HEADER TRANSCRIPTION/DNA 27-MAR-02 1L9Z TITLE Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter TITLE 2 DNA Complex at 6.5 A Resolution COMPND MOL_ID: 4; COMPND 2 MOLECULE: RNA POLYMERASE, BETA SUBUNIT; COMPND 3 CHAIN: C; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 6.50 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS C 649 REMARK 465 LYS C 650 REMARK 465 GLY C 651 DBREF 1L9Z C 1 1119 UNP Q9KWU7 RPOB_THEAQ 1 1119 SEQRES 1 C 70 LEU ALA ALA LEU TYR ALA GLU GLU ASP GLY GLU VAL VAL SEQRES 2 C 70 LYS VAL ASP GLY THR ARG ILE ALA VAL ARG TYR GLU ASP SEQRES 3 C 70 GLY ARG LEU VAL HIS PRO LEU ARG ARG TYR ALA ARG SER SEQRES 4 C 70 ASN GLN GLY THR ALA PHE ASP GLN ARG PRO ARG VAL ARG SEQRES 5 C 70 VAL GLY GLN ARG VAL LYS LYS GLY ASP LEU LEU ALA ASP SEQRES 6 C 70 GLY PRO ALA SER GLU ATOM 1 N LEU C 592 99.497 173.735 188.723 1.00 25.00 ATOM 2 CA LEU C 592 100.723 174.384 189.168 1.00 25.00 ATOM 3 C LEU C 592 100.667 174.758 190.644 1.00 25.00 ATOM 4 N ALA C 593 99.823 174.058 191.397 1.00 25.00 ATOM 5 CA ALA C 593 99.685 174.313 192.825 1.00 25.00 ATOM 6 C ALA C 593 101.041 174.128 193.494 1.00 25.00 ATOM 7 N ALA C 594 101.734 173.060 193.111 1.00 25.00 ATOM 8 CA ALA C 594 103.050 172.758 193.656 1.00 25.00 ATOM 9 C ALA C 594 104.120 173.189 192.659 1.00 25.00 ATOM 10 N LEU C 595 105.344 172.713 192.861 1.00 25.00 ATOM 11 CA LEU C 595 106.448 173.058 191.974 1.00 25.00 ATOM 12 C LEU C 595 106.818 171.884 191.075 1.00 25.00 ATOM 13 N TYR C 596 107.976 171.983 190.429 1.00 25.00 ATOM 14 CA TYR C 596 108.449 170.935 189.533 1.00 25.00 ATOM 15 C TYR C 596 109.951 170.706 189.672 1.00 25.00 ATOM 16 N ALA C 597 110.476 169.782 188.874 1.00 25.00 ATOM 17 CA ALA C 597 111.898 169.458 188.888 1.00 25.00 ATOM 18 C ALA C 597 112.405 169.341 187.454 1.00 25.00 ATOM 19 N GLU C 598 113.307 170.239 187.071 1.00 25.00 ATOM 20 CA GLU C 598 113.854 170.242 185.720 1.00 25.00 ATOM 21 C GLU C 598 115.132 169.419 185.584 1.00 25.00 ATOM 22 N GLU C 599 115.258 168.736 184.450 1.00 25.00 ATOM 23 CA GLU C 599 116.421 167.906 184.152 1.00 25.00 ATOM 24 C GLU C 599 116.780 166.935 185.277 1.00 25.00 ATOM 25 N ASP C 600 118.072 166.840 185.581 1.00 25.00 ATOM 26 CA ASP C 600 118.571 165.944 186.622 1.00 25.00 ATOM 27 C ASP C 600 118.007 166.239 188.008 1.00 25.00 ATOM 28 N GLY C 601 118.748 165.819 189.030 1.00 25.00 ATOM 29 CA GLY C 601 118.326 166.035 190.402 1.00 25.00 ATOM 30 C GLY C 601 119.386 166.723 191.242 1.00 25.00 ATOM 31 N GLU C 602 119.786 166.081 192.337 1.00 25.00 ATOM 32 CA GLU C 602 120.791 166.639 193.237 1.00 25.00 ATOM 33 C GLU C 602 120.294 167.975 193.780 1.00 25.00 ATOM 34 N VAL C 603 119.369 167.903 194.732 1.00 25.00 ATOM 35 CA VAL C 603 118.775 169.093 195.329 1.00 25.00 ATOM 36 C VAL C 603 119.628 169.799 196.383 1.00 25.00 ATOM 37 N VAL C 604 120.162 169.044 197.341 1.00 25.00 ATOM 38 CA VAL C 604 120.973 169.632 198.406 1.00 25.00 ATOM 39 C VAL C 604 120.163 170.772 199.023 1.00 25.00 ATOM 40 N LYS C 605 118.844 170.638 198.930 1.00 