HEADER RIBOSOME 16-DEC-04 1VQM TITLE The structure of the transition state analogue "DAN" bound to the TITLE 2 large ribosomal subunit of haloarcula marismortui COMPND MOL_ID: 10; COMPND 2 MOLECULE: ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG; COMPND 3 CHAIN: G; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.30 ANGSTORMS DBREF 1VQM G 1 348 UNP P15825 RLA0_HALMA 1 348 SEQRES 1 G 29 ILE PRO GLU TRP LYS GLN GLU GLU VAL ASP ALA ILE VAL SEQRES 2 G 29 GLU MET ILE GLU SER ARG ASN THR LEU LEU GLU ARG ALA SEQRES 3 G 29 LEU ASP ASP ATOM 1 N ILE G 12 37.091 67.622 172.173 1.00 97.47 ATOM 2 CA ILE G 12 36.993 66.469 173.114 1.00 96.71 ATOM 3 C ILE G 12 38.393 66.013 173.534 1.00 95.84 ATOM 4 O ILE G 12 38.631 64.819 173.726 1.00 95.52 ATOM 5 CB ILE G 12 36.289 65.281 172.436 1.00 97.61 ATOM 6 CG1 ILE G 12 35.227 65.796 171.461 1.00 97.58 ATOM 7 CG2 ILE G 12 35.651 64.387 173.490 1.00 98.80 ATOM 8 CD1 ILE G 12 34.601 64.723 170.605 1.00 97.14 ATOM 9 N PRO G 13 39.336 66.958 173.692 1.00 94.97 ATOM 10 CA PRO G 13 40.705 66.608 174.083 1.00 94.75 ATOM 11 C PRO G 13 40.768 65.535 175.160 1.00 94.91 ATOM 12 O PRO G 13 39.969 65.536 176.098 1.00 94.76 ATOM 13 CB PRO G 13 41.274 67.939 174.554 1.00 94.40 ATOM 14 CG PRO G 13 40.586 68.911 173.668 1.00 94.45 ATOM 15 CD PRO G 13 39.160 68.420 173.711 1.00 94.33 ATOM 16 N GLU G 14 41.718 64.617 175.014 1.00 94.57 ATOM 17 CA GLU G 14 41.880 63.540 175.976 1.00 94.04 ATOM 18 C GLU G 14 42.416 64.049 177.308 1.00 92.57 ATOM 19 O GLU G 14 42.231 63.402 178.340 1.00 92.79 ATOM 20 CB GLU G 14 42.807 62.453 175.415 1.00 95.28 ATOM 21 CG GLU G 14 42.167 61.599 174.322 1.00 98.37 ATOM 22 CD GLU G 14 43.020 60.400 173.919 1.00100.13 ATOM 23 OE1 GLU G 14 43.445 59.643 174.818 1.00101.16 ATOM 24 OE2 GLU G 14 43.257 60.207 172.705 1.00100.15 ATOM 25 N TRP G 15 43.066 65.211 177.295 1.00 90.50 ATOM 26 CA TRP G 15 43.619 65.768 178.526 1.00 88.88 ATOM 27 C TRP G 15 42.544 66.444 179.366 1.00 87.97 ATOM 28 O TRP G 15 42.662 66.528 180.586 1.00 87.22 ATOM 29 CB TRP G 15 44.741 66.768 178.228 1.00 88.38 ATOM 30 CG TRP G 15 44.270 68.044 177.621 1.00 88.45 ATOM 31 CD1 TRP G 15 44.075 68.301 176.295 1.00 88.33 ATOM 32 CD2 TRP G 15 43.908 69.239 178.320 1.00 88.07 ATOM 33 NE1 TRP G 15 43.614 69.585 176.123 1.00 87.90 ATOM 34 CE2 TRP G 15 43.502 70.183 177.350 1.00 87.78 ATOM 35 CE3 TRP G 15 43.885 69.604 179.673 1.00 87.51 ATOM 36 CZ2 TRP G 15 43.079 71.471 177.689 1.00 87.43 ATOM 37 CZ3 TRP G 15 43.463 70.885 180.010 1.00 87.38 ATOM 38 CH2 TRP G 15 43.066 71.803 179.020 1.00 87.57 ATOM 39 N LYS G 16 41.500 66.938 178.714 1.00 87.49 ATOM 40 CA LYS G 16 40.412 67.576 179.440 1.00 87.82 ATOM 41 C LYS G 16 