391 87.598 1.00 40.70 C \ ATOM 59955 CA HIS K 58 101.336 88.211 89.152 1.00 40.70 C \ ATOM 59956 CA PHE K 59 101.496 86.012 86.024 1.00 40.70 C \ ATOM 59957 CA ARG K 60 105.019 86.123 84.552 1.00 40.70 C \ ATOM 59958 CA ARG K 61 108.534 87.457 85.270 1.00 40.70 C \ ATOM 59959 CA GLY K 62 108.736 89.972 82.417 1.00 40.70 C \ ATOM 59960 CA GLY K 63 106.393 89.370 79.493 1.00 40.70 C \ ATOM 59961 CA LYS K 64 104.303 91.489 77.116 1.00 40.70 C \ ATOM 59962 CA ILE K 65 100.738 92.639 77.859 1.00 40.70 C \ ATOM 59963 CA TYR K 66 98.217 94.551 75.724 1.00 40.70 C \ ATOM 59964 CA ILE K 67 94.599 95.722 76.043 1.00 40.70 C \ ATOM 59965 CA ARG K 68 92.146 95.974 73.125 1.00 40.70 C \ ATOM 59966 CA ILE K 69 89.210 97.445 75.080 1.00 40.70 C \ ATOM 59967 CA PHE K 70 89.736 101.017 76.323 1.00 40.70 C \ ATOM 59968 CA PRO K 71 87.691 104.009 77.552 1.00 40.70 C \ ATOM 59969 CA ASP K 72 85.644 105.597 74.747 1.00 40.70 C \ ATOM 59970 CA LYS K 73 82.325 106.543 76.388 1.00 40.70 C \ ATOM 59971 CA PRO K 74 81.862 108.861 79.390 1.00 40.70 C \ ATOM 59972 CA VAL K 75 79.510 108.329 82.349 1.00 40.70 C \ ATOM 59973 CA THR K 76 78.093 111.235 84.384 1.00 40.70 C \ ATOM 59974 CA LYS K 77 78.042 110.921 88.193 1.00 40.70 C \ ATOM 59975 CA LYS K 78 76.140 112.890 90.866 1.00 40.70 C \ ATOM 59976 CA PRO K 79 77.454 114.926 93.835 1.00 40.70 C \ ATOM 59977 CA ALA K 80 76.747 114.699 97.612 1.00 40.70 C \ ATOM 59978 CA GLU K 81 73.252 116.231 97.431 1.00 40.70 C \ ATOM 59979 CA THR K 82 70.486 114.947 95.139 1.00 40.70 C \ ATOM 59980 CA ARG K 83 68.401 117.142 92.772 1.00 40.70 C \ ATOM 59981 CA MET K 84 70.288 120.383 92.021 1.00 40.70 C \ ATOM 59982 CA GLY K 85 71.095 120.226 88.309 1.00 40.70 C \ ATOM 59983 CA LYS K 86 71.566 117.518 85.666 1.00 40.70 C \ ATOM 59984 CA GLY K 87 75.131 117.131 84.391 1.00 40.70 C \ ATOM 59985 CA LYS K 88 78.261 117.274 86.554 1.00 40.70 C \ ATOM 59986 CA GLY K 89 81.902 116.146 86.291 1.00 40.70 C \ ATOM 59987 CA ALA K 90 82.916 112.624 85.229 1.00 40.70 C \ ATOM 59988 CA VAL K 91 84.793 110.350 87.655 1.00 40.70 C \ ATOM 59989 CA GLU K 92 84.661 106.961 85.895 1.00 40.70 C \ ATOM 59990 CA TYR K 93 84.452 106.370 82.127 1.00 40.70 C \ ATOM 59991 CA TRP K 94 82.351 103.587 80.560 1.00 40.70 C \ ATOM 59992 CA VAL K 95 83.248 101.121 77.776 1.00 40.70 C \ ATOM 59993 CA SER K 96 81.276 99.119 75.190 1.00 40.70 C \ ATOM 59994 CA VAL K 97 81.954 95.370 74.888 1.00 40.70 C \ ATOM 59995 CA VAL K 98 79.996 92.322 73.668 1.00 40.70 C \ ATOM 59996 CA LYS K 99 82.380 89.686 72.248 1.00 40.70 C \ ATOM 59997 CA PRO K 100 85.659 91.665 72.143 1.00 40.70 C \ ATOM 59998 CA GLY K 101 88.789 90.853 74.159 1.00 40.70 C \ ATOM 59999 CA ARG K 102 89.408 92.749 77.410 1.00 40.70 C \ ATOM 60000 CA VAL K 103 92.809 91.279 78.335 1.00 40.70 C \ ATOM 60001 CA MET K 104 95.428 89.819 75.975 1.00 40.70 C \ ATOM 60002 CA PHE K 105 98.601 87.935 76.955 