cmd.read_pdbstr("""\ HEADER RIBOSOME 07-APR-08 2VRH \ TITLE STRUCTURE OF THE E. COLI TRIGGER FACTOR BOUND TO A TRANSLATING \ TITLE 2 RIBOSOME \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: TRIGGER FACTOR; \ COMPND 3 CHAIN: A; \ COMPND 4 ENGINEERED: YES; \ COMPND 5 OTHER_DETAILS: BASED ON PDB 1W26_A. RESIDUES 22-62 WERE REPLACED WITH \ COMPND 6 THE CORRESPONDING RESIDUES OF PDB 1OMS_B; \ COMPND 7 MOL_ID: 2; \ COMPND 8 MOLECULE: 50S RIBOSOMAL PROTEIN L23; \ COMPND 9 CHAIN: B; \ COMPND 10 OTHER_DETAILS: BASED ON PDB 2AW4_T; \ COMPND 11 MOL_ID: 3; \ COMPND 12 MOLECULE: 50S RIBOSOMAL PROTEIN L24; \ COMPND 13 CHAIN: C; \ COMPND 14 FRAGMENT: RESIDUES 2-104; \ COMPND 15 OTHER_DETAILS: BASED ON PDB 2AW4_U; \ COMPND 16 MOL_ID: 4; \ COMPND 17 MOLECULE: 50S RIBOSOMAL PROTEIN L29; \ COMPND 18 CHAIN: D; \ COMPND 19 OTHER_DETAILS: BASED ON PDB 2AW4_X \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 3 ORGANISM_TAXID: 562; \ SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; \ SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; \ SOURCE 6 OTHER_DETAILS: BASED ON PDB 1W26_A; \ SOURCE 7 MOL_ID: 2; \ SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 9 ORGANISM_TAXID: 562; \ SOURCE 10 OTHER_DETAILS: BASED ON PDB 2AW4_T; \ SOURCE 11 MOL_ID: 3; \ SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 13 ORGANISM_TAXID: 562; \ SOURCE 14 OTHER_DETAILS: BASED ON PDB 2AW4_U; \ SOURCE 15 MOL_ID: 4; \ SOURCE 16 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 17 ORGANISM_TAXID: 562; \ SOURCE 18 OTHER_DETAILS: BASED ON PDB 2AW4_X \ KEYWDS RIBOSOME, TRIGGER FACTOR, RIBOSOMAL PROTEIN, RIBONUCLEOPROTEIN, CO- \ KEYWDS 2 TRANSLATIONAL PROTEIN FOLDING, ROTAMASE, CHAPERONE, ISOMERASE, CELL \ KEYWDS 3 CYCLE, RNA-BINDING, RRNA-BINDING, CELL DIVISION, RIBOSOME-NASCENT \ KEYWDS 4 CHAIN COMPLEX \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN A, B, C, D \ AUTHOR F.MERZ,D.BOEHRINGER,C.SCHAFFITZEL,S.PREISSLER,A.HOFFMANN,T.MAIER, \ AUTHOR 2 A.RUTKOWSKA,J.LOZZA,N.BAN,B.BUKAU,E.DEUERLING \ REVDAT 7 06-NOV-24 2VRH 1 REMARK \ REVDAT 6 08-MAY-24 2VRH 1 REMARK \ REVDAT 5 23-AUG-17 2VRH 1 REMARK \ REVDAT 4 07-AUG-13 2VRH 1 REMARK CRYST1 SCALE1 SCALE2 \ REVDAT 4 2 1 SCALE3 \ REVDAT 3 14-DEC-11 2VRH 1 REMARK VERSN \ REVDAT 2 24-FEB-09 2VRH 1 VERSN \ REVDAT 1 17-JUN-08 2VRH 0 \ JRNL AUTH F.MERZ,D.BOEHRINGER,C.SCHAFFITZEL,S.PREISSLER,A.HOFFMANN, \ JRNL AUTH 2 T.MAIER,A.RUTKOWSKA,J.LOZZA,N.BAN,B.BUKAU,E.DEUERLING \ JRNL TITL MOLECULAR MECHANISM AND STRUCTURE OF TRIGGER FACTOR BOUND TO \ JRNL TITL 2 THE TRANSLATING RIBOSOME. \ JRNL REF EMBO J. V. 27 1622 2008 \ JRNL REFN ISSN 0261-4189 \ JRNL PMID 18497744 \ JRNL DOI 10.1038/EMBOJ.2008.89 \ REMARK 2 \ REMARK 2 RESOLUTION. 