cmd.read_pdbstr("""\ HEADER HYDROLASE 13-APR-22 7ZKO \ TITLE X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A \ TITLE 2 PSEUDO-CYCLIC THROMBIN BINDING APTAMER (TBA-NNP/DDP) - CRYSTAL FORM \ TITLE 3 DELTA \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; \ COMPND 3 CHAIN: L; \ COMPND 4 EC: 3.4.21.5; \ COMPND 5 MOL_ID: 2; \ COMPND 6 MOLECULE: THROMBIN HEAVY CHAIN; \ COMPND 7 CHAIN: H; \ COMPND 8 EC: 3.4.21.5; \ COMPND 9 MOL_ID: 3; \ COMPND 10 MOLECULE: TBA-NNP/DDP; \ COMPND 11 CHAIN: A, B; \ COMPND 12 ENGINEERED: YES; \ COMPND 13 OTHER_DETAILS: THE CORRECT SEQUENCE ALIGNMENT FOR CHAIN A IS: ------- \ COMPND 14 -10----- GGTTGGTGTGGTTGG ||||||--||||||| GGTTGG..TGGTTGG THE CORRECT \ COMPND 15 SEQUENCE ALIGNMENT FOR CHAIN B IS: --------10----- GGTTGGTGTGGTTGG - \ COMPND 16 ||||-----||||- .GTTG.....GTTG. \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 3 ORGANISM_COMMON: HUMAN; \ SOURCE 4 ORGANISM_TAXID: 9606; \ SOURCE 5 MOL_ID: 2; \ SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; \ SOURCE 7 ORGANISM_COMMON: HUMAN; \ SOURCE 8 ORGANISM_TAXID: 9606; \ SOURCE 9 MOL_ID: 3; \ SOURCE 10 SYNTHETIC: YES; \ SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; \ SOURCE 12 ORGANISM_TAXID: 32630 \ KEYWDS THROMBIN, APTAMER, COMPLEX, INHIBITOR, COAGULATION, HYDROLASE \ EXPDTA X-RAY DIFFRACTION \ AUTHOR R.TROISI,F.SICA \ REVDAT 5 16-OCT-24 7ZKO 1 REMARK \ REVDAT 4 31-JAN-24 7ZKO 1 JRNL \ REVDAT 3 14-DEC-22 7ZKO 1 JRNL \ REVDAT 2 07-DEC-22 7ZKO 1 JRNL \ REVDAT 1 30-NOV-22 7ZKO 0 \ JRNL AUTH R.TROISI,C.RICCARDI,K.PEREZ DE CARVASAL,M.SMIETANA,F.MORVAN, \ JRNL AUTH 2 P.DEL VECCHIO,D.MONTESARCHIO,F.SICA \ JRNL TITL A TERMINAL FUNCTIONALIZATION STRATEGY REVEALS UNUSUAL \ JRNL TITL 2 BINDING ABILITIES OF ANTI-THROMBIN ANTICOAGULANT APTAMERS. \ JRNL REF MOL THER NUCLEIC ACIDS V. 30 585 2022 \ JRNL REFN ESSN 2162-2531 \ JRNL PMID 36457701 \ JRNL DOI 10.1016/J.OMTN.2022.11.007 \ REMARK 2 \ REMARK 2 RESOLUTION. 2.50 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : REFMAC 5.8.0267 \ REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, \ REMARK 3 : NICHOLLS,WINN,LONG,VAGIN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.02 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 \ REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 \ REMARK 3 NUMBER OF REFLECTIONS : 16714 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 \ REMARK 3 R VALUE (WORKING SET) : 0.246 \ REMARK 3 FREE R VALUE : 0.295 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 \ REMARK 3 FREE R VALUE TEST SET COUNT : 951 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : NULL \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 \ REMARK 3 REFLECTION IN BIN (WORKING SET) : 1215 \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 \ REMARK 3 BIN R VALUE (WORKING SET) : 0.3590 \ REMARK 3 BIN FREE R VALUE SET COUNT : 76 \ REMARK 3 BIN FREE R VALUE : 0.4220 \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 2240 \ REMARK 3 NUCLEIC ACID ATOMS : 435 \ REMARK 3 HETEROGEN ATOMS : 130 \ REMARK 3 SOLVENT ATOMS : 15 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.89 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : 0.03000 \ REMARK 3 B22 (A**2) : 0.03000 \ REMARK 3 B33 (A**2) : -0.10000 \ REMARK 3 B12 (A**2) : 0.02000 \ REMARK 3 B13 (A**2) : 0.00000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. \ REMARK 3 ESU BASED ON R VALUE (A): 0.450 \ REMARK 3 ESU BASED ON FREE R VALUE (A): 0.309 \ REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.292 \ REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.615 \ REMARK 3 \ REMARK 3 CORRELATION COEFFICIENTS. \ REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 \ REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.872 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT \ REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2925 ; 0.003 ; 0.012 \ REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4048 ; 1.102 ; 1.678 \ REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL \ REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 273 ; 7.367 ; 5.000 \ REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;28.168 ;21.163 \ REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 414 ;18.123 ;15.000 \ REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;15.279 ;15.000 \ REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.094 ; 0.200 \ REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2055 ; 0.005 ; 0.020 \ REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL \ REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT \ REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS STATISTICS \ REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL \ REMARK 3 \ REMARK 3 TLS DETAILS \ REMARK 3 NUMBER OF TLS GROUPS : NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELLING. \ REMARK 3 METHOD USED : MASK \ REMARK 3 PARAMETERS FOR MASK CALCULATION \ REMARK 3 VDW PROBE RADIUS : 1.20 \ REMARK 3 ION PROBE RADIUS : 0.80 \ REMARK 3 SHRINKAGE RADIUS : 0.80 \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY \ REMARK 4 \ REMARK 4 7ZKO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-MAY-22. \ REMARK 100 THE DEPOSITION ID IS D_1292122204. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 10-FEB-21 \ REMARK 200 TEMPERATURE (KELVIN) : 100 \ REMARK 200 PH : 7.0 \ REMARK 200 NUMBER OF CRYSTALS USED : 1 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : ELETTRA \ REMARK 200 BEAMLINE : 11.2C \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : PIXEL \ REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS \ REMARK 200 DATA SCALING SOFTWARE : XSCALE \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17665 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 \ REMARK 200 RESOLUTION RANGE LOW (A) : 49.020 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 \ REMARK 200 DATA REDUNDANCY : 18.80 \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : 39.7000 \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 \ REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : 2.500 \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT \ REMARK 200 SOFTWARE USED: PHASER \ REMARK 200 STARTING MODEL: 1PPB \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 56.90 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 30% W/V, 0.2 M SODIUM \ REMARK 280 MALONATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -Y,X-Y,Z+2/3 \ REMARK 290 3555 -X+Y,-X,Z+1/3 \ REMARK 290 4555 Y,X,-Z \ REMARK 290 5555 X-Y,-Y,-Z+1/3 \ REMARK 290 6555 -X,-X+Y,-Z+2/3 \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.93333 \ REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.96667 \ REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 48.96667 \ REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 \ REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 \ REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 97.93333 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC \ REMARK 350 SOFTWARE USED: PISA \ REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 \ REMARK 350 SURFACE AREA OF THE COMPLEX: 15500 ANGSTROM**2 \ REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A, B \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 THR L -5 \ REMARK 465 PHE L -4 \ REMARK 465 GLY L -3 \ REMARK 465 SER L -2 \ REMARK 465 GLY L -1 \ REMARK 465 GLU L 0 \ REMARK 465 ASP L 15 \ REMARK 465 GLY L 16 \ REMARK 465 ARG L 17 \ REMARK 465 THR H 146A \ REMARK 465 TRP H 146B \ REMARK 465 THR H 146C \ REMARK 465 ALA H 146D \ REMARK 465 ASN H 146E \ REMARK 465 VAL H 146F \ REMARK 465 GLY H 146G \ REMARK 465 LYS H 146H \ REMARK 465 GLY H 246 \ REMARK 465 GLU H 247 \ REMARK 465 DT A 7 \ REMARK 465 DG A 8 \ REMARK 465 DG B 1 \ REMARK 465 DG B 6 \ REMARK 465 DT B 7 \ REMARK 465 DG B 8 \ REMARK 465 DT B 9 \ REMARK 465 DG B 10 \ REMARK 465 DG B 15 \ REMARK 470 \ REMARK 470 MISSING ATOM \ REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; \ REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; \ REMARK 470 I=INSERTION CODE): \ REMARK 470 M RES CSSEQI ATOMS \ REMARK 470 DT A 9 N1 C2 O2 N3 C4 O4 C5 \ REMARK 470 DT A 9 C7 C6 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 DG A 11 C3' - O3' - P ANGL. DEV. = -8.2 DEGREES \ REMARK 500 DG B 2 C3' - O3' - P ANGL. DEV. = -8.2 DEGREES \ REMARK 500 DT B 4 