cmd.read_pdbstr("""\ HEADER PROTEIN TRANSPORT 03-AUG-05 2AKI \ TITLE NORMAL MODE-BASED FLEXIBLE FITTED COORDINATES OF A TRANSLOCATING \ TITLE 2 SECYEG PROTEIN-CONDUCTING CHANNEL INTO THE CRYO-EM MAP OF A SECYEG- \ TITLE 3 NASCENT CHAIN-70S RIBOSOME COMPLEX FROM E. COLI \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: PROTEIN-EXPORT MEMBRANE PROTEIN SECG; \ COMPND 3 CHAIN: X, A; \ COMPND 4 SYNONYM: PREPROTEIN TRANSLOCASE BAND 1 SUBUNIT, P12; \ COMPND 5 ENGINEERED: YES; \ COMPND 6 MOL_ID: 2; \ COMPND 7 MOLECULE: PREPROTEIN TRANSLOCASE SECY SUBUNIT; \ COMPND 8 CHAIN: Y, B; \ COMPND 9 FRAGMENT: PLUG TMH 2A OMITTED; \ COMPND 10 ENGINEERED: YES; \ COMPND 11 MUTATION: YES; \ COMPND 12 MOL_ID: 3; \ COMPND 13 MOLECULE: PREPROTEIN TRANSLOCASE SECE SUBUNIT; \ COMPND 14 CHAIN: Z, C; \ COMPND 15 ENGINEERED: YES \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 3 ORGANISM_TAXID: 562; \ SOURCE 4 GENE: SECG; \ SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 7 MOL_ID: 2; \ SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 9 ORGANISM_TAXID: 562; \ SOURCE 10 GENE: SECY, PRLA; \ SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 13 MOL_ID: 3; \ SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 15 ORGANISM_TAXID: 562; \ SOURCE 16 GENE: SECE, PRLG; \ SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562 \ KEYWDS PROTEIN TRANSPORT, TRANSLOCATION, TRANSMEMBRANE, TRANSPORT \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN X, Y, Z, A, B, C \ AUTHOR K.MITRA,C.SCHAFFITZEL,T.SHAIKH,F.TAMA,S.JENNI,C.L.BROOKS III,N.BAN, \ AUTHOR 2 J.FRANK \ REVDAT 4 14-FEB-24 2AKI 1 REMARK \ REVDAT 3 18-JUL-18 2AKI 1 REMARK \ REVDAT 2 24-FEB-09 2AKI 1 VERSN \ REVDAT 1 15-NOV-05 2AKI 0 \ JRNL AUTH K.MITRA,C.SCHAFFITZEL,T.SHAIKH,F.TAMA,S.JENNI,C.L.BROOKS, \ JRNL AUTH 2 N.BAN,J.FRANK \ JRNL TITL STRUCTURE OF THE E. COLI PROTEIN-CONDUCTING CHANNEL BOUND TO \ JRNL TITL 2 A TRANSLATING RIBOSOME. \ JRNL REF NATURE V. 438 318 2005 \ JRNL REFN ISSN 0028-0836 \ JRNL PMID 16292303 \ JRNL DOI 10.1038/NATURE04133 \ REMARK 2 \ REMARK 2 RESOLUTION. 14.90 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : RSR2000, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : NULL \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT \ REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT, R-FACTOR \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : METHOD--NORMAL MODE-BASED FLEXIBLE FITTING \ REMARK 3 REFINEMENT PROTOCOL--NORMAL MODE-BASED FLEXIBLE FITTING, REAL \ REMARK 3 SPACE REFINEMENT \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 14.90 \ REMARK 3 NUMBER OF PARTICLES : 53325 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: THE RESOLUTION IS BASED ON FSC AT 0.5 CUT-OFF \ REMARK 4 \ REMARK 4 2AKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-05. \ REMARK 100 THE DEPOSITION ID IS D_1000034001. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : PROTEIN-CONDUCTING CHANNEL; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY; \ REMARK 245 PROTEIN TRANSLOCASE ACTIVITY \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL \ REMARK 245 SAMPLE SUPPORT DETAILS : NULL \ REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL \ REMARK 245 SAMPLE BUFFER : NULL \ REMARK 245 PH : NULL \ REMARK 245 SAMPLE DETAILS : DIMER OF SECYEG HETEROTRIMER; \ REMARK 245 DIMER OF SECYEG HETEROTRIMER; DIMER OF SECYEG HETEROTRIMER \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : 09-MAR-04 \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 93.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F30 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 4300.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 NOMINAL CS : 2.26 \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1100.00 \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 39000 \ REMARK 245 CALIBRATED MAGNIFICATION : 39000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 300 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, Y, Z, A, B, C \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: EMD-1143 RELATED DB: EMDB \ REMARK 900 CRYO-EM MAP OF THE E. COLI PROTEIN-CONDUCTING CHANNEL BOUND TO A \ REMARK 900 TRANSLATING RIBOSOME \ REMARK 900 RELATED ID: 2AKH RELATED DB: PDB \ REMARK 900 NORMAL MODE-BASED FLEXIBLE FITTED COORDINATES OF A NON- \ REMARK 900 TRANSLOCATING SECYEG PROTEIN-CONDUCTING CHANNEL INTO THE CRYO-EM \ REMARK 900 MAP OF A SECYEG-NASCENT CHAIN-70S RIBOSOME COMPLEX FROM E. COLI \ DBREF 2AKI X 1 77 UNP P33582 SECG_ECOLI 1 77 \ DBREF 2AKI A 1 77 UNP P33582 SECG_ECOLI 1 77 \ DBREF 2AKI Y 1 39 UNP P03844 SECY_ECOLI 1 39 \ DBREF 2AKI Y 76 436 UNP P03844 SECY_ECOLI 76 436 \ DBREF 2AKI B 1 400 UNP P03844 SECY_ECOLI 1 436 \ DBREF 2AKI B 76 436 UNP P03844 SECY_ECOLI 76 436 \ DBREF 2AKI Z 17 127 UNP P16920 SECE_ECOLI 17 127 \ DBREF 2AKI C 17 127 UNP P16920 SECE_ECOLI 17 127 \ SEQRES 1 X 77 MET TYR GLU ALA LEU LEU VAL VAL PHE LEU ILE VAL ALA \ SEQRES 2 X 77 ILE GLY LEU VAL GLY LEU ILE MET LEU GLN GLN GLY LYS \ SEQRES 3 X 77 GLY ALA ASP MET GLY ALA SER PHE GLY ALA GLY ALA SER \ SEQRES 4 X 77 ALA THR LEU PHE GLY SER SER GLY SER GLY ASN PHE MET \ SEQRES 5 X 77 THR ARG MET THR ALA LEU LEU ALA THR