19.00 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : MOLREP, IMAGIC, SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : 2AW4 \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT \ REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 4.233 \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 19.00 \ REMARK 3 NUMBER OF PARTICLES : NULL \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: FITTING OF CRYSTAL STRUCTURES INTO MAP EMD-1499 \ REMARK 4 \ REMARK 4 2VRH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. \ REMARK 100 THE DEPOSITION ID IS D_1290035874. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : STRUCTURE OF THE E. COLI \ REMARK 245 TRIGGER FACTOR BOUND TO A \ REMARK 245 TRANSLATING RIBOSOME \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL \ REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON \ REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID ETHANE \ REMARK 245 SAMPLE BUFFER : 50 MM HEPES-KOH PH 7.5, 100 MM \ REMARK 245 KCL, 25 MM MGCL2, 0.5 MG/ML \ REMARK 245 CHLORAMPHENICOL \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : NULL \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : NULL \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 88.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI 20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL \ REMARK 245 NOMINAL CS : NULL \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 50000 \ REMARK 245 CALIBRATED MAGNIFICATION : 50000 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 ALA A 432 \ REMARK 465 GLU B 100 \ REMARK 465 LYS C 103 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 1P9Y RELATED DB: PDB \ REMARK 900 RIBOSOME BINDING OF E. COLI TRIGGER FACTOR MUTANT F44L. \ REMARK 900 RELATED ID: 2J28 RELATED DB: PDB \ REMARK 900 MODEL OF E. COLI SRP BOUND TO 70S RNCS \ REMARK 900 RELATED ID: 2VHM RELATED DB: PDB \ REMARK 900 STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME \ REMARK 900 RELATED ID: 2WWQ RELATED DB: PDB \ REMARK 900 E.COLI 70S RIBOSOME STALLED DURING TRANSLATION OF TNAC LEADER \ REMARK 900 PEPTIDE \ REMARK 900 RELATED ID: 1P86 RELATED DB: PDB \ REMARK 900 REAL SPACE REFINED COORDINATES OF THE 50S SUBUNIT FITTEDINTO THE \ REMARK 900 LOW RESOLUTION CRYO-EM MAP OF THE INITIATION-LIKESTATE OF E. COLI \ REMARK 900 70S RIBOSOME \ REMARK 900 RELATED ID: 2AW4 RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT \ REMARK 900 3.5 A RESOLUTION. THIS FILE CONTAINSTHE 50S SUBUNIT OF ONE 70S \ REMARK 900 RIBOSOME. THE ENTIRE