C3' - O3' - P ANGL. DEV. = -7.9 DEGREES \ REMARK 500 DG B 11 C3' - O3' - P ANGL. DEV. = -8.3 DEGREES \ REMARK 500 DT B 12 C3' - O3' - P ANGL. DEV. = -12.4 DEGREES \ REMARK 500 DT B 13 C3' - O3' - P ANGL. DEV. = -12.1 DEGREES \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: TORSION ANGLES \ REMARK 500 \ REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) \ REMARK 500 \ REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- \ REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 \ REMARK 500 \ REMARK 500 M RES CSSEQI PSI PHI \ REMARK 500 PHE L 7 -90.95 -124.94 \ REMARK 500 TYR L 14J 41.26 -78.05 \ REMARK 500 GLU H 18 39.23 70.73 \ REMARK 500 ASP H 60E 51.17 70.44 \ REMARK 500 HIS H 71 -48.74 -141.18 \ REMARK 500 ARG H 93 30.62 -98.39 \ REMARK 500 GLU H 97A -62.58 -103.11 \ REMARK 500 ASN H 98 15.14 -143.95 \ REMARK 500 SER H 115 -165.57 -166.43 \ REMARK 500 GLN H 151 74.38 66.35 \ REMARK 500 LEU H 155 127.79 -35.72 \ REMARK 500 ASP H 186A 71.80 -104.43 \ REMARK 500 GLU H 186B -10.39 -150.40 \ REMARK 500 SER H 214 -63.52 -122.86 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 610 \ REMARK 610 MISSING HETEROATOM \ REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; \ REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; \ REMARK 610 I=INSERTION CODE): \ REMARK 610 M RES C SSEQI \ REMARK 610 JL0 A 101 \ REMARK 620 \ REMARK 620 METAL COORDINATION \ REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 NA H 302 NA \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 ARG H 221 O \ REMARK 620 2 LYS H 224 O 64.0 \ REMARK 620 3 HOH H 401 O 98.5 141.6 \ REMARK 620 4 HOH H 409 O 131.9 67.9 121.5 \ REMARK 620 N 1 2 3 \ REMARK 620 \ REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL \ REMARK 620 K A 103 K \ REMARK 620 N RES CSSEQI ATOM \ REMARK 620 1 DG A 1 O6 \ REMARK 620 2 DG A 2 O6 69.3 \ REMARK 620 3 DG A 5 O6 123.0 66.9 \ REMARK 620 4 DG A 10 O6 133.3 148.1 81.2 \ REMARK 620 5 DG A 11 O6 159.5 105.4 68.7 61.1 \ REMARK 620 6 DG A 14 O6 91.0 66.0 102.4 124.8 69.2 \ REMARK 620 7 DG A 15 O6 80.6 126.2 156.1 83.9 87.8 71.3 \ REMARK 620 N 1 2 3 4 5 6 \ REMARK 630 \ REMARK 630 MOLECULE TYPE: NULL \ REMARK 630 MOLECULE NAME: D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL] \ REMARK 630 AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE \ REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 630 \ REMARK 630 M RES C SSSEQI \ REMARK 630 0G6 H 301 \ REMARK 630 SOURCE: NULL \ REMARK 630 TAXONOMY: NULL \ REMARK 630 SUBCOMP: DPN PRO AR7 0QE \ REMARK 630 DETAILS: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 7ZKL RELATED DB: PDB \ REMARK 900 SAME PROTEIN:DNA COMPLEX IN A DIFFERENT CRYSTAL FORM \ REMARK 900 RELATED ID: 7ZKM RELATED DB: PDB \ REMARK 900 SAME PROTEIN:DNA COMPLEX IN A DIFFERENT CRYSTAL FORM \ REMARK 900 RELATED ID: 7ZKN RELATED DB: PDB \ REMARK 900 SAME PROTEIN:DNA COMPLEX IN A DIFFERENT CRYSTAL FORM \ DBREF 7ZKO L -5 17 UNP P00734 THRB_HUMAN 328 363 \ DBREF 7ZKO H 16 247 UNP P00734 THRB_HUMAN 364 622 \ DBREF 7ZKO A 1 15 PDB 7ZKO 7ZKO 1 15 \ DBREF 7ZKO B 1 15 PDB 7ZKO 7ZKO 1 15 \ SEQRES 1 L 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO \ SEQRES 2 L 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG \ SEQRES 3 L 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG \ SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO \ SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU \ SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU \ SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS \ SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS \ SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE \ SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN \ SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS \ SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO \ SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU \ SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN \ SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN \ SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU \ SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR \ SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY \ SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO \ SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN \ SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP \ SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS \ SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU \ SEQRES 1 A 15 DG DG DT DT DG DG DT DG DT DG DG DT DT \ SEQRES 2 A 15 DG DG \ SEQRES 1 B 15 DG DG DT DT DG DG DT DG DT DG DG DT DT \ SEQRES 2 B 15 DG DG \ HET 0G6 H 301 30 \ HET NA H 302 1 \ HET JL0 A 101 56 \ HET JKR A 102 42 \ HET K A 103 1 \ HETNAM 0G6 D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO) \ HETNAM 2 0G6 METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L- \ HETNAM 3 0G6 PROLINAMIDE \ HETNAM NA SODIUM ION \ HETNAM JL0 3-[13-METHYL-5,7,12,14-TETRAKIS(OXIDANYLIDENE)-6,13- \ HETNAM 2 JL0 DIAZATETRACYCLO[6.6.2.0^{4,16}.0^{11,15}]HEXADECA- \ HETNAM 3 JL0 1(15),2,4(16),8,10-PENTAEN-6-YL]PROPYL 3-[5,7,12,14- \ HETNAM 4 JL0 TETRAKIS(OXIDANYLIDENE)-13-(3-OXIDANYLPROPYL)-6,13- \ HETNAM 5 JL0 DIAZATETRACYCLO[6.6.2.0^{4,16}.0^{11,15}]HEXADECA-1,3, \ HETNAM 6 JL0 8(16),9,11(15)-PENTAEN-6-YL]PROPYL HYDROGEN PHOSPHATE \ HETNAM JKR 3-[5-[3-BIS(OXIDANYL)PHOSPHANYLOXYPROPOXY]NAPHTHALEN-1- \ HETNAM 2 JKR YL]OXYPROPYL 3-(5-OXIDANYLNAPHTHALEN-1-YL)OXYPROPYL \ HETNAM 3 JKR HYDROGEN PHOSPHATE \ HETNAM K POTASSIUM ION \ HETSYN 0G6 PPACK \ FORMUL 5 0G6 C21 H34 CL N6 O3 1+ \ FORMUL 6 NA NA 1+ \ FORMUL 7 JL0 C43 H43 N4 O21 P3 \ FORMUL 8 JKR C29 H34 O11 P2 \ FORMUL 9 K K 1+ \ FORMUL 10 HOH *15(H2 O) \ HELIX 1 AA1 PHE L 7 SER L 11 5 5 \ HELIX 2 AA2 THR L 14B TYR L 14J 1 9 \ HELIX 3 AA3 ALA H 55 LEU H 59 1 5 \ HELIX 4 AA4 PRO H 60B ASP H 60E 5 4 \ HELIX 5 AA5 THR H 60I ASN H 62 5 3 \ HELIX 6 AA6 ASP H 125 LEU H 130 1 9 \ HELIX 7 AA7 GLU H 164 ASP H 170 1 7 \ HELIX 8 AA8 LEU H 234 PHE H 245 1 12 \ SHEET 1 AA1 7 SER H 20 ASP H 21 0 \ SHEET 2 AA1 7 GLN H 156 PRO H 161 -1 O VAL H 157 N SER H 20 \ SHEET 3 AA1 7 LYS H 135 GLY H 140 -1 N VAL H 138 O VAL H 158 \ SHEET 4 AA1 7 PRO H 198 LYS H 202 -1 O VAL H 200 N ARG H 137 \ SHEET 5 AA1 7 TRP H 207 TRP H 215 -1 O TYR H 208 N MET H 201 \ SHEET 6 AA1 7 GLY H 226 HIS H 230 -1 O PHE H 227 N TRP H 215 \ SHEET 7 AA1 7 MET H 180 ALA H 183 -1 N PHE H 181 O TYR H 228 \ SHEET 1 AA2 7 GLN H 30 ARG H 35 0 \ SHEET 2 AA2 7 GLU H 39 LEU H 46 -1 O LEU H 41 N LEU H 33 \ SHEET 3 AA2 7 TRP H 51 THR H 54 -1 O LEU H 53 N SER H 45 \ SHEET 4 AA2 7 ALA H 104 LEU H 108 -1 O ALA H 104 N THR H 54 \ SHEET 5 AA2 7 LYS H 81 ILE H 90 -1 N GLU H 86 O LYS H 107 \ SHEET 6 AA2 7 LEU H 64 ILE H 68 -1 N ILE H 68 O LYS H 81 \ SHEET 7 AA2 7 GLN H 30 ARG H 35 -1 N PHE H 34 O LEU H 65 \ SHEET 1 AA3 2 LEU H 60 TYR H 60A 0 \ SHEET 2 AA3 2 LYS H 60F ASN H 60G-1 O LYS H 60F N TYR H 60A \ SSBOND 1 CYS L 1 CYS H 122 1555 1555 2.04 \ SSBOND 2 CYS H 42 CYS H 58 1555 1555 2.05 \ SSBOND 3 CYS H 168 CYS H 182 1555 1555 2.04 \ SSBOND 4 CYS H 191 CYS H 220 1555 1555 2.02 \ LINK NE2 HIS H 57 C3 0G6 H 301 1555 1555 1.47 \ LINK OG SER H 195 C2 0G6 H 301 1555 1555 1.43 \ LINK P DG A 1 O18 JL0 A 101 1555 1555 1.61 \ LINK O3' DG A 15 P1 JKR A 102 1555 1555 1.61 \ LINK O ARG H 221 NA NA H 302 1555 1555 2.92 \ LINK O LYS H 224 NA NA H 302 1555 1555 2.78 \ LINK NA NA H 302 O HOH H 401 1555 1555 2.42 \ LINK NA NA H 302 O HOH H 409 1555 1555 2.24 \ LINK O6 DG A 1 K K A 103 1555 1555 2.72 \ LINK O6 DG A 2 K K A 103 1555 1555 3.03 \ LINK O6 DG A 5 K K A 103 1555 1555 2.85 \ LINK O6 DG A 10 K K A 103 1555 1555 2.87 \ LINK O6 DG A 11 K K A 103 1555 1555 2.93 \ LINK O6 DG A 14 K K A 103 1555 1555 2.93 \ LINK O6 DG A 15 K K A 103 1555 1555 2.92 \ CISPEP 1 SER H 36A PRO H 37 0 -0.36 \ CRYST1 75.870 75.870 146.900 90.00 90.00 120.00 P 32 2 1 12 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.013180 0.007610 0.000000 0.00000 \ SCALE2 0.000000 0.015219 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.006807 0.00000 \ ATOM 1 N ALA L 1B -24.002 13.132 7.228 1.00 90.35 N \ ATOM 2 CA ALA L 1B -25.179 13.900 6.711 1.00 94.05 C \ ATOM 3 C ALA L 1B -26.173 14.146 7.846 1.00 94.92 C \ ATOM 4 O ALA L 1B -27.242 14.716 7.637 1.00 83.42 O \ ATOM 5 CB ALA L 1B -25.811 13.173 5.546 1.00 86.76 C \ ATOM 6 N ASP L 1A -25.792 13.727 