cmd.read_pdbstr("""\ HEADER RIBOSOME 14-JUL-05 2AAR \ TITLE STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY HOMOLOGOUS \ TITLE 2 COMPLEX WITH EUBACTERIAL RIBOSOME. \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: 23S RIBOSOMAL RNA; \ COMPND 3 CHAIN: 0; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: 50S RIBOSOMAL PROTEIN L23; \ COMPND 6 CHAIN: R; \ COMPND 7 MOL_ID: 3; \ COMPND 8 MOLECULE: 50S RIBOSOMAL PROTEIN L29; \ COMPND 9 CHAIN: W; \ COMPND 10 MOL_ID: 4; \ COMPND 11 MOLECULE: TRIGGER FACTOR; \ COMPND 12 CHAIN: 7; \ COMPND 13 FRAGMENT: N-TERMINAL DOMAIN; \ COMPND 14 SYNONYM: TF \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 3 ORGANISM_TAXID: 1299; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 6 ORGANISM_TAXID: 1299; \ SOURCE 7 MOL_ID: 3; \ SOURCE 8 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 9 ORGANISM_TAXID: 1299; \ SOURCE 10 MOL_ID: 4; \ SOURCE 11 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; \ SOURCE 12 ORGANISM_TAXID: 1299 \ KEYWDS TRIGGER FACTOR, 50S, RIBOSOME, CHEPERONE, TUNNEL \ EXPDTA X-RAY DIFFRACTION \ MDLTYP CA ATOMS ONLY, CHAIN R, W, 7 \ AUTHOR D.BARAM,E.PYETAN,A.SITTNER,T.AUERBACH-NEVO,A.BASHAN,A.YONATH \ REVDAT 5 23-AUG-23 2AAR 1 REMARK \ REVDAT 4 31-JAN-18 2AAR 1 REMARK \ REVDAT 3 24-FEB-09 2AAR 1 VERSN \ REVDAT 2 30-AUG-05 2AAR 1 JRNL \ REVDAT 1 23-AUG-05 2AAR 0 \ JRNL AUTH D.BARAM,E.PYETAN,A.SITTNER,T.AUERBACH-NEVO,A.BASHAN,A.YONATH \ JRNL TITL STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY \ JRNL TITL 2 HOMOLOGOUS COMPLEX WITH EUBACTERIAL RIBOSOME REVEALS ITS \ JRNL TITL 3 CHAPERONE ACTION \ JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 12017 2005 \ JRNL REFN ISSN 0027-8424 \ JRNL PMID 16091460 \ JRNL DOI 10.1073/PNAS.0505581102 \ REMARK 2 \ REMARK 2 RESOLUTION. 3.50 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : CNS 1.1 \ REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- \ REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, \ REMARK 3 : READ,RICE,SIMONSON,WARREN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 \ REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.500 \ REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL \ REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL \ REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 \ REMARK 3 NUMBER OF REFLECTIONS : 270868 \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT \ REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM \ REMARK 3 R VALUE (WORKING SET) : 0.251 \ REMARK 3 FREE R VALUE : 0.320 \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 \ REMARK 3 FREE R VALUE TEST SET COUNT : 13451 \ REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : NULL \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL \ REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL \ REMARK 3 BIN R VALUE (WORKING SET) : NULL \ REMARK 3 BIN FREE R VALUE : NULL \ REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL \ REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 271 \ REMARK 3 NUCLEIC ACID ATOMS : 59359 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 0 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.00 \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : -27.37000 \ REMARK 3 B22 (A**2) : 0.00000 \ REMARK 3 B33 (A**2) : 0.00000 \ REMARK 3 B12 (A**2) : 55.85000 \ REMARK 3 B13 (A**2) : -28.47000 \ REMARK 3 B23 (A**2) : 0.00000 \ REMARK 3 \ REMARK 3 ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.51 \ REMARK 3 ESD FROM SIGMAA (A) : 0.92 \ REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 \ REMARK 3 \ REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.61 \ REMARK 3 ESD FROM C-V SIGMAA (A) : 0.97 \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 BOND LENGTHS (A) : 0.008 \ REMARK 3 BOND ANGLES (DEGREES) : 1.300 \ REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.80 \ REMARK 3 IMPROPER ANGLES (DEGREES) : 1.490 \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA \ REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 KSOL : NULL \ REMARK 3 BSOL : NULL \ REMARK 3 \ REMARK 3 NCS MODEL : NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT \ REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL \ REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 PARAMETER FILE 1 : NULL \ REMARK 3 TOPOLOGY FILE 1 : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: THIS ENTRY CONTAINS C ALPHA ONLY FOR \ REMARK 3 THE PROTEINS. \ REMARK 4 \ REMARK 4 2AAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-05. \ REMARK 100 THE DEPOSITION ID IS D_1000033691. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : 10-APR-05 \ REMARK 200 TEMPERATURE (KELVIN) : NULL \ REMARK 200 PH : 7.8 \ REMARK 200 NUMBER OF CRYSTALS USED : 5 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : APS \ REMARK 200 BEAMLINE : 19-ID \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CCD \ REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : TRUNCATE, HKL-2000 \ REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 294915 \ REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 \ REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : NULL \ REMARK 200 DATA REDUNDANCY : NULL \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : NULL \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS \ REMARK 200 SOFTWARE USED: CCP4 \ REMARK 200 STARTING MODEL: PDB ENTRY 1NKW \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): 64.00 \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.98 \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.8, VAPOR DIFFUSION, HANGING DROP, \ REMARK 280 TEMPERATURE 20K, TEMPERATURE 293.0K \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,-Y,Z \ REMARK 290 3555 -X,Y,-Z \ REMARK 290 4555 X,-Y,-Z \ REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 \ REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 \ REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 \ REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 84.69300 \ REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 203.53150 \ REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 346.37300 \ REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 84.69300 \ REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 203.53150 \ REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 346.37300 \ REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 84.69300 \ REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 203.53150 \ REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 346.37300 \ REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 84.69300 \ REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 203.53150 \ REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 346.37300 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: 0, R, W, 7 \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 A 0 249 \ REMARK 465 C 0 250 \ REMARK 465 C 0 251 \ REMARK 465 G 0 252 \ REMARK 465 A 0 253 \ REMARK 465 A 0 254 \ REMARK 465 A 0 255 \ REMARK 465 C 0 256 \ REMARK 465 G 0 257 \ REMARK 465 C 0 258 \ REMARK 465 U 0 259 \ REMARK 465 U 0 260 \ REMARK 465 G 0 261 \ REMARK 465 C 0 262 \ REMARK 465 G 0 263 \ REMARK 465 U 0 264 \ REMARK 465 U 0 265 \ REMARK 465 U 0 266 \ REMARK 465 C 0 267 \ REMARK 465 G 0 268 \ REMARK 465 G 0 269 \ REMARK 465 G 0 270 \ REMARK 465 G 0 271 \ REMARK 465 U 0 272 \ REMARK 465 U 0 273 \ REMARK 465 G 0 274 \ REMARK 465 U 0 275 \ REMARK 465 A 0 276 \ REMARK 465 G 0 277 \ REMARK 465 G 0 278 \ REMARK 465 A 0 279 \ REMARK 465 C 0 280 \ REMARK 465 C 0 281 \ REMARK 465 A 0 282 \ REMARK 465 G 0 283 \ REMARK 465 U 0 284 \ REMARK 465 U 0 285 \ REMARK 465 U 0 286 \ REMARK 465 U 0 287 \ REMARK 465 U 0 288 \ REMARK 465 A 0 289 \ REMARK 465 A 0 290 \ REMARK 465 G 0 291 \ REMARK 465 C 0 374 \ REMARK 465 U 0 375 \ REMARK 465 G 0 376 \ REMARK 465 G 0 377 \ REMARK 465 C 0 378 \ REMARK 465 A 0 379 \ REMARK 465 C 0 380 \ REMARK 465 C 0 381 \ REMARK 465 U 0 382 \ REMARK 465 G 0 383 \ REMARK 465 A 0 384 \ REMARK 465 G 0 385 \ REMARK 465 U 0 386 \ REMARK 465 G 0 892 \ REMARK 465 G 0 893 \ REMARK 465 G 0 894 \ REMARK 465 G 0 895 \ REMARK 465 G 0 896 \ REMARK 465 C 0 897 \ REMARK 465 C 0 898 \ REMARK 465 U 0 899 \ REMARK 465 A 0 900 \ REMARK 465 C 0 901 \ REMARK 465 C 0 902 \ REMARK 465 A 0 903 \ REMARK 465 G 0 904 \ REMARK 465 C 0 905 \ REMARK 465 U 0 906 \ REMARK 465 U 0 907 \ REMARK 465 A 0 908 \ REMARK 465 C 0 909 \ REMARK 465 C 0 910 \ REMARK 465 G 0 2098 \ REMARK 465 G 0 2099 \ REMARK 465 A 0 2100 \ REMARK 465 U 0 2101 \ REMARK 465 A 0 2102 \ REMARK 465 C 0 2111 \ REMARK 465 C 0 2112 \ REMARK 465 U 0 2113 \ REMARK 465 G 0 2114 \ REMARK 465 C 0 2115 \ REMARK 465 G 0 2116 \ REMARK 465 U 0 2126 \ REMARK 465 U 0 2127 \ REMARK 465 U 0 2128 \ REMARK 465 U 0 2129 \ REMARK 465 G 0 2130 \ REMARK 465 G 0 2131 \ REMARK 465 A 0 2141 \ REMARK 465 G 0 2142 \ REMARK 465 G 0 2143 \ REMARK 465 C 0 2144 \ REMARK 465 A 0 2145 \ REMARK 465 A 0 2146 \ REMARK 465 C 0 2147 \ REMARK 465 G 0 2148 \ REMARK 465 G 0 2149 \ REMARK 465 U 0 2150 \ REMARK 465 G 0 2151 \ REMARK 465 A 0 2152 \ REMARK 465 A 0 2153 \ REMARK 465 A 0 2154 \ REMARK 465 U 0 2155 \ REMARK 465 A 0 2156 \ REMARK 465 U 0 2775 \ REMARK 465 U 0 2776 \ REMARK 465 A 0 2777 \ REMARK 465 C 0 2878 \ REMARK 465 U 0 2879 \ REMARK 465 C 0 2880 \ REMARK 465 MET R 1 \ REMARK 465 ALA R 95 \ REMARK 465 MET W 1 \ REMARK 465 GLN W 67 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 O2' C 0 541 N2 G 0 2018 1.63 \ REMARK 500 OP2 C 0 1002 OP2 G 0 1200 1.93 \ REMARK 500 N3 U 0 1459 O5' G 0 1476 1.98 \ REMARK 500 OP1 A 0 2690 OP2 A 0 2692 2.00 \ REMARK 500 OP2 U 0 845 O6 G 0 955 2.03 \ REMARK 500 O3' C 0 819 N2 G 0 843 2.08 \ REMARK 500 O2' U 0 2501 OP1 U 0 2626 2.10 \ REMARK 500 O4 U 0 1326 N6 A 0 1619 2.12 \ REMARK 500 O2' G 0 623 OP1 A 0 625 2.14 \ REMARK 500 O2' U 0 1301 N2 G 0 1664 2.14 \ REMARK 500 O2' G 0 1279 O6 G 0 1995 2.15 \ REMARK 500 N4 C 0 33 O2' G 0 458 2.16 \ REMARK 500 O2' C 0 646 OP1 U 0 650 2.17 \ REMARK 500 O2' U 0 575 OP2 G 0 822 2.18 \ REMARK 500 N2 G 0 209 OP1 G 0 433 2.19 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION \ REMARK 500 C 0 700 N1 C 0 700 C2 0.101 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: COVALENT BOND ANGLES \ REMARK 500 \ REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES \ REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE \ REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 STANDARD TABLE: \ REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) \ REMARK 500 \ REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 \ REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 \ REMARK 500 \ REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 \ REMARK 500 U 0 118 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES \ REMARK 500 C 0 169 N1 - C1' - C2' ANGL. DEV. = -6.7 DEGREES \ REMARK 500 A 0 172 O4' - C1' - N9 ANGL. DEV. = 5.1 DEGREES \ REMARK 500 A 0 176 N9 - C1' - C2' ANGL. DEV. = 8.1 DEGREES \ REMARK 500 A 0 218 N9 - C1' - C2' ANGL. DEV. = 8.7 DEGREES \ REMARK 500 G 0 334 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES \ REMARK 500 G 0 424 N9 - C1' - C2' ANGL. DEV. = 8.1 DEGREES \ REMARK 500 A 0 468 N9 - C1' - C2' ANGL. DEV. = 9.5 DEGREES \ REMARK 500 G 0 469 N9 - C1' - C2' ANGL. DEV. = 8.8 DEGREES \ REMARK 500 A 0 539 N9 - C1' - C2' ANGL. DEV. = 10.1 DEGREES \ REMARK 500 U 0 571 N1 - C1' - C2' ANGL. DEV. = 8.6 DEGREES \ REMARK 500 G 0 582 N9 - C1' - C2' ANGL. DEV. = 9.6 DEGREES \ REMARK 500 C 0 596 N1 - C1' - C2' ANGL. DEV. = 9.0 DEGREES \ REMARK 500 A 0 698 N9 - C1' - C2' ANGL. DEV. = 8.2 DEGREES \ REMARK 500 C 0 700 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES \ REMARK 500 C 0 700 N1 - C2 - O2 ANGL. DEV. = 3.8 DEGREES \ REMARK 500 G 0 741 N9 - C1' - C2' ANGL. DEV. = 8.7 DEGREES \ REMARK 500 C 0 765 C1' - O4' - C4' ANGL. DEV. = -5.5 DEGREES \ REMARK 500 C 0 765 N1 - C1' - C2' ANGL. DEV. = 8.3 DEGREES \ REMARK 500 C 0 765 O4' - C1' - N1 ANGL. DEV. = 7.2 DEGREES \ REMARK 500 G 0 788 N9 - C1' - C2' ANGL. DEV. = 10.8 DEGREES \ REMARK 500 G 0 789 C5' - C4' - C3' ANGL. DEV. = 10.7 DEGREES \ REMARK 500 A 0 795 C2' - C3' - O3' ANGL. DEV. = -13.4 DEGREES \ REMARK 500 C 0 804 N1 - C1' - C2' ANGL. DEV. = 10.3 DEGREES \ REMARK 500 G 0 818 N9 - C1' - C2' ANGL. DEV. = 8.7 DEGREES \ REMARK 500 A 0 984 N9 - C1' - C2' ANGL. DEV. = 9.2 DEGREES \ REMARK 500 G 0 985 N9 - C1' - C2' ANGL. DEV. = 12.0 DEGREES \ REMARK 500 G 01036 N9 - C1' - C2' ANGL. DEV. = 8.8 DEGREES \ REMARK 500 G 01266 N9 - C1' - C2' ANGL. DEV. = 13.8 DEGREES \ REMARK 500 G 01279 C1' - O4' - C4' ANGL. DEV. = -4.6 DEGREES \ REMARK 500 G 01279 N9 - C1' - C2' ANGL. DEV. = 14.1 DEGREES \ REMARK 500 G 01324 N9 - C1' - C2' ANGL. DEV. = 7.9 DEGREES \ REMARK 500 G 01337 N9 - C1' - C2' ANGL. DEV. = 11.4 DEGREES \ REMARK 500 A 01474 N9 - C1' - C2' ANGL. DEV. = 9.8 DEGREES \ REMARK 500 C 01581 N1 - C1' - C2' ANGL. DEV. = 8.7 DEGREES \ REMARK 500 A 01715 N9 - C1' - C2' ANGL. DEV. = 9.9 DEGREES \ REMARK 500 G 01716 N9 - C1' - C2' ANGL. DEV. = 11.2 DEGREES \ REMARK 500 U 01723 N1 - C1' - C2' ANGL. DEV. = 10.0 DEGREES \ REMARK 500 G 01749 N9 - C1' - C2' ANGL. DEV. = 10.6 DEGREES \ REMARK 500 A 01771 N9 - C1' - C2' ANGL. DEV. = 9.7 DEGREES \ REMARK 500 A 01777 N9 - C1' - C2' ANGL. DEV. = 8.1 DEGREES \ REMARK 500 G 01963 N9 - C1' - C2' ANGL. DEV. = 8.1 DEGREES \ REMARK 500 G 01975 N9 - C1' - C2' ANGL. DEV. = 10.0 DEGREES \ REMARK 500 A 02014 N9 - C1' - C2' ANGL. DEV. = 8.6 DEGREES \ REMARK 500 G 02217 N9 - C1' - C2' ANGL. DEV. = 9.3 DEGREES \ REMARK 500 C 02237 N1 - C1' - C2' ANGL. DEV. = 12.1 DEGREES \ REMARK 500 A 02405 N9 - C1' - C2' ANGL. DEV. = 10.5 DEGREES \ REMARK 500 G 02426 N9 - C1' - C2' ANGL. DEV. = 7.9 DEGREES \ REMARK 500 U 02428 N1 - C1' - C2' ANGL. DEV. = 8.2 DEGREES \ REMARK 500 A 02476 C5' - C4' - O4' ANGL. DEV. = -7.5 DEGREES \ REMARK 500 \ REMARK 500 THIS ENTRY HAS 69 ANGLE DEVIATIONS. \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: PLANAR GROUPS \ REMARK 500 \ REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL \ REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE \ REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN \ REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS \ REMARK 500 AN RMSD GREATER THAN THIS VALUE \ REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; \ REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). \ REMARK 500 \ REMARK 500 M RES CSSEQI RMS TYPE \ REMARK 500 G 0 67 0.06 SIDE CHAIN \ REMARK 500 A 0 71 0.08 SIDE CHAIN \ REMARK 500 U 0 118 0.08 SIDE CHAIN \ REMARK 500 A 0 123 0.06 SIDE CHAIN \ REMARK 500 U 0 154 0.07 SIDE CHAIN \ REMARK 500 G 0 165 0.06 SIDE CHAIN \ REMARK 500 U 0 170 0.10 SIDE CHAIN \ REMARK 500 A 0 172 0.08 SIDE CHAIN \ REMARK 500 U 0 177 0.07 SIDE CHAIN \ REMARK 500 U 0 211 0.11 SIDE CHAIN \ REMARK 500 G 0 219 0.07 SIDE CHAIN \ REMARK 500 U 0 220 0.08 SIDE CHAIN \ REMARK 500 A 0 228 0.05 SIDE CHAIN \ REMARK 500 A 0 404 0.06 SIDE CHAIN \ REMARK 500 U 0 412 0.07 SIDE CHAIN \ REMARK 500 A 0 443 0.08 SIDE CHAIN \ REMARK 500 G 0 469 0.10 SIDE CHAIN \ REMARK 500 G 0 474 0.07 SIDE CHAIN \ REMARK 500 G 0 492 0.06 SIDE CHAIN \ REMARK 500 G 0 570 0.06 SIDE CHAIN \ REMARK 500 U 0 571 0.07 SIDE CHAIN \ REMARK 500 G 0 582 0.05 SIDE CHAIN \ REMARK 500 G 0 592 0.05 SIDE CHAIN \ REMARK 500 C 0 596 0.07 SIDE CHAIN \ REMARK 500 U 0 598 0.07 SIDE CHAIN \ REMARK 500 U 0 617 0.09 SIDE CHAIN \ REMARK 500 U 0 621 0.06 SIDE CHAIN \ REMARK 500 U 0 622 0.07 SIDE CHAIN \ REMARK 500 A 0 632 0.06 SIDE CHAIN \ REMARK 500 U 0 674 0.07 SIDE CHAIN \ REMARK 500 A 0 698 0.06 SIDE CHAIN \ REMARK 500 C 0 765 0.07 SIDE CHAIN \ REMARK 500 A 0 774 0.06 SIDE CHAIN \ REMARK 500 U 0 792 0.09 SIDE CHAIN \ REMARK 500 A 0 794 0.06 SIDE CHAIN \ REMARK 500 C 0 804 0.06 SIDE CHAIN \ REMARK 500 A 0 813 0.06 SIDE CHAIN \ REMARK 500 G 0 814 0.06 SIDE CHAIN \ REMARK 500 U 0 823 0.07 SIDE CHAIN \ REMARK 500 A 0 833 0.07 SIDE CHAIN \ REMARK 500 U 0 860 0.08 SIDE CHAIN \ REMARK 500 G 0 955 0.08 SIDE CHAIN \ REMARK 500 A 0 956 0.06 SIDE CHAIN \ REMARK 500 A 0 984 0.07 SIDE CHAIN \ REMARK 500 C 0 993 0.07 SIDE CHAIN \ REMARK 500 G 01036 0.05 SIDE CHAIN \ REMARK 500 G 01142 0.08 SIDE CHAIN \ REMARK 500 U 01170 0.07 SIDE CHAIN \ REMARK 500 G 01201 0.06 SIDE CHAIN \ REMARK 500 U 01202 0.07 SIDE CHAIN \ REMARK 500 \ REMARK 500 THIS ENTRY HAS 128 PLANE DEVIATIONS. \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1NKW RELATED DB: PDB \ REMARK 900 THE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM DEIANOCOCCUS \ REMARK 900 RADIODURANS. \ DBREF 2AAR 0 1 2880 GB 6460405 AE002087 4635 7514 \ DBREF 2AAR R 1 95 UNP Q9RXK0 RL23_DEIRA 1 95 \ DBREF 2AAR W 1 67 UNP Q9RXJ4 RL29_DEIRA 1 67 \ DBREF 2AAR 7 1 113 UNP Q9RT21 TIG_DEIRA 1 113 \ SEQRES 1 0 2880 G G U C A A G A U A G U A \ SEQRES 2 0 2880 A G G G U C C A C G G U G \ SEQRES 3 0 2880 G A U G C C C U G G C G C \ SEQRES 4 0 2880 U G G A G C C G A U G A A \ SEQRES 5 0 2880 G G A C G C G A U U A C C \ SEQRES 6 0 2880 U G C G A A A A G C C C C \ SEQRES 7 0 2880 G A C G A G C U G G A G A \ SEQRES 8 0 2880 U A C G C U U U G A C U C \ SEQRES 9 0 2880 G G G G A U G U C C G A A \ SEQRES 10 0 2880 U G G G G A A A C C C A C \ SEQRES 11 0 2880 C U C G U A A G A G G U A \ SEQRES 12 0 2880 U C C G C A A G G A U G G \ SEQRES 13 0 2880 G A A C U C A G G G A A C \ SEQRES 14 0 2880 U G A A