LEU PHE PHE ILE \ SEQRES 6 X 77 ILE SER LEU VAL LEU GLY ASN ILE ASN SER ASN LYS \ SEQRES 1 Y 400 MET ALA LYS GLN PRO GLY LEU ASP PHE GLN SER ALA LYS \ SEQRES 2 Y 400 GLY GLY LEU GLY GLU LEU LYS ARG ARG LEU LEU PHE VAL \ SEQRES 3 Y 400 ILE GLY ALA LEU ILE VAL PHE ARG ILE GLY SER PHE ILE \ SEQRES 4 Y 400 SER ILE PHE ALA LEU GLY ILE MET PRO TYR ILE SER ALA \ SEQRES 5 Y 400 SER ILE ILE ILE GLN LEU LEU THR VAL VAL HIS PRO THR \ SEQRES 6 Y 400 LEU ALA GLU ILE LYS LYS GLU GLY GLU SER GLY ARG ARG \ SEQRES 7 Y 400 LYS ILE SER GLN TYR THR ARG TYR GLY THR LEU VAL LEU \ SEQRES 8 Y 400 ALA ILE PHE GLN SER ILE GLY ILE ALA THR GLY LEU PRO \ SEQRES 9 Y 400 ASN MET PRO GLY MET GLN GLY LEU VAL ILE ASN PRO GLY \ SEQRES 10 Y 400 PHE ALA PHE TYR PHE THR ALA VAL VAL SER LEU VAL THR \ SEQRES 11 Y 400 GLY THR MET PHE LEU MET TRP LEU GLY GLU GLN ILE THR \ SEQRES 12 Y 400 GLU ARG GLY ILE GLY ASN GLY ILE SER ILE ILE ILE PHE \ SEQRES 13 Y 400 ALA GLY ILE VAL ALA GLY LEU PRO PRO ALA ILE ALA HIS \ SEQRES 14 Y 400 THR ILE GLU GLN ALA ARG GLN GLY ASP LEU HIS PHE LEU \ SEQRES 15 Y 400 VAL LEU LEU LEU VAL ALA VAL LEU VAL PHE ALA VAL THR \ SEQRES 16 Y 400 PHE PHE VAL VAL PHE VAL GLU ARG GLY GLN ARG ARG ILE \ SEQRES 17 Y 400 VAL VAL ASN TYR ALA LYS ARG GLN GLN GLY ARG ARG VAL \ SEQRES 18 Y 400 TYR ALA ALA GLN SER THR HIS LEU PRO LEU LYS VAL ASN \ SEQRES 19 Y 400 MET ALA GLY VAL ILE PRO ALA ILE PHE ALA SER SER ILE \ SEQRES 20 Y 400 ILE LEU PHE PRO ALA THR ILE ALA SER TRP PHE GLY GLY \ SEQRES 21 Y 400 GLY THR GLY TRP ASN TRP LEU THR THR ILE SER LEU TYR \ SEQRES 22 Y 400 LEU GLN PRO GLY GLN PRO LEU TYR VAL LEU LEU TYR ALA \ SEQRES 23 Y 400 SER ALA ILE ILE PHE PHE CYS PHE PHE TYR THR ALA LEU \ SEQRES 24 Y 400 VAL PHE ASN PRO ARG GLU THR ALA ASP ASN LEU LYS LYS \ SEQRES 25 Y 400 SER GLY ALA PHE VAL PRO GLY ILE ARG PRO GLY GLU GLN \ SEQRES 26 Y 400 THR ALA LYS TYR ILE ASP LYS VAL MET THR ARG LEU THR \ SEQRES 27 Y 400 LEU VAL GLY ALA LEU TYR ILE THR PHE ILE CYS LEU ILE \ SEQRES 28 Y 400 PRO GLU PHE MET ARG ASP ALA MET LYS VAL PRO PHE TYR \ SEQRES 29 Y 400 PHE GLY GLY THR SER LEU LEU ILE VAL VAL VAL VAL ILE \ SEQRES 30 Y 400 MET ASP PHE MET ALA GLN VAL GLN THR LEU MET MET SER \ SEQRES 31 Y 400 SER GLN TYR GLU SER ALA LEU LYS LYS ALA \ SEQRES 1 Z 111 MET LYS TRP VAL VAL VAL VAL ALA LEU LEU LEU VAL ALA \ SEQRES 2 Z 111 ILE VAL GLY ASN TYR LEU TYR ARG ASP ILE MET LEU PRO \ SEQRES 3 Z 111 LEU ARG ALA LEU ALA VAL VAL ILE LEU ILE ALA ALA ALA \ SEQRES 4 Z 111 GLY GLY VAL ALA LEU LEU THR THR LYS GLY LYS ALA THR \ SEQRES 5 Z 111 VAL ALA PHE ALA ARG GLU ALA ARG THR GLU VAL ARG LYS \ SEQRES 