cmd.read_pdbstr("""\ HEADER BLOOD CLOTTING 09-OCT-17 6EO9 \ TITLE CRYSTAL STRUCTURE OF THROMBIN IN COMPLEX WITH A NOVEL GLUCOSE- \ TITLE 2 CONJUGATED POTENT INHIBITOR \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: PROTHROMBIN; \ COMPND 3 CHAIN: H; \ COMPND 4 SYNONYM: COAGULATION FACTOR II; \ COMPND 5 EC: 3.4.21.5; \ COMPND 6 ENGINEERED: YES; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: PROTHROMBIN; \ COMPND 9 CHAIN: L; \ COMPND 10 SYNONYM: COAGULATION FACTOR II; \ COMPND 11 EC: 3.4.21.5; \ COMPND 12 ENGINEERED: YES; \ COMPND 13 MOL_ID: 3; \ COMPND 14 MOLECULE: HIRUDIN VARIANT-2; \ COMPND 15 CHAIN: I; \ COMPND 16 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 3 ORGANISM_COMMON: HUMAN; \ SOURCE 4 ORGANISM_TAXID: 9606; \ SOURCE 5 GENE: F2; \ SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; \ SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; \ SOURCE 8 MOL_ID: 2; \ SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 10 ORGANISM_COMMON: HUMAN; \ SOURCE 11 ORGANISM_TAXID: 9606; \ SOURCE 12 GENE: F2; \ SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; \ SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; \ SOURCE 15 MOL_ID: 3; \ SOURCE 16 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS; \ SOURCE 17 ORGANISM_COMMON: MEDICINAL LEECH; \ SOURCE 18 ORGANISM_TAXID: 6421; \ SOURCE 19 EXPRESSION_SYSTEM: HIRUDO MEDICINALIS; \ SOURCE 20 EXPRESSION_SYSTEM_TAXID: 6421 \ KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX, BLOOD CLOTTING \ EXPDTA X-RAY DIFFRACTION \ AUTHOR B.D.BELVISO,R.CALIANDRO,B.M.ARESTA,M.DE CANDIA,C.D.ALTOMARE \ REVDAT 4 20-NOV-24 6EO9 1 REMARK \ REVDAT 3 16-OCT-19 6EO9 1 REMARK \ REVDAT 2 07-MAR-18 6EO9 1 SOURCE \ REVDAT 1 13-DEC-17 6EO9 0 \ SPRSDE 13-DEC-17 6EO9 4NZE \ JRNL AUTH B.D.BELVISO,R.CALIANDRO,M.DE CANDIA,G.ZAETTA,G.LOPOPOLO, \ JRNL AUTH 2 F.INCAMPO,M.COLUCCI,C.D.ALTOMARE \ JRNL TITL HOW A BETA-D-GLUCOSIDE SIDE CHAIN ENHANCES BINDING AFFINITY \ JRNL TITL 2 TO THROMBIN OF INHIBITORS BEARING 2-CHLOROTHIOPHENE AS P1 \ JRNL TITL 3 MOIETY: CRYSTALLOGRAPHY, FRAGMENT DECONSTRUCTION STUDY, AND \ JRNL TITL 4 EVALUATION OF ANTITHROMBOTIC PROPERTIES. \ JRNL REF J. MED. CHEM. V. 57 8563 2014 \ JRNL REFN ISSN 1520-4804 \ JRNL PMID 25268757 \ JRNL DOI 10.1021/JM5010754 \ REMARK 2 \ REMARK 2 RESOLUTION. 1.84 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.8.0158 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.86 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL \ REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 \ REMARK 3 NUMBER OF REFLECTIONS : 26949 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 \ REMARK 3 R VALUE (WORKING SET) : 0.198 \ REMARK 3 FREE R VALUE : 0.248 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 \ REMARK 3 FREE R VALUE TEST SET COUNT : 1434 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : 20 \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 1982 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.12 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 \ REMARK 3 BIN FREE R VALUE SET COUNT : 99 \ REMARK 3 BIN FREE R VALUE : 0.3300 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 2317 \ REMARK 3 NUCLEIC ACID ATOMS : 0 \ REMARK 3 HETEROGEN ATOMS : 83 \ REMARK 3 SOLVENT ATOMS : 118 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.56 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : -0.01000 \ REMARK 3 B22 (A**2) : -0.01000 \ REMARK 3 B33 (A**2) : 0.00000 \ REMARK 3 B12 (A**2) : 0.00000 \ REMARK 3 B13 (A**2) : 0.04000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.145 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.798 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2473 ; 0.018 ; 0.020 \ REMARK 3 BOND LENGTHS OTHERS (A): 2307 ; 0.004 ; 0.020 \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3339 ; 2.043 ; 1.999 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): 5351 ; 1.235 ; 3.010 \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 7.211 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;36.756 ;23.421 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 429 ;16.095 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;19.446 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 350 ; 0.129 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2653 ; 0.010 ; 0.021 \ REMARK 3 GENERAL PLANES OTHERS (A): 514 ; 0.002 ; 0.020 \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 2.746 ; 2.683 \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1136 ; 2.745 ; 2.681 \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1414 ; 3.928 ; 3.998 \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1415 ; 3.927 ; 4.002 \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1336 ; 3.465 ; 3.356 \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1337 ; 3.464 ; 3.356 \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1923 ; 5.143 ; 4.862 \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2777 ; 7.949 ;32.936 \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2778 ; 7.947 ;32.933 \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING \ REMARK 3 POSITIONS \ REMARK 4 \ REMARK 4 6EO9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-17. \ REMARK 100 THE DEPOSITION ID IS D_1200006964. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 14-DEC-12 \ REMARK 200 TEMPERATURE (KELVIN) : 100 \ REMARK 200 PH : NULL \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : DIAMOND \ REMARK 200 BEAMLINE : I24 \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 0.979500 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : PIXEL \ REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM \ REMARK 200 DATA SCALING SOFTWARE : SCALA \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26949 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 \ REMARK 200 RESOLUTION RANGE LOW (A) : 37.860 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 \ REMARK 200 DATA REDUNDANCY : 3.300 \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 2.0000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: SIR2014 REMO \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 48.98 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.1M HEPES PH7.0, 0.75M \ REMARK 280 NACL, 0.04% NAN3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE \ REMARK 280 277K, TEMPERATURE 293K, VAPOR DIFFUSION, SITTING DROP \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,Y,-Z \ REMARK 290 3555 X+1/2,Y+1/2,Z \ REMARK 290 4555 -X+1/2,Y+1/2,-Z \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 33.73000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.82000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 33.73000 \ REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.82000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 12720 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, I \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 375 \ REMARK 375 SPECIAL POSITION \ REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS \ REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL \ REMARK 375 POSITIONS. \ REMARK 375 \ REMARK 375 ATOM RES CSSEQI \ REMARK 375 HOH H 506 LIES ON A SPECIAL POSITION. \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 TRP H 147A \ REMARK 465 THR H 147B \ REMARK 465 ALA H 147C \ REMARK 465 ASN H 147D \ REMARK 465 VAL H 147E \ REMARK 465 GLY H 147F \ REMARK 465 LYS H 147G \ REMARK 465 GLY H 246 \ REMARK 465 GLU H 247 \ REMARK 465 THR L -5 \ REMARK 465 PHE L -4 \ REMARK 465 GLY L -3 \ REMARK 465 SER L -2 \ REMARK 465 