A C A U C U C A G \ SEQRES 15 0 2880 U A C C U G A A G G A G A \ SEQRES 16 0 2880 A G A A A G A G A A U U C \ SEQRES 17 0 2880 G A U U C C G U U A G U A \ SEQRES 18 0 2880 G C G G C G A G C G A A C \ SEQRES 19 0 2880 C C G G A U C A G C C C A \ SEQRES 20 0 2880 A A C C G A A A C G C U U \ SEQRES 21 0 2880 G C G U U U C G G G G U U \ SEQRES 22 0 2880 G U A G G A C C A G U U U \ SEQRES 23 0 2880 U U A A G A U U C A A C C \ SEQRES 24 0 2880 C C U C A A G C C G A A G \ SEQRES 25 0 2880 U G G C U G G A A A G C U \ SEQRES 26 0 2880 A C A C C U C A G A A G G \ SEQRES 27 0 2880 U G A G A G U C C U G U A \ SEQRES 28 0 2880 G G C G A A C G A G C G G \ SEQRES 29 0 2880 U U G A C U G U A C U G G \ SEQRES 30 0 2880 C A C C U G A G U A G G U \ SEQRES 31 0 2880 C G U U G U U C G U G A A \ SEQRES 32 0 2880 A C G A U G A C U G A A U \ SEQRES 33 0 2880 C C G C G C G G A C C A C \ SEQRES 34 0 2880 C G C G C A A G G C U A A \ SEQRES 35 0 2880 A U A C U C C C A G U G A \ SEQRES 36 0 2880 C C G A U A G C G C A U A \ SEQRES 37 0 2880 G U A C C G U G A G G G A \ SEQRES 38 0 2880 A A G G U G A A A A G A A \ SEQRES 39 0 2880 C C C C G G G A G G G G A \ SEQRES 40 0 2880 G U G A A A G A G A A C C \ SEQRES 41 0 2880 U G A A A C C G U G G A C \ SEQRES 42 0 2880 U U A C A A G C A G U C A \ SEQRES 43 0 2880 U G G C A C C U U A U G C \ SEQRES 44 0 2880 G U G U U A U G G C G U G \ SEQRES 45 0 2880 C C U A U U G A A G C A U \ SEQRES 46 0 2880 G A G C C G G C G A C U U \ SEQRES 47 0 2880 A G A C C U G A C G U G C \ SEQRES 48 0 2880 G A G C U U A A G U U G A \ SEQRES 49 0 2880 A A A A C G G A G G C G G \ SEQRES 50 0 2880 A G C G A A A G C G A G U \ SEQRES 51 0 2880 C C G A A U A G G G C G G \ SEQRES 52 0 2880 C A U U A G U A C G U C G \ SEQRES 53 0 2880 G G C U A G A C U C G A A \ SEQRES 54 0 2880 A C C A G G U G A G C U A \ SEQRES 55 0 2880 A G C A U G A C C A G G U \ SEQRES 56 0 2880 U G A A A C C C C C G U G \ SEQRES 57 0 2880 A C A G G G G G C G G A G \ SEQRES 58 0 2880 G A C C G A A C C G G U G \ SEQRES 59 0 2880 C C U G C U G A A A C A G \ SEQRES 60 0 2880 U C U C G G A U G A G U U \ SEQRES 61 0 2880 G U G U U U A G G A G U G \ SEQRES 62 0 2880 A A A A G C U A A C C G A \ SEQRES 63 0 2880 A C C U G G A G A U A G C \ SEQRES 64 0 2880 U A G U U C U C C C C G A \ SEQRES 65 0 2880 A A U G U A U U G A G G U \ SEQRES 66 0 2880 A C A G C C U C G G A U G \ SEQRES 67 0 2880 U U G A C C A U G U C C U \ SEQRES 68 0 2880 G U A G A G C A C U C A C \ SEQRES 69 0 2880 A A G G C U A G G G G G C \ SEQRES 70 0 2880 C U A C C A G C U U A C C \ SEQRES 71 0 2880 A A A C C U U A U G A A A \ SEQRES 72 0 2880 C U C C G A A G G G G C A \ SEQRES 73 0 2880 C G C G U U U A G U C C G \ SEQRES 74 0 2880 G G A G U G A G G C U G C \ SEQRES 75 0 2880 G A G A G C U A A C U U C \ SEQRES 76 0 2880 C G U A G C C G A G A G G \ SEQRES 77 0 2880 G A A A C A A C C C A G A \ SEQRES 78 0 2880 C C A U C A G C U A A G G \ SEQRES 79 0 2880 U C C C U A A A U G A U C \ SEQRES 80 0 2880 G C U C A G U G G U U A A \ SEQRES 81 0 2880 G G A U G U G U C G U C G \ SEQRES 82 0 2880 C A U A G A C A G C C A G \ SEQRES 83 0 2880 G A G G U U G G C U U A G \ SEQRES 84 0 2880 A A G C A G C C A C C C U \ SEQRES 85 0 2880 U C A A A G A G U G C G U \ SEQRES 86 0 2880 A A U A G C U C A C U G G \ SEQRES 87 0 2880 U C G A G U G A C G A U G \ SEQRES 88 0 2880 C G C C G A A A A U G A U \ SEQRES 89 0 2880 C G G G G C U C A A G U G \ SEQRES 90 0 2880 A U C U A C C G A A G C U \ SEQRES 91 0 2880 A U G G A U U C A A C U C \ SEQRES 92 0 2880 G C G A A G C G A G U U G \ SEQRES 93 0 2880 U C U G G U A G G G G A G \ SEQRES 94 0 2880 C G U U C A G U C C G C G \ SEQRES 95 0 2880 G A G A A G C C A U A C C \ SEQRES 96 0 2880 G G A A G G A G U G G U G \ SEQRES 97 0 2880 G A G C C G A C U G A A G \ SEQRES 98 0 2880 U G C G G A U G C C G G C \ SEQRES 99 0 2880 A U G A G U A A C G A U A \ SEQRES 100 0 2880 A A A G A A G U G A G A A \ SEQRES 101 0 2880 U C U U C U U C G C C G U \ SEQRES 102 0 2880 A A G G A C A A G G G U U \ SEQRES 103 0 2880 C C U G G G G A A G G G U \ SEQRES 104 0 2880 C G U C C G C C C A G G G \ SEQRES 105 0 2880 A A A G U C G G G A C C U \ SEQRES 106 0 2880 A A G G U G A G G C C G A \ SEQRES 107 0 2880 A C G G C G C A G C C G A \ SEQRES 108 0 2880 U G G A C A G C A G G U C \ SEQRES 109 0 2880 A A G A U U C C U G C A C \ SEQRES 110 0 2880 