HEADER RIBOSOME 19-MAY-14 1VX1 TITLE Structure of the translating mammalian ribosome-Sec61 complex. This TITLE 2 entry contains the large subunit ribosomal proteins. COMPND MOL_ID: 39; COMPND 2 MOLECULE: Ribosomal protein eL41; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 1VX1 n 1 25 PDB 1VX1 1VX1 1 25 SEQRES 1 n 23 ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU LYS SEQRES 2 n 23 ARG LYS ARG ARG LYS MET ARG GLN ARG SER ATOM 1 N ARG n 2 256.327 323.413 305.800 1.00 40.51 ATOM 2 CA ARG n 2 256.376 324.179 307.086 1.00 40.61 ATOM 3 C ARG n 2 257.559 325.152 307.084 1.00 40.92 ATOM 4 O ARG n 2 258.575 324.904 306.429 1.00 40.86 ATOM 5 CB ARG n 2 256.468 323.226 308.286 1.00 40.37 ATOM 6 CG ARG n 2 256.222 323.885 309.638 1.00 40.38 ATOM 7 CD ARG n 2 256.560 322.972 310.811 1.00 40.57 ATOM 8 NE ARG n 2 255.378 322.291 311.338 1.00 40.78 ATOM 9 CZ ARG n 2 255.286 321.751 312.552 1.00 40.99 ATOM 10 NH1 ARG n 2 254.152 321.164 312.922 1.00 41.31 ATOM 11 NH2 ARG n 2 256.309 321.794 313.406 1.00 40.71 ATOM 12 N ALA n 3 257.408 326.257 307.810 1.00 41.25 ATOM 13 CA ALA n 3 258.453 327.279 307.916 1.00 41.27 ATOM 14 C ALA n 3 259.676 326.784 308.692 1.00 40.90 ATOM 15 O ALA n 3 260.812 327.086 308.325 1.00 40.55 ATOM 16 CB ALA n 3 257.891 328.534 308.569 1.00 41.50 ATOM 17 N LYS n 4 259.431 326.031 309.761 1.00 40.89 ATOM 18 CA LYS n 4 260.495 325.519 310.633 1.00 40.82 ATOM 19 C LYS n 4 261.461 324.569 309.917 1.00 40.33 ATOM 20 O LYS n 4 262.666 324.605 310.168 1.00 39.87 ATOM 21 CB LYS n 4 259.885 324.804 311.849 1.00 40.97 ATOM 22 CG LYS n 4 260.858 324.583 312.998 1.00 40.82 ATOM 23 CD LYS n 4 260.189 323.899 314.183 1.00 40.76 ATOM 24 CE LYS n 4 261.016 324.057 315.452 1.00 40.61 ATOM 25 NZ LYS n 4 260.477 323.269 316.595 1.00 40.53 ATOM 26 N TRP n 5 260.930 323.727 309.033 1.00 40.07 ATOM 27 CA TRP n 5 261.734 322.700 308.370 1.00 40.02 ATOM 28 C TRP n 5 262.640 323.252 307.264 1.00 40.30 ATOM 29 O TRP n 5 263.681 322.660 306.969 1.00 40.49 ATOM 30 CB TRP n 5 260.841 321.586 307.807 1.00 40.02 ATOM 31 CG TRP n 5 259.990 320.849 308.834 1.00 39.91 ATOM 32 CD1 TRP n 5 258.701 320.423 308.665 1.00 39.80 ATOM 33 CD2 TRP n 5 260.367 320.454 310.165 1.00 39.66 ATOM 34 NE1 TRP n 5 258.255 319.791 309.802 1.00 39.59 ATOM 35 CE2 TRP n 5 259.257 319.797 310.737 1.00 39.42 ATOM 36 CE3 TRP n 5 261.534 320.592 310.931 1.00 39.80 ATOM 37 CZ2 TRP n 5 259.278 319.279 312.035 1.00 39.34 ATOM 38 CZ3 TRP n 5 261.552 320.077 312.223 1.00 39.59 ATOM 39 CH2 TRP n 5 260.431 319.429 312.759 1.00 