cmd.read_pdbstr("""\ HEADER RIBOSOME 16-MAR-00 1EMI \ TITLE STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8. \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: 16S RIBOSOMAL RNA; \ COMPND 3 CHAIN: B; \ COMPND 4 OTHER_DETAILS: COORDINATES FOR THERMUS THERMOPHILUS 16S RRNA BUT \ COMPND 5 SEQUENCE AND NUMBERING IS THAT OF E.COLI 16S RRNA; \ COMPND 6 MOL_ID: 2; \ COMPND 7 MOLECULE: RIBOSOMAL PROTEIN S8; \ COMPND 8 CHAIN: A \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 3 ORGANISM_TAXID: 274; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; \ SOURCE 6 ORGANISM_TAXID: 274 \ KEYWDS RNA, RRNA, RIBOSOME, RIBOSOMAL PROTEIN, 16S RRNA, S8 \ EXPDTA X-RAY DIFFRACTION \ MDLTYP CA ATOMS ONLY, CHAIN A; P ATOMS ONLY, CHAIN B \ AUTHOR L.LANCASTER,G.M.CULVER,G.Z.YUSUPOVA,J.H.CATE,M.M.YUSPOV,H.F.NOLLER \ REVDAT 5 07-FEB-24 1EMI 1 REMARK \ REVDAT 4 24-FEB-09 1EMI 1 VERSN \ REVDAT 3 01-APR-03 1EMI 1 JRNL \ REVDAT 2 19-JUN-00 1EMI 3 SCALE1 SCALE2 SCALE3 REMARK \ REVDAT 1 12-JUN-00 1EMI 0 \ JRNL AUTH L.LANCASTER,G.M.CULVER,G.Z.YUSUPOVA,J.H.CATE,M.M.YUSUPOV, \ JRNL AUTH 2 H.F.NOLLER \ JRNL TITL THE LOCATION OF PROTEIN S8 AND SURROUNDING ELEMENTS OF 16S \ JRNL TITL 2 RRNA IN THE 70S RIBOSOME FROM COMBINED USE OF DIRECTED \ JRNL TITL 3 HYDROXYL RADICAL PROBING AND X-RAY CRYSTALLOGRAPHY. \ JRNL REF RNA V. 6 717 2000 \ JRNL REFN ISSN 1355-8382 \ JRNL PMID 10836793 \ JRNL DOI 10.1017/S1355838200000303 \ REMARK 2 \ REMARK 2 RESOLUTION. 7.50 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 PROGRAM : CNS \ REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- \ REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, \ REMARK 3 : READ,RICE,SIMONSON,WARREN \ REMARK 3 \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 \ REMARK 3 DATA USED IN REFINEMENT. \ REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 7.50 \ REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL \ REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL \ REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL \ REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL \ REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL \ REMARK 3 NUMBER OF REFLECTIONS : NULL \ REMARK 3 \ REMARK 3 FIT TO DATA USED IN REFINEMENT. \ REMARK 3 CROSS-VALIDATION METHOD : NULL \ REMARK 3 FREE R VALUE TEST SET SELECTION : NULL \ REMARK 3 R VALUE (WORKING SET) : NULL \ REMARK 3 FREE R VALUE : NULL \ REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 FREE R VALUE TEST SET COUNT : NULL \ REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL \ REMARK 3 \ REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. \ REMARK 3 TOTAL NUMBER OF BINS USED : NULL \ REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL \ REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL \ REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL \ REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL \ REMARK 3 BIN R VALUE (WORKING SET) : NULL \ REMARK 3 BIN