1.00 40.70 C \ ATOM 60003 CA GLU K 106 101.094 85.707 75.105 1.00 40.70 C \ ATOM 60004 CA VAL K 107 102.815 83.616 77.852 1.00 40.70 C \ ATOM 60005 CA ALA K 108 104.158 80.028 77.682 1.00 40.70 C \ ATOM 60006 CA GLY K 109 101.690 78.125 79.865 1.00 40.70 C \ ATOM 60007 CA VAL K 110 100.297 80.497 82.506 1.00 40.70 C \ ATOM 60008 CA THR K 111 97.117 81.587 80.673 1.00 40.70 C \ ATOM 60009 CA GLU K 112 94.850 79.530 82.973 1.00 40.70 C \ ATOM 60010 CA GLU K 113 96.178 81.166 86.168 1.00 40.70 C \ ATOM 60011 CA GLN K 114 95.877 84.721 84.782 1.00 40.70 C \ ATOM 60012 CA ALA K 115 92.239 84.187 83.716 1.00 40.70 C \ ATOM 60013 CA LYS K 116 91.131 83.405 87.299 1.00 40.70 C \ ATOM 60014 CA GLU K 117 92.338 86.746 88.724 1.00 40.70 C \ ATOM 60015 CA ALA K 118 90.821 88.779 85.859 1.00 40.70 C \ ATOM 60016 CA PHE K 119 87.394 87.107 86.245 1.00 40.70 C \ ATOM 60017 CA ARG K 120 86.760 88.563 89.727 1.00 40.70 C \ ATOM 60018 CA LEU K 121 87.488 92.126 88.542 1.00 40.70 C \ ATOM 60019 CA ALA K 122 85.667 91.889 85.180 1.00 40.70 C \ ATOM 60020 CA GLY K 123 81.994 92.687 85.795 1.00 40.70 C \ ATOM 60021 CA HIS K 124 79.322 90.028 85.245 1.00 40.70 C \ ATOM 60022 CA LYS K 125 80.467 87.481 82.635 1.00 40.70 C \ ATOM 60023 CA LEU K 126 83.970 86.214 81.783 1.00 40.70 C \ ATOM 60024 CA PRO K 127 85.136 83.176 79.780 1.00 40.70 C \ ATOM 60025 CA ILE K 128 88.511 81.645 78.865 1.00 40.70 C \ ATOM 60026 CA GLN K 129 89.398 80.257 75.421 1.00 40.70 C \ ATOM 60027 CA THR K 130 92.292 78.304 73.878 1.00 40.70 C \ ATOM 60028 CA LYS K 131 94.070 79.255 70.601 1.00 40.70 C \ TER 60029 LYS K 131 \ TER 60253 GLU T 223 \ CONECT5985559867 \ CONECT5986759855598685986959883 \ CONECT5986859867 \ CONECT5986959867 \ CONECT5987059871 \ CONECT59871598705987259874 \ CONECT59872598715987359888 \ CONECT5987359872 \ CONECT598745987159875 \ CONECT59875598745987659877 \ CONECT598765987559878 \ CONECT598775987559879 \ CONECT598785987659880 \ CONECT598795987759880 \ CONECT59880598785987959881 \ CONECT598815988059882 \ CONECT5988259881 \ CONECT598835986759884 \ CONECT598845988359885 \ CONECT59885598845988659887 \ CONECT598865988559891 \ CONECT59887598855988859889 \ CONECT598885987259887 \ CONECT59889598875989059891 \ CONECT5989059889 \ CONECT59891598865988959892 \ CONECT59892598915989359902 \ CONECT598935989259894 \ CONECT598945989359895 \ CONECT59895598945989659902 \ CONECT59896598955989759900 \ CONECT59897598965989859899 \ CONECT5989859897 \ CONECT5989959897 \ CONECT599005989659901 \ CONECT599015990059903 \ CONECT59902598925989559903 \ CONECT599035990159902 \ MASTER 424 0 1 0 0 0 0 660249 4 38 255 \ END \ """, "1njpchainK") cmd.hide("all") cmd.color('grey70', "1njpchainK") cmd.show('cartoon', "1njpchainK") cmd.center("1njpchainK", state=0, origin=1) cmd.zoom("1njpchainK", animate=-1) cmd.select("e1njpK1", "c. K & i. 8-130") cmd.color("red", "e1njpK1") cmd.disable("e1njpK1")