39.589 66.484 180.116 1.00 88.82 ATOM 42 O LYS G 16 38.900 66.729 181.109 1.00 88.65 ATOM 43 CB LYS G 16 39.517 68.375 178.494 1.00 86.68 ATOM 44 CG LYS G 16 40.138 69.641 177.937 1.00 84.99 ATOM 45 CD LYS G 16 39.079 70.450 177.208 1.00 83.42 ATOM 46 CE LYS G 16 39.602 71.786 176.730 1.00 82.11 ATOM 47 NZ LYS G 16 38.492 72.590 176.154 1.00 81.68 ATOM 48 N GLN G 17 39.662 65.276 179.563 1.00 89.59 ATOM 49 CA GLN G 17 38.937 64.141 180.116 1.00 89.96 ATOM 50 C GLN G 17 39.713 63.570 181.297 1.00 90.13 ATOM 51 O GLN G 17 39.134 63.238 182.328 1.00 89.90 ATOM 52 CB GLN G 17 38.726 63.066 179.044 1.00 90.33 ATOM 53 CG GLN G 17 37.734 63.469 177.953 1.00 91.59 ATOM 54 CD GLN G 17 37.378 62.325 177.012 1.00 92.59 ATOM 55 OE1 GLN G 17 36.866 61.288 177.439 1.00 93.15 ATOM 56 NE2 GLN G 17 37.645 62.514 175.724 1.00 92.53 ATOM 57 N GLU G 18 41.029 63.470 181.148 1.00 90.56 ATOM 58 CA GLU G 18 41.869 62.951 182.217 1.00 91.69 ATOM 59 C GLU G 18 41.892 63.903 183.406 1.00 91.31 ATOM 60 O GLU G 18 42.145 63.488 184.536 1.00 90.68 ATOM 61 CB GLU G 18 43.295 62.723 181.711 1.00 93.35 ATOM 62 CG GLU G 18 43.435 61.523 180.788 1.00 96.66 ATOM 63 CD GLU G 18 44.847 61.350 180.259 1.00 98.79 ATOM 64 OE1 GLU G 18 45.800 61.423 181.068 1.00100.21 ATOM 65 OE2 GLU G 18 45.004 61.132 179.037 1.00 99.73 ATOM 66 N GLU G 19 41.628 65.181 183.151 1.00 91.28 ATOM 67 CA GLU G 19 41.620 66.169 184.220 1.00 91.25 ATOM 68 C GLU G 19 40.352 66.019 185.044 1.00 91.35 ATOM 69 O GLU G 19 40.411 65.934 186.267 1.00 91.75 ATOM 70 CB GLU G 19 41.696 67.592 183.658 1.00 91.33 ATOM 71 CG GLU G 19 41.775 68.677 184.738 1.00 91.06 ATOM 72 CD GLU G 19 43.146 68.771 185.398 1.00 90.90 ATOM 73 OE1 GLU G 19 43.775 67.718 185.632 1.00 90.89 ATOM 74 OE2 GLU G 19 43.591 69.903 185.694 1.00 89.72 ATOM 75 N VAL G 20 39.206 65.985 184.372 1.00 91.44 ATOM 76 CA VAL G 20 37.929 65.839 185.060 1.00 92.32 ATOM 77 C VAL G 20 37.956 64.639 186.000 1.00 93.85 ATOM 78 O VAL G 20 37.405 64.689 187.098 1.00 94.10 ATOM 79 CB VAL G 20 36.772 65.652 184.066 1.00 91.66 ATOM 80 CG1 VAL G 20 35.476 65.409 184.820 1.00 91.34 ATOM 81 CG2 VAL G 20 36.646 66.877 183.189 1.00 91.51 ATOM 82 N ASP G 21 38.595 63.558 185.564 1.00 95.22 ATOM 83 CA ASP G 21 38.696 62.360 186.384 1.00 96.46 ATOM 84 C ASP G 21 39.709 62.597 187.494 1.00 97.17 ATOM 85 O ASP G 21 39.535 62.130 188.619 1.00 98.07 ATOM 86 CB ASP G 21 39.130 61.160 185.536 1.00 97.00 ATOM 87 CG ASP G 21 38.141 60.838 184.432 1.00 98.08 ATOM 88 OD1 ASP G 21 36.936 60.691 184.735 1.00 98.24 ATOM 89 OD2 ASP G 21 38.570 60.727 183.263 1.00 98.57 ATOM 90 N ALA G 22 40.769 63.328 187.171 1.00 97.59 ATOM 91 CA ALA G 22 41.807 63.628 188.144 1.00 