FREE R VALUE : NULL \ REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL \ REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL \ REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL \ REMARK 3 \ REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. \ REMARK 3 PROTEIN ATOMS : 136 \ REMARK 3 NUCLEIC ACID ATOMS : 161 \ REMARK 3 HETEROGEN ATOMS : 0 \ REMARK 3 SOLVENT ATOMS : 0 \ REMARK 3 \ REMARK 3 B VALUES. \ REMARK 3 FROM WILSON PLOT (A**2) : NULL \ REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE. \ REMARK 3 B11 (A**2) : NULL \ REMARK 3 B22 (A**2) : NULL \ REMARK 3 B33 (A**2) : NULL \ REMARK 3 B12 (A**2) : NULL \ REMARK 3 B13 (A**2) : NULL \ REMARK 3 B23 (A**2) : NULL \ REMARK 3 \ REMARK 3 ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM SIGMAA (A) : NULL \ REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL \ REMARK 3 \ REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. \ REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL \ REMARK 3 ESD FROM C-V SIGMAA (A) : NULL \ REMARK 3 \ REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. \ REMARK 3 BOND LENGTHS (A) : NULL \ REMARK 3 BOND ANGLES (DEGREES) : NULL \ REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL \ REMARK 3 IMPROPER ANGLES (DEGREES) : NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL MODEL : NULL \ REMARK 3 \ REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA \ REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL \ REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 BULK SOLVENT MODELING. \ REMARK 3 METHOD USED : NULL \ REMARK 3 KSOL : NULL \ REMARK 3 BSOL : NULL \ REMARK 3 \ REMARK 3 NCS MODEL : NULL \ REMARK 3 \ REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT \ REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL \ REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL \ REMARK 3 \ REMARK 3 PARAMETER FILE 1 : NULL \ REMARK 3 TOPOLOGY FILE 1 : NULL \ REMARK 3 \ REMARK 3 OTHER REFINEMENT REMARKS: \ REMARK 3 ALL DATA COLLECTION PARAMETERS ARE AS REPORTED FOR 486D. THE RNA \ REMARK 3 MODEL FOR THE S8 REGION OF 16S RRNA WAS BUILT MANUALLY BY FITTING \ REMARK 3 TO \ REMARK 3 THE 7.8 A X-RAY MAP OF THE THERMUS THERMOPHILUS 70S RIBOSOME (CATE \ REMARK 3 ET \ REMARK 3 AL., SCIENCE 285, 2095-2104, 1999; SEE PDB 486D) USING A SINGLE P \ REMARK 3 PSEUDOATOM FOR EACH NUCLEOTIDE. NOTE THAT THE NUCLEOTIDE NUMBERING \ REMARK 3 CORRESPONDS TO THE NUCLEOTIDE POSITIONS OF E.COLI 16S RRNA. \ REMARK 3 \ REMARK 3 PROTEIN S8 FROM THERMUS THERMOPHILUS (PDB 1AN7) WAS FITTED TO THE \ REMARK 3 7.8 \ REMARK 3 A MAP OF THE THERMUS THERMOPHILUS 70S RIBOSOME BY SPLITTING THE \ REMARK 3 PROTEIN INTO N- AND C-TERMINAL DOMAINS BETWEEN RESIDUES 80 AND 81. \ REMARK 3 THE TWO DOMAINS WERE FIT SEPARATELY, RESULTING IN A SMALL RELATIVE \ REMARK 3 MOVEMENT COMPARED WITH THE ORIGINAL X-RAY STRUCTURE. ONLY C-ALPHA \ REMARK 3 POSITIONS ARE GIVEN IN THE PDB FILE. \ REMARK 4 \ REMARK 4 