39.34 ATOM 40 N ARG n 6 262.259 324.376 306.662 1.00 40.66 ATOM 41 CA ARG n 6 263.069 324.990 305.606 1.00 40.98 ATOM 42 C ARG n 6 264.249 325.789 306.171 1.00 40.81 ATOM 43 O ARG n 6 265.286 325.910 305.520 1.00 40.71 ATOM 44 CB ARG n 6 262.201 325.868 304.705 1.00 41.62 ATOM 45 CG ARG n 6 262.933 326.428 303.492 1.00 42.27 ATOM 46 CD ARG n 6 262.064 326.420 302.240 1.00 43.00 ATOM 47 NE ARG n 6 260.697 326.878 302.490 1.00 43.56 ATOM 48 CZ ARG n 6 260.329 328.151 302.644 1.00 44.00 ATOM 49 NH1 ARG n 6 261.223 329.136 302.585 1.00 44.25 ATOM 50 NH2 ARG n 6 259.050 328.441 302.866 1.00 44.12 ATOM 51 N LYS n 7 264.083 326.339 307.373 1.00 41.07 ATOM 52 CA LYS n 7 265.201 326.927 308.117 1.00 41.26 ATOM 53 C LYS n 7 266.173 325.814 308.514 1.00 41.04 ATOM 54 O LYS n 7 267.383 326.026 308.595 1.00 40.77 ATOM 55 CB LYS n 7 264.691 327.656 309.369 1.00 41.85 ATOM 56 CG LYS n 7 265.700 328.593 310.027 1.00 42.24 ATOM 57 CD LYS n 7 265.271 329.015 311.431 1.00 42.59 ATOM 58 CE LYS n 7 264.028 329.903 311.429 1.00 42.95 ATOM 59 NZ LYS n 7 263.529 330.201 312.804 1.00 42.84 ATOM 60 N LYS n 8 265.617 324.629 308.759 1.00 41.29 ATOM 61 CA LYS n 8 266.385 323.433 309.113 1.00 41.49 ATOM 62 C LYS n 8 267.104 322.844 307.895 1.00 41.46 ATOM 63 O LYS n 8 268.206 322.310 308.016 1.00 41.24 ATOM 64 CB LYS n 8 265.446 322.390 309.731 1.00 41.70 ATOM 65 CG LYS n 8 266.068 321.511 310.806 1.00 41.70 ATOM 66 CD LYS n 8 266.357 320.095 310.329 1.00 41.47 ATOM 67 CE LYS n 8 266.252 319.106 311.483 1.00 41.23 ATOM 68 NZ LYS n 8 267.257 319.359 312.553 1.00 41.10 ATOM 69 N ARG n 9 266.461 322.928 306.731 1.00 41.83 ATOM 70 CA ARG n 9 267.095 322.586 305.455 1.00 42.21 ATOM 71 C ARG n 9 268.347 323.440 305.221 1.00 42.40 ATOM 72 O ARG n 9 269.422 322.910 304.930 1.00 42.04 ATOM 73 CB ARG n 9 266.095 322.794 304.305 1.00 42.70 ATOM 74 CG ARG n 9 266.667 322.654 302.897 1.00 42.98 ATOM 75 CD ARG n 9 266.453 321.273 302.295 1.00 43.07 ATOM 76 NE ARG n 9 265.337 321.243 301.341 1.00 43.12 ATOM 77 CZ ARG n 9 264.137 320.699 301.553 1.00 43.29 ATOM 78 NH1 ARG n 9 263.834 320.110 302.708 1.00 43.24 ATOM 79 NH2 ARG n 9 263.222 320.743 300.589 1.00 43.43 ATOM 80 N MET n 10 268.190 324.758 305.354 1.00 43.07 ATOM 81 CA MET n 10 269.267 325.720 305.086 1.00 43.27 ATOM 82 C MET n 10 270.533 325.456 305.897 1.00 42.97 ATOM 83 O MET n 10 271.629 325.480 305.345 1.00 42.63 ATOM 84 CB MET n 10 268.791 327.159 305.340 1.00 43.97 ATOM 85 CG MET n 10 268.071 327.803 304.164 1.00 44.31 ATOM 86 SD MET n 10 269.199 328.302 302.845 1.00 