25.00 ATOM 41 CA LYS C 605 117.905 171.627 199.440 1.00 25.00 ATOM 42 C LYS C 605 118.277 172.213 200.796 1.00 25.00 ATOM 43 N VAL C 606 118.059 173.517 200.937 1.00 25.00 ATOM 44 CA VAL C 606 118.329 174.218 202.184 1.00 25.00 ATOM 45 C VAL C 606 116.970 174.380 202.852 1.00 25.00 ATOM 46 N ASP C 607 115.928 174.115 202.068 1.00 25.00 ATOM 47 CA ASP C 607 114.549 174.204 202.526 1.00 25.00 ATOM 48 C ASP C 607 114.196 175.611 202.993 1.00 25.00 ATOM 49 N GLY C 608 113.422 175.694 204.071 1.00 25.00 ATOM 50 CA GLY C 608 113.027 176.987 204.596 1.00 25.00 ATOM 51 C GLY C 608 111.945 177.645 203.764 1.00 25.00 ATOM 52 N THR C 609 112.273 178.791 203.175 1.00 25.00 ATOM 53 CA THR C 609 111.326 179.531 202.351 1.00 25.00 ATOM 54 C THR C 609 111.875 179.691 200.937 1.00 25.00 ATOM 55 N ARG C 610 112.968 178.991 200.653 1.00 25.00 ATOM 56 CA ARG C 610 113.593 179.051 199.339 1.00 25.00 ATOM 57 C ARG C 610 114.275 177.732 198.992 1.00 25.00 ATOM 58 N ILE C 611 113.569 176.890 198.246 1.00 25.00 ATOM 59 CA ILE C 611 114.100 175.596 197.838 1.00 25.00 ATOM 60 C ILE C 611 115.437 175.792 197.131 1.00 25.00 ATOM 61 N ALA C 612 116.386 174.903 197.406 1.00 25.00 ATOM 62 CA ALA C 612 117.714 174.988 196.809 1.00 25.00 ATOM 63 C ALA C 612 117.700 174.819 195.295 1.00 25.00 ATOM 64 N VAL C 613 118.825 174.358 194.758 1.00 25.00 ATOM 65 CA VAL C 613 118.973 174.150 193.325 1.00 25.00 ATOM 66 C VAL C 613 119.263 172.679 193.033 1.00 25.00 ATOM 67 N ARG C 614 119.352 172.338 191.752 1.00 25.00 ATOM 68 CA ARG C 614 119.618 170.969 191.332 1.00 25.00 ATOM 69 C ARG C 614 120.808 170.877 190.382 1.00 25.00 ATOM 70 N TYR C 615 121.618 169.836 190.553 1.00 25.00 ATOM 71 CA TYR C 615 122.788 169.629 189.707 1.00 25.00 ATOM 72 C TYR C 615 122.356 169.072 188.357 1.00 25.00 ATOM 73 N GLU C 616 121.541 169.847 187.650 1.00 25.00 ATOM 74 CA GLU C 616 121.041 169.451 186.342 1.00 25.00 ATOM 75 C GLU C 616 121.597 170.377 185.268 1.00 25.00 ATOM 76 N ASP C 617 121.433 171.680 185.477 1.00 25.00 ATOM 77 CA ASP C 617 121.918 172.677 184.531 1.00 25.00 ATOM 78 C ASP C 617 121.874 174.079 185.131 1.00 25.00 ATOM 79 N GLY C 618 122.986 174.498 185.726 1.00 25.00 ATOM 80 CA GLY C 618 123.051 175.818 186.328 1.00 25.00 ATOM 81 C GLY C 618 122.594 175.829 187.773 1.00 25.00 ATOM 82 N ARG C 619 122.478 177.023 188.345 1.00 25.00 ATOM 83 CA ARG C 619 122.049 177.169 189.731 1.00 25.00 ATOM 84 C ARG C 619 120.877 178.139 189.844 1.00 25.00 ATOM 85 N LEU C 620 119.676 177.591 189.997 1.00 25.00 ATOM 86 CA LEU C 620 118.469 178.400 190.118 1.00 25.00 ATOM 87 C LEU C 620 117.724 178.073 191.407 1.00 25.00 ATOM 88 N VAL C 621 117.591 179.069 192.277 1.00 25.00 ATOM 89 CA VAL C 621 116.898 178.892 193.547 1.00 25.00 ATOM 90 C VAL C 621 115.392 179.032 193.347 1.00 25.00 ATOM 91 N HIS C 623 114.636 178.070 193.867 1.00 25.00 ATOM 92 CA HIS C 623 113.183 178.082 193.744 1.00 25.00 ATOM 93 C HIS C 623 112.531 178.690 194.983 1.00 25.00 ATOM 94 N PRO C 624 112.138 179.971 194.904 1.00 25.00 