1EMI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-00. \ REMARK 100 THE DEPOSITION ID IS D_1000010724. \ REMARK 200 \ REMARK 200 EXPERIMENTAL DETAILS \ REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION \ REMARK 200 DATE OF DATA COLLECTION : NULL \ REMARK 200 TEMPERATURE (KELVIN) : 105 \ REMARK 200 PH : NULL \ REMARK 200 NUMBER OF CRYSTALS USED : 5 \ REMARK 200 \ REMARK 200 SYNCHROTRON (Y/N) : Y \ REMARK 200 RADIATION SOURCE : ALS \ REMARK 200 BEAMLINE : NULL \ REMARK 200 X-RAY GENERATOR MODEL : NULL \ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M \ REMARK 200 WAVELENGTH OR RANGE (A) : 1.1051 \ REMARK 200 MONOCHROMATOR : NULL \ REMARK 200 OPTICS : NULL \ REMARK 200 \ REMARK 200 DETECTOR TYPE : CCD \ REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 \ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO \ REMARK 200 DATA SCALING SOFTWARE : SCALEPACK \ REMARK 200 \ REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL \ REMARK 200 RESOLUTION RANGE HIGH (A) : 7.500 \ REMARK 200 RESOLUTION RANGE LOW (A) : NULL \ REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL \ REMARK 200 \ REMARK 200 OVERALL. \ REMARK 200 COMPLETENESS FOR RANGE (%) : NULL \ REMARK 200 DATA REDUNDANCY : NULL \ REMARK 200 R MERGE (I) : NULL \ REMARK 200 R SYM (I) : NULL \ REMARK 200 FOR THE DATA SET : NULL \ REMARK 200 \ REMARK 200 IN THE HIGHEST RESOLUTION SHELL. \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL \ REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL \ REMARK 200 COMPLETENESS FOR SHELL (%) : NULL \ REMARK 200 DATA REDUNDANCY IN SHELL : NULL \ REMARK 200 R MERGE FOR SHELL (I) : NULL \ REMARK 200 R SYM FOR SHELL (I) : NULL \ REMARK 200 FOR SHELL : NULL \ REMARK 200 \ REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH \ REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL \ REMARK 200 SOFTWARE USED: MLPHARE \ REMARK 200 STARTING MODEL: NULL \ REMARK 200 \ REMARK 200 REMARK: NULL \ REMARK 280 \ REMARK 280 CRYSTAL \ REMARK 280 SOLVENT CONTENT, VS (%): NULL \ REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL \ REMARK 280 \ REMARK 280 CRYSTALLIZATION CONDITIONS: NULL \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY \ REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 \ REMARK 290 \ REMARK 290 SYMOP SYMMETRY \ REMARK 290 NNNMMM OPERATOR \ REMARK 290 1555 X,Y,Z \ REMARK 290 2555 -X,-Y,Z \ REMARK 290 3555 -Y,X,Z \ REMARK 290 4555 Y,-X,Z \ REMARK 290 5555 -X,Y,-Z \ REMARK 290 6555 X,-Y,-Z \ REMARK 290 7555 Y,X,-Z \ REMARK 290 8555 -Y,-X,-Z \ REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 \ REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 \ REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 \ REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 \ REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 \ REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 \ REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 \ REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 \ REMARK 290 \ REMARK 290 WHERE NNN -> OPERATOR NUMBER \ REMARK 290 MMM -> TRANSLATION VECTOR \ REMARK 290 \ REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS \ REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM \ REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY \ REMARK 290 RELATED MOLECULES. \ REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 \ REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 \ REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 \ REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 \ REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 401.50000 \ REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 401.50000 \ REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 401.50000 \ REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 401.50000 \ REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 401.50000 \ REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 401.50000 \ REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 401.50000 \ REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 254.00000 \ REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 254.00000 \ REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 401.50000 \ REMARK 290 \ REMARK 290 REMARK: NULL \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 486D RELATED DB: PDB \ REMARK 900 X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES \ DBREF 1EMI A 3 138 UNP Q5SHQ2 RS8_THET8 3 138 \ DBREF 1EMI B 577 879 PDB 1EMI 1EMI 577 879 \ SEQADV 1EMI ASP A 25 UNP Q5SHQ2 GLU 25 CONFLICT \ SEQADV 1EMI ARG A 37 UNP Q5SHQ2 LYS 37 CONFLICT \ SEQADV 1EMI ASP A 52 UNP Q5SHQ2 GLU 52 CONFLICT \ SEQADV 1EMI VAL A 61 UNP Q5SHQ2 ILE 61 CONFLICT \ SEQADV 1EMI TYR A 62 UNP Q5SHQ2 HIS 62 CONFLICT \ SEQADV 1EMI HIS A 81 UNP Q5SHQ2 LYS 81 CONFLICT \ SEQADV 1EMI LYS A 88 UNP Q5SHQ2 ARG 88 CONFLICT \ SEQADV 1EMI SER A 115 UNP Q5SHQ2 PRO 115 CONFLICT \ SEQRES 1 B 161 G C A C G C A G G C G G U \ SEQRES 2 B 161 U U G U U A A G U C A G A \ SEQRES 3 B 161 U G U G A A A U C C C C G \ SEQRES 4 B 161 G G C U C A A C C U G G G \ SEQRES 5 B 161 A A C U G C A U C U G A U \ SEQRES 6 B 161 A C U G G C A A G C U U G \ SEQRES 7 B 161 A G U C U C G U A C G A A \ SEQRES 8 B 161 G A C U G A C G C U C A G \ SEQRES 9 B 161 G U G C G U C G A C U U G \ SEQRES 10 B 161 G A G G U U G U G C U U C \ SEQRES 11 B 161 G U G G C U U C C G G A G \ SEQRES 12 B 161 C U A A C G C G U U A A G \ SEQRES 13 B 161 U C G A C \ SEQRES 1 A 136 THR ASP PRO ILE ALA ASP MET LEU THR ARG ILE ARG ASN \ SEQRES 2 A 136 ALA THR ARG VAL TYR LYS GLU SER THR ASP VAL PRO ALA \ SEQRES 3 A 136 SER ARG PHE LYS GLU GLU ILE LEU ARG ILE LEU ALA ARG \ SEQRES 4 A 136 GLU GLY PHE ILE LYS GLY TYR GLU ARG VAL ASP VAL ASP \ SEQRES 5 A 136 GLY LYS PRO TYR LEU ARG VAL TYR LEU LYS TYR GLY PRO \ SEQRES 6 A 136 ARG ARG GLN GLY PRO ASP PRO ARG PRO GLU GLN VAL ILE \ SEQRES 7 A 136 HIS HIS ILE ARG ARG ILE SER LYS PRO GLY ARG ARG VAL \ SEQRES 