cmd.read_pdbstr("""\ HEADER PROTEIN TRANSPORT 03-AUG-05 2AKI \ TITLE NORMAL MODE-BASED FLEXIBLE FITTED COORDINATES OF A TRANSLOCATING \ TITLE 2 SECYEG PROTEIN-CONDUCTING CHANNEL INTO THE CRYO-EM MAP OF A SECYEG- \ TITLE 3 NASCENT CHAIN-70S RIBOSOME COMPLEX FROM E. COLI \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: PROTEIN-EXPORT MEMBRANE PROTEIN SECG; \ COMPND 3 CHAIN: X, A; \ COMPND 4 SYNONYM: PREPROTEIN TRANSLOCASE BAND 1 SUBUNIT, P12; \ COMPND 5 ENGINEERED: YES; \ COMPND 6 MOL_ID: 2; \ COMPND 7 MOLECULE: PREPROTEIN TRANSLOCASE SECY SUBUNIT; \ COMPND 8 CHAIN: Y, B; \ COMPND 9 FRAGMENT: PLUG TMH 2A OMITTED; \ COMPND 10 ENGINEERED: YES; \ COMPND 11 MUTATION: YES; \ COMPND 12 MOL_ID: 3; \ COMPND 13 MOLECULE: PREPROTEIN TRANSLOCASE SECE SUBUNIT; \ COMPND 14 CHAIN: Z, C; \ COMPND 15 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 3 ORGANISM_TAXID: 562; \ SOURCE 4 GENE: SECG; \ SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 7 MOL_ID: 2; \ SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 9 ORGANISM_TAXID: 562; \ SOURCE 10 GENE: SECY, PRLA; \ SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 13 MOL_ID: 3; \ SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 15 ORGANISM_TAXID: 562; \ SOURCE 16 GENE: SECE, PRLG; \ SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562 \ KEYWDS PROTEIN TRANSPORT, TRANSLOCATION, TRANSMEMBRANE, TRANSPORT \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN X, Y, Z, A, B, C \ AUTHOR K.MITRA,C.SCHAFFITZEL,T.SHAIKH,F.TAMA,S.JENNI,C.L.BROOKS III,N.BAN, \ AUTHOR 2 J.FRANK \ REVDAT 4 14-FEB-24 2AKI 1 REMARK \ REVDAT 3 18-JUL-18 2AKI 1 REMARK \ REVDAT 2 24-FEB-09 2AKI 1 VERSN \ REVDAT 1 15-NOV-05 2AKI 0 \ JRNL AUTH K.MITRA,C.SCHAFFITZEL,T.SHAIKH,F.TAMA,S.JENNI,C.L.BROOKS, \ JRNL AUTH 2 N.BAN,J.FRANK \ JRNL TITL STRUCTURE OF THE E. COLI PROTEIN-CONDUCTING CHANNEL BOUND TO \ JRNL TITL 2 A TRANSLATING RIBOSOME. \ JRNL REF NATURE V. 438 318 2005 \ JRNL REFN ISSN 0028-0836 \ JRNL PMID 16292303 \ JRNL DOI 10.1038/NATURE04133 \ REMARK 2 \ REMARK 2 RESOLUTION. 14.90 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : RSR2000, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : NULL \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT \ REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT, R-FACTOR \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : METHOD--NORMAL MODE-BASED FLEXIBLE FITTING \ REMARK 3 REFINEMENT PROTOCOL--NORMAL MODE-BASED FLEXIBLE FITTING, REAL \ REMARK 3 SPACE REFINEMENT \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 14.90 \ REMARK 3 NUMBER OF PARTICLES : 53325 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: THE RESOLUTION IS BASED ON FSC AT 0.5 CUT-OFF \ REMARK 4 \ REMARK 4 2AKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-05. \ REMARK 100 THE DEPOSITION ID IS D_1000034001. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : PROTEIN-CONDUCTING CHANNEL; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL \ REMARK 245 SAMPLE SUPPORT DETAILS : NULL \ REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL \ REMARK 245 SAMPLE BUFFER : NULL \ REMARK 245 PH : NULL \ REMARK 245 SAMPLE DETAILS : DIMER OF SECYEG HETEROTRIMER; \ REMARK 245 DIMER OF SECYEG HETEROTRIMER; DIMER OF SECYEG HETEROTRIMER \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : 09-MAR-04 \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 93.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F30 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 4300.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 NOMINAL CS : 2.26 \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1100.00 \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 39000 \ REMARK 245 CALIBRATED MAGNIFICATION : 39000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 300 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, Y, Z, A, B, C \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: EMD-1143 RELATED DB: EMDB \ REMARK 900 CRYO-EM MAP OF THE E. COLI PROTEIN-CONDUCTING CHANNEL BOUND TO A \ REMARK 900 TRANSLATING RIBOSOME \ REMARK 900 RELATED ID: 2AKH RELATED DB: PDB \ REMARK 900 NORMAL MODE-BASED FLEXIBLE FITTED COORDINATES OF A NON- \ REMARK 900 TRANSLOCATING SECYEG PROTEIN-CONDUCTING CHANNEL INTO THE CRYO-EM \ REMARK 900 MAP OF A SECYEG-NASCENT CHAIN-70S RIBOSOME COMPLEX FROM E. COLI \ DBREF 2AKI X 1 77 UNP P33582 SECG_ECOLI 1 77 \ DBREF 2AKI A 1 77 UNP P33582 SECG_ECOLI 1 77 \ DBREF 2AKI Y 1 39 UNP P03844 SECY_ECOLI 1 39 \ DBREF 2AKI Y 76 436 UNP P03844 SECY_ECOLI 76 436 \ DBREF 2AKI B 1 400 UNP P03844 SECY_ECOLI 1 436 \ DBREF 2AKI B 76 436 UNP P03844 SECY_ECOLI 76 436 \ DBREF 2AKI Z 17 127 UNP P16920 SECE_ECOLI 17 127 \ DBREF 2AKI C 17 127 UNP P16920 SECE_ECOLI 17 127 \ SEQRES 1 X 77 MET TYR GLU ALA LEU LEU VAL VAL PHE LEU ILE VAL ALA \ SEQRES 2 X 77 ILE GLY LEU VAL GLY LEU ILE MET LEU GLN GLN GLY LYS \ SEQRES 3 X 77 GLY ALA ASP MET GLY ALA SER PHE GLY ALA GLY ALA SER \ SEQRES 4 X 77 ALA THR LEU PHE GLY SER SER GLY SER GLY ASN PHE MET \ SEQRES 5 X 77 THR ARG MET THR ALA LEU LEU ALA THR LEU PHE PHE ILE \ SEQRES 6 X 77 ILE SER LEU VAL LEU GLY ASN ILE ASN SER ASN LYS \ SEQRES 1 Y 400 MET ALA LYS GLN PRO GLY LEU ASP PHE GLN SER ALA LYS \ SEQRES 2 Y 400 GLY GLY LEU GLY GLU LEU LYS ARG ARG LEU LEU PHE VAL \ SEQRES 3 Y 400 ILE GLY ALA LEU ILE VAL PHE