44.98 ATOM 87 CE MET n 10 269.953 329.771 303.549 1.00 44.73 ATOM 88 N ARG n 11 270.386 325.215 307.198 1.00 43.25 ATOM 89 CA ARG n 11 271.547 324.992 308.069 1.00 43.58 ATOM 90 C ARG n 11 272.201 323.619 307.851 1.00 43.29 ATOM 91 O ARG n 11 273.366 323.432 308.201 1.00 43.25 ATOM 92 CB ARG n 11 271.189 325.215 309.547 1.00 44.29 ATOM 93 CG ARG n 11 271.168 326.691 309.951 1.00 45.28 ATOM 94 CD ARG n 11 270.578 326.915 311.338 1.00 46.16 ATOM 95 NE ARG n 11 269.218 326.382 311.410 1.00 47.34 ATOM 96 CZ ARG n 11 268.683 325.757 312.460 1.00 48.61 ATOM 97 NH1 ARG n 11 269.375 325.560 313.581 1.00 48.79 ATOM 98 NH2 ARG n 11 267.433 325.309 312.381 1.00 49.05 ATOM 99 N ARG n 12 271.461 322.671 307.275 1.00 43.43 ATOM 100 CA ARG n 12 272.051 321.406 306.802 1.00 43.64 ATOM 101 C ARG n 12 272.777 321.608 305.473 1.00 43.33 ATOM 102 O ARG n 12 273.866 321.075 305.260 1.00 42.67 ATOM 103 CB ARG n 12 270.983 320.313 306.633 1.00 44.29 ATOM 104 CG ARG n 12 270.727 319.487 307.884 1.00 44.86 ATOM 105 CD ARG n 12 269.767 318.330 307.627 1.00 45.29 ATOM 106 NE ARG n 12 269.408 317.668 308.884 1.00 45.99 ATOM 107 CZ ARG n 12 268.232 317.098 309.158 1.00 46.59 ATOM 108 NH1 ARG n 12 267.242 317.087 308.268 1.00 46.55 ATOM 109 NH2 ARG n 12 268.042 316.537 310.349 1.00 46.82 ATOM 110 N LEU n 13 272.152 322.378 304.585 1.00 43.63 ATOM 111 CA LEU n 13 272.693 322.659 303.252 1.00 43.48 ATOM 112 C LEU n 13 273.971 323.506 303.314 1.00 43.06 ATOM 113 O LEU n 13 274.915 323.270 302.559 1.00 42.01 ATOM 114 CB LEU n 13 271.615 323.359 302.406 1.00 43.91 ATOM 115 CG LEU n 13 271.814 323.617 300.903 1.00 44.19 ATOM 116 CD1 LEU n 13 272.549 324.926 300.630 1.00 44.27 ATOM 117 CD2 LEU n 13 272.506 322.444 300.218 1.00 44.25 ATOM 118 N LYS n 14 273.987 324.492 304.212 1.00 43.49 ATOM 119 CA LYS n 14 275.157 325.355 304.423 1.00 43.58 ATOM 120 C LYS n 14 276.341 324.593 305.012 1.00 43.33 ATOM 121 O LYS n 14 277.497 324.933 304.753 1.00 42.47 ATOM 122 CB LYS n 14 274.807 326.527 305.350 1.00 44.16 ATOM 123 CG LYS n 14 273.991 327.625 304.686 1.00 44.84 ATOM 124 CD LYS n 14 273.588 328.713 305.672 1.00 45.34 ATOM 125 CE LYS n 14 274.772 329.582 306.073 1.00 45.62 ATOM 126 NZ LYS n 14 274.346 330.772 306.862 1.00 45.90 ATOM 127 N ARG n 15 276.045 323.573 305.814 1.00 43.94 ATOM 128 CA ARG n 15 277.075 322.752 306.446 1.00 44.32 ATOM 129 C ARG n 15 277.810 321.862 305.431 1.00 43.96 ATOM 130 O ARG n 15 278.958 321.477 305.663 1.00 43.44 ATOM 131 CB ARG n 15 276.455 321.917 307.573 1.00 45.10 ATOM 132 CG ARG n 15 