C G A U C A U G U G G A G \ SEQRES 111 0 2880 U G A U G G A G G G A C G \ SEQRES 112 0 2880 C A U U A C G C U A U C C \ SEQRES 113 0 2880 A A U G C C A A G C U A U \ SEQRES 114 0 2880 G G C U A U G C U G G U U \ SEQRES 115 0 2880 G G U A C G C U C A A G G \ SEQRES 116 0 2880 G C G A U C G G G U C A G \ SEQRES 117 0 2880 A A A A U C U A C C G G U \ SEQRES 118 0 2880 C A C A U G C C U C A G A \ SEQRES 119 0 2880 C G U A U C G G G A G C U \ SEQRES 120 0 2880 U C C U C G G A A G C G A \ SEQRES 121 0 2880 A G U U G G A A A C G C G \ SEQRES 122 0 2880 A C G G U G C C A A G A A \ SEQRES 123 0 2880 A A G C U U C U A A A C G \ SEQRES 124 0 2880 U U G A A A C A U G A U U \ SEQRES 125 0 2880 G C C C G U A C C G C A A \ SEQRES 126 0 2880 A C C G A C A C A G G U G \ SEQRES 127 0 2880 U C C G A G U G U C A A U \ SEQRES 128 0 2880 G C A C U A A G G C G C G \ SEQRES 129 0 2880 C G A G A G A A C C C U C \ SEQRES 130 0 2880 G U U A A G G A A C U U U \ SEQRES 131 0 2880 G C A A U C U C A C C C C \ SEQRES 132 0 2880 G U A A C U U C G G A A G \ SEQRES 133 0 2880 A A G G G G U C C C C A C \ SEQRES 134 0 2880 G C U U C G C G U G G G G \ SEQRES 135 0 2880 C G C A G U G A A U A G G \ SEQRES 136 0 2880 C C C A G G C G A C U G U \ SEQRES 137 0 2880 U U A C C A A A A U C A C \ SEQRES 138 0 2880 A G C A C U C U G C C A A \ SEQRES 139 0 2880 C A C G A A C A G U G G A \ SEQRES 140 0 2880 C G U A U A G G G U G U G \ SEQRES 141 0 2880 A C G C C U G C C C G G U \ SEQRES 142 0 2880 G C C G G A A G G U C A A \ SEQRES 143 0 2880 G U G G A G C G G U G C A \ SEQRES 144 0 2880 A G C U G C G A A A U G A \ SEQRES 145 0 2880 A G C C C C G G U G A A C \ SEQRES 146 0 2880 G G C G G C C G U A A C U \ SEQRES 147 0 2880 A U A A C G G U C C U A A \ SEQRES 148 0 2880 G G U A G C G A A A U U C \ SEQRES 149 0 2880 C U U G U C G G G U A A G \ SEQRES 150 0 2880 U U C C G A C C U G C A C \ SEQRES 151 0 2880 G A A A G G C G U A A C G \ SEQRES 152 0 2880 A U C U G G G C G C U G U \ SEQRES 153 0 2880 C U C A A C G A G G G A C \ SEQRES 154 0 2880 U C G G U G A A A U U G A \ SEQRES 155 0 2880 A U U G G C U G U A A A G \ SEQRES 156 0 2880 A U G C G G C C U A C C C \ SEQRES 157 0 2880 G U A G C A G G A C G A A \ SEQRES 158 0 2880 A A G A C C C C G U G G A \ SEQRES 159 0 2880 G C U U U A C U A U A G U \ SEQRES 160 0 2880 C U G G C A U U G G G A U \ SEQRES 161 0 2880 U C G G G U U U C U C U G \ SEQRES 162 0 2880 C G U A G G A U A G G U G \ SEQRES 163 0 2880 G G A G C C U G C G A A A \ SEQRES 164 0 2880 C U G G C C U U U U G G G \ SEQRES 165 0 2880 G U C G G U G G A G G C A \ SEQRES 166 0 2880 A C G G U G A A A U A C C \ SEQRES 167 0 2880 A C C C U G A G A A A C U \ SEQRES 168 0 2880 U G G A U U U C U A A C C \ SEQRES 169 0 2880 U G A A A A A U C A C U U \ SEQRES 170 0 2880 U C G G G G A C C G U G C \ SEQRES 171 0 2880 U U G G C G G G U A G U U \ SEQRES 172 0 2880 U G A C U G G G G C G G U \ SEQRES 173 0 2880 C G C C U C C C A A A A U \ SEQRES 174 0 2880 G U A A C G G A G G C G C \ SEQRES 175 0 2880 C C A A A G G U C A C C U \ SEQRES 176 0 2880 C A A G A C G G U U G G A \ SEQRES 177 0 2880 A A U C G U C U G U A G A \ SEQRES 178 0 2880 G C G C A A A G G U A G A \ SEQRES 179 0 2880 A G G U G G C U U G A C U \ SEQRES 180 0 2880 G C G A G A C U G A C A C \ SEQRES 181 0 2880 G U C G A G C A G G G A G \ SEQRES 182 0 2880 G A A A C U C G G G C U U \ SEQRES 183 0 2880 A G U G A A C C G G U G G \ SEQRES 184 0 2880 U A C C G U G U G G A A G \ SEQRES 185 0 2880 G G C C A U C G A U C A A \ SEQRES 186 0 2880 C G G A U A A A A G U U A \ SEQRES 187 0 2880 C C C C G G G G A U A A C \ SEQRES 188 0 2880 A G G C U G A U C U C C C \ SEQRES 189 0 2880 C C G A G A G U C C A U A \ SEQRES 190 0 2880 U C G G C G G G G A G G U \ SEQRES 191 0 2880 U U G G C A C C U C G A U \ SEQRES 192 0 2880 G U C G G C U C G U C G C \ SEQRES 193 0 2880 A U C C U G G G G C U G A \ SEQRES 194 0 2880 A G A A G G U C C C A A G \ SEQRES 195 0 2880 G G U U G G G C U G U U C \ SEQRES 196 0 2880 G C C C A U U A A A G C G \ SEQRES 197 0 2880 G C A C G C G A G C U G G \ SEQRES 198 0 2880 G U U C A G A A C G U C G \ SEQRES 199 0 2880 U G A G A C A G U U C G G \ SEQRES 200 0 2880 U C U C U A U C C G C U A \ SEQRES 201 0 2880 C G G G C G C A G G A G A \ SEQRES 202 0 2880 A U U G A G G G G A G U U \ SEQRES 203 0 2880 G C U C C U A G U A C G A \ SEQRES 204 0 