ATOM 95 CA PRO C 624 111.501 180.668 196.024 1.00 25.00 ATOM 96 C PRO C 624 110.021 180.322 196.169 1.00 25.00 ATOM 97 N LEU C 625 109.626 179.910 197.369 1.00 25.00 ATOM 98 CA LEU C 625 108.235 179.563 197.633 1.00 25.00 ATOM 99 C LEU C 625 107.353 180.796 197.478 1.00 25.00 ATOM 100 N ARG C 626 106.043 180.583 197.418 1.00 25.00 ATOM 101 CA ARG C 626 105.100 181.685 197.273 1.00 25.00 ATOM 102 C ARG C 626 104.973 182.447 198.587 1.00 25.00 ATOM 103 N ARG C 627 105.611 181.924 199.630 1.00 25.00 ATOM 104 CA ARG C 627 105.574 182.545 200.949 1.00 25.00 ATOM 105 C ARG C 627 104.132 182.791 201.378 1.00 25.00 ATOM 106 N TYR C 628 103.351 181.716 201.446 1.00 25.00 ATOM 107 CA TYR C 628 101.945 181.797 201.833 1.00 25.00 ATOM 108 C TYR C 628 101.112 182.571 200.817 1.00 25.00 ATOM 109 N ALA C 629 101.786 183.349 199.975 1.00 25.00 ATOM 110 CA ALA C 629 101.123 184.143 198.946 1.00 25.00 ATOM 111 C ALA C 629 99.844 184.794 199.463 1.00 25.00 ATOM 112 N ARG C 630 98.856 184.922 198.582 1.00 25.00 ATOM 113 CA ARG C 630 97.578 185.523 198.940 1.00 25.00 ATOM 114 C ARG C 630 96.459 184.924 198.096 1.00 25.00 ATOM 115 N SER C 631 95.267 184.838 198.677 1.00 25.00 ATOM 116 CA SER C 631 94.114 184.285 197.977 1.00 25.00 ATOM 117 C SER C 631 93.098 185.374 197.656 1.00 25.00 ATOM 118 N ASN C 632 92.216 185.088 196.705 1.00 25.00 ATOM 119 CA ASN C 632 91.187 186.038 196.303 1.00 25.00 ATOM 120 C ASN C 632 89.907 185.762 197.082 1.00 25.00 ATOM 121 N GLN C 633 89.928 184.689 197.867 1.00 25.00 ATOM 122 CA GLN C 633 88.777 184.299 198.672 1.00 25.00 ATOM 123 C GLN C 633 89.148 184.295 200.151 1.00 25.00 ATOM 124 N GLY C 634 90.282 184.910 200.472 1.00 25.00 ATOM 125 CA GLY C 634 90.730 184.961 201.851 1.00 25.00 ATOM 126 C GLY C 634 91.077 183.586 202.386 1.00 25.00 ATOM 127 N THR C 635 92.074 182.950 201.779 1.00 25.00 ATOM 128 CA THR C 635 92.500 181.620 202.196 1.00 25.00 ATOM 129 C THR C 635 94.012 181.552 202.383 1.00 25.00 ATOM 130 N ALA C 636 94.749 182.098 201.420 1.00 25.00 ATOM 131 CA ALA C 636 96.208 182.101 201.468 1.00 25.00 ATOM 132 C ALA C 636 96.753 180.677 201.484 1.00 25.00 ATOM 133 N PHE C 637 97.307 180.247 200.355 1.00 25.00 ATOM 134 CA PHE C 637 97.861 178.904 200.241 1.00 25.00 ATOM 135 C PHE C 637 99.363 178.885 200.500 1.00 25.00 ATOM 136 N ASP C 638 99.841 177.784 201.071 1.00 25.00 ATOM 137 CA ASP C 638 101.258 177.624 201.372 1.00 25.00 ATOM 138 C ASP C 638 101.795 176.396 200.648 1.00 25.00 ATOM 139 N GLN C 639 103.116 176.268 200.594 1.00 25.00 ATOM 140 CA GLN C 639 103.739 175.134 199.923 1.00 25.00 ATOM 141 C GLN C 639 104.979 174.632 200.657 1.00 25.00 ATOM 142 N ARG C 640 104.794 173.594 201.468 1.00 25.00 ATOM 143 CA ARG C 640 105.889 173.005 202.230 1.00 25.00 ATOM 144 C ARG C 640 106.635 171.982 201.378 1.00 25.00 ATOM 145 N PRO C 641 107.977 172.010 201.420 1.00 25.00 ATOM 146 CA PRO C 641 108.820 171.088 200.653 1.00 25.00 ATOM 147 C PRO C 641 108.834 169.661 201.199 1.00 25.00 ATOM 148 N ARG C 642 109.729 168.842 