CRYSTALSTRUCTURE CONTAINS TWO 70S RIBOSOMES \ REMARK 900 AND IS DESCRIBED INREMARK 400. \ REMARK 900 RELATED ID: 1W26 RELATED DB: PDB \ REMARK 900 TRIGGER FACTOR IN COMPLEX WITH THE RIBOSOME FORMS A MOLECULAR \ REMARK 900 CRADLE FOR NASCENT PROTEINS \ REMARK 900 RELATED ID: 1W2B RELATED DB: PDB \ REMARK 900 TRIGGER FACTOR RIBOSOME BINDING DOMAIN IN COMPLEX WITH 50S \ REMARK 900 RELATED ID: 1P85 RELATED DB: PDB \ REMARK 900 REAL SPACE REFINED COORDINATES OF THE 50S SUBUNIT FITTEDINTO THE \ REMARK 900 LOW RESOLUTION CRYO-EM MAP OF THE EF -G.GTP STATEOF E. COLI 70S \ REMARK 900 RIBOSOME \ REMARK 900 RELATED ID: 2VHN RELATED DB: PDB \ REMARK 900 STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME \ REMARK 900 RELATED ID: 1OMS RELATED DB: PDB \ REMARK 900 STRUCTURE DETERMINATION BY MAD: E.COLI TRIGGER FACTORBINDING AT THE \ REMARK 900 RIBOSOMAL EXIT TUNNEL. \ REMARK 900 RELATED ID: 2AWB RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT \ REMARK 900 3.5 A RESOLUTION. THIS FILE CONTAINSTHE 50S SUBUNIT OF THE SECOND \ REMARK 900 70S RIBOSOME. THE ENTIRECRYSTAL STRUCTURE CONTAINS TWO 70S \ REMARK 900 RIBOSOMES AND ISDESCRIBED IN REMARK 400. \ REMARK 900 RELATED ID: 1L1P RELATED DB: PDB \ REMARK 900 SOLUTION STRUCTURE OF THE PPIASE DOMAIN FROM E. COLITRIGGER FACTOR \ REMARK 900 RELATED ID: EMD-1499 RELATED DB: EMDB \ REMARK 900 STRUCTURE OF THE E. COLI TRIGGER FACTOR BOUND TO A TRANSLATING \ REMARK 900 RIBOSOME \ DBREF 2VRH A 1 432 UNP P0A850 TIG_ECOLI 1 432 \ DBREF 2VRH B 1 100 UNP Q0TCE3 RL23_ECOL5 1 100 \ DBREF 2VRH C 1 103 UNP P60624 RL24_ECOLI 2 104 \ DBREF 2VRH D 1 63 UNP P0A7M6 RL29_ECOLI 1 63 \ SEQRES 1 A 432 MSE GLN VAL SER VAL GLU THR THR GLN GLY LEU GLY ARG \ SEQRES 2 A 432 ARG VAL THR ILE THR ILE ALA ALA ASP SER ILE GLU THR \ SEQRES 3 A 432 ALA VAL LYS SER GLU LEU VAL ASN VAL ALA LYS LYS VAL \ SEQRES 4 A 432 ARG ILE ASP GLY PHE ARG LYS GLY LYS VAL PRO MSE ASN \ SEQRES 5 A 432 ILE VAL ALA GLN ARG TYR GLY ALA SER VAL ARG GLN ASP \ SEQRES 6 A 432 VAL LEU GLY ASP LEU MSE SER ARG ASN PHE ILE ASP ALA \ SEQRES 7 A 432 ILE ILE LYS GLU LYS ILE ASN PRO ALA GLY ALA PRO THR \ SEQRES 8 A 432 TYR VAL PRO GLY GLU TYR LYS LEU GLY GLU ASP PHE THR \ SEQRES 9 A 432 TYR SER VAL GLU PHE GLU VAL TYR PRO GLU VAL GLU LEU \ SEQRES 10 A 432 GLN GLY LEU GLU ALA ILE GLU VAL GLU LYS PRO ILE VAL \ SEQRES 11 A 432 GLU VAL THR ASP ALA ASP VAL ASP GLY MSE LEU ASP THR \ SEQRES 12 A 432 LEU ARG LYS GLN GLN ALA THR TRP LYS GLU LYS ASP GLY \ SEQRES 13 A 432 ALA VAL GLU ALA GLU ASP ARG VAL THR ILE ASP PHE THR \ SEQRES 14 A 432 GLY SER VAL ASP GLY GLU GLU PHE GLU GLY GLY LYS ALA \ SEQRES 