6 Z 111 VAL ILE TRP PRO THR ARG GLN GLU THR LEU HIS THR THR \ SEQRES 7 Z 111 LEU ILE VAL ALA ALA VAL THR ALA VAL MET SER LEU ILE \ SEQRES 8 Z 111 LEU TRP GLY LEU ASP GLY ILE LEU VAL ARG LEU VAL SER \ SEQRES 9 Z 111 PHE ILE THR GLY LEU ARG PHE \ SEQRES 1 A 77 MET TYR GLU ALA LEU LEU VAL VAL PHE LEU ILE VAL ALA \ SEQRES 2 A 77 ILE GLY LEU VAL GLY LEU ILE MET LEU GLN GLN GLY LYS \ SEQRES 3 A 77 GLY ALA ASP MET GLY ALA SER PHE GLY ALA GLY ALA SER \ SEQRES 4 A 77 ALA THR LEU PHE GLY SER SER GLY SER GLY ASN PHE MET \ SEQRES 5 A 77 THR ARG MET THR ALA LEU LEU ALA THR LEU PHE PHE ILE \ SEQRES 6 A 77 ILE SER LEU VAL LEU GLY ASN ILE ASN SER ASN LYS \ SEQRES 1 B 400 MET ALA LYS GLN PRO GLY LEU ASP PHE GLN SER ALA LYS \ SEQRES 2 B 400 GLY GLY LEU GLY GLU LEU LYS ARG ARG LEU LEU PHE VAL \ SEQRES 3 B 400 ILE GLY ALA LEU ILE VAL PHE ARG ILE GLY SER PHE ILE \ SEQRES 4 B 400 SER ILE PHE ALA LEU GLY ILE MET PRO TYR ILE SER ALA \ SEQRES 5 B 400 SER ILE ILE ILE GLN LEU LEU THR VAL VAL HIS PRO THR \ SEQRES 6 B 400 LEU ALA GLU ILE LYS LYS GLU GLY GLU SER GLY ARG ARG \ SEQRES 7 B 400 LYS ILE SER GLN TYR THR ARG TYR GLY THR LEU VAL LEU \ SEQRES 8 B 400 ALA ILE PHE GLN SER ILE GLY ILE ALA THR GLY LEU PRO \ SEQRES 9 B 400 ASN MET PRO GLY MET GLN GLY LEU VAL ILE ASN PRO GLY \ SEQRES 10 B 400 PHE ALA PHE TYR PHE THR ALA VAL VAL SER LEU VAL THR \ SEQRES 11 B 400 GLY THR MET PHE LEU MET TRP LEU GLY GLU GLN ILE THR \ SEQRES 12 B 400 GLU ARG GLY ILE GLY ASN GLY ILE SER ILE ILE ILE PHE \ SEQRES 13 B 400 ALA GLY ILE VAL ALA GLY LEU PRO PRO ALA ILE ALA HIS \ SEQRES 14 B 400 THR ILE GLU GLN ALA ARG GLN GLY ASP LEU HIS PHE LEU \ SEQRES 15 B 400 VAL LEU LEU LEU VAL ALA VAL LEU VAL PHE ALA VAL THR \ SEQRES 16 B 400 PHE PHE VAL VAL PHE VAL GLU ARG GLY GLN ARG ARG ILE \ SEQRES 17 B 400 VAL VAL ASN TYR ALA LYS ARG GLN GLN GLY ARG ARG VAL \ SEQRES 18 B 400 TYR ALA ALA GLN SER THR HIS LEU PRO LEU LYS VAL ASN \ SEQRES 19 B 400 MET ALA GLY VAL ILE PRO ALA ILE PHE ALA SER SER ILE \ SEQRES 20 B 400 ILE LEU PHE PRO ALA THR ILE ALA SER TRP PHE GLY GLY \ SEQRES 21 B 400 GLY THR GLY TRP ASN TRP LEU THR THR ILE SER LEU TYR \ SEQRES 22 B 400 LEU GLN PRO GLY GLN PRO LEU TYR VAL LEU LEU TYR ALA \ SEQRES 23 B 400 SER ALA ILE ILE PHE PHE CYS PHE PHE TYR THR ALA LEU \ SEQRES 24 B 400 VAL PHE ASN PRO ARG GLU THR ALA ASP ASN LEU LYS LYS \ SEQRES 25 B 400 SER GLY ALA PHE VAL PRO GLY ILE ARG PRO GLY GLU GLN \ SEQRES 26 B 400 THR ALA LYS TYR ILE ASP LYS VAL MET THR ARG LEU THR \ SEQRES 27 B 400 LEU VAL GLY ALA LEU TYR ILE THR PHE ILE CYS LEU ILE \ SEQRES 28 B 400 PRO GLU PHE MET ARG ASP ALA MET