200.654 1.00 25.00 ATOM 149 CA ARG C 642 109.869 167.451 201.069 1.00 25.00 ATOM 150 C ARG C 642 111.128 166.842 200.456 1.00 25.00 ATOM 151 N VAL C 643 112.289 167.219 200.982 1.00 25.00 ATOM 152 CA VAL C 643 113.554 166.701 200.474 1.00 25.00 ATOM 153 C VAL C 643 114.737 167.166 201.314 1.00 25.00 ATOM 154 N ARG C 644 115.898 166.569 201.059 1.00 25.00 ATOM 155 CA ARG C 644 117.120 166.907 201.779 1.00 25.00 ATOM 156 C ARG C 644 118.306 166.163 201.176 1.00 25.00 ATOM 157 N VAL C 645 119.479 166.787 201.232 1.00 25.00 ATOM 158 CA VAL C 645 120.704 166.199 200.696 1.00 25.00 ATOM 159 C VAL C 645 120.647 166.047 199.178 1.00 25.00 ATOM 160 N GLY C 646 119.733 165.209 198.699 1.00 25.00 ATOM 161 CA GLY C 646 119.604 165.002 197.268 1.00 25.00 ATOM 162 C GLY C 646 118.646 163.883 196.905 1.00 25.00 ATOM 163 N GLN C 647 117.815 164.129 195.897 1.00 25.00 ATOM 164 CA GLN C 647 116.843 163.144 195.433 1.00 25.00 ATOM 165 C GLN C 647 116.116 163.671 194.200 1.00 25.00 ATOM 166 N ARG C 648 115.654 162.760 193.349 1.00 25.00 ATOM 167 CA ARG C 648 114.945 163.144 192.134 1.00 25.00 ATOM 168 C ARG C 648 114.172 161.952 191.579 1.00 25.00 ATOM 169 N VAL C 649 112.849 162.082 191.533 1.00 25.00 ATOM 170 CA VAL C 649 111.986 161.021 191.027 1.00 25.00 ATOM 171 C VAL C 649 112.241 159.709 191.762 1.00 25.00 ATOM 172 N ASP C 653 108.404 162.909 189.865 1.00 25.00 ATOM 173 CA ASP C 653 109.383 163.971 190.054 1.00 25.00 ATOM 174 C ASP C 653 108.789 165.141 190.831 1.00 25.00 ATOM 175 N LEU C 654 108.050 164.823 191.889 1.00 25.00 ATOM 176 CA LEU C 654 107.426 165.840 192.725 1.00 25.00 ATOM 177 C LEU C 654 108.485 166.605 193.510 1.00 25.00 ATOM 178 N LEU C 655 108.162 167.841 193.877 1.00 25.00 ATOM 179 CA LEU C 655 109.080 168.682 194.632 1.00 25.00 ATOM 180 C LEU C 655 108.281 169.749 195.373 1.00 25.00 ATOM 181 N ALA C 656 108.052 169.519 196.663 1.00 25.00 ATOM 182 CA ALA C 656 107.295 170.446 197.499 1.00 25.00 ATOM 183 C ALA C 656 105.829 170.480 197.080 1.00 25.00 ATOM 184 N ASP C 657 104.939 170.228 198.035 1.00 25.00 ATOM 185 CA ASP C 657 103.505 170.226 197.769 1.00 25.00 ATOM 186 C ASP C 657 102.981 171.638 197.528 1.00 25.00 ATOM 187 N GLY C 658 101.664 171.793 197.612 1.00 25.00 ATOM 188 CA GLY C 658 101.053 173.093 197.404 1.00 25.00 ATOM 189 C GLY C 658 100.051 173.427 198.492 1.00 25.00 ATOM 190 N PRO C 659 98.905 174.029 198.136 1.00 25.00 ATOM 191 CA PRO C 659 97.876 174.391 199.116 1.00 25.00 ATOM 192 C PRO C 659 97.315 173.179 199.855 1.00 25.00 ATOM 193 N ALA C 660 96.299 172.553 199.271 1.00 25.00 ATOM 194 CA ALA C 660 95.674 171.381 199.871 1.00 25.00 ATOM 195 C ALA C 660 96.049 170.123 199.095 1.00 25.00 ATOM 196 N SER C 661 97.267 169.639 199.318 1.00 25.00 ATOM 197 CA SER C 661 97.750 168.443 198.640 1.00 25.00 ATOM 198 C SER C 661 98.758 167.696 199.505 1.00 25.00 ATOM 199 N GLU C 662 99.081 166.471 199.103 1.00 25.00 ATOM 200 CA GLU C 662 100.032 165.649 199.839 1.00 25.00 ATOM 201 C GLU C 662 100.683 164.628 198.911 1.00 25.00 TER