2880 G A G G A C C G G A G U G \ SEQRES 205 0 2880 A A C G G A C C G C U G G \ SEQRES 206 0 2880 U C U C C C U G C U G U C \ SEQRES 207 0 2880 G U A C C A A C G G C A C \ SEQRES 208 0 2880 A U G C A G G G U A G C U \ SEQRES 209 0 2880 A U G U C C G G A A C G G \ SEQRES 210 0 2880 A U A A C C G C U G A A A \ SEQRES 211 0 2880 G C A U C U A A G C G G G \ SEQRES 212 0 2880 A A G C C A G C C C C A A \ SEQRES 213 0 2880 G A U G A G U U C U C C C \ SEQRES 214 0 2880 A C U G U U U A U C A G G \ SEQRES 215 0 2880 U A A G A C U C C C G G A \ SEQRES 216 0 2880 A G A C C A C C G G G U U \ SEQRES 217 0 2880 A A G A G G C C A G G C G \ SEQRES 218 0 2880 U G C A C G C A U A G C A \ SEQRES 219 0 2880 A U G U G U U C A G C G G \ SEQRES 220 0 2880 A C U G G U G C U C A U C \ SEQRES 221 0 2880 A G U C G A G G U C U U G \ SEQRES 222 0 2880 A C C A C U C \ SEQRES 1 R 95 MET SER HIS TYR ASP ILE LEU GLN ALA PRO VAL ILE SER \ SEQRES 2 R 95 GLU LYS ALA TYR SER ALA MET GLU ARG GLY VAL TYR SER \ SEQRES 3 R 95 PHE TRP VAL SER PRO LYS ALA THR LYS THR GLU ILE LYS \ SEQRES 4 R 95 ASP ALA ILE GLN GLN ALA PHE GLY VAL ARG VAL ILE GLY \ SEQRES 5 R 95 ILE SER THR MET ASN VAL PRO GLY LYS ARG LYS ARG VAL \ SEQRES 6 R 95 GLY ARG PHE ILE GLY GLN ARG ASN ASP ARG LYS LYS ALA \ SEQRES 7 R 95 ILE VAL ARG LEU ALA GLU GLY GLN SER ILE GLU ALA LEU \ SEQRES 8 R 95 ALA GLY GLN ALA \ SEQRES 1 W 67 MET LYS PRO SER GLU MET ARG ASN LEU GLN ALA THR ASP \ SEQRES 2 W 67 PHE ALA LYS GLU ILE ASP ALA ARG LYS LYS GLU LEU MET \ SEQRES 3 W 67 GLU LEU ARG PHE GLN ALA ALA ALA GLY GLN LEU ALA GLN \ SEQRES 4 W 67 PRO HIS ARG VAL ARG GLN LEU ARG ARG GLU VAL ALA GLN \ SEQRES 5 W 67 LEU ASN THR VAL LYS ALA GLU LEU ALA ARG LYS GLY GLU \ SEQRES 6 W 67 GLN GLN \ SEQRES 1 7 113 ALA GLU LEU ILE SER LYS GLU GLY ASN LYS VAL GLU PHE \ SEQRES 2 7 113 LYS VAL SER VAL PRO ALA ALA GLU VAL ASN ARG ALA TYR \ SEQRES 3 7 113 ASP GLN VAL TRP ALA GLY LEU ALA ARG ASP VAL ARG VAL \ SEQRES 4 7 113 PRO GLY PHE ARG PRO GLY LYS ALA PRO ARG LYS VAL ILE \ SEQRES 5 7 113 GLU ASN ARG VAL GLY LYS GLY TYR VAL GLU SER GLN VAL \ SEQRES 6 7 113 ARG ASP ARG LEU LEU GLU THR HIS TYR SER GLN GLY LEU \ SEQRES 7 7 113 ARG GLU LEU GLY LEU ASN LEU VAL ASP ALA THR VAL ASP \ SEQRES 8 7 113 PRO GLN ASP VAL GLN SER GLY GLN ALA PHE GLU PHE THR \ SEQRES 9 7 113 VAL LYS GLY GLU THR TYR PRO GLU VAL \ CRYST1 169.386 407.063 692.746 90.00 90.00 90.00 I 2 2 2 8 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.005904 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.002457 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.001444 0.00000 \ TER 59360 A 02877 \ ATOM 59361 CA SER R 2 -10.740 174.186 144.262 1.00 81.03 C \ ATOM 59362 CA HIS R 3 -11.221 172.245 147.539 1.00 61.47 C \ ATOM 59363 CA TYR R 4 -12.254 168.663 146.681 1.00 75.16 C \ ATOM 59364 CA ASP R 5 -9.756 168.238 143.922 1.00101.24 C \ ATOM 59365 CA ILE R 6 -7.251 168.714 146.761 1.00 56.90 C \ ATOM 59366 CA LEU R 7 -8.760 165.825 148.727 1.00 46.93 C \ ATOM 59367 CA GLN R 8 -8.835 162.362 147.164 1.00 72.35 C \ ATOM 59368 CA ALA R 9 -10.103 160.283 150.153 1.00 56.32 C \ ATOM 59369 CA PRO R 10 -9.512 159.686 153.856 1.00 50.32 C \ ATOM 59370 CA VAL R 11 -7.583 156.518 154.637 1.00 55.97 C \ ATOM 59371 CA ILE R 12 -9.197 153.300 155.816 1.00 47.09 C \ ATOM 59372 CA SER R 13 -5.904 152.126 157.199 1.00 27.13 C \ ATOM 59373 CA GLU R 14 -5.967 150.524 160.597 1.00 59.81 C \ ATOM 59374 CA LYS R 15 -3.772 153.339 161.884 1.00 63.60 C \ ATOM 59375 CA ALA R 16 -5.805 156.209 160.550 1.00 57.30 C \ ATOM 59376 CA TYR R 17 -8.586 154.965 162.805 1.00 72.99 C \ ATOM 59377 CA SER R 18 -6.543 154.385 165.936 1.00131.14 C \ ATOM 59378 CA ALA R 19 -5.079 157.817 165.173 1.00 41.79 C \ ATOM 59379 CA MET R 20 -8.431 159.479 164.867 1.00 62.81 C \ ATOM 59380 CA GLU R 21 -9.162 158.179 168.348 1.00110.92 C \ ATOM 59381 CA ARG R 22 -6.985 161.131 169.437 1.00 46.16 C \ ATOM 59382 CA GLY R 23 -7.081 163.867 166.757 1.00 61.86 C \ ATOM 59383 CA VAL R 24 -5.025 162.556 163.825 1.00 99.84 C \ ATOM 59384 CA TYR R 25 -6.832 162.224 160.494 1.00 68.53 C \ ATOM 59385 CA SER R 26 -5.496 160.764 157.222 1.00 68.53 C \ ATOM 59386 CA PHE R 27 -6.202 162.289 153.839 1.00 46.27 C \ ATOM 59387 CA TRP R 28 -5.010 161.242 150.428 1.00 81.36 C \ ATOM 59388 CA VAL R 29 -4.168 164.777 149.302 1.00 52.32 C \ ATOM 59389 CA SER