ARG ILE GLY SER PHE ILE \ SEQRES 4 Y 400 SER ILE PHE ALA LEU GLY ILE MET PRO TYR ILE SER ALA \ SEQRES 5 Y 400 SER ILE ILE ILE GLN LEU LEU THR VAL VAL HIS PRO THR \ SEQRES 6 Y 400 LEU ALA GLU ILE LYS LYS GLU GLY GLU SER GLY ARG ARG \ SEQRES 7 Y 400 LYS ILE SER GLN TYR THR ARG TYR GLY THR LEU VAL LEU \ SEQRES 8 Y 400 ALA ILE PHE GLN SER ILE GLY ILE ALA THR GLY LEU PRO \ SEQRES 9 Y 400 ASN MET PRO GLY MET GLN GLY LEU VAL ILE ASN PRO GLY \ SEQRES 10 Y 400 PHE ALA PHE TYR PHE THR ALA VAL VAL SER LEU VAL THR \ SEQRES 11 Y 400 GLY THR MET PHE LEU MET TRP LEU GLY GLU GLN ILE THR \ SEQRES 12 Y 400 GLU ARG GLY ILE GLY ASN GLY ILE SER ILE ILE ILE PHE \ SEQRES 13 Y 400 ALA GLY ILE VAL ALA GLY LEU PRO PRO ALA ILE ALA HIS \ SEQRES 14 Y 400 THR ILE GLU GLN ALA ARG GLN GLY ASP LEU HIS PHE LEU \ SEQRES 15 Y 400 VAL LEU LEU LEU VAL ALA VAL LEU VAL PHE ALA VAL THR \ SEQRES 16 Y 400 PHE PHE VAL VAL PHE VAL GLU ARG GLY GLN ARG ARG ILE \ SEQRES 17 Y 400 VAL VAL ASN TYR ALA LYS ARG GLN GLN GLY ARG ARG VAL \ SEQRES 18 Y 400 TYR ALA ALA GLN SER THR HIS LEU PRO LEU LYS VAL ASN \ SEQRES 19 Y 400 MET ALA GLY VAL ILE PRO ALA ILE PHE ALA SER SER ILE \ SEQRES 20 Y 400 ILE LEU PHE PRO ALA THR ILE ALA SER TRP PHE GLY GLY \ SEQRES 21 Y 400 GLY THR GLY TRP ASN TRP LEU THR THR ILE SER LEU TYR \ SEQRES 22 Y 400 LEU GLN PRO GLY GLN PRO LEU TYR VAL LEU LEU TYR ALA \ SEQRES 23 Y 400 SER ALA ILE ILE PHE PHE CYS PHE PHE TYR THR ALA LEU \ SEQRES 24 Y 400 VAL PHE ASN PRO ARG GLU THR ALA ASP ASN LEU LYS LYS \ SEQRES 25 Y 400 SER GLY ALA PHE VAL PRO GLY ILE ARG PRO GLY GLU GLN \ SEQRES 26 Y 400 THR ALA LYS TYR ILE ASP LYS VAL MET THR ARG LEU THR \ SEQRES 27 Y 400 LEU VAL GLY ALA LEU TYR ILE THR PHE ILE CYS LEU ILE \ SEQRES 28 Y 400 PRO GLU PHE MET ARG ASP ALA MET LYS VAL PRO PHE TYR \ SEQRES 29 Y 400 PHE GLY GLY THR SER LEU LEU ILE VAL VAL VAL VAL ILE \ SEQRES 30 Y 400 MET ASP PHE MET ALA GLN VAL GLN THR LEU MET MET SER \ SEQRES 31 Y 400 SER GLN TYR GLU SER ALA LEU LYS LYS ALA \ SEQRES 1 Z 111 MET LYS TRP VAL VAL VAL VAL ALA LEU LEU LEU VAL ALA \ SEQRES 2 Z 111 ILE VAL GLY ASN TYR LEU TYR ARG ASP ILE MET LEU PRO \ SEQRES 3 Z 111 LEU ARG ALA LEU ALA VAL VAL ILE LEU ILE ALA ALA ALA \ SEQRES 4 Z 111 GLY GLY VAL ALA LEU LEU THR THR LYS GLY LYS ALA THR \ SEQRES 5 Z 111 VAL ALA PHE ALA ARG GLU ALA ARG THR GLU VAL ARG LYS \ SEQRES 6 Z 111 VAL ILE TRP PRO THR ARG GLN GLU THR LEU HIS THR THR \ SEQRES 7 Z 111 LEU ILE VAL ALA ALA VAL THR ALA VAL MET SER LEU ILE \ SEQRES 8 Z 111 LEU TRP GLY LEU ASP GLY ILE LEU VAL ARG LEU VAL SER \ SEQRES 9 Z 111 PHE ILE THR GLY LEU ARG PHE \ SEQRES 1 A 77 MET TYR GLU ALA LEU LEU VAL VAL PHE LEU ILE VAL ALA \ SEQRES 2 A 77 ILE GLY LEU