15 A 432 SER ASP PHE VAL LEU ALA MSE GLY GLN GLY ARG MSE ILE \ SEQRES 16 A 432 PRO GLY PHE GLU ASP GLY ILE LYS GLY HIS LYS ALA GLY \ SEQRES 17 A 432 GLU GLU PHE THR ILE ASP VAL THR PHE PRO GLU GLU TYR \ SEQRES 18 A 432 HIS ALA GLU ASN LEU LYS GLY LYS ALA ALA LYS PHE ALA \ SEQRES 19 A 432 ILE ASN LEU LYS LYS VAL GLU GLU ARG GLU LEU PRO GLU \ SEQRES 20 A 432 LEU THR ALA GLU PHE ILE LYS ARG PHE GLY VAL GLU ASP \ SEQRES 21 A 432 GLY SER VAL GLU GLY LEU ARG ALA GLU VAL ARG LYS ASN \ SEQRES 22 A 432 MSE GLU ARG GLU LEU LYS SER ALA ILE ARG ASN ARG VAL \ SEQRES 23 A 432 LYS SER GLN ALA ILE GLU GLY LEU VAL LYS ALA ASN ASP \ SEQRES 24 A 432 ILE ASP VAL PRO ALA ALA LEU ILE ASP SER GLU ILE ASP \ SEQRES 25 A 432 VAL LEU ARG ARG GLN ALA ALA GLN ARG PHE GLY GLY ASN \ SEQRES 26 A 432 GLU LYS GLN ALA LEU GLU LEU PRO ARG GLU LEU PHE GLU \ SEQRES 27 A 432 GLU GLN ALA LYS ARG ARG VAL VAL VAL GLY LEU LEU LEU \ SEQRES 28 A 432 GLY GLU VAL ILE ARG THR ASN GLU LEU LYS ALA ASP GLU \ SEQRES 29 A 432 GLU ARG VAL LYS GLY LEU ILE GLU GLU MSE ALA SER ALA \ SEQRES 30 A 432 TYR GLU ASP PRO LYS GLU VAL ILE GLU PHE TYR SER LYS \ SEQRES 31 A 432 ASN LYS GLU LEU MSE ASP ASN MSE ARG ASN VAL ALA LEU \ SEQRES 32 A 432 GLU GLU GLN ALA VAL GLU ALA VAL LEU ALA LYS ALA LYS \ SEQRES 33 A 432 VAL THR GLU LYS GLU THR THR PHE ASN GLU LEU MSE ASN \ SEQRES 34 A 432 GLN GLN ALA \ SEQRES 1 B 100 MET ILE ARG GLU GLU ARG LEU LEU LYS VAL LEU ARG ALA \ SEQRES 2 B 100 PRO HIS VAL SER GLU LYS ALA SER THR ALA MET GLU LYS \ SEQRES 3 B 100 SER ASN THR ILE VAL LEU LYS VAL ALA LYS ASP ALA THR \ SEQRES 4 B 100 LYS ALA GLU ILE LYS ALA ALA VAL GLN LYS LEU PHE GLU \ SEQRES 5 B 100 VAL GLU VAL GLU VAL VAL ASN THR LEU VAL VAL LYS GLY \ SEQRES 6 B 100 LYS VAL LYS ARG HIS GLY GLN ARG ILE GLY ARG ARG SER \ SEQRES 7 B 100 ASP TRP LYS LYS ALA TYR VAL THR LEU LYS GLU GLY GLN \ SEQRES 8 B 100 ASN LEU ASP PHE VAL GLY GLY ALA GLU \ SEQRES 1 C 103 ALA ALA LYS ILE ARG ARG ASP ASP GLU VAL ILE VAL LEU \ SEQRES 2 C 103 THR GLY LYS ASP LYS GLY LYS ARG GLY LYS VAL LYS ASN \ SEQRES 3 C 103 VAL LEU SER SER GLY LYS VAL ILE VAL GLU GLY ILE ASN \ SEQRES 4 C 103 LEU VAL LYS LYS HIS GLN LYS PRO VAL PRO ALA LEU ASN \ SEQRES 5 C 103 GLN PRO GLY GLY ILE VAL GLU LYS GLU ALA ALA ILE GLN \ SEQRES 6 C 103 VAL SER ASN VAL ALA ILE PHE ASN ALA ALA THR GLY LYS \ SEQRES 7 C 103 ALA ASP ARG VAL GLY PHE ARG PHE GLU ASP GLY LYS LYS \ SEQRES 8 C 103 VAL ARG PHE PHE LYS SER ASN SER GLU THR ILE LYS \ SEQRES 1 D 63 MET LYS ALA LYS GLU LEU ARG GLU LYS SER VAL GLU GLU \ SEQRES 2 D 63 LEU ASN THR GLU LEU LEU ASN LEU LEU ARG GLU GLN PHE \ SEQRES 3 D 63 ASN LEU ARG MET GLN ALA