277.465 321.199 308.457 1.00 45.87 ATOM 133 CD ARG n 15 277.498 319.705 308.176 1.00 46.75 ATOM 134 NE ARG n 15 276.415 319.005 308.872 1.00 47.51 ATOM 135 CZ ARG n 15 276.482 318.524 310.116 1.00 48.35 ATOM 136 NH1 ARG n 15 277.591 318.648 310.846 1.00 48.77 ATOM 137 NH2 ARG n 15 275.427 317.908 310.638 1.00 48.49 ATOM 138 N LYS n 16 277.151 321.543 304.315 1.00 44.10 ATOM 139 CA LYS n 16 277.808 320.866 303.183 1.00 43.92 ATOM 140 C LYS n 16 278.870 321.748 302.519 1.00 43.33 ATOM 141 O LYS n 16 279.945 321.271 302.160 1.00 42.93 ATOM 142 CB LYS n 16 276.788 320.446 302.109 1.00 44.36 ATOM 143 CG LYS n 16 276.347 318.987 302.152 1.00 44.54 ATOM 144 CD LYS n 16 276.051 318.444 300.754 1.00 44.69 ATOM 145 CE LYS n 16 274.869 319.132 300.075 1.00 44.72 ATOM 146 NZ LYS n 16 273.553 318.649 300.579 1.00 44.79 ATOM 147 N ARG n 17 278.554 323.031 302.352 1.00 43.23 ATOM 148 CA ARG n 17 279.429 323.964 301.634 1.00 43.09 ATOM 149 C ARG n 17 280.721 324.272 302.399 1.00 43.64 ATOM 150 O ARG n 17 281.741 324.591 301.790 1.00 43.34 ATOM 151 CB ARG n 17 278.667 325.254 301.297 1.00 42.97 ATOM 152 CG ARG n 17 277.485 325.031 300.361 1.00 42.79 ATOM 153 CD ARG n 17 276.570 326.242 300.242 1.00 42.62 ATOM 154 NE ARG n 17 275.545 326.013 299.224 1.00 42.64 ATOM 155 CZ ARG n 17 274.795 326.958 298.657 1.00 42.83 ATOM 156 NH1 ARG n 17 274.928 328.236 298.998 1.00 42.89 ATOM 157 NH2 ARG n 17 273.902 326.619 297.733 1.00 43.14 ATOM 158 N ARG n 18 280.671 324.178 303.728 1.00 45.11 ATOM 159 CA ARG n 18 281.878 324.254 304.566 1.00 46.19 ATOM 160 C ARG n 18 282.775 323.036 304.343 1.00 46.06 ATOM 161 O ARG n 18 284.000 323.150 304.347 1.00 45.79 ATOM 162 CB ARG n 18 281.503 324.371 306.056 1.00 47.64 ATOM 163 CG ARG n 18 281.167 325.791 306.498 1.00 48.91 ATOM 164 CD ARG n 18 279.907 325.924 307.362 1.00 50.07 ATOM 165 NE ARG n 18 279.188 327.114 306.904 1.00 51.22 ATOM 166 CZ ARG n 18 279.415 328.365 307.309 1.00 51.89 ATOM 167 NH1 ARG n 18 280.309 328.641 308.259 1.00 51.90 ATOM 168 NH2 ARG n 18 278.714 329.359 306.769 1.00 52.09 ATOM 169 N LYS n 19 282.152 321.875 304.148 1.00 46.06 ATOM 170 CA LYS n 19 282.870 320.623 303.915 1.00 45.76 ATOM 171 C LYS n 19 283.587 320.637 302.559 1.00 44.85 ATOM 172 O LYS n 19 284.794 320.394 302.491 1.00 44.29 ATOM 173 CB LYS n 19 281.889 319.441 303.999 1.00 46.38 ATOM 174 CG LYS n 19 282.527 318.062 304.068 1.00 46.98 ATOM 175 CD LYS n 19 283.349 317.878 305.334 1.00 47.40 ATOM 176 CE LYS n 19 283.673 316.412 305.586 1.00 47.90 ATOM 177 NZ LYS n 19 282.536 315.672 