VAL GLY LEU ILE MET LEU GLN GLN GLY LYS \ SEQRES 3 A 77 GLY ALA ASP MET GLY ALA SER PHE GLY ALA GLY ALA SER \ SEQRES 4 A 77 ALA THR LEU PHE GLY SER SER GLY SER GLY ASN PHE MET \ SEQRES 5 A 77 THR ARG MET THR ALA LEU LEU ALA THR LEU PHE PHE ILE \ SEQRES 6 A 77 ILE SER LEU VAL LEU GLY ASN ILE ASN SER ASN LYS \ SEQRES 1 B 400 MET ALA LYS GLN PRO GLY LEU ASP PHE GLN SER ALA LYS \ SEQRES 2 B 400 GLY GLY LEU GLY GLU LEU LYS ARG ARG LEU LEU PHE VAL \ SEQRES 3 B 400 ILE GLY ALA LEU ILE VAL PHE ARG ILE GLY SER PHE ILE \ SEQRES 4 B 400 SER ILE PHE ALA LEU GLY ILE MET PRO TYR ILE SER ALA \ SEQRES 5 B 400 SER ILE ILE ILE GLN LEU LEU THR VAL VAL HIS PRO THR \ SEQRES 6 B 400 LEU ALA GLU ILE LYS LYS GLU GLY GLU SER GLY ARG ARG \ SEQRES 7 B 400 LYS ILE SER GLN TYR THR ARG TYR GLY THR LEU VAL LEU \ SEQRES 8 B 400 ALA ILE PHE GLN SER ILE GLY ILE ALA THR GLY LEU PRO \ SEQRES 9 B 400 ASN MET PRO GLY MET GLN GLY LEU VAL ILE ASN PRO GLY \ SEQRES 10 B 400 PHE ALA PHE TYR PHE THR ALA VAL VAL SER LEU VAL THR \ SEQRES 11 B 400 GLY THR MET PHE LEU MET TRP LEU GLY GLU GLN ILE THR \ SEQRES 12 B 400 GLU ARG GLY ILE GLY ASN GLY ILE SER ILE ILE ILE PHE \ SEQRES 13 B 400 ALA GLY ILE VAL ALA GLY LEU PRO PRO ALA ILE ALA HIS \ SEQRES 14 B 400 THR ILE GLU GLN ALA ARG GLN GLY ASP LEU HIS PHE LEU \ SEQRES 15 B 400 VAL LEU LEU LEU VAL ALA VAL LEU VAL PHE ALA VAL THR \ SEQRES 16 B 400 PHE PHE VAL VAL PHE VAL GLU ARG GLY GLN ARG ARG ILE \ SEQRES 17 B 400 VAL VAL ASN TYR ALA LYS ARG GLN GLN GLY ARG ARG VAL \ SEQRES 18 B 400 TYR ALA ALA GLN SER THR HIS LEU PRO LEU LYS VAL ASN \ SEQRES 19 B 400 MET ALA GLY VAL ILE PRO ALA ILE PHE ALA SER SER ILE \ SEQRES 20 B 400 ILE LEU PHE PRO ALA THR ILE ALA SER TRP PHE GLY GLY \ SEQRES 21 B 400 GLY THR GLY TRP ASN TRP LEU THR THR ILE SER LEU TYR \ SEQRES 22 B 400 LEU GLN PRO GLY GLN PRO LEU TYR VAL LEU LEU TYR ALA \ SEQRES 23 B 400 SER ALA ILE ILE PHE PHE CYS PHE PHE TYR THR ALA LEU \ SEQRES 24 B 400 VAL PHE ASN PRO ARG GLU THR ALA ASP ASN LEU LYS LYS \ SEQRES 25 B 400 SER GLY ALA PHE VAL PRO GLY ILE ARG PRO GLY GLU GLN \ SEQRES 26 B 400 THR ALA LYS TYR ILE ASP LYS VAL MET THR ARG LEU THR \ SEQRES 27 B 400 LEU VAL GLY ALA LEU TYR ILE THR PHE ILE CYS LEU ILE \ SEQRES 28 B 400 PRO GLU PHE MET ARG ASP ALA MET LYS VAL PRO PHE TYR \ SEQRES 29 B 400 PHE GLY GLY THR SER LEU LEU ILE VAL VAL VAL VAL ILE \ SEQRES 30 B 400 MET ASP PHE MET ALA GLN VAL GLN THR LEU MET MET SER \ SEQRES 31 B 400 SER GLN TYR GLU SER ALA LEU LYS LYS ALA \ SEQRES 1 C 111 MET LYS TRP VAL VAL VAL VAL ALA LEU LEU LEU VAL ALA \ SEQRES 2 C 111 ILE VAL GLY ASN TYR LEU TYR ARG ASP ILE MET LEU PRO \ SEQRES 3 C 111 LEU ARG ALA LEU ALA VAL VAL ILE LEU ILE ALA