9.057 1.00 99.73 N \ ATOM 7 CA ASP L 1A -26.602 13.948 10.244 1.00101.07 C \ ATOM 8 C ASP L 1A -26.036 15.122 11.050 1.00 98.04 C \ ATOM 9 O ASP L 1A -26.594 15.495 12.084 1.00 96.01 O \ ATOM 10 CB ASP L 1A -26.726 12.652 11.052 1.00109.31 C \ ATOM 11 CG ASP L 1A -27.776 12.696 12.151 1.00119.03 C \ ATOM 12 OD1 ASP L 1A -28.760 13.452 11.996 1.00120.79 O \ ATOM 13 OD2 ASP L 1A -27.599 11.973 13.156 1.00120.17 O \ ATOM 14 N CYS L 1 -24.946 15.725 10.550 1.00 85.79 N \ ATOM 15 CA CYS L 1 -24.178 16.697 11.313 1.00 81.02 C \ ATOM 16 C CYS L 1 -25.033 17.911 11.661 1.00 81.77 C \ ATOM 17 O CYS L 1 -25.889 18.310 10.878 1.00 77.53 O \ ATOM 18 CB CYS L 1 -22.920 17.152 10.576 1.00 78.70 C \ ATOM 19 SG CYS L 1 -23.211 18.120 9.069 1.00 78.70 S \ ATOM 20 N GLY L 2 -24.772 18.490 12.841 1.00 78.77 N \ ATOM 21 CA GLY L 2 -25.189 19.849 13.150 1.00 75.39 C \ ATOM 22 C GLY L 2 -26.622 19.940 13.668 1.00 72.07 C \ ATOM 23 O GLY L 2 -27.139 21.046 13.838 1.00 71.77 O \ ATOM 24 N LEU L 3 -27.248 18.775 13.898 1.00 68.06 N \ ATOM 25 CA LEU L 3 -28.545 18.709 14.559 1.00 69.01 C \ ATOM 26 C LEU L 3 -28.371 18.049 15.922 1.00 68.25 C \ ATOM 27 O LEU L 3 -27.944 16.893 16.002 1.00 72.71 O \ ATOM 28 CB LEU L 3 -29.539 17.916 13.700 1.00 70.70 C \ ATOM 29 CG LEU L 3 -29.743 18.414 12.268 1.00 71.78 C \ ATOM 30 CD1 LEU L 3 -30.720 17.515 11.531 1.00 72.17 C \ ATOM 31 CD2 LEU L 3 -30.213 19.861 12.243 1.00 61.41 C \ ATOM 32 N ARG L 4 -28.718 18.794 16.980 1.00 59.55 N \ ATOM 33 CA ARG L 4 -28.469 18.348 18.341 1.00 57.88 C \ ATOM 34 C ARG L 4 -29.587 17.423 18.812 1.00 64.18 C \ ATOM 35 O ARG L 4 -30.746 17.826 18.886 1.00 77.57 O \ ATOM 36 CB ARG L 4 -28.372 19.546 19.286 1.00 55.57 C \ ATOM 37 CG ARG L 4 -27.215 20.486 18.989 1.00 53.11 C \ ATOM 38 CD ARG L 4 -27.288 21.648 19.955 1.00 57.26 C \ ATOM 39 NE ARG L 4 -28.358 22.552 19.580 1.00 57.51 N \ ATOM 40 CZ ARG L 4 -28.519 23.772 20.065 1.00 62.97 C \ ATOM 41 NH1 ARG L 4 -27.679 24.247 20.972 1.00 58.22 N \ ATOM 42 NH2 ARG L 4 -29.523 24.513 19.633 1.00 62.03 N \ ATOM 43 N PRO L 5 -29.262 16.159 19.163 1.00 68.58 N \ ATOM 44 CA PRO L 5 -30.235 15.215 19.721 1.00 69.10 C \ ATOM 45 C PRO L 5 -31.184 15.720 20.810 1.00 73.21 C \ ATOM 46 O PRO L 5 -32.329 15.277 20.878 1.00 75.58 O \ ATOM 47 CB PRO L 5 -29.321 14.141 20.313 1.00 68.10 C \ ATOM 48 CG PRO L 5 -28.162 14.106 19.349 1.00 71.56 C \ ATOM 49 CD PRO L 5 -27.927 15.562 19.009 1.00 72.89 C \ ATOM 50 N LEU L 6 -30.708 16.628 21.670 1.00 72.86 N \ ATOM 51 CA LEU L 6 -31.537 17.113 22.762 1.00 71.30 C \ ATOM 52 C LEU L 6 -32.134 18.469 22.413 1.00 71.25 C \ ATOM 53 O LEU L 6 -32.819 19.064 23.240 1.00 78.46 O \ ATOM 54 CB LEU L 6 -30.721 17.231 24.052 1.00 67.89 C \ ATOM 55 CG LEU L 6 -30.172 15.937 24.648 1.00 71.24 C \ ATOM 56 CD1 LEU L 6 -29.665 16.198 26.055 1.00 68.96 C \ ATOM 57 CD2 LEU L 6 -31.213 14.823 24.646 1.00 73.25 C \ ATOM 58 N PHE L 7 -31.853 18.970 21.209 1.00 70.80 N \ ATOM 59 CA PHE L 7 -32.367 20.285 20.861 1.00 68.55 C \ ATOM 60 C PHE L 7 -33.173 20.216 19.562 1.00 73.37 C \ ATOM 61 O PHE L 7 -34.364 19.927 19.612 1.00 72.56 O \ ATOM 62 CB PHE L 7 -31.274 21.345 20.999 1.00 66.35 C \ ATOM 63 CG PHE L 7 -30.905 21.664 22.428 1.00 66.06 C \ ATOM 64 CD1 PHE L 7 -29.982 20.888 23.118 1.00 65.01 C \ ATOM 65 CD2 PHE L 7 -31.473 22.749 23.086 1.00 66.84 C \ ATOM 66 CE1 PHE L 7 -29.638 21.181 24.432 1.00 60.92 C \ ATOM 67 CE2 PHE L 7 -31.129 23.044 24.400 1.00 64.14 C \ ATOM 68 CZ PHE L 7 -30.216 22.257 25.071 1.00 63.34 C \ ATOM 69 N GLU L 8 -32.516 20.428 18.413 1.00 73.90 N \ ATOM 70 CA GLU L 8 -33.188 20.482 17.121 1.00 68.67 C \ ATOM 71 C GLU L 8 -34.013 19.215 16.898 1.00 70.84 C \ ATOM 72 O GLU L 8 -35.175 19.302 16.510 1.00 76.54 O \ ATOM 73 CB GLU L 8 -32.191 20.693 15.975 1.00 70.55 C \ ATOM 74 CG GLU L 8 -31.605 22.097 15.884 1.00 63.85 C \ ATOM 75 CD GLU L 8 -30.469 22.412 16.845 1.00 65.51 C \ ATOM 76 OE1 GLU L 8 -29.920 21.465 17.447 1.00 64.72 O \ ATOM 77 OE2 GLU L 8 -30.138 23.605 16.994 1.00 59.98 O \ ATOM 78 N LYS L 9 -33.413 18.049 17.174 1.00 71.92 N \ ATOM 79 CA LYS L 9 -34.038 16.747 16.979 1.00 76.02 C \ ATOM 80 C LYS L 9 -35.279 16.565 17.858 1.00 83.05 C \ ATOM 