8 A 136 TYR VAL GLY VAL LYS GLU ILE PRO ARG VAL ARG ARG GLY \ SEQRES 9 A 136 LEU GLY ILE ALA ILE LEU SER THR SER LYS GLY VAL LEU \ SEQRES 10 A 136 THR ASP ARG GLU ALA ARG LYS LEU GLY VAL GLY GLY GLU \ SEQRES 11 A 136 LEU ILE CYS GLU VAL TRP \ CRYST1 508.000 508.000 803.000 90.00 90.00 90.00 I 4 2 2 16 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 0.001969 0.000000 0.000000 0.00000 \ SCALE2 0.000000 0.001969 0.000000 0.00000 \ SCALE3 0.000000 0.000000 0.001245 0.00000 \ TER 162 C B 879 \ ATOM 163 CA THR A 3 -8.954 72.489 340.223 1.00 90.68 C \ ATOM 164 CA ASP A 4 -12.339 70.960 339.731 1.00 35.73 C \ ATOM 165 CA PRO A 5 -11.921 67.188 340.373 1.00 32.27 C \ ATOM 166 CA ILE A 6 -15.494 66.453 339.324 1.00 11.08 C \ ATOM 167 CA ALA A 7 -15.003 68.159 335.911 1.00 18.44 C \ ATOM 168 CA ASP A 8 -11.771 66.364 335.566 1.00 22.87 C \ ATOM 169 CA MET A 9 -13.444 62.976 336.214 1.00 13.44 C \ ATOM 170 CA LEU A 10 -16.258 63.711 333.630 1.00 2.00 C \ ATOM 171 CA THR A 11 -13.756 64.756 331.012 1.00 20.85 C \ ATOM 172 CA ARG A 12 -11.699 61.575 331.734 1.00 9.57 C \ ATOM 173 CA ILE A 13 -14.850 59.500 331.263 1.00 3.12 C \ ATOM 174 CA ARG A 14 -16.150 61.303 328.049 1.00 3.43 C \ ATOM 175 CA ASN A 15 -12.634 61.109 326.572 1.00 14.26 C \ ATOM 176 CA ALA A 16 -12.221 57.418 327.209 1.00 21.31 C \ ATOM 177 CA THR A 17 -15.611 56.706 325.462 1.00 14.80 C \ ATOM 178 CA ARG A 18 -14.600 58.738 322.473 1.00 12.88 C \ ATOM 179 CA VAL A 19 -11.785 56.306 321.869 1.00 12.84 C \ ATOM 180 CA TYR A 20 -13.756 53.174 322.808 1.00 14.83 C \ ATOM 181 CA LYS A 21 -11.756 52.228 325.994 1.00 3.85 C \ ATOM 182 CA GLU A 22 -12.899 49.495 328.353 1.00 16.98 C \ ATOM 183 CA SER A 23 -12.136 51.598 331.480 1.00 17.88 C \ ATOM 184 CA THR A 24 -10.631 54.630 333.072 1.00 3.53 C \ ATOM 185 CA ASP A 25 -9.217 55.303 336.533 1.00 18.02 C \ ATOM 186 CA VAL A 26 -9.906 58.532 338.321 1.00 3.04 C \ ATOM 187 CA PRO A 27 -8.382 59.333 341.752 1.00 9.15 C \ ATOM 188 CA ALA A 28 -10.696 57.973 344.437 1.00 7.28 C \ ATOM 189 CA SER A 29 -13.059 60.190 346.525 1.00 2.00 C \ ATOM 190 CA ARG A 30 -16.390 59.562 348.328 1.00 29.91 C \ ATOM 191 CA PHE A 31 -18.157 62.225 346.320 1.00 26.46 C \ ATOM 192 CA LYS A 32 -16.799 60.968 342.995 1.00 11.45 C \ ATOM 193 CA GLU A 33 -17.869 57.403 344.135 1.00 20.61 C \ ATOM 194 CA GLU A 34 -21.463 58.477 344.628 1.00 31.88 C \ ATOM 195 CA ILE A 35 -21.636 60.259 341.189 1.00 18.47 C \ ATOM 196 CA LEU A 36 -20.345 56.930 339.734 1.00 8.71 C \ ATOM 197 CA ARG A 37 -22.871 55.088 341.817 1.00 15.46 C \ ATOM 198 CA ILE A 38 -25.663 57.071 339.945 1.00 22.30 C \ ATOM 199 CA LEU A 39 -24.119 56.883 336.455 1.00 25.09 C \ ATOM 200 CA ALA A 40 -23.916 53.074 336.962 1.00 24.03 C \ ATOM 201 CA ARG A 41 -27.545 52.634 338.263 1.00 27.04 C \ ATOM 202 CA GLU A 42 -28.861 54.823 335.376 1.00 29.41 C \ ATOM 203 CA GLY A 43 -27.037 52.865 332.662 1.00 2.75 C \ ATOM 204 CA PHE A 44 -24.279 55.291 331.571 1.00 6.35 C \ ATOM 