ALA ALA \ SEQRES 4 C 111 GLY GLY VAL ALA LEU LEU THR THR LYS GLY LYS ALA THR \ SEQRES 5 C 111 VAL ALA PHE ALA ARG GLU ALA ARG THR GLU VAL ARG LYS \ SEQRES 6 C 111 VAL ILE TRP PRO THR ARG GLN GLU THR LEU HIS THR THR \ SEQRES 7 C 111 LEU ILE VAL ALA ALA VAL THR ALA VAL MET SER LEU ILE \ SEQRES 8 C 111 LEU TRP GLY LEU ASP GLY ILE LEU VAL ARG LEU VAL SER \ SEQRES 9 C 111 PHE ILE THR GLY LEU ARG PHE \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ ATOM 1 CA MET X 1 143.781 -26.730 51.022 1.00 15.00 C \ ATOM 2 CA TYR X 2 145.458 -23.699 49.395 1.00 15.00 C \ ATOM 3 CA GLU X 3 145.693 -24.682 45.711 1.00 15.00 C \ ATOM 4 CA ALA X 4 143.259 -27.525 46.432 1.00 15.00 C \ ATOM 5 CA LEU X 5 140.672 -24.965 47.549 1.00 15.00 C \ ATOM 6 CA LEU X 6 140.178 -22.785 44.455 1.00 15.00 C \ ATOM 7 CA VAL X 7 138.482 -25.735 42.735 1.00 15.00 C \ ATOM 8 CA VAL X 8 135.756 -25.682 45.399 1.00 15.00 C \ ATOM 9 CA PHE X 9 134.986 -21.974 44.973 1.00 15.00 C \ ATOM 10 CA LEU X 10 135.211 -22.378 41.192 1.00 15.00 C \ ATOM 11 CA ILE X 11 132.471 -24.989 40.787 1.00 15.00 C \ ATOM 12 CA VAL X 12 130.258 -23.373 43.440 1.00 15.00 C \ ATOM 13 CA ALA X 13 130.110 -20.136 41.430 1.00 15.00 C \ ATOM 14 CA ILE X 14 129.378 -21.674 38.027 1.00 15.00 C \ ATOM 15 CA GLY X 15 127.111 -24.020 39.969 1.00 15.00 C \ ATOM 16 CA LEU X 16 124.688 -21.210 40.720 1.00 15.00 C \ ATOM 17 CA VAL X 17 124.162 -20.925 36.938 1.00 15.00 C \ ATOM 18 CA GLY X 18 122.111 -24.064 37.205 1.00 15.00 C \ ATOM 19 CA LEU X 19 120.211 -22.558 40.174 1.00 15.00 C \ ATOM 20 CA ILE X 20 118.449 -19.210 40.928 1.00 15.00 C \ ATOM 21 CA MET X 21 118.074 -17.363 37.625 1.00 15.00 C \ ATOM 22 CA LEU X 22 115.483 -19.647 36.025 1.00 15.00 C \ ATOM 23 CA GLN X 23 113.069 -21.066 38.660 1.00 15.00 C \ ATOM 24 CA GLN X 24 109.769 -20.401 36.842 1.00 15.00 C \ ATOM 25 CA GLY X 25 106.584 -19.828 38.838 1.00 15.00 C \ ATOM 26 CA LYS X 26 103.851 -17.813 37.082 1.00 15.00 C \ ATOM 27 CA GLY X 27 102.518 -14.276 37.336 1.00 15.00 C \ ATOM 28 CA ALA X 28 101.552 -12.548 40.557 1.00 15.00 C \ ATOM 29 CA ASP X 29 98.119 -11.495 41.841 1.00 15.00 C \ ATOM 30 CA MET X 30 95.689 -8.903 40.380 1.00 15.00 C \ ATOM 31 CA GLY X 31 97.150 -9.879 37.051 1.00 15.00 C \ ATOM 32 CA ALA X 32 96.615 -12.934 34.891 1.00 15.00 C \ ATOM 33 CA SER X 33 94.861 -16.153 35.903 1.00 15.00 C \ ATOM 34 CA PHE X 34 97.645 -18.754 35.571 1.00 15.00 C \ ATOM 35 CA GLY X 35 96.743 -21.371 32.934 1.00 15.00 C \ ATOM 36 CA ALA X 36 96.259 -25.159 32.749 1.00 15.00 C \ ATOM 37 CA GLY X 37 93.494 -27.161 31.093 1.00 15.00 C \ ATOM 38 CA ALA X 38 94.944 -29.944 28.942 1.00 15.00 C \ ATOM 39 CA SER X 39 96.324 -28.143 