81 O LYS L 9 -35.940 15.532 17.771 1.00 82.20 O \ ATOM 82 CB LYS L 9 -33.051 15.621 17.305 1.00 78.44 C \ ATOM 83 CG LYS L 9 -32.033 15.281 16.224 1.00 81.09 C \ ATOM 84 CD LYS L 9 -31.591 13.828 16.288 1.00 90.09 C \ ATOM 85 CE LYS L 9 -30.347 13.515 15.481 1.00 92.43 C \ ATOM 86 NZ LYS L 9 -30.439 14.026 14.092 1.00 95.84 N \ ATOM 87 N LYS L 10 -35.584 17.553 18.712 1.00 83.80 N \ ATOM 88 CA LYS L 10 -36.713 17.462 19.627 1.00 82.30 C \ ATOM 89 C LYS L 10 -37.503 18.769 19.640 1.00 82.18 C \ ATOM 90 O LYS L 10 -38.386 18.945 20.475 1.00 91.34 O \ ATOM 91 CB LYS L 10 -36.245 17.064 21.032 1.00 84.59 C \ ATOM 92 CG LYS L 10 -36.357 15.578 21.356 1.00 85.34 C \ ATOM 93 CD LYS L 10 -35.390 15.075 22.417 1.00 88.46 C \ ATOM 94 CE LYS L 10 -35.721 15.512 23.830 1.00 89.79 C \ ATOM 95 NZ LYS L 10 -34.976 14.716 24.837 1.00 87.84 N \ ATOM 96 N SER L 11 -37.161 19.682 18.723 1.00 78.10 N \ ATOM 97 CA SER L 11 -37.886 20.926 18.503 1.00 84.57 C \ ATOM 98 C SER L 11 -37.805 21.868 19.706 1.00 87.29 C \ ATOM 99 O SER L 11 -38.608 22.795 19.808 1.00 91.98 O \ ATOM 100 CB SER L 11 -39.326 20.667 18.115 1.00 92.80 C \ ATOM 101 OG SER L 11 -39.435 19.561 17.230 1.00 95.41 O \ ATOM 102 N LEU L 12 -36.840 21.636 20.607 1.00 83.81 N \ ATOM 103 CA LEU L 12 -36.568 22.547 21.713 1.00 79.00 C \ ATOM 104 C LEU L 12 -35.403 23.462 21.337 1.00 78.50 C \ ATOM 105 O LEU L 12 -34.521 23.077 20.567 1.00 79.01 O \ ATOM 106 CB LEU L 12 -36.226 21.747 22.976 1.00 79.76 C \ ATOM 107 CG LEU L 12 -37.223 20.666 23.398 1.00 85.80 C \ ATOM 108 CD1 LEU L 12 -36.512 19.498 24.069 1.00 78.64 C \ ATOM 109 CD2 LEU L 12 -38.298 21.230 24.313 1.00 84.45 C \ ATOM 110 N GLU L 13 -35.400 24.668 21.913 1.00 73.87 N \ ATOM 111 CA GLU L 13 -34.348 25.642 21.674 1.00 71.20 C \ ATOM 112 C GLU L 13 -33.600 25.939 22.969 1.00 74.87 C \ ATOM 113 O GLU L 13 -34.199 25.982 24.046 1.00 65.20 O \ ATOM 114 CB GLU L 13 -34.937 26.957 21.174 1.00 69.84 C \ ATOM 115 CG GLU L 13 -35.607 26.835 19.829 1.00 81.08 C \ ATOM 116 CD GLU L 13 -35.912 28.181 19.207 1.00 91.09 C \ ATOM 117 OE1 GLU L 13 -35.691 29.212 19.892 1.00 93.14 O \ ATOM 118 OE2 GLU L 13 -36.355 28.194 18.039 1.00100.97 O \ ATOM 119 N ASP L 14 -32.287 26.180 22.836 1.00 70.50 N \ ATOM 120 CA ASP L 14 -31.468 26.599 23.958 1.00 61.77 C \ ATOM 121 C ASP L 14 -31.730 28.078 24.228 1.00 65.30 C \ ATOM 122 O ASP L 14 -32.271 28.790 23.377 1.00 67.84 O \ ATOM 123 CB ASP L 14 -29.989 26.252 23.746 1.00 62.40 C \ ATOM 124 CG ASP L 14 -29.280 27.106 22.707 1.00 60.37 C \ ATOM 125 OD1 ASP L 14 -29.332 28.365 22.816 1.00 57.99 O \ ATOM 126 OD2 ASP L 14 -28.680 26.505 21.794 1.00 57.86 O \ ATOM 127 N LYS L 14A -31.295 28.529 25.408 1.00 62.31 N \ ATOM 128 CA LYS L 14A -31.681 29.822 25.941 1.00 61.56 C \ ATOM 129 C LYS L 14A -31.179 30.969 25.074 1.00 63.26 C \ ATOM 130 O LYS L 14A -31.680 32.085 25.206 1.00 70.88 O \ ATOM 131 CB LYS L 14A -31.178 29.976 27.377 1.00 65.43 C \ ATOM 132 CG LYS L 14A -31.564 28.833 28.306 1.00 74.14 C \ ATOM 133 CD LYS L 14A -32.607 29.189 29.333 1.00 78.22 C \ ATOM 134 CE LYS L 14A -32.006 29.856 30.551 1.00 79.85 C \ ATOM 135 NZ LYS L 14A -32.880 29.688 31.734 1.00 79.53 N \ ATOM 136 N THR L 14B -30.184 30.723 24.209 1.00 64.04 N \ ATOM 137 CA THR L 14B -29.516 31.871 23.607 1.00 58.63 C \ ATOM 138 C THR L 14B -29.480 31.805 22.081 1.00 56.37 C \ ATOM 139 O THR L 14B -29.176 32.810 21.433 1.00 58.52 O \ ATOM 140 CB THR L 14B -28.146 32.124 24.252 1.00 66.83 C \ ATOM 141 OG1 THR L 14B -27.418 30.893 24.212 1.00 77.35 O \ ATOM 142 CG2 THR L 14B -28.254 32.632 25.675 1.00 55.49 C \ ATOM 143 N GLU L 14C -29.806 30.644 21.499 1.00 51.28 N \ ATOM 144 CA GLU L 14C -29.736 30.527 20.048 1.00 63.44 C \ ATOM 145 C GLU L 14C -30.567 31.610 19.355 1.00 66.54 C \ ATOM 146 O GLU L 14C -30.285 31.961 18.208 1.00 70.88 O \ ATOM 147 CB GLU L 14C -30.087 29.125 19.556 1.00 66.63 C \ ATOM 148 CG GLU L 14C -31.485 28.658 19.913 1.00 66.38 C \ ATOM 149 CD GLU L 14C -31.828 27.395 19.149 1.00 71.61 C \ ATOM 150 OE1 GLU L 14C -32.159 27.508 17.951 1.00 78.44 O \ ATOM 151 OE2 GLU L 14C -31.720 26.302 19.734 1.00 71.53 O \ ATOM 152 N ARG L 14D -31.576 32.147 20.057 1.00 70.32 N \ ATOM 153 CA ARG L 14D -32.429 33.180 19.488 1.00 71.34 C \ ATOM 154 C ARG L 14D -31.594 34.430 19.220 1.00 68.00 C \ ATOM 155 O ARG L 14D -31.839 35.147 18.250 1.00 67.88 O \ ATOM 156 CB ARG L 14D -33.673 33.440 20.351 1.00 73.61 C \ ATOM 157 CG ARG L 14D -34.573 34.567 19.851 1.00 84.20 C \ ATOM 158 CD ARG L 14D -35.546 34.280 18.710 1.00 95.45 C \ ATOM 159 NE ARG L 14D -36.662 33.430 19.122 1.00108.24 N \ ATOM 160 CZ ARG L 14D -37.831 33.862 19.600 1.00108.64 C \ ATOM 161 NH1 ARG L 14D -38.069 35.159 19.715 1.00108.46 N \ ATOM 162 NH2 ARG L 14D -38.763 32.993 19.958 1.00104.49 N \ ATOM 163 N GLU L 14E -30.582 34.660 20.065 1.00 67.36 N \ ATOM 164 CA GLU L 14E -29.684 35.788 19.871 1.00 66.55 C \ ATOM 165 C GLU L 14E -28.966 35.657 18.531 1.00 62.40 C \ ATOM 166 O GLU L 14E -28.723 36.663 17.866 1.00 66.00 O \ ATOM 167 CB GLU L 14E -28.682 35.910 21.018 1.00 70.85 C \ ATOM 168 CG GLU L 14E -27.856 37.182 20.945 1.00 72.79 C \ ATOM 169 CD GLU L 14E -26.900 37.374 22.109 1.00 70.84 C \ ATOM 170 OE1 GLU L 14E -26.597 36.370 22.791 1.00 61.75 O \ ATOM 171 OE2 GLU L 14E -26.484 38.532 22.345 1.00 71.90 O \ ATOM 172 N LEU L 14F -28.655 34.417 18.134 1.00 56.47 N \ ATOM 173 CA LEU L 14F -27.867 34.228 16.931 1.00 61.91 C \ ATOM 174 C LEU L 14F -28.732 34.571 15.726 1.00 66.89 C \ ATOM 175 O LEU L 14F -28.369 35.460 14.957 1.00 66.49 O \ ATOM 176 CB LEU L 14F -27.270 32.815 16.850 1.00 61.94 C \ ATOM 177 CG LEU L 14F -26.387 32.359 18.018 1.00 61.21 C \ ATOM 178 CD1 LEU L 14F -25.641 31.087 17.667 1.00 61.15 C \ ATOM 179 CD2 LEU L 14F -25.396 33.427 18.447 1.00 61.02 C \ ATOM 180 N LEU L 14G -29.888 33.894 15.606 1.00 75.63 N \ ATOM 181 CA LEU L 14G -30.796 34.103 14.483 1.00 74.64 C \ ATOM 182 C LEU L 14G -31.147 35.589 14.374 1.00 70.66 C \ ATOM 183 O LEU L 14G -31.054 36.165 13.296 1.00 69.50 O \ ATOM 184 CB LEU L 14G -32.031 33.199 14.616 1.00 80.91 C \ ATOM 185 CG LEU L 14G -33.265 33.578 13.784 1.00 95.00 C \ ATOM 186 CD1 LEU L 14G -32.974 33.610 12.288 1.00 89.75 C \ ATOM 187 CD2 LEU L 14G -34.442 32.651 14.070 1.00 94.59 C \ ATOM 188 N GLU L 14H -31.481 36.213 15.508 1.00 67.74 N \ ATOM 189 CA GLU L 14H -31.859 37.616 15.558 1.00 72.47 C \ ATOM 190 C GLU L 14H -30.756 38.523 15.016 1.00 77.96 C \ ATOM 191 O GLU L 14H -31.053 39.607 14.531 1.00 84.19 O \ ATOM 192 CB GLU L 14H -32.200 38.022 16.990 1.00 74.16 C \ ATOM 193 CG GLU L 14H -33.472 37.366 17.486 1.00 84.99 C \ ATOM 194 CD GLU L 14H -34.314 38.200 18.433 1.00 88.29 C \ ATOM 195 OE1 GLU L 14H -34.011 39.399 18.581 1.00 85.46 O \ ATOM 196 OE2 GLU L 14H -35.282 37.646 19.007 1.00 99.93 O \ ATOM 197 N SER L 14I -29.489 38.097 15.117 1.00 86.00 N \ ATOM 198 CA SER L 14I -28.372 38.926 14.681 1.00 81.13 C \ ATOM 199 C SER L 14I -28.401 39.086 13.163 1.00 80.22 C \ ATOM 200 O SER L 14I -27.894 40.072 12.636 1.00 76.85 O \ ATOM 201 CB SER L 14I -27.038 38.381 15.149 1.00 85.22 C \ ATOM 202 OG SER L 14I -26.571 37.346 14.287 1.00 72.32 O \ ATOM 203 N TYR L 14J -28.990 38.098 12.476 1.00 83.62 N \ ATOM 204 CA TYR L 14J -29.146 38.140 11.032 1.00 91.79 C \ ATOM 205 C TYR L 14J -30.308 39.051 10.628 1.00 95.70 C \ ATOM 206 O TYR L 14J -31.074 38.696 9.735 1.00103.49 O \ ATOM 207 CB TYR L 14J -29.464 36.750 10.474 1.00 87.49 C \ ATOM 208 CG TYR L 14J -28.560 35.605 10.854 1.00 86.59 C \ ATOM 209 CD1 TYR L 14J -27.195 35.639 10.613 1.00 87.13 C \ ATOM 210 CD2 TYR L 14J -29.094 34.437 11.376 1.00 85.70 C \ ATOM 211 CE1 TYR L 14J -26.377 34.564 10.934 1.00 78.48 C \ ATOM 212 CE2 TYR L 14J -28.295 33.351 11.693 1.00 81.07 C \ ATOM 213 CZ TYR L 14J -26.930 33.413 11.473 1.00 81.65 C \ ATOM 214 OH TYR L 14J -26.148 32.335 11.781 1.00 73.98 O \ ATOM 215 N ILE L 14K -30.449 40.210 11.290 1.00101.81 N \ ATOM 216 CA ILE L 14K -31.391 41.244 10.878 1.00100.17 C \ ATOM 217 C ILE L 14K -30.777 42.623 11.158 1.00102.32 C \ ATOM 218 O ILE L 14K -29.898 43.031 10.371 1.00110.41 O \ ATOM 219 CB ILE L 14K -32.781 41.088 11.541 1.00 98.83 C \ ATOM 220 CG1 ILE L 14K -32.723 41.086 13.073 1.00104.12 C \ ATOM 221 CG2 ILE L 14K -33.530 39.877 10.999 1.00 93.35 C \ ATOM 222 CD1 ILE L 14K -32.763 42.460 13.721 1.00109.58 C \ TER 223 ILE L 14K \ TER 2242 PHE