205 CA ILE A 45 -21.430 53.120 332.692 1.00 3.23 C \ ATOM 206 CA LYS A 46 -21.179 49.327 333.352 1.00 9.20 C \ ATOM 207 CA GLY A 47 -19.858 49.952 336.880 1.00 21.74 C \ ATOM 208 CA TYR A 48 -16.779 50.923 338.888 1.00 6.46 C \ ATOM 209 CA GLU A 49 -14.410 49.287 341.295 1.00 23.71 C \ ATOM 210 CA ARG A 50 -12.020 50.644 343.872 1.00 25.86 C \ ATOM 211 CA VAL A 51 -8.334 50.049 342.915 1.00 14.55 C \ ATOM 212 CA ASP A 52 -5.150 50.777 344.895 1.00 16.49 C \ ATOM 213 CA VAL A 53 -2.269 51.210 342.640 1.00 28.01 C \ ATOM 214 CA ASP A 54 0.997 51.518 344.606 1.00 23.07 C \ ATOM 215 CA GLY A 55 -0.758 52.939 347.686 1.00 28.10 C \ ATOM 216 CA LYS A 56 -2.865 55.506 345.907 1.00 20.92 C \ ATOM 217 CA PRO A 57 -6.626 54.968 345.772 1.00 21.77 C \ ATOM 218 CA TYR A 58 -8.275 55.084 342.429 1.00 12.66 C \ ATOM 219 CA LEU A 59 -11.736 54.321 341.166 1.00 21.40 C \ ATOM 220 CA ARG A 60 -11.797 52.284 337.953 1.00 10.28 C \ ATOM 221 CA VAL A 61 -14.789 53.041 335.831 1.00 12.90 C \ ATOM 222 CA TYR A 62 -15.924 50.323 333.396 1.00 2.10 C \ ATOM 223 CA LEU A 63 -17.247 52.018 330.327 1.00 3.43 C \ ATOM 224 CA LYS A 64 -20.416 50.846 328.523 1.00 15.34 C \ ATOM 225 CA TYR A 65 -21.070 50.776 324.809 1.00 12.05 C \ ATOM 226 CA GLY A 66 -24.348 50.290 322.976 1.00 34.60 C \ ATOM 227 CA PRO A 67 -25.179 48.150 319.923 1.00 59.92 C \ ATOM 228 CA ARG A 68 -23.222 47.760 316.691 1.00 77.96 C \ ATOM 229 CA ARG A 69 -24.004 50.247 314.127 1.00 69.64 C \ ATOM 230 CA GLN A 70 -26.668 49.885 311.582 1.00 93.34 C \ ATOM 231 CA GLY A 71 -24.429 48.648 308.650 1.00102.28 C \ ATOM 232 CA PRO A 72 -20.510 47.881 308.466 1.00 75.35 C \ ATOM 233 CA ASP A 73 -19.233 50.509 310.671 1.00 41.81 C \ ATOM 234 CA PRO A 74 -17.390 48.694 313.596 1.00 27.31 C \ ATOM 235 CA ARG A 75 -17.843 51.458 316.066 1.00 11.52 C \ ATOM 236 CA PRO A 76 -20.566 50.774 318.679 1.00 6.09 C \ ATOM 237 CA GLU A 77 -23.172 53.208 319.283 1.00 15.35 C \ ATOM 238 CA GLN A 78 -22.227 55.225 322.397 1.00 14.53 C \ ATOM 239 CA VAL A 79 -24.271 55.336 325.691 1.00 8.21 C \ ATOM 240 CA ILE A 80 -22.989 58.646 327.227 1.00 5.91 C \ ATOM 241 CA HIS A 81 -25.498 59.975 325.152 1.00 19.89 C \ ATOM 242 CA HIS A 82 -24.574 63.179 327.070 1.00 22.14 C \ ATOM 243 CA ILE A 83 -22.997 63.369 330.563 1.00 12.20 C \ ATOM 244 CA ARG A 84 -21.919 66.904 331.730 1.00 20.32 C \ ATOM 245 CA ARG A 85 -21.005 69.020 334.802 1.00 18.84 C \ ATOM 246 CA ILE A 86 -22.954 72.071 335.702 1.00 11.42 C \ ATOM 247 CA SER A 87 -21.891 73.258 339.177 1.00 2.00 C \ ATOM 248 CA LYS A 88 -18.085 73.467 339.719 1.00 15.09 C \ ATOM 249 CA PRO A 89 -14.858 74.956 341.123 1.00 26.62 C \ ATOM 250 CA GLY A 90 -15.143 78.598 340.734 1.00 36.62 C \ ATOM 251 CA ARG A 91 -18.507 78.786 339.213 1.00 23.28 C \ ATOM 252 CA ARG A 92 -20.988 76.876 341.483 1.00 6.12 C \ ATOM 253 CA VAL A 93 -24.798 76.402 340.712 1.00 13.20 C \ ATOM 254 CA TYR A 94 -27.442 75.965 343.353 1.00 7.22 C \ ATOM 255 CA VAL A 95 -31.175 75.731 