LYS VAL PRO PHE TYR \ SEQRES 29 B 400 PHE GLY GLY THR SER LEU LEU ILE VAL VAL VAL VAL ILE \ SEQRES 30 B 400 MET ASP PHE MET ALA GLN VAL GLN THR LEU MET MET SER \ SEQRES 31 B 400 SER GLN TYR GLU SER ALA LEU LYS LYS ALA \ SEQRES 1 C 111 MET LYS TRP VAL VAL VAL VAL ALA LEU LEU LEU VAL ALA \ SEQRES 2 C 111 ILE VAL GLY ASN TYR LEU TYR ARG ASP ILE MET LEU PRO \ SEQRES 3 C 111 LEU ARG ALA LEU ALA VAL VAL ILE LEU ILE ALA ALA ALA \ SEQRES 4 C 111 GLY GLY VAL ALA LEU LEU THR THR LYS GLY LYS ALA THR \ SEQRES 5 C 111 VAL ALA PHE ALA ARG GLU ALA ARG THR GLU VAL ARG LYS \ SEQRES 6 C 111 VAL ILE TRP PRO THR ARG GLN GLU THR LEU HIS THR THR \ SEQRES 7 C 111 LEU ILE VAL ALA ALA VAL THR ALA VAL MET SER LEU ILE \ SEQRES 8 C 111 LEU TRP GLY LEU ASP GLY ILE LEU VAL ARG LEU VAL SER \ SEQRES 9 C 111 PHE ILE THR GLY LEU ARG PHE \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 78 LYS X 77 \ TER 479 ALA Y 436 \ ATOM 480 CA MET Z 17 124.740 30.977 -12.308 1.00 15.00 C \ ATOM 481 CA LYS Z 18 126.575 28.276 -10.323 1.00 15.00 C \ ATOM 482 CA TRP Z 19 129.655 28.190 -12.584 1.00 15.00 C \ ATOM 483 CA VAL Z 20 130.185 31.956 -12.719 1.00 15.00 C \ ATOM 484 CA VAL Z 21 131.126 32.506 -9.062 1.00 15.00 C \ ATOM 485 CA VAL Z 22 133.965 29.949 -9.159 1.00 15.00 C \ ATOM 486 CA VAL Z 23 135.732 31.839 -11.973 1.00 15.00 C \ ATOM 487 CA ALA Z 24 135.376 35.225 -10.247 1.00 15.00 C \ ATOM 488 CA LEU Z 25 137.416 33.862 -7.332 1.00 15.00 C \ ATOM 489 CA LEU Z 26 140.361 33.261 -9.676 1.00 15.00 C \ ATOM 490 CA LEU Z 27 139.975 36.741 -11.202 1.00 15.00 C \ ATOM 491 CA VAL Z 28 141.007 38.335 -7.895 1.00 15.00 C \ ATOM 492 CA ALA Z 29 143.695 35.740 -7.137 1.00 15.00 C \ ATOM 493 CA ILE Z 30 145.525 36.158 -10.457 1.00 15.00 C \ ATOM 494 CA VAL Z 31 145.764 39.934 -9.966 1.00 15.00 C \ ATOM 495 CA GLY Z 32 146.605 39.564 -6.278 1.00 15.00 C \ ATOM 496 CA ASN Z 33 149.714 37.429 -6.767 1.00 15.00 C \ ATOM 497 CA TYR Z 34 151.034 40.047 -9.209 1.00 15.00 C \ ATOM 498 CA LEU Z 35 152.047 42.174 -6.206 1.00 15.00 C \ ATOM 499 CA TYR Z 36 154.818 40.127 -4.566 1.00 15.00 C \ ATOM 500 CA ARG Z 37 156.208 37.018 -6.267 1.00 15.00 C \ ATOM 501 CA ASP Z 38 159.977 36.676 -6.801 1.00 15.00 C \ ATOM 502 CA ILE Z 39 161.159 38.361 -3.590 1.00 15.00 C \ ATOM 503 CA MET Z 40 161.080 35.729 -0.814 1.00 15.00 C \ ATOM 504 CA LEU Z 41 160.568 36.322 2.930 1.00 15.00 C \ ATOM 505 CA PRO Z 42 156.777 36.632 3.548 1.00 15.00 C \ ATOM 506 CA LEU Z 43 154.846 38.668 6.143 1.00 15.00 C \ ATOM 507 CA ARG Z 44 154.069 42.169 4.873 1.00 15.00 C \ ATOM 508 CA ALA Z 45 151.035 44.479 4.806 1.00 15.00 