GLY L -1 \ REMARK 465 GLU L 0 \ REMARK 465 ILE L 15 \ REMARK 465 ASP L 16 \ REMARK 465 GLY L 17 \ REMARK 465 ARG L 18 \ REMARK 465 ASN I 53 \ REMARK 465 GLY I 54 \ REMARK 465 ASP I 55 \ REMARK 465 LEU I 64 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 O DMS H 306 O HOH H 401 2.09 \ REMARK 500 ND2 ASN H 60G O HOH H 402 2.15 \ REMARK 500 O LYS H 110 O HOH H 403 2.16 \ REMARK 500 O PRO H 186 O HOH H 404 2.18 \ REMARK 500 OD2 ASP H 125 O HOH H 405 2.18 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION \ REMARK 500 GLU H 217 C GLY H 219 N 0.302 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 ARG H 35 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 SER H 48 -169.18 -166.58 \ REMARK 500 ASN H 60G 83.06 -153.51 \ REMARK 500 HIS H 71 -58.54 -128.66 \ REMARK 500 ILE H 79 -65.57 -127.17 \ REMARK 500 ILE H 79 -63.34 -128.29 \ REMARK 500 GLU H 97A -69.85 -125.92 \ REMARK 500 GLN H 244 -31.94 178.11 \ REMARK 500 PHE L 7 -85.89 -130.42 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY \ REMARK 500 \ REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY \ REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER \ REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; \ REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; \ REMARK 500 I=INSERTION CODE). \ REMARK 500 \ REMARK 500 M RES CSSEQI ANGLE \ REMARK 500 GLU H 217 11.99 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 800 \ REMARK 800 SITE \ REMARK 800 SITE_IDENTIFIER: AC1 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 301 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC2 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 302 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC3 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 303 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC4 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 304 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC5 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 305 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC6 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue DMS H 306 \ REMARK 800 \ REMARK 800 SITE_IDENTIFIER: AC7 \ REMARK 800 EVIDENCE_CODE: SOFTWARE \ REMARK 800 SITE_DESCRIPTION: binding site for residue 2OJ H 307 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 6EO8 RELATED DB: PDB \ DBREF 6EO9 H 16 247 UNP P00734 THRB_HUMAN 364 622 \ DBREF 6EO9 L -5 18 UNP P00734 THRB_HUMAN 328 363 \ DBREF 6EO9 I 53 64 UNP P09945 HIRV2_HIRME 60 71 \ SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO \ SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU \ SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU \ SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS \ SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS \ SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE \ SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN \ SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS \ SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO \ SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU \ SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN \ SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN \ SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU \ SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR \ SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY \ SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO \ SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN \ SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP \ SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS \ SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU \ SEQRES 1 L 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO \ SEQRES 2 L 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG \ SEQRES 3 L 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG \ SEQRES 1 I 12 ASN GLY ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU \ MODRES 6EO9 TYS I 63 TYR MODIFIED RESIDUE \ HET TYS I 63 16 \ HET DMS H 301 4 \ HET DMS H 302 4 \ HET DMS H 303 4 \ HET DMS H 304 4 \ HET DMS H 305 4 \ HET DMS H 306 4 \ HET 2OJ H 307 59 \ HETNAM TYS O-SULFO-L-TYROSINE \ HETNAM DMS DIMETHYL SULFOXIDE \ HETNAM 2OJ N-(2-{[5-(5-CHLOROTHIOPHEN-2-YL)-1,2-OXAZOL-3- \ HETNAM 2 2OJ YL]METHOXY}-6-{3-[(2,3,4,6-TETRA-O-ACETYL-BETA-D- \ HETNAM 3 2OJ GLUCOPYRANOSYL)OXY]PROPOXY}PHENYL)-1-(PROPAN-2-YL) \ HETNAM 4 2OJ PIPERIDINE-4-CARBOXAMIDE \ FORMUL 3 TYS C9 H11 N O6 S \ FORMUL 4 DMS 6(C2 H6 O S) \ FORMUL 10 2OJ C40 H50 CL N3 O14 S \ FORMUL 11 HOH *118(H2 O) \ HELIX 1 AA1 ALA H 55 CYS H 58 5 4 \ HELIX 2 AA2 PRO H 60B ASP H 60E 5 4 \ HELIX 3 AA3 THR H 60I ASN H 62 5 3 \ HELIX 4 AA4 ASP H 125 LEU H 130 1 9 \ HELIX 5 AA5 GLU H 164 SER H 171 1 8 \ HELIX 6 AA6 LEU H 234 ASP H 243 1 10 \ HELIX 7 AA7 PHE L 7 SER L 11 5 5 \ HELIX 8 AA8 THR L 14B TYR L 14J 1 9 \ SHEET 1 AA1 7 SER H 20 ASP H 21 0 \ SHEET 2 AA1 7 GLN H 156 PRO H 161 -1 O VAL H 157 N SER H 20 \ SHEET 3 AA1 7 LYS H 135 GLY H 140 -1 N VAL H 138 O VAL H 158 \ SHEET 4 AA1 7 PRO H 198 LYS H 202 -1 O VAL H 200 N ARG H 137 \ SHEET 5 AA1 7 TRP H 207 TRP H 215 -1 O TYR H 208 N MET H 201 \ SHEET 6 AA1 7 GLY H 226 HIS H 230 -1 O PHE H 227 N TRP H 215 \ SHEET 7 AA1 7 MET H 180 ALA H 183 -1 N PHE H 181 O TYR H 228 \ SHEET 1 AA2 7 GLN H 30 ARG H 35 0 \ SHEET 2 AA2 7 GLU H 39 LEU H 46 -1 O GLU H 39 N ARG H 35 \ SHEET 3 AA2 7 TRP H 51 THR H 54 -1 O LEU H 53 N SER H 45 \ SHEET 4 AA2 7 ALA H 104 LEU H 108 -1 O ALA H 104 N THR H 54 \ SHEET 5 AA2 7 LYS H 81 ILE H 90 -1 N LYS H 87 O LYS H 107 \ SHEET 6 AA2 7 LEU H 64 ILE H 68 -1 N VAL H 66 O SER H 83 \ SHEET 7 AA2 7 GLN H 30 ARG H 35 -1 N PHE H 34 O LEU H 65 \ SHEET 1 AA3 2 LEU H 60 TYR H 60A 0 \ SHEET 2 AA3 2 LYS H 60F ASN H 60G-1 O LYS H 60F N TYR H 60A \ SSBOND 1 CYS H 42 CYS H 58 1555 1555 2.01 \ SSBOND 2 CYS H 122 CYS L 1 1555 1555 2.05 \ SSBOND 3 CYS H 168 CYS H 182 1555 1555 2.04 \ SSBOND 4 CYS H 191 CYS H 220 1555 1555 2.07 \ LINK C GLU I 62 N TYS I 63 1555 1555 1.34 \ CISPEP 1 SER H 36A PRO H 37 0 -12.47 \ SITE 1 AC1 4 SER H 20 ASN H 159 LYS H 186D THR L 14B \ SITE 1 AC2 4 ASP H 100 THR H 177 ASP H 178 ASN H 179 \ SITE 1 AC3 3 ARG H 101 ARG H 233 LEU H 234 \ SITE 1 AC4 5 LEU H 130 ILE H 162 ARG H 165 PHE H 181 \ SITE 2 AC4 5 HOH H 445 \ SITE 1 AC5 5 SER H 129B TYR H 134 ARG H 173 PHE H 204A \ SITE 2 AC5 5 TYR L 14J \ SITE 1 AC6 6 HIS H 57 TRP H 60D LEU H 99 SER H 214 \ SITE 2 AC6 6 2OJ H 307 HOH H 401 \ SITE 1 AC7 16 TYR H 60A GLU H 97A ILE H 174 ASP H 189 \ SITE 2 AC7 16 ALA H 190 GLU H 192 VAL H 213 TRP H 215 \ SITE 3 AC7 16 GLY H 216 GLU H 217 GLY H 219 GLY H 226 \ SITE 4 AC7 16 PHE H 227 TYR H 228 DMS H 306 HOH H 491 \ CRYST1 67.460 71.640 71.800 90.00 100.21 90.00 C 1 2 1 4 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.014824 0.000000 0.002670 0.00000 \ SCALE2 0.000000 0.013959 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.014152 0.00000 \ TER 2039 PHE H 245 \ ATOM 2040 N ALA L 1B 13.609 20.033 15.445 1.00 46.27 N \ ATOM 2041 CA ALA L 1B 14.264 21.416 15.396 1.00 43.40 C \ ATOM 2042 C ALA L 1B 15.782 21.254 15.272 1.00 32.85 C \ ATOM 2043 O ALA L 1B 16.357 21.499 14.222 1.00 30.77 O \ ATOM 2044 CB ALA L 1B 13.897 22.260 16.624 1.00 44.09 C \ ATOM 2045 N ASP L 1A 16.420 20.774 16.334 1.00 28.19 N \ ATOM 2046 CA ASP L 1A 17.768 20.289 16.215 1.00 28.03 C \ ATOM 2047 C ASP L 1A 17.758 18.741 16.170 1.00 25.81 C \ ATOM 2048 O ASP L 1A 18.760 18.141 16.545 1.00 23.10 O \ ATOM 2049 CB ASP L 1A 18.660 20.814 17.360 1.00 29.94 C \ ATOM 2050 CG ASP L 1A 18.153 20.413 18.713 1.00 36.89 C \ ATOM 