342.828 1.00 11.94 C \ ATOM 256 CA GLY A 96 -34.010 75.478 345.352 1.00 18.29 C \ ATOM 257 CA VAL A 97 -36.966 72.975 345.233 1.00 36.50 C \ ATOM 258 CA LYS A 98 -39.123 75.297 343.075 1.00 51.64 C \ ATOM 259 CA GLU A 99 -36.261 76.038 340.697 1.00 25.86 C \ ATOM 260 CA ILE A 100 -35.187 72.430 339.735 1.00 21.95 C \ ATOM 261 CA PRO A 101 -35.221 72.325 335.920 1.00 17.10 C \ ATOM 262 CA ARG A 102 -36.723 69.584 333.862 1.00 45.81 C \ ATOM 263 CA VAL A 103 -33.686 68.485 331.882 1.00 51.24 C \ ATOM 264 CA ARG A 104 -34.181 67.908 328.112 1.00 47.48 C \ ATOM 265 CA ARG A 105 -37.960 68.253 328.283 1.00 42.74 C \ ATOM 266 CA GLY A 106 -38.286 65.350 330.778 1.00 33.92 C \ ATOM 267 CA LEU A 107 -36.098 63.067 328.660 1.00 28.83 C \ ATOM 268 CA GLY A 108 -32.908 63.505 330.742 1.00 21.76 C \ ATOM 269 CA ILE A 109 -31.929 63.468 334.463 1.00 6.59 C \ ATOM 270 CA ALA A 110 -30.002 65.949 336.550 1.00 14.76 C \ ATOM 271 CA ILE A 111 -28.161 64.837 339.713 1.00 11.97 C \ ATOM 272 CA LEU A 112 -28.361 67.268 342.632 1.00 11.09 C \ ATOM 273 CA SER A 113 -26.297 67.127 345.893 1.00 15.65 C \ ATOM 274 CA THR A 114 -28.945 67.995 348.536 1.00 4.49 C \ ATOM 275 CA SER A 115 -29.403 67.999 352.250 1.00 47.02 C \ ATOM 276 CA LYS A 116 -31.054 64.636 351.995 1.00 41.45 C \ ATOM 277 CA GLY A 117 -28.051 63.356 349.931 1.00 30.60 C \ ATOM 278 CA VAL A 118 -27.394 62.800 346.193 1.00 16.61 C \ ATOM 279 CA LEU A 119 -30.810 62.592 344.582 1.00 18.51 C \ ATOM 280 CA THR A 120 -32.141 62.937 340.982 1.00 6.83 C \ ATOM 281 CA ASP A 121 -34.154 66.013 340.235 1.00 18.76 C \ ATOM 282 CA ARG A 122 -37.269 63.893 340.271 1.00 30.22 C \ ATOM 283 CA GLU A 123 -36.336 62.599 343.748 1.00 27.02 C \ ATOM 284 CA ALA A 124 -35.297 66.044 345.031 1.00 20.92 C \ ATOM 285 CA ARG A 125 -38.603 67.586 344.029 1.00 30.21 C \ ATOM 286 CA LYS A 126 -40.392 64.814 345.817 1.00 40.29 C \ ATOM 287 CA LEU A 127 -38.472 65.186 349.033 1.00 24.39 C \ ATOM 288 CA GLY A 128 -38.931 68.926 348.647 1.00 40.52 C \ ATOM 289 CA VAL A 129 -35.226 69.724 348.480 1.00 36.96 C \ ATOM 290 CA GLY A 130 -33.074 71.770 346.301 1.00 12.26 C \ ATOM 291 CA GLY A 131 -29.288 71.744 346.118 1.00 2.18 C \ ATOM 292 CA GLU A 132 -26.329 71.895 343.831 1.00 10.52 C \ ATOM 293 CA LEU A 133 -26.845 70.795 340.260 1.00 11.17 C \ ATOM 294 CA ILE A 134 -23.880 68.359 339.932 1.00 7.58 C \ ATOM 295 CA CYS A 135 -24.536 67.162 336.297 1.00 19.07 C \ ATOM 296 CA GLU A 136 -27.091 66.387 333.557 1.00 18.72 C \ ATOM 297 CA VAL A 137 -27.304 63.082 331.697 1.00 19.26 C \ ATOM 298 CA TRP A 138 -29.423 61.353 329.051 1.00 12.52 C \ TER 299 TRP A 138 \ MASTER 275 0 0 0 0 0 0 6 297 2 0 24 \ END \ """, "chainA") cmd.hide("all") cmd.color('grey70', "chainA") cmd.show('ribbon', "chainA") cmd.select("e1emiA2", "c. A & i. 67-138") cmd.center("e1emiA2", state=0, origin=1) cmd.zoom("e1emiA2", animate=-1) cmd.show_as('cartoon', "e1emiA2") cmd.spectrum('count', 'rainbow', "e1emiA2") cmd.disable("e1emiA2")