C \ ATOM 509 CA LEU Z 46 149.334 47.523 3.231 1.00 15.00 C \ ATOM 510 CA ALA Z 47 149.625 45.938 -0.224 1.00 15.00 C \ ATOM 511 CA VAL Z 48 148.204 42.423 -0.590 1.00 15.00 C \ ATOM 512 CA VAL Z 49 145.905 42.876 2.427 1.00 15.00 C \ ATOM 513 CA ILE Z 50 143.621 44.983 0.213 1.00 15.00 C \ ATOM 514 CA LEU Z 51 142.874 41.921 -1.934 1.00 15.00 C \ ATOM 515 CA ILE Z 52 142.287 39.719 1.127 1.00 15.00 C \ ATOM 516 CA ALA Z 53 139.537 42.091 2.291 1.00 15.00 C \ ATOM 517 CA ALA Z 54 137.748 41.828 -1.065 1.00 15.00 C \ ATOM 518 CA ALA Z 55 137.041 38.133 -0.435 1.00 15.00 C \ ATOM 519 CA GLY Z 56 134.091 39.201 1.707 1.00 15.00 C \ ATOM 520 CA GLY Z 57 132.263 41.599 -0.583 1.00 15.00 C \ ATOM 521 CA VAL Z 58 131.993 39.836 -3.946 1.00 15.00 C \ ATOM 522 CA ALA Z 59 132.637 36.145 -3.234 1.00 15.00 C \ ATOM 523 CA LEU Z 60 129.814 35.997 -0.687 1.00 15.00 C \ ATOM 524 CA LEU Z 61 127.040 37.814 -2.546 1.00 15.00 C \ ATOM 525 CA THR Z 62 127.020 35.502 -5.582 1.00 15.00 C \ ATOM 526 CA THR Z 63 125.443 36.546 -8.903 1.00 15.00 C \ ATOM 527 CA LYS Z 64 122.275 34.703 -7.812 1.00 15.00 C \ ATOM 528 CA GLY Z 65 121.953 32.117 -5.029 1.00 15.00 C \ ATOM 529 CA LYS Z 66 118.304 31.504 -5.933 1.00 15.00 C \ ATOM 530 CA ALA Z 67 116.427 32.976 -2.940 1.00 15.00 C \ ATOM 531 CA THR Z 68 114.569 36.014 -4.313 1.00 15.00 C \ ATOM 532 CA VAL Z 69 116.921 38.747 -5.677 1.00 15.00 C \ ATOM 533 CA ALA Z 70 120.797 38.558 -5.346 1.00 15.00 C \ ATOM 534 CA PHE Z 71 122.462 39.559 -2.020 1.00 15.00 C \ ATOM 535 CA ALA Z 72 123.179 43.332 -2.398 1.00 15.00 C \ ATOM 536 CA ARG Z 73 120.741 44.459 0.417 1.00 15.00 C \ ATOM 537 CA GLU Z 74 121.429 45.094 4.138 1.00 15.00 C \ ATOM 538 CA ALA Z 75 121.741 41.989 6.383 1.00 15.00 C \ ATOM 539 CA ARG Z 76 121.401 43.455 9.869 1.00 15.00 C \ ATOM 540 CA THR Z 77 117.977 45.128 9.693 1.00 15.00 C \ ATOM 541 CA GLU Z 78 115.729 42.100 9.197 1.00 15.00 C \ ATOM 542 CA VAL Z 79 117.298 40.324 12.182 1.00 15.00 C \ ATOM 543 CA ARG Z 80 114.963 42.015 14.679 1.00 15.00 C \ ATOM 544 CA LYS Z 81 112.047 41.189 12.376 1.00 15.00 C \ ATOM 545 CA VAL Z 82 112.357 37.457 13.099 1.00 15.00 C \ ATOM 546 CA ILE Z 83 112.440 38.005 16.862 1.00 15.00 C \ ATOM 547 CA TRP Z 84 109.207 40.023 16.931 1.00 15.00 C \ ATOM 548 CA PRO Z 85 106.383 37.868 18.404 1.00 15.00 C \ ATOM 549 CA THR Z 86 108.420 37.551 21.623 1.00 15.00 C \ ATOM 550 CA ARG Z 87 106.763 38.716 24.865 1.00 15.00 C \ ATOM 551 CA GLN Z 88 108.382 40.644 27.737 1.00 15.00 C \ ATOM 552 CA GLU Z 89 108.270 38.341 30.779 1.00 15.00 C \ ATOM 553 CA THR Z 90 106.539 35.183 