ALA SER GLY GLN LEU GLN GLN \ SEQRES 4 D 63 SER HIS LEU LEU LYS GLN VAL ARG ARG ASP VAL ALA ARG \ SEQRES 5 D 63 VAL LYS THR LEU LEU ASN GLU LYS ALA GLY ALA \ MODRES 2VRH MSE A 1 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 51 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 71 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 140 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 189 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 194 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 274 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 374 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 395 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 398 MET SELENOMETHIONINE \ MODRES 2VRH MSE A 428 MET SELENOMETHIONINE \ HET MSE A 1 1 \ HET MSE A 51 1 \ HET MSE A 71 1 \ HET MSE A 140 1 \ HET MSE A 189 1 \ HET MSE A 194 1 \ HET MSE A 274 1 \ HET MSE A 374 1 \ HET MSE A 395 1 \ HET MSE A 398 1 \ HET MSE A 428 1 \ HETNAM MSE SELENOMETHIONINE \ FORMUL 1 MSE 11(C5 H11 N O2 SE) \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 432 GLN A 431 \ TER 532 ALA B 99 \ TER 635 ILE C 102 \ ATOM 636 CA MET D 1 512.393 383.637 447.058 1.00 20.00 C \ ATOM 637 CA LYS D 2 508.857 383.760 445.690 1.00 20.00 C \ ATOM 638 CA ALA D 3 506.832 380.886 444.191 1.00 20.00 C \ ATOM 639 CA LYS D 4 505.689 377.899 446.234 1.00 20.00 C \ ATOM 640 CA GLU D 5 508.167 378.232 449.108 1.00 20.00 C \ ATOM 641 CA LEU D 6 507.479 378.424 452.871 1.00 20.00 C \ ATOM 642 CA ARG D 7 504.105 376.635 452.742 1.00 20.00 C \ ATOM 643 CA GLU D 8 503.932 376.008 456.505 1.00 20.00 C \ ATOM 644 CA LYS D 9 504.767 379.462 457.861 1.00 20.00 C \ ATOM 645 CA SER D 10 501.964 379.517 460.444 1.00 20.00 C \ ATOM 646 CA VAL D 11 503.811 382.564 461.708 1.00 20.00 C \ ATOM 647 CA GLU D 12 502.581 384.087 458.487 1.00 20.00 C \ ATOM 648 CA GLU D 13 503.158 387.621 457.277 1.00 20.00 C \ ATOM 649 CA LEU D 14 501.247 387.880 453.999 1.00 20.00 C \ ATOM 650 CA ASN D 15 500.328 391.514 454.710 1.00 20.00 C \ ATOM 651 CA THR D 16 501.578 394.404 452.573 1.00 20.00 C \ ATOM 652 CA GLU D 17 503.144 391.737 450.358 1.00 20.00 C \ ATOM 653 CA LEU D 18 501.120 393.305 447.566 1.00 20.00 C \ ATOM 654 CA LEU D 19 501.533 397.079 447.924 1.00 20.00 C \ ATOM 655 CA ASN D 20 505.227 396.919 448.789 1.00 20.00 C \ ATOM 656 CA LEU D 21 505.588 395.037 445.510 1.00 20.00 C \ ATOM 657 CA LEU D 22 503.204 397.441 443.775 1.00 20.00 C \ ATOM 658 CA ARG D 23 506.298 399.208 442.440 1.00 20.00 C \ ATOM 659 CA GLU D 24 505.257 398.095 438.961 1.00 20.00 C \ ATOM 660 CA GLN D 25 501.488 398.553 438.714 1.00 