98.03 ATOM 92 C ALA G 22 41.243 64.504 189.256 1.00 98.36 ATOM 93 O ALA G 22 41.648 64.394 190.412 1.00 98.67 ATOM 94 CB ALA G 22 42.966 64.329 187.464 1.00 98.28 ATOM 95 N ILE G 23 40.307 65.376 188.896 1.00 98.96 ATOM 96 CA ILE G 23 39.676 66.268 189.861 1.00 99.48 ATOM 97 C ILE G 23 38.698 65.470 190.709 1.00100.12 ATOM 98 O ILE G 23 38.733 65.528 191.936 1.00 99.92 ATOM 99 CB ILE G 23 38.894 67.398 189.163 1.00 99.25 ATOM 100 CG1 ILE G 23 39.849 68.279 188.357 1.00 99.34 ATOM 101 CG2 ILE G 23 38.159 68.231 190.196 1.00 99.04 ATOM 102 CD1 ILE G 23 39.152 69.372 187.575 1.00 99.27 ATOM 103 N VAL G 24 37.823 64.728 190.039 1.00101.10 ATOM 104 CA VAL G 24 36.833 63.909 190.723 1.00102.09 ATOM 105 C VAL G 24 37.523 62.967 191.704 1.00102.56 ATOM 106 O VAL G 24 36.942 62.577 192.715 1.00102.57 ATOM 107 CB VAL G 24 36.002 63.075 189.713 1.00102.11 ATOM 108 CG1 VAL G 24 35.049 62.155 190.452 1.00102.71 ATOM 109 CG2 VAL G 24 35.212 63.998 188.799 1.00102.50 ATOM 110 N GLU G 25 38.770 62.616 191.407 1.00103.37 ATOM 111 CA GLU G 25 39.529 61.713 192.264 1.00104.40 ATOM 112 C GLU G 25 39.901 62.365 193.594 1.00104.78 ATOM 113 O GLU G 25 39.903 61.705 194.633 1.00105.33 ATOM 114 CB GLU G 25 40.788 61.228 191.536 1.00104.78 ATOM 115 CG GLU G 25 41.556 60.145 192.282 1.00105.72 ATOM 116 CD GLU G 25 42.626 59.482 191.430 1.00106.08 ATOM 117 OE1 GLU G 25 43.490 60.204 190.889 1.00106.44 ATOM 118 OE2 GLU G 25 42.604 58.237 191.305 1.00106.15 ATOM 119 N MET G 26 40.213 63.658 193.565 1.00105.07 ATOM 120 CA MET G 26 40.567 64.377 194.785 1.00104.84 ATOM 121 C MET G 26 39.320 64.749 195.575 1.00103.96 ATOM 122 O MET G 26 39.270 64.559 196.787 1.00103.87 ATOM 123 CB MET G 26 41.368 65.640 194.458 1.00105.91 ATOM 124 CG MET G 26 42.806 65.361 194.043 1.00107.88 ATOM 125 SD MET G 26 43.788 66.859 193.779 1.00109.35 ATOM 126 CE MET G 26 43.931 66.869 191.956 1.00109.03 ATOM 127 N ILE G 27 38.316 65.277 194.884 1.00103.32 ATOM 128 CA ILE G 27 37.064 65.665 195.525 1.00102.92 ATOM 129 C ILE G 27 36.442 64.453 196.204 1.00102.70 ATOM 130 O ILE G 27 35.840 64.558 197.272 1.00102.44 ATOM 131 CB ILE G 27 36.044 66.187 194.500 1.00103.20 ATOM 132 CG1 ILE G 27 36.643 67.347 193.708 1.00103.42 ATOM 133 CG2 ILE G 27 34.771 66.626 195.211 1.00103.08 ATOM 134 CD1 ILE G 27 35.741 67.845 192.598 1.00104.57 ATOM 135 N GLU G 28 36.593 63.300 195.564 1.00102.65 ATOM 136 CA GLU G 28 36.042 62.052 196.071 1.00102.22 ATOM 137 C GLU G 28 36.596 61.706 197.453 1.00101.21 ATOM 138 O GLU G 28 35.896 61.119 198.279 1.00101.30 ATOM 139 CB GLU G 28 36.338 60.927 195.076 1.00102.69 ATOM 140 CG GLU G 28 35.317 59.804 195.078 1.00103.95 ATOM 141 CD GLU G 28 35.432 58.915 193.853 