2051 OD1 ASP L 1A 17.013 19.885 18.840 1.00 39.61 O \ ATOM 2052 OD2 ASP L 1A 18.911 20.635 19.675 1.00 41.19 O \ ATOM 2053 N CYS L 1 16.636 18.130 15.725 1.00 22.23 N \ ATOM 2054 CA CYS L 1 16.542 16.668 15.544 1.00 19.64 C \ ATOM 2055 C CYS L 1 17.702 16.190 14.736 1.00 17.66 C \ ATOM 2056 O CYS L 1 18.174 16.886 13.792 1.00 18.12 O \ ATOM 2057 CB CYS L 1 15.184 16.245 14.915 1.00 20.75 C \ ATOM 2058 SG CYS L 1 14.946 16.624 13.189 1.00 21.30 S \ ATOM 2059 N GLY L 2 18.178 14.994 15.107 1.00 15.92 N \ ATOM 2060 CA GLY L 2 19.168 14.293 14.349 1.00 14.95 C \ ATOM 2061 C GLY L 2 20.564 14.840 14.315 1.00 16.58 C \ ATOM 2062 O GLY L 2 21.425 14.349 13.561 1.00 17.38 O \ ATOM 2063 N LEU L 3 20.834 15.803 15.193 1.00 16.09 N \ ATOM 2064 CA LEU L 3 22.176 16.366 15.290 1.00 16.34 C \ ATOM 2065 C LEU L 3 22.671 15.968 16.647 1.00 15.21 C \ ATOM 2066 O LEU L 3 22.125 16.430 17.656 1.00 15.69 O \ ATOM 2067 CB LEU L 3 22.074 17.886 15.128 1.00 17.90 C \ ATOM 2068 CG LEU L 3 21.726 18.416 13.708 1.00 19.08 C \ ATOM 2069 CD1 LEU L 3 21.637 19.928 13.773 1.00 24.23 C \ ATOM 2070 CD2 LEU L 3 22.732 18.040 12.621 1.00 20.96 C \ ATOM 2071 N ARG L 4 23.667 15.119 16.688 1.00 15.72 N \ ATOM 2072 CA ARG L 4 24.089 14.517 17.964 1.00 15.78 C \ ATOM 2073 C ARG L 4 24.992 15.471 18.723 1.00 17.56 C \ ATOM 2074 O ARG L 4 25.995 15.936 18.159 1.00 20.03 O \ ATOM 2075 CB ARG L 4 24.774 13.191 17.802 1.00 15.18 C \ ATOM 2076 CG ARG L 4 23.955 12.177 16.954 1.00 16.16 C \ ATOM 2077 CD ARG L 4 24.783 10.999 16.534 1.00 15.59 C \ ATOM 2078 NE ARG L 4 25.654 11.366 15.480 1.00 16.18 N \ ATOM 2079 CZ ARG L 4 26.571 10.552 14.951 1.00 15.73 C \ ATOM 2080 NH1 ARG L 4 26.708 9.321 15.405 1.00 14.72 N \ ATOM 2081 NH2 ARG L 4 27.334 10.973 13.958 1.00 16.20 N \ ATOM 2082 N PRO L 5 24.707 15.647 20.008 1.00 17.81 N \ ATOM 2083 CA PRO L 5 25.554 16.457 20.909 1.00 18.48 C \ ATOM 2084 C PRO L 5 27.029 16.142 20.853 1.00 18.91 C \ ATOM 2085 O PRO L 5 27.872 17.096 20.822 1.00 22.91 O \ ATOM 2086 CB PRO L 5 24.958 16.181 22.272 1.00 17.46 C \ ATOM 2087 CG PRO L 5 23.512 15.973 22.018 1.00 18.97 C \ ATOM 2088 CD PRO L 5 23.488 15.193 20.714 1.00 16.88 C \ ATOM 2089 N LEU L 6 27.388 14.873 20.812 1.00 17.73 N \ ATOM 2090 CA LEU L 6 28.761 14.472 20.820 1.00 19.23 C \ ATOM 2091 C LEU L 6 29.446 14.323 19.480 1.00 19.73 C \ ATOM 2092 O LEU L 6 30.646 14.002 19.455 1.00 20.08 O \ ATOM 2093 CB LEU L 6 28.977 13.230 21.678 1.00 19.95 C \ ATOM 2094 CG LEU L 6 28.637 13.349 23.177 1.00 22.17 C \ ATOM 2095 CD1 LEU L 6 28.947 12.004 23.838 1.00 19.90 C \ ATOM 2096 CD2 LEU L 6 29.355 14.533 23.863 1.00 24.10 C \ ATOM 2097 N PHE L 7 28.719 14.522 18.371 1.00 19.90 N \ ATOM 2098 CA PHE L 7 29.273 14.359 17.055 1.00 19.01 C \ ATOM 2099 C PHE L 7 28.927 15.620 16.205 1.00 19.86 C \ ATOM 2100 O PHE L 7 29.713 16.632 16.244 1.00 20.42 O \ ATOM 2101 CB PHE L 7 28.784 13.039 16.463 1.00 17.95 C \ ATOM 2102 CG PHE L 7 29.395 11.858 17.118 1.00 17.54 C \ ATOM 2103 CD1 PHE L 7 30.672 11.455 16.781 1.00 17.06 C \ ATOM 2104 CD2 PHE L 7 28.750 11.231 18.179 1.00 17.62 C \ ATOM 2105 CE1 PHE L 7 31.262 10.399 17.431 1.00 18.17 C \ ATOM 2106 CE2 PHE L 7 29.325 10.159 18.805 1.00 17.09 C \ ATOM 2107 CZ PHE L 7 30.573 9.740 18.434 1.00 18.92 C \ ATOM 2108 N GLU L 8 27.748 15.664 15.563 1.00 17.77 N \ ATOM 2109 CA GLU L 8 27.403 16.796 14.664 1.00 19.11 C \ ATOM 2110 C GLU L 8 27.485 18.145 15.373 1.00 22.86 C \ ATOM 2111 O GLU L 8 27.948 19.089 14.789 1.00 22.18 O \ ATOM 2112 CB GLU L 8 26.010 16.688 14.030 1.00 20.23 C \ ATOM 2113 CG GLU L 8 26.002 15.633 12.920 1.00 18.18 C \ ATOM 2114 CD GLU L 8 25.921 14.209 13.467 1.00 17.67 C \ ATOM 2115 OE1 GLU L 8 25.618 14.046 14.679 1.00 15.69 O \ ATOM 2116 OE2 GLU L 8 26.234 13.268 12.718 1.00 17.23 O \ ATOM 2117 N LYS L 9 