R 30 -3.436 165.521 145.627 1.00 52.17 C \ ATOM 59390 CA PRO R 31 0.093 164.602 144.494 1.00 56.68 C \ ATOM 59391 CA LYS R 32 0.851 168.300 143.870 1.00 40.15 C \ ATOM 59392 CA ALA R 33 -1.231 169.905 146.639 1.00 19.38 C \ ATOM 59393 CA THR R 34 1.361 171.580 148.880 1.00 44.48 C \ ATOM 59394 CA LYS R 35 1.133 171.294 152.683 1.00 35.32 C \ ATOM 59395 CA THR R 36 -0.393 174.751 152.726 1.00 33.89 C \ ATOM 59396 CA GLU R 37 -2.672 173.936 149.786 1.00 86.64 C \ ATOM 59397 CA ILE R 38 -3.930 170.902 151.699 1.00 78.12 C \ ATOM 59398 CA LYS R 39 -4.793 172.685 154.921 1.00 37.00 C \ ATOM 59399 CA ASP R 40 -6.103 175.912 153.331 1.00 78.82 C \ ATOM 59400 CA ALA R 41 -8.351 173.182 151.907 1.00 53.69 C \ ATOM 59401 CA ILE R 42 -9.057 171.056 154.958 1.00 75.42 C \ ATOM 59402 CA GLN R 43 -9.621 173.942 157.378 1.00 98.60 C \ ATOM 59403 CA GLN R 44 -12.333 175.894 155.563 1.00133.37 C \ ATOM 59404 CA ALA R 45 -14.090 172.825 154.188 1.00 74.91 C \ ATOM 59405 CA PHE R 46 -13.935 170.919 157.431 1.00 93.39 C \ ATOM 59406 CA GLY R 47 -14.808 173.717 159.872 1.00113.85 C \ ATOM 59407 CA VAL R 48 -11.429 173.023 161.485 1.00114.77 C \ ATOM 59408 CA ARG R 49 -8.099 174.752 162.207 1.00 76.78 C \ ATOM 59409 CA VAL R 50 -5.287 172.186 161.914 1.00 60.68 C \ ATOM 59410 CA ILE R 51 -2.225 173.063 163.968 1.00 51.21 C \ ATOM 59411 CA GLY R 52 -0.159 170.097 162.938 1.00 57.90 C \ ATOM 59412 CA ILE R 53 0.375 169.223 159.283 1.00 90.73 C \ ATOM 59413 CA SER R 54 2.783 166.615 157.986 1.00 63.61 C \ ATOM 59414 CA THR R 55 2.744 165.536 154.352 1.00 72.61 C \ ATOM 59415 CA MET R 56 3.961 162.205 153.069 1.00 41.01 C \ ATOM 59416 CA ASN R 57 4.443 160.957 149.548 1.00 70.63 C \ ATOM 59417 CA VAL R 58 4.037 157.421 148.318 1.00 16.42 C \ ATOM 59418 CA PRO R 59 4.629 155.715 144.961 1.00 51.36 C \ ATOM 59419 CA GLY R 60 2.668 152.664 143.775 1.00 48.82 C \ ATOM 59420 CA LYS R 61 2.896 149.627 141.428 1.00 26.68 C \ ATOM 59421 CA ARG R 62 1.369 146.340 140.384 1.00 68.79 C \ ATOM 59422 CA LYS R 63 1.345 144.473 137.032 1.00 20.42 C \ ATOM 59423 CA ARG R 64 -1.845 142.488 136.705 1.00 53.40 C \ ATOM 59424 CA VAL R 65 -2.533 140.189 133.753 1.00122.84 C \ ATOM 59425 CA GLY R 66 0.211 138.430 131.863 1.00 65.30 C \ ATOM 59426 CA ARG R 67 2.053 140.657 129.405 1.00 96.93 C \ ATOM 59427 CA PHE R 68 5.462 141.195 130.956 1.00200.00 C \ ATOM 59428 CA ILE R 69 3.833 144.631 131.174 1.00 91.36 C \ ATOM 59429 CA GLY R 70 2.254 146.422 134.108 1.00 62.51 C \ ATOM 59430 CA GLN R 71 2.463 149.841 135.742 1.00 57.00 C \ ATOM 59431 CA ARG R 72 1.531 152.058 138.697 1.00 83.55 C \ ATOM 59432 CA ASN R 73 -0.235 155.181 140.094 1.00 25.15 C \ ATOM 59433 CA ASP R 74 1.613 157.130 142.810 1.00 49.18 C \ ATOM 59434 CA ARG R 75 -0.208 159.593 145.065 1.00 54.01 C \ ATOM 59435 CA LYS R 76 0.252 161.629 148.263 1.00 58.09 C \ ATOM 59436 CA LYS R 77 -0.857 161.355 151.877 1.00 33.20 C \ ATOM 59437 CA ALA R 78 -1.462 163.743 154.746 1.00 46.00 C \ ATOM 59438 CA ILE R 79 -1.612 163.198 158.497 1.00 62.16 C \ ATOM 59439 CA VAL R 80 -2.721 166.251 160.463 1.00 32.36 C \ ATOM 59440 CA ARG R 81 -3.160 167.322 164.107 1.00 53.68 C \ ATOM 59441 CA LEU R 82 -6.326 169.428 164.191 1.00 57.64 C \ ATOM 59442 CA ALA R 83 -7.366 171.915 166.844 1.00131.64 C \ ATOM 59443 CA GLU R 84 -7.162 171.217 170.564 1.00155.28 C \ ATOM 59444 CA GLY R 85 -10.522 169.486 170.227 1.00 76.41 C \ ATOM 59445 CA GLN R 86 -12.697 167.344 167.941 1.00107.55 C \ ATOM 59446 CA SER R 87 -12.061 165.880 164.463 1.00151.13 C \ ATOM 59447 CA ILE R 88 -14.940 165.841 161.924 1.00167.14 C \ ATOM 59448 CA GLU R 89 -18.524 166.030 163.260 1.00200.00 C \ ATOM 59449 CA ALA R 90 -19.738 163.057 161.202 1.00143.02 C \ ATOM 59450 CA LEU R 91 -18.870 162.310 157.545 1.00156.55 C \ ATOM 59451 CA ALA R 92 -16.339 159.556 158.344 1.00199.11 C \ ATOM 59452 CA GLY R 93 -18.032 158.514 161.586 1.00120.35 C \ ATOM 59453 CA GLN R 94 -21.380 157.370 160.147 1.00181.59 C \ TER 59454 GLN R 94 \ TER 59520 GLN W 66 \ TER 59634 VAL 7 113 \ MASTER 535 0 0 0 0 0 0 659630 4 0 245 \ END \ """, "2aarchainR") cmd.hide("all") cmd.color('grey70', "2aarchainR") cmd.show('cartoon', "2aarchainR") cmd.center("2aarchainR", state=0, origin=1) cmd.zoom("2aarchainR", animate=-1) cmd.select("e2aarR1", "c. R & i. 2-94") cmd.color("red", "e2aarR1") cmd.disable("e2aarR1")