1.00104.64 ATOM 142 OE1 GLU G 28 36.520 58.337 193.634 1.00104.46 ATOM 143 OE2 GLU G 28 34.432 58.799 193.108 1.00104.52 ATOM 144 N SER G 29 37.849 62.075 197.704 1.00 99.55 ATOM 145 CA SER G 29 38.481 61.803 198.988 1.00 97.91 ATOM 146 C SER G 29 38.757 63.096 199.749 1.00 97.93 ATOM 147 O SER G 29 37.833 63.784 200.188 1.00 97.01 ATOM 148 CB SER G 29 39.789 61.044 198.779 1.00 97.32 ATOM 149 OG SER G 29 40.707 61.821 198.035 1.00 97.25 ATOM 150 N ARG G 63 40.828 74.653 185.515 1.00 74.59 ATOM 151 CA ARG G 63 39.822 75.508 184.892 1.00 75.37 ATOM 152 C ARG G 63 38.481 75.388 185.595 1.00 75.13 ATOM 153 O ARG G 63 38.030 74.289 185.912 1.00 75.90 ATOM 154 CB ARG G 63 39.633 75.151 183.412 1.00 75.70 ATOM 155 CG ARG G 63 40.885 75.259 182.566 1.00 75.40 ATOM 156 CD ARG G 63 40.543 75.312 181.080 1.00 74.76 ATOM 157 NE ARG G 63 41.743 75.267 180.251 1.00 74.77 ATOM 158 CZ ARG G 63 41.756 75.443 178.934 1.00 74.37 ATOM 159 NH1 ARG G 63 40.626 75.682 178.286 1.00 74.61 ATOM 160 NH2 ARG G 63 42.900 75.373 178.264 1.00 74.05 ATOM 161 N ASN G 64 37.841 76.527 185.819 1.00 74.80 ATOM 162 CA ASN G 64 36.551 76.565 186.488 1.00 75.71 ATOM 163 C ASN G 64 35.547 75.612 185.850 1.00 75.94 ATOM 164 O ASN G 64 34.792 74.934 186.545 1.00 76.49 ATOM 165 CB ASN G 64 35.998 77.992 186.465 1.00 75.68 ATOM 166 CG ASN G 64 36.956 79.000 187.085 1.00 76.20 ATOM 167 OD1 ASN G 64 36.643 80.188 187.182 1.00 76.68 ATOM 168 ND2 ASN G 64 38.130 78.531 187.503 1.00 74.70 ATOM 169 N THR G 65 35.545 75.562 184.524 1.00 75.96 ATOM 170 CA THR G 65 34.628 74.697 183.790 1.00 75.64 ATOM 171 C THR G 65 34.857 73.228 184.108 1.00 75.84 ATOM 172 O THR G 65 33.913 72.445 184.178 1.00 74.55 ATOM 173 CB THR G 65 34.791 74.878 182.281 1.00 74.94 ATOM 174 OG1 THR G 65 36.123 74.506 181.905 1.00 74.08 ATOM 175 CG2 THR G 65 34.531 76.326 181.889 1.00 73.88 ATOM 176 N LEU G 66 36.119 72.858 184.285 1.00 77.24 ATOM 177 CA LEU G 66 36.466 71.482 184.595 1.00 79.52 ATOM 178 C LEU G 66 36.109 71.146 186.039 1.00 81.45 ATOM 179 O LEU G 66 35.780 70.004 186.354 1.00 81.90 ATOM 180 CB LEU G 66 37.957 71.245 184.348 1.00 79.22 ATOM 181 CG LEU G 66 38.458 71.568 182.938 1.00 78.66 ATOM 182 CD1 LEU G 66 39.840 70.976 182.751 1.00 78.43 ATOM 183 CD2 LEU G 66 37.510 70.999 181.899 1.00 78.83 ATOM 184 N LEU G 67 36.178 72.144 186.914 1.00 83.69 ATOM 185 CA LEU G 67 35.833 71.942 188.314 1.00 85.62 ATOM 186 C LEU G 67 34.322 71.753 188.405 1.00 87.88 ATOM 187 O LEU G 67 33.847 70.860 189.099 1.00 88.83 ATOM 188 CB LEU G 67 36.263 73.146 189.157 1.00 84.50 ATOM 189 CG LEU G 67 37.748 73.520 189.141 1.00 83.81 ATOM 190 CD1 LEU G 67 37.985 74.686 190.083 1.00 82.70 ATOM 191 CD2 LEU G 67 