306.202 1.00 48.07 ATOM 178 N MET n 20 282.839 320.930 301.494 1.00 44.34 ATOM 179 CA MET n 20 283.382 320.964 300.123 1.00 43.74 ATOM 180 C MET n 20 284.522 321.969 299.952 1.00 42.60 ATOM 181 O MET n 20 285.520 321.681 299.289 1.00 42.29 ATOM 182 CB MET n 20 282.271 321.271 299.101 1.00 44.13 ATOM 183 CG MET n 20 281.798 320.065 298.300 1.00 44.59 ATOM 184 SD MET n 20 282.941 319.650 296.965 1.00 45.41 ATOM 185 CE MET n 20 282.117 318.246 296.214 1.00 45.44 ATOM 186 N ARG n 21 284.361 323.147 300.545 1.00 41.79 ATOM 187 CA ARG n 21 285.349 324.220 300.436 1.00 41.44 ATOM 188 C ARG n 21 286.672 323.880 301.123 1.00 41.55 ATOM 189 O ARG n 21 287.745 324.158 300.585 1.00 41.43 ATOM 190 CB ARG n 21 284.780 325.504 301.049 1.00 41.22 ATOM 191 CG ARG n 21 285.759 326.671 301.159 1.00 40.75 ATOM 192 CD ARG n 21 285.417 327.839 300.248 1.00 40.31 ATOM 193 NE ARG n 21 285.854 329.091 300.862 1.00 39.96 ATOM 194 CZ ARG n 21 285.378 330.300 300.568 1.00 39.82 ATOM 195 NH1 ARG n 21 284.436 330.465 299.644 1.00 40.00 ATOM 196 NH2 ARG n 21 285.853 331.361 301.211 1.00 39.86 ATOM 197 N GLN n 22 286.587 323.279 302.307 1.00 41.87 ATOM 198 CA GLN n 22 287.751 323.128 303.185 1.00 42.05 ATOM 199 C GLN n 22 288.849 322.198 302.646 1.00 42.02 ATOM 200 O GLN n 22 289.995 322.280 303.092 1.00 42.14 ATOM 201 CB GLN n 22 287.302 322.677 304.579 1.00 42.17 ATOM 202 CG GLN n 22 288.336 322.908 305.675 1.00 42.28 ATOM 203 CD GLN n 22 288.967 321.631 306.203 1.00 42.67 ATOM 204 OE1 GLN n 22 288.657 320.527 305.750 1.00 42.85 ATOM 205 NE2 GLN n 22 289.851 321.780 307.184 1.00 43.13 ATOM 206 N ARG n 23 288.507 321.324 301.699 1.00 41.78 ATOM 207 CA ARG n 23 289.511 320.505 301.013 1.00 41.37 ATOM 208 C ARG n 23 290.537 321.386 300.306 1.00 41.22 ATOM 209 O ARG n 23 291.736 321.309 300.582 1.00 41.08 ATOM 210 CB ARG n 23 288.863 319.561 299.992 1.00 41.36 ATOM 211 CG ARG n 23 288.364 318.251 300.583 1.00 41.61 ATOM 212 CD ARG n 23 288.636 317.061 299.668 1.00 42.03 ATOM 213 NE ARG n 23 287.565 316.846 298.696 1.00 42.51 ATOM 214 CZ ARG n 23 287.323 315.695 298.064 1.00 42.84 ATOM 215 NH1 ARG n 23 286.310 315.614 297.206 1.00 42.91 ATOM 216 NH2 ARG n 23 288.076 314.619 298.283 1.00 42.86 ATOM 217 N SER n 24 290.048 322.225 299.399 1.00 41.16 ATOM 218 CA SER n 24 290.900 323.118 298.620 1.00 41.01 ATOM 219 C SER n 24 291.288 324.347 299.439 1.00 40.71 ATOM 220 O SER n 24 292.467 324.686 299.552 1.00 40.47 ATOM 221 CB SER n 24 290.178 323.545 297.341 1.00 40.95 ATOM 222 OG SER n 24 289.696 322.418 296.628 1.00 40.80 TER