H 245 \ TER 2510 DG A 15 \ TER 2679 DG B 14 \ HETATM 2810 O HOH L 101 -25.188 32.165 14.321 1.00 73.60 O \ CONECT 19 1209 \ CONECT 442 560 \ CONECT 554 2709 \ CONECT 560 442 \ CONECT 1209 19 \ CONECT 1557 1673 \ CONECT 1673 1557 \ CONECT 1774 2007 \ CONECT 1801 2700 \ CONECT 2007 1774 \ CONECT 2019 2710 \ CONECT 2042 2710 \ CONECT 2243 2764 \ CONECT 2259 2809 \ CONECT 2281 2809 \ CONECT 2343 2809 \ CONECT 2398 2809 \ CONECT 2420 2809 \ CONECT 2482 2809 \ CONECT 2496 2774 \ CONECT 2504 2809 \ CONECT 2680 2681 \ CONECT 2681 2680 2682 2684 \ CONECT 2682 2681 2683 2691 \ CONECT 2683 2682 \ CONECT 2684 2681 2685 \ CONECT 2685 2684 2686 2687 \ CONECT 2686 2685 2688 \ CONECT 2687 2685 2689 \ CONECT 2688 2686 2690 \ CONECT 2689 2687 2690 \ CONECT 2690 2688 2689 \ CONECT 2691 2682 2692 2697 \ CONECT 2692 2691 2693 2695 \ CONECT 2693 2692 2694 2698 \ CONECT 2694 2693 \ CONECT 2695 2692 2696 \ CONECT 2696 2695 2697 \ CONECT 2697 2691 2696 \ CONECT 2698 2693 2699 \ CONECT 2699 2698 2700 2702 \ CONECT 2700 1801 2699 2701 2709 \ CONECT 2701 2700 \ CONECT 2702 2699 2703 \ CONECT 2703 2702 2704 \ CONECT 2704 2703 2705 \ CONECT 2705 2704 2706 \ CONECT 2706 2705 2707 2708 \ CONECT 2707 2706 \ CONECT 2708 2706 \ CONECT 2709 554 2700 \ CONECT 2710 2019 2042 2811 2819 \ CONECT 2711 2712 \ CONECT 2712 2711 2713 2760 \ CONECT 2713 2712 2714 2765 \ CONECT 2714 2713 2715 \ CONECT 2715 2714 2716 \ CONECT 2716 2715 2717 2766 \ CONECT 2717 2716 2718 2719 \ CONECT 2718 2717 \ CONECT 2719 2717 2720 2752 \ CONECT 2720 2719 2721 \ CONECT 2721 2720 2722 \ CONECT 2722 2721 2723 \ CONECT 2723 2722 2724 \ CONECT 2724 2723 2725 2726 2727 \ CONECT 2725 2724 \ CONECT 2726 2724 \ CONECT 2727 2724 2728 \ CONECT 2728 2727 2729 \ CONECT 2729 2728 2730 \ CONECT 2730 2729 2731 \ CONECT 2731 2730 2732 2748 \ CONECT 2732 2731 2733 2734 \ CONECT 2733 2732 \ CONECT 2734 2732 2735 2750 \ CONECT 2735 2734 2736 \ CONECT 2736 2735 2737 \ CONECT 2737 2736 2738 2751 \ CONECT 2738 2737 2739 2740 \ CONECT 2739 2738 \ CONECT 2740 2738 2741 2742 \ CONECT 2741 2740 \ CONECT 2742 2740 2743 2744 \ CONECT 2743 2742 \ CONECT 2744 2742 2745 2751 \ CONECT 2745 2744 2746 \ CONECT 2746 2745 2747 \ CONECT 2747 2746 2748 2750 \ CONECT 2748 2731 2747 2749 \ CONECT 2749 2748 \ CONECT 2750 2734 2747 2751 \ CONECT 2751 2737 2744 2750 \ CONECT 2752 2719 2753 2754 \ CONECT 2753 2752 \ CONECT 2754 2752 2755 2766 \ CONECT 2755 2754 2756 \ CONECT 2756 2755 2757 \ CONECT 2757 2756 2758 2765 \ CONECT 2758 2757 2759 2760 \ CONECT 2759 2758 \ CONECT 2760 2712 2758 2761 \ CONECT 2761 2760 2762 \ CONECT 2762 2761 2763 \ CONECT 2763 2762 2764 \ CONECT 2764 2243 2763 \ CONECT 2765 2713 2757 2766 \ CONECT 2766 2716 2754 2765 \ CONECT 2767 2779 2780 2808 \ CONECT 2768 2769 2772 \ CONECT 2769 2768 2779 \ CONECT 2770 2771 2777 \ CONECT 2771 2770 2778 \ CONECT 2772 2768 2778 2808 \ CONECT 2773 2774 \ CONECT 2774 2496 2773 2775 2776 \ CONECT 2775 2774 \ CONECT 2776 2774 2777 \ CONECT 2777 2770 2776 \ CONECT 2778 2771 2772 \ CONECT 2779 2767 2769 \ CONECT 2780 2767 2781 2805 \ CONECT 2781 2780 2782 \ CONECT 2782 2781 2783 \ CONECT 2783 2782 2784 \ CONECT 2784 2783 2785 \ CONECT 2785 2784 2786 \ CONECT 2786 2785 2787 2788 2789 \ CONECT 2787 2786 \ CONECT 2788 2786 \ CONECT 2789 2786 2790 \ CONECT 2790 2789 2791 \ CONECT 2791 2790 2792 \ CONECT 2792 2791 2793 \ CONECT 2793 2792 2794 \ CONECT 2794 2793 2795 2804 \ CONECT 2795 2794 2796 \ CONECT 2796 2795 2797 \ CONECT 2797 2796 2798 \ CONECT 2798 2797 2799 2804 \ CONECT 2799 2798 2800 2801 \ CONECT 2800 2799 \ CONECT 2801 2799 2802 \ CONECT 2802 2801 2803 \ CONECT 2803 2802 2804 \ CONECT 2804 2794 2798 2803 \ CONECT 2805 2780 2806 \ CONECT 2806 2805 2807 \ CONECT 2807 2806 2808 \ CONECT 2808 2767 2772 2807 \ CONECT 2809 2259 2281 2343 2398 \ CONECT 2809 2420 2482 2504 \ CONECT 2811 2710 \ CONECT 2819 2710 \ MASTER 397 0 5 8 16 0 0 6 2820 4 154 27 \ END \ """, "7zkochainL") cmd.hide("all") cmd.color('grey70', "7zkochainL") cmd.show('cartoon', "7zkochainL") cmd.center("7zkochainL", state=0, origin=1) cmd.zoom("7zkochainL", animate=-1) cmd.select("e7zkoL1", "c. L & i. 1B-14K") cmd.color("red", "e7zkoL1") cmd.disable("e7zkoL1")