27.021 18.241 16.619 1.00 24.38 N \ ATOM 2118 CA LYS L 9 27.075 19.505 17.350 1.00 24.90 C \ ATOM 2119 C LYS L 9 28.472 19.950 17.721 1.00 24.26 C \ ATOM 2120 O LYS L 9 28.656 21.100 18.208 1.00 26.92 O \ ATOM 2121 CB LYS L 9 26.209 19.428 18.624 1.00 24.21 C \ ATOM 2122 CG LYS L 9 24.768 19.161 18.323 1.00 27.04 C \ ATOM 2123 CD LYS L 9 23.817 19.579 19.405 1.00 30.89 C \ ATOM 2124 CE LYS L 9 22.407 19.627 18.877 1.00 34.10 C \ ATOM 2125 NZ LYS L 9 21.641 20.554 19.719 1.00 37.07 N \ ATOM 2126 N LYS L 10 29.453 19.068 17.590 1.00 23.46 N \ ATOM 2127 CA LYS L 10 30.863 19.392 17.836 1.00 26.61 C \ ATOM 2128 C LYS L 10 31.685 19.258 16.592 1.00 27.57 C \ ATOM 2129 O LYS L 10 32.933 19.253 16.639 1.00 28.92 O \ ATOM 2130 CB LYS L 10 31.424 18.458 18.915 1.00 29.59 C \ ATOM 2131 CG LYS L 10 30.899 18.826 20.283 1.00 32.75 C \ ATOM 2132 CD LYS L 10 31.008 17.707 21.293 1.00 40.24 C \ ATOM 2133 CE LYS L 10 32.399 17.158 21.449 1.00 46.81 C \ ATOM 2134 NZ LYS L 10 33.189 18.003 22.361 1.00 54.71 N \ ATOM 2135 N SER L 11 31.004 19.127 15.460 1.00 27.09 N \ ATOM 2136 CA SER L 11 31.675 18.739 14.211 1.00 28.83 C \ ATOM 2137 C SER L 11 32.658 17.603 14.329 1.00 30.02 C \ ATOM 2138 O SER L 11 33.716 17.656 13.725 1.00 33.25 O \ ATOM 2139 CB SER L 11 32.333 19.969 13.542 1.00 29.29 C \ ATOM 2140 OG SER L 11 32.469 19.697 12.175 1.00 33.47 O \ ATOM 2141 N LEU L 12 32.288 16.517 15.035 1.00 26.86 N \ ATOM 2142 CA LEU L 12 33.127 15.334 15.110 1.00 27.63 C \ ATOM 2143 C LEU L 12 32.398 14.217 14.361 1.00 29.13 C \ ATOM 2144 O LEU L 12 31.162 14.165 14.416 1.00 23.97 O \ ATOM 2145 CB LEU L 12 33.321 14.929 16.580 1.00 30.80 C \ ATOM 2146 CG LEU L 12 34.232 15.834 17.439 1.00 33.53 C \ ATOM 2147 CD1 LEU L 12 34.320 15.309 18.861 1.00 32.09 C \ ATOM 2148 CD2 LEU L 12 35.622 15.940 16.784 1.00 33.79 C \ ATOM 2149 N GLU L 13 33.164 13.382 13.659 1.00 26.90 N \ ATOM 2150 CA GLU L 13 32.609 12.254 12.946 1.00 28.07 C \ ATOM 2151 C GLU L 13 32.718 11.052 13.771 1.00 24.99 C \ ATOM 2152 O GLU L 13 33.772 10.871 14.400 1.00 24.71 O \ ATOM 2153 CB GLU L 13 33.365 11.946 11.672 1.00 28.20 C \ ATOM 2154 CG GLU L 13 33.210 12.987 10.593 1.00 36.75 C \ ATOM 2155 CD GLU L 13 33.676 12.450 9.213 1.00 41.25 C \ ATOM 2156 OE1 GLU L 13 34.188 11.285 9.127 1.00 39.61 O \ ATOM 2157 OE2 GLU L 13 33.471 13.184 8.222 1.00 43.98 O \ ATOM 2158 N ASP L 14 31.700 10.159 13.722 1.00 22.05 N \ ATOM 2159 CA ASP L 14 31.897 8.817 14.270 1.00 20.56 C \ ATOM 2160 C ASP L 14 32.742 7.924 13.343 1.00 21.78 C \ ATOM 2161 O ASP L 14 33.004 8.259 12.179 1.00 21.44 O \ ATOM 2162 CB ASP L 14 30.553 8.167 14.720 1.00 19.85 C \ ATOM 2163 CG ASP L 14 29.701 7.678 13.569 1.00 19.47 C \ ATOM 2164 OD1 ASP L 14 30.147 6.878 12.727 1.00 19.70 O \ ATOM 2165 OD2 ASP L 14 28.541 8.067 13.538 1.00 20.21 O \ ATOM 2166 N LYS L 14A 33.151 6.769 13.849 1.00 23.87 N \ ATOM 2167 CA LYS L 14A 34.125 5.917 13.132 1.00 27.03 C \ ATOM 2168 C LYS L 14A 33.677 5.247 11.837 1.00 29.18 C \ ATOM 2169 O LYS L 14A 34.519 4.880 11.035 1.00 29.14 O \ ATOM 2170 CB LYS L 14A 34.772 4.907 14.102 1.00 33.70 C \ ATOM 2171 CG LYS L 14A 35.627 5.642 15.146 1.00 37.95 C \ ATOM 2172 CD LYS L 14A 36.417 4.781 16.106 1.00 43.13 C \ ATOM 2173 CE LYS L 14A 35.521 3.972 17.022 1.00 49.36 C \ ATOM 2174 NZ LYS L 14A 36.170 3.768 18.350 1.00 51.58 N \ ATOM 2175 N THR L 14B 32.370 5.122 11.591 1.00 29.25 N \ ATOM 2176 CA THR L 14B 31.874 4.461 10.379 1.00 25.44 C \ ATOM 2177 C THR L 14B 30.817 5.262 9.607 1.00 23.78 C \ ATOM 2178 O THR L 14B 30.294 4.771 8.610 1.00 25.40 O \ ATOM 2179 CB THR L 14B 31.338 3.047 10.678 1.00 29.91 C \ ATOM 2180 OG1 THR L 14B 30.145 3.104 11.452 1.00 26.98 O \ ATOM 2181 CG2 THR L 14B 32.385 2.187 11.413 1.00 32.58 C \ ATOM 2182 N GLU L 14C 30.525 6.508 10.002 1.00 21.88 N \ ATOM 2183 CA GLU L 14C 29.535 7.257 9.247 1.00 23.22 C \ ATOM 2184 C GLU L 14C 29.934 7.499 7.787 1.00 25.48 C \ ATOM 2185 O GLU L 14C 29.066 7.618 6.928 1.00 23.30 O \ ATOM 2186 CB GLU L 14C 29.142 8.540 9.943 1.00 24.85 C \ ATOM 2187 CG GLU L 14C 30.226 9.616 10.043 1.00 24.90 C \ ATOM 2188 CD GLU L 14C 29.678 10.884 10.622 1.00 25.22 C \ ATOM 2189 OE1 GLU L 14C 29.706 11.011 11.858 1.00 27.34 O \ ATOM 2190 OE2 GLU L 14C 29.209 11.779 9.866 1.00 24.34 O \ ATOM 2191 N ARG L 14D 31.236 7.660 7.539 1.00 27.98 N \ ATOM 2192 CA ARG L 14D 31.774 7.725 6.161 1.00 31.93 C \ ATOM 2193 C ARG L 14D 31.287 6.599 5.255 1.00 28.27 C \ ATOM 2194 O ARG L 14D 31.099 6.844 4.084 1.00 30.92 O \ ATOM 2195 CB ARG L 14D 33.315 7.763 6.099 1.00 38.50 C \ ATOM 2196 CG ARG L 14D 34.031 7.299 7.373 1.00 46.73 C \ ATOM 2197 CD ARG L 14D 35.143 6.270 7.273 1.00 50.45 C \ ATOM 2198 NE ARG L 14D 34.671 4.957 7.716 1.00 49.90 N \ ATOM 2199 CZ ARG L 14D 34.427 3.907 6.936 1.00 53.45 C \ ATOM 2200 NH1 ARG L 14D 34.591 3.957 5.607 1.00 57.56 N \ ATOM 2201 NH2 ARG L 14D 34.012 2.773 7.503 1.00 60.01 N \ ATOM 2202 N GLU L 14E 31.144 5.381 5.792 1.00 25.29 N \ ATOM 2203 CA GLU L 14E 30.686 4.245 5.028 1.00 25.35 C \ ATOM 2204 C GLU L 14E 29.280 4.475 4.479 1.00 24.31 C \ ATOM 2205 O GLU L 14E 29.045 4.208 3.288 1.00 23.77 O \ ATOM 2206 CB GLU L 14E 30.712 2.977 5.859 1.00 26.46 C \ ATOM 2207 CG GLU L 14E 30.280 1.772 5.071 1.00 26.70 C \ ATOM 2208 CD GLU L 14E 30.054 0.564 5.946 1.00 26.01 C \ ATOM 2209 OE1 GLU L 14E 30.375 0.611 7.138 1.00 26.50 O \ ATOM 2210 OE2 GLU L 14E 29.553 -0.443 5.421 1.00 28.18 O \ ATOM 2211 N LEU L 14F 28.386 5.047 5.292 1.00 20.83 N \ ATOM 2212 CA LEU L 14F 27.067 5.487 4.771 1.00 20.66 C \ ATOM 2213 C LEU L 14F 27.126 6.538 3.698 1.00 19.37 C \ ATOM 2214 O LEU L 14F 26.533 6.397 2.646 1.00 20.21 O \ ATOM 2215 CB LEU L 14F 26.172 6.065 5.891 1.00 21.75 C \ ATOM 2216 CG LEU L 14F 26.096 5.222 7.146 1.00 23.20 C \ ATOM 2217 CD1 LEU L 14F 25.228 5.976 8.139 1.00 24.19 C \ ATOM 2218 CD2 LEU L 14F 25.639 3.821 6.867 1.00 25.58 C \ ATOM 2219 N LEU L 14G 27.830 7.631 3.982 1.00 20.77 N \ ATOM 2220 CA LEU L 14G 27.901 8.760 3.029 1.00 21.83 C \ ATOM 2221 C LEU L 14G 28.544 8.324 1.708 1.00 21.78 C \ ATOM 2222 O LEU L 14G 28.103 8.745 0.649 1.00 23.46 O \ ATOM 2223 CB LEU L 14G 28.564 9.987 3.657 1.00 24.44 C \ ATOM 2224 CG LEU L 14G 27.845 10.568 4.906 1.00 28.82 C \ ATOM 2225 CD1 LEU L 14G 28.789 11.525 5.620 1.00 36.21 C \ ATOM 2226 CD2 LEU L 14G 26.458 11.207 4.697 1.00 27.70 C \ ATOM 2227 N GLU L 14H 29.474 7.389 1.776 1.00 24.39 N \ ATOM 2228 CA GLU L 14H 30.092 6.829 0.571 1.00 28.20 C \ ATOM 2229 C GLU L 14H 29.166 5.967 -0.287 1.00 29.96 C \ ATOM 2230 O GLU L 14H 29.337 5.921 -1.487 1.00 27.64 O \ ATOM 2231 CB GLU L 14H 31.348 6.059 0.958 1.00 30.80 C \ ATOM 2232 CG GLU L 14H 32.495 7.020 1.317 1.00 37.61 C \ ATOM 2233 CD GLU L 14H 33.707 6.339 1.954 1.00 42.86 C \ ATOM 2234 OE1 GLU L 14H 33.667 5.087 2.122 1.00 45.02 O \ ATOM 2235 OE2 GLU L 14H 34.714 7.060 2.262 1.00 46.14 O \ ATOM 2236 N SER L 14I 28.163 5.327 0.330 1.00 24.68 N \ ATOM 2237 CA SER L 14I 27.225 4.450 -0.375 1.00 25.66 C \ ATOM 2238 C SER L 14I 26.280 5.242 -1.246 1.00 27.60 C \ ATOM 2239 O SER L 14I 25.697 4.715 -2.207 1.00 29.26 O \ ATOM 2240 CB SER L 14I 26.438 3.646 0.657 1.00 24.37 C \ ATOM 2241 OG SER L 14I 25.499 4.532 1.303 1.00 23.24 O \ ATOM 2242 N TYR L 14J 26.153 6.536 -0.938 1.00 29.74 N \ ATOM 2243 CA TYR L 14J 25.415 7.435 -1.789 1.00 31.51 C \ ATOM 2244 C TYR L 14J 26.119 7.698 -3.107 1.00 33.64 C \ ATOM 2245 O TYR L 14J 25.447 8.181 -4.008 1.00 46.10 O \ ATOM 2246 CB TYR L 14J 25.211 8.759 -1.129 1.00 35.02 C \ ATOM 2247 CG TYR L 14J 24.426 8.724 0.105 1.00 35.38 C \ ATOM 2248 CD1 TYR L 14J 23.326 7.859 0.237 1.00 36.30 C \ ATOM 2249 CD2 TYR L 14J 24.754 9.538 1.161 1.00 34.14 C \ ATOM 2250 CE1 TYR L 14J 22.610 7.827 1.385 1.00 39.00 C \ ATOM 2251 CE2 TYR L 14J 24.028 9.507 2.320 1.00 30.61 C \ ATOM 2252 CZ TYR L 14J 22.968 8.652 2.430 1.00 36.64 C \ ATOM 2253 OH TYR L 14J 22.200 8.621 3.551 1.00 33.39 O \ TER 2254 TYR L 14J \ TER 2333 TYS I 63 \ HETATM 2525 O HOH L 101 33.425 7.757 9.805 1.00 32.38 O \ HETATM 2526 O HOH L 102 27.500 19.212 22.113 1.00 26.28 O \ HETATM 2527 O HOH L 103 27.651 7.756 -5.162 1.00 54.69 O \ HETATM 2528 O HOH L 104 22.956 6.907 5.316 1.00 21.83 O \ HETATM 2529 O HOH L 105 29.319 13.714 12.649 1.00 19.13 O \ HETATM 2530 O HOH L 106 29.847 2.076 1.845 1.00 28.78 O \ HETATM 2531 O HOH L 107 32.410 12.187 20.525 1.00 30.29 O \ HETATM 2532 O HOH L 108 28.665 21.494 21.015 1.00 39.26 O \ HETATM 2533 O HOH L 109 35.943 13.890 13.409 1.00 36.11 O \ HETATM 2534 O HOH L 110 18.870 23.260 14.661 1.00 41.69 O \ CONECT 222 340 \ CONECT 340 222 \ CONECT 996 2058 \ CONECT 1351 1467 \ CONECT 1467 1351 \ CONECT 1568 1804 \ CONECT 1804 1568 \ CONECT 2058 996 \ CONECT 2310 2317 \ CONECT 2317 2310 2318 \ CONECT 2318 2317 2319 2331 \ CONECT 2319 2318 2320 \ CONECT 2320 2319 2321 2322 \ CONECT 2321 2320 2323 \ CONECT 2322 2320 2324 \ CONECT 2323 2321 2325 \ CONECT 2324 2322 2325 \ CONECT 2325 2323 2324 2326 \ CONECT 2326 2325 2327 \ CONECT 2327 2326 2328 2329 2330 \ CONECT 2328 2327 \ CONECT 2329 2327 \ CONECT 2330 2327 \ CONECT 2331 2318 2332 \ CONECT 2332 2331 \ CONECT 2334 2335 2336 2337 \ CONECT 2335 2334 \ CONECT 2336 2334 \ CONECT 2337 2334 \ CONECT 2338 2339 2340 2341 \ CONECT 2339 2338 \ CONECT 2340 2338 \ CONECT 2341 2338 \ CONECT 2342 2343 2344 2345 \ CONECT 2343 2342 \ CONECT 2344 2342 \ CONECT 2345 2342 \ CONECT 2346 2347 2348 2349 \ CONECT 2347 2346 \ CONECT 2348 2346 \ CONECT 2349 2346 \ CONECT 2350 2351 2352 2353 \ CONECT 2351 2350 \ CONECT 2352 2350 \ CONECT 2353 2350 \ CONECT 2354 2355 2356 2357 \ CONECT 2355 2354 \ CONECT 2356 2354 \ CONECT 2357 2354 \ CONECT 2358 2359 \ CONECT 2359 2358 2360 2361 \ CONECT 2360 2359 2363 \ CONECT 2361 2359 2362 \ CONECT 2362 2361 2363 \ CONECT 2363 2360 2362 2364 \ CONECT 2364 2363 2365 2367 \ CONECT 2365 2364 2366 \ CONECT 2366 2365 2368 \ CONECT 2367 2364 2368 \ CONECT 2368 2366 2367 2369 \ CONECT 2369 2368 2370 \ CONECT 2370 2369 2371 \ CONECT 2371 2370 2372 2375 \ CONECT 2372 2371 2373 \ CONECT 2373 2372 2374 \ CONECT 2374 2373 2388 \ CONECT 2375 2371 2376 2388 \ CONECT 2376 2375 2377 \ CONECT 2377 2376 2378 2387 \ CONECT 2378 2377 2379 2386 \ CONECT 2379 2378 2380 \ CONECT 2380 2379 2381 \ CONECT 2381 2380 2382 2385 \ CONECT 2382 2381 2383 2384 \ CONECT 2383 2382 \ CONECT 2384 2382 \ CONECT 2385 2381 2386 \ CONECT 2386 2378 2385 \ CONECT 2387 2377 \ CONECT 2388 2374 2375 2389 \ CONECT 2389 2388 2390 \ CONECT 2390 2389 2391 \ CONECT 2391 2390 2392 \ CONECT 2392 2391 2393 \ CONECT 2393 2392 2394 \ CONECT 2394 2393 2395 2396 \ CONECT 2395 2394 2411 \ CONECT 2396 2394 2397 2401 \ CONECT 2397 2396 2398 \ CONECT 2398 2397 2399 2400 \ CONECT 2399 2398 \ CONECT 2400 2398 \ CONECT 2401 2396 2402 2406 \ CONECT 2402 2401 2403 \ CONECT 2403 2402 2404 2405 \ CONECT 2404 2403 \ CONECT 2405 2403 \ CONECT 2406 2401 2407 2411 \ CONECT 2407 2406 2408 \ CONECT 2408 2407 2409 2410 \ CONECT 2409 2408 \ CONECT 2410 2408 \ CONECT 2411 2395 2406 2412 \ CONECT 2412 2411 2413 \ CONECT 2413 2412 2414 \ CONECT 2414 2413 2415 2416 \ CONECT 2415 2414 \ CONECT 2416 2414 \ MASTER 401 0 8 8 16 0 13 6 2518 3 108 24 \ END \ """, "6eo9chainL") cmd.hide("all") cmd.color('grey70', "6eo9chainL") cmd.show('cartoon', "6eo9chainL") cmd.center("6eo9chainL", state=0, origin=1) cmd.zoom("6eo9chainL", animate=-1) cmd.select("e6eo9L1", "c. L & i. 1B-14J") cmd.color("red", "e6eo9L1") cmd.disable("e6eo9L1")