20.00 C \ ATOM 661 CA PHE D 26 501.758 401.362 441.245 1.00 20.00 C \ ATOM 662 CA ASN D 27 504.877 403.136 439.970 1.00 20.00 C \ ATOM 663 CA LEU D 28 506.930 401.548 437.195 1.00 20.00 C \ ATOM 664 CA ARG D 29 503.891 400.639 435.055 1.00 20.00 C \ ATOM 665 CA MET D 30 503.099 404.304 434.553 1.00 20.00 C \ ATOM 666 CA GLN D 31 505.208 404.995 431.509 1.00 20.00 C \ ATOM 667 CA ALA D 32 508.449 403.509 430.198 1.00 20.00 C \ ATOM 668 CA ALA D 33 510.223 401.972 433.199 1.00 20.00 C \ ATOM 669 CA SER D 34 508.285 398.918 434.443 1.00 20.00 C \ ATOM 670 CA GLY D 35 511.334 396.992 433.350 1.00 20.00 C \ ATOM 671 CA GLN D 36 511.774 397.921 429.701 1.00 20.00 C \ ATOM 672 CA LEU D 37 514.589 395.564 428.722 1.00 20.00 C \ ATOM 673 CA GLN D 38 516.637 393.877 431.476 1.00 20.00 C \ ATOM 674 CA GLN D 39 513.614 392.457 433.336 1.00 20.00 C \ ATOM 675 CA SER D 40 510.194 393.646 432.160 1.00 20.00 C \ ATOM 676 CA HIS D 41 506.910 391.998 433.109 1.00 20.00 C \ ATOM 677 CA LEU D 42 507.047 390.288 436.494 1.00 20.00 C \ ATOM 678 CA LEU D 43 503.460 390.336 437.781 1.00 20.00 C \ ATOM 679 CA LYS D 44 501.943 387.429 435.836 1.00 20.00 C \ ATOM 680 CA GLN D 45 505.397 385.921 435.370 1.00 20.00 C \ ATOM 681 CA VAL D 46 505.959 385.521 439.100 1.00 20.00 C \ ATOM 682 CA ARG D 47 504.295 388.068 441.410 1.00 20.00 C \ ATOM 683 CA ARG D 48 501.014 386.393 440.498 1.00 20.00 C \ ATOM 684 CA ASP D 49 501.678 384.069 443.436 1.00 20.00 C \ ATOM 685 CA VAL D 50 499.552 386.404 445.565 1.00 20.00 C \ ATOM 686 CA ALA D 51 496.946 383.652 445.314 1.00 20.00 C \ ATOM 687 CA ARG D 52 499.221 380.946 446.700 1.00 20.00 C \ ATOM 688 CA VAL D 53 499.733 383.051 449.843 1.00 20.00 C \ ATOM 689 CA LYS D 54 496.180 384.273 450.449 1.00 20.00 C \ ATOM 690 CA THR D 55 495.029 380.795 449.469 1.00 20.00 C \ ATOM 691 CA LEU D 56 497.222 379.241 452.160 1.00 20.00 C \ ATOM 692 CA LEU D 57 496.072 381.730 454.789 1.00 20.00 C \ ATOM 693 CA ASN D 58 492.564 380.806 453.656 1.00 20.00 C \ ATOM 694 CA GLU D 59 493.457 377.150 454.186 1.00 20.00 C \ ATOM 695 CA LYS D 60 495.159 377.626 457.560 1.00 20.00 C \ ATOM 696 CA ALA D 61 491.720 378.683 458.753 1.00 20.00 C \ ATOM 697 CA GLY D 62 491.118 375.609 460.887 1.00 20.00 C \ ATOM 698 CA ALA D 63 493.854 376.570 463.315 1.00 20.00 C \ TER 699 ALA D 63 \ MASTER 150 0 11 0 0 0 0 6 695 4 0 55 \ END \ """, "chainD") 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D & i. 1-60") cmd.center("e2vrhD1", state=0, origin=1) cmd.zoom("e2vrhD1", animate=-1) cmd.show_as('cartoon', "e2vrhD1") cmd.spectrum('count', 'rainbow', "e2vrhD1") cmd.disable("e2vrhD1")