31.977 1.00 15.00 C \ ATOM 554 CA LEU Z 91 106.947 33.965 35.584 1.00 15.00 C \ ATOM 555 CA HIS Z 92 103.635 32.160 35.064 1.00 15.00 C \ ATOM 556 CA THR Z 93 104.926 28.831 33.554 1.00 15.00 C \ ATOM 557 CA THR Z 94 108.025 28.896 35.757 1.00 15.00 C \ ATOM 558 CA LEU Z 95 106.210 27.350 38.783 1.00 15.00 C \ ATOM 559 CA ILE Z 96 105.753 24.254 36.578 1.00 15.00 C \ ATOM 560 CA VAL Z 97 108.794 23.196 34.435 1.00 15.00 C \ ATOM 561 CA ALA Z 98 111.201 24.323 37.183 1.00 15.00 C \ ATOM 562 CA ALA Z 99 109.964 22.908 40.470 1.00 15.00 C \ ATOM 563 CA VAL Z 100 110.657 19.179 40.003 1.00 15.00 C \ ATOM 564 CA THR Z 101 114.392 19.830 40.403 1.00 15.00 C \ ATOM 565 CA ALA Z 102 114.209 20.358 44.179 1.00 15.00 C \ ATOM 566 CA VAL Z 103 112.961 16.754 44.131 1.00 15.00 C \ ATOM 567 CA MET Z 104 114.151 14.462 41.304 1.00 15.00 C \ ATOM 568 CA SER Z 105 117.616 16.065 41.402 1.00 15.00 C \ ATOM 569 CA LEU Z 106 118.284 15.407 45.093 1.00 15.00 C \ ATOM 570 CA ILE Z 107 117.186 11.763 44.758 1.00 15.00 C \ ATOM 571 CA LEU Z 108 119.685 10.674 42.097 1.00 15.00 C \ ATOM 572 CA TRP Z 109 122.465 12.539 43.910 1.00 15.00 C \ ATOM 573 CA GLY Z 110 121.092 11.133 47.161 1.00 15.00 C \ ATOM 574 CA LEU Z 111 122.085 7.616 46.116 1.00 15.00 C \ ATOM 575 CA ASP Z 112 125.685 8.458 45.203 1.00 15.00 C \ ATOM 576 CA GLY Z 113 126.871 10.024 48.451 1.00 15.00 C \ ATOM 577 CA ILE Z 114 124.838 8.542 51.296 1.00 15.00 C \ ATOM 578 CA LEU Z 115 125.669 5.022 50.089 1.00 15.00 C \ ATOM 579 CA VAL Z 116 128.659 5.038 47.710 1.00 15.00 C \ ATOM 580 CA ARG Z 117 130.649 7.704 49.569 1.00 15.00 C \ ATOM 581 CA LEU Z 118 129.784 5.648 52.658 1.00 15.00 C \ ATOM 582 CA VAL Z 119 131.038 2.201 51.586 1.00 15.00 C \ ATOM 583 CA SER Z 120 134.688 3.218 51.129 1.00 15.00 C \ ATOM 584 CA PHE Z 121 134.458 4.865 54.557 1.00 15.00 C \ ATOM 585 CA ILE Z 122 133.495 1.583 56.244 1.00 15.00 C \ ATOM 586 CA THR Z 123 135.761 -0.929 54.486 1.00 15.00 C \ ATOM 587 CA GLY Z 124 138.950 1.106 54.820 1.00 15.00 C \ ATOM 588 CA LEU Z 125 139.376 1.718 58.546 1.00 15.00 C \ ATOM 589 CA ARG Z 126 139.138 -1.940 59.592 1.00 15.00 C \ ATOM 590 CA PHE Z 127 141.986 -4.428 58.944 1.00 15.00 C \ TER 591 PHE Z 127 \ TER 669 LYS A 77 \ TER 1070 ALA B 436 \ TER 1182 PHE C 127 \ MASTER 107 0 0 0 0 0 0 6 1176 6 0 92 \ END \ """, "2akichainZ") cmd.hide("all") cmd.color('grey70', "2akichainZ") cmd.show('cartoon', "2akichainZ") cmd.center("2akichainZ", state=0, origin=1) cmd.zoom("2akichainZ", animate=-1) cmd.select("e2akiZ1", "c. Z & i. 17-127") cmd.color("red", "e2akiZ1") cmd.disable("e2akiZ1")