38.594 72.328 189.552 1.00 83.37 ATOM 192 N GLU G 68 33.571 72.592 187.696 1.00 90.33 ATOM 193 CA GLU G 68 32.114 72.491 187.692 1.00 93.49 ATOM 194 C GLU G 68 31.714 71.126 187.142 1.00 95.03 ATOM 195 O GLU G 68 30.910 70.414 187.743 1.00 96.16 ATOM 196 CB GLU G 68 31.496 73.575 186.809 1.00 94.61 ATOM 197 CG GLU G 68 31.792 74.996 187.239 1.00 97.29 ATOM 198 CD GLU G 68 31.131 76.021 186.330 1.00 98.87 ATOM 199 OE1 GLU G 68 29.883 76.019 186.239 1.00 99.28 ATOM 200 OE2 GLU G 68 31.860 76.825 185.705 1.00 99.46 ATOM 201 N ARG G 69 32.281 70.778 185.990 1.00 96.24 ATOM 202 CA ARG G 69 32.011 69.503 185.331 1.00 97.13 ATOM 203 C ARG G 69 32.134 68.371 186.347 1.00 97.42 ATOM 204 O ARG G 69 31.247 67.526 186.459 1.00 96.97 ATOM 205 CB ARG G 69 33.021 69.284 184.200 1.00 98.29 ATOM 206 CG ARG G 69 32.703 68.137 183.251 1.00 99.25 ATOM 207 CD ARG G 69 31.519 68.473 182.359 1.00100.74 ATOM 208 NE ARG G 69 31.374 67.525 181.256 1.00102.10 ATOM 209 CZ ARG G 69 30.385 67.553 180.366 1.00102.85 ATOM 210 NH1 ARG G 69 29.441 68.483 180.440 1.00103.02 ATOM 211 NH2 ARG G 69 30.341 66.651 179.395 1.00103.41 ATOM 212 N ALA G 70 33.245 68.376 187.083 1.00 97.77 ATOM 213 CA ALA G 70 33.530 67.369 188.101 1.00 97.96 ATOM 214 C ALA G 70 32.502 67.424 189.220 1.00 98.50 ATOM 215 O ALA G 70 31.846 66.429 189.526 1.00 98.52 ATOM 216 CB ALA G 70 34.924 67.587 188.670 1.00 97.38 ATOM 217 N LEU G 71 32.371 68.594 189.833 1.00 98.60 ATOM 218 CA LEU G 71 31.417 68.774 190.913 1.00 98.89 ATOM 219 C LEU G 71 30.038 68.314 190.469 1.00 99.25 ATOM 220 O LEU G 71 29.233 67.881 191.285 1.00 99.06 ATOM 221 CB LEU G 71 31.361 70.243 191.333 1.00 99.07 ATOM 222 CG LEU G 71 32.657 70.856 191.871 1.00 99.30 ATOM 223 CD1 LEU G 71 32.445 72.344 192.102 1.00 99.73 ATOM 224 CD2 LEU G 71 33.077 70.161 193.156 1.00 98.28 ATOM 225 N ASP G 72 29.766 68.408 189.172 1.00100.06 ATOM 226 CA ASP G 72 28.475 67.986 188.648 1.00101.71 ATOM 227 C ASP G 72 28.338 66.473 188.652 1.00102.67 ATOM 228 O ASP G 72 27.234 65.943 188.527 1.00102.43 ATOM 229 CB ASP G 72 28.271 68.518 187.233 1.00102.48 ATOM 230 CG ASP G 72 27.734 69.931 187.221 1.00103.41 ATOM 231 OD1 ASP G 72 26.596 70.131 187.697 1.00103.31 ATOM 232 OD2 ASP G 72 28.447 70.840 186.743 1.00104.17 ATOM 233 N ASP G 73 29.465 65.780 188.791 1.00103.63 ATOM 234 CA ASP G 73 29.464 64.323 188.831 1.00104.33 ATOM 235 C ASP G 73 29.518 63.874 190.287 1.00104.56 ATOM 236 O ASP G 73 28.504 63.335 190.777 1.00104.76 ATOM 237 CB ASP G 73 30.675 63.755 188.081 1.00104.96 ATOM 238 CG ASP G 73 30.709 64.167 186.619 1.00105.44 ATOM 239 OD1 ASP G 73 29.671 64.040 185.936 1.00105.55 ATOM 240 OD2 ASP G 73 31.781 64.607 186.150 1.00105.79 TER