25.879 1.00 15.00 C \ ATOM 40 CA ALA X 40 96.205 -24.849 27.829 1.00 15.00 C \ ATOM 41 CA THR X 41 99.567 -23.339 28.854 1.00 15.00 C \ ATOM 42 CA LEU X 42 100.845 -19.868 27.745 1.00 15.00 C \ ATOM 43 CA PHE X 43 99.110 -17.440 25.370 1.00 15.00 C \ ATOM 44 CA GLY X 44 100.760 -17.554 21.979 1.00 15.00 C \ ATOM 45 CA SER X 45 99.808 -14.250 20.322 1.00 15.00 C \ ATOM 46 CA SER X 46 102.719 -13.140 18.101 1.00 15.00 C \ ATOM 47 CA GLY X 47 105.665 -11.889 20.143 1.00 15.00 C \ ATOM 48 CA SER X 48 108.058 -14.037 22.110 1.00 15.00 C \ ATOM 49 CA GLY X 49 107.803 -15.215 25.659 1.00 15.00 C \ ATOM 50 CA ASN X 50 109.080 -18.623 26.687 1.00 15.00 C \ ATOM 51 CA PHE X 51 111.023 -19.023 29.920 1.00 15.00 C \ ATOM 52 CA MET X 52 109.216 -17.322 32.833 1.00 15.00 C \ ATOM 53 CA THR X 53 111.183 -15.883 35.822 1.00 15.00 C \ ATOM 54 CA ARG X 54 110.715 -13.247 38.570 1.00 15.00 C \ ATOM 55 CA MET X 55 112.198 -9.813 37.885 1.00 15.00 C \ ATOM 56 CA THR X 56 113.018 -9.227 41.537 1.00 15.00 C \ ATOM 57 CA ALA X 57 115.210 -12.330 41.562 1.00 15.00 C \ ATOM 58 CA LEU X 58 116.881 -11.275 38.305 1.00 15.00 C \ ATOM 59 CA LEU X 59 119.310 -9.163 40.343 1.00 15.00 C \ ATOM 60 CA ALA X 60 120.102 -11.974 42.782 1.00 15.00 C \ ATOM 61 CA THR X 61 122.328 -14.337 40.779 1.00 15.00 C \ ATOM 62 CA LEU X 62 125.635 -12.617 41.525 1.00 15.00 C \ ATOM 63 CA PHE X 63 124.276 -10.319 44.241 1.00 15.00 C \ ATOM 64 CA PHE X 64 124.424 -13.472 46.369 1.00 15.00 C \ ATOM 65 CA ILE X 65 127.722 -14.823 45.005 1.00 15.00 C \ ATOM 66 CA ILE X 66 129.853 -12.001 46.420 1.00 15.00 C \ ATOM 67 CA SER X 67 128.417 -12.782 49.862 1.00 15.00 C \ ATOM 68 CA LEU X 68 129.525 -16.437 49.822 1.00 15.00 C \ ATOM 69 CA VAL X 69 132.978 -15.837 48.310 1.00 15.00 C \ ATOM 70 CA LEU X 70 133.858 -13.392 51.088 1.00 15.00 C \ ATOM 71 CA GLY X 71 136.890 -15.410 52.154 1.00 15.00 C \ ATOM 72 CA ASN X 72 139.090 -16.831 49.400 1.00 15.00 C \ ATOM 73 CA ILE X 73 142.028 -14.531 48.708 1.00 15.00 C \ ATOM 74 CA ASN X 74 141.602 -11.928 51.465 1.00 15.00 C \ ATOM 75 CA SER X 75 141.215 -13.714 54.806 1.00 15.00 C \ ATOM 76 CA ASN X 76 144.718 -13.962 56.279 1.00 15.00 C \ ATOM 77 CA LYS X 77 144.660 -12.472 59.814 1.00 15.00 C \ TER 78 LYS X 77 \ TER 479 ALA Y 436 \ TER 591 PHE Z 127 \ TER 669 LYS A 77 \ TER 1070 ALA B 436 \ TER 1182 PHE C 127 \ MASTER 107 0 0 0 0 0 0 6 1176 6 0 92 \ END \ """, "2akichainX") cmd.hide("all") cmd.color('grey70', "2akichainX") cmd.show('cartoon', "2akichainX") cmd.center("2akichainX", state=0, origin=1) cmd.zoom("2akichainX", animate=-1) cmd.select("e2akiX1", "c. X & i. 1-77") cmd.color("red", "e2akiX1") cmd.disable("e2akiX1")