HEADER RIBOSOME 31-AUG-04 1XBP TITLE Inhibition of peptide bond formation by pleuromutilins: The structure TITLE 2 of the 50S ribosomal subunit from Deinococcus radiodurans in complex TITLE 3 with Tiamulin COMPND MOL_ID: 6; COMPND 2 MOLECULE: 50S ribosomal protein L5; COMPND 3 CHAIN: D; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.50 ANGSTORMS DBREF 1XBP D 1 180 UNP Q9RXJ0 RL5_DEIRA 1 180 SEQRES 1 D 177 GLN LEU LYS THR LYS TYR ASN ASP GLN VAL ARG PRO ALA SEQRES 2 D 177 LEU MET GLN GLN PHE GLY TYR SER SER VAL MET ALA VAL SEQRES 3 D 177 PRO ARG ILE GLU LYS ILE VAL VAL ASN GLU GLY LEU GLY SEQRES 4 D 177 SER SER LYS GLU ASP SER LYS ALA ILE ASP LYS ALA ALA SEQRES 5 D 177 LYS GLU LEU ALA LEU ILE THR LEU GLN LYS PRO ILE ILE SEQRES 6 D 177 THR LYS ALA LYS LYS SER ILE SER ASN PHE LYS LEU ARG SEQRES 7 D 177 GLN GLY MET PRO VAL GLY ILE LYS VAL THR LEU ARG GLY SEQRES 8 D 177 GLU ARG MET TYR VAL PHE LEU GLU LYS LEU ILE ASN ILE SEQRES 9 D 177 GLY LEU PRO ARG ILE ARG ASP PHE ARG GLY ILE ASN PRO SEQRES 10 D 177 ASN ALA PHE ASP GLY ARG GLY ASN TYR ASN LEU GLY ILE SEQRES 11 D 177 LYS GLU GLN LEU ILE PHE PRO GLU ILE THR TYR ASP MET SEQRES 12 D 177 VAL ASP LYS THR ARG GLY MET ASP ILE THR ILE VAL THR SEQRES 13 D 177 THR ALA LYS THR ASP GLU GLU ALA ARG ALA LEU LEU GLN SEQRES 14 D 177 SER MET GLY LEU PRO PHE ARG LYS ATOM 1 CA GLN D 3 124.541 137.474 19.010 1.00 33.74 ATOM 2 CA LEU D 4 126.336 135.010 21.291 1.00 34.57 ATOM 3 CA LYS D 5 123.171 133.617 23.001 1.00 36.70 ATOM 4 CA THR D 6 121.679 133.780 19.552 1.00 38.19 ATOM 5 CA LYS D 7 123.294 130.416 18.623 1.00 37.97 ATOM 6 CA TYR D 8 122.618 128.728 21.969 1.00 37.21 ATOM 7 CA ASN D 9 119.217 128.697 20.249 1.00 36.43 ATOM 8 CA ASP D 10 120.036 127.013 16.935 1.00 35.78 ATOM 9 CA GLN D 11 123.664 125.862 17.052 1.00 35.25 ATOM 10 CA VAL D 12 124.204 124.929 20.658 1.00 34.98 ATOM 11 CA ARG D 13 120.805 123.263 21.072 1.00 34.92 ATOM 12 CA PRO D 14 120.761 121.955 17.485 1.00 34.82 ATOM 13 CA ALA D 15 124.170 120.559 18.513 1.00 34.86 ATOM 14 CA LEU D 16 123.957 119.183 22.010 1.00 35.52 ATOM 15 CA MET D 17 120.936 117.388 20.510 1.00 37.07 ATOM 16 CA GLN D 18 123.311 114.656 19.222 1.00 38.95 ATOM 17 CA GLN D 19 126.176 114.884 21.670 1.00 40.75 ATOM 18 CA PHE D 20 123.193 113.975 23.779 1.00 42.18 ATOM 19 CA GLY D 21 120.879 111.241 22.645 1.00 43.41 ATOM 20 CA TYR D 22 118.250 110.189 20.112 1.00 44.30 ATOM 21 CA SER D 23 114.876 111.892 20.286 1.00 44.93 ATOM 22 CA SER D 24 113.980 115.002 18.335 1.00 45.37 ATOM 23 CA VAL D 25 114.960 118.666 18.301 1.00 46.34 ATOM 24 CA MET D 26 112.254 120.086 20.569 1.00 47.76 ATOM 25 CA ALA D 27 113.244 118.074 23.655 1.00 49.82 ATOM 26 CA VAL D 28 116.233 120.155 24.643 1.00 52.09 ATOM 27 CA PRO D 29 116.715 122.901 27.182 1.00 54.77 ATOM 28 CA ARG D 30 113.724 125.195 26.679 1.00 56.97 ATOM 29 CA ILE D 31 113.571 126.694 30.193 1.00 58.53 ATOM 30 CA GLU D 32 110.337 128.699 30.519 1.00 59.30 ATOM 31 CA LYS D 33 111.483 131.673 32.666 1.00 59.79 ATOM 32 CA ILE D 34 113.506 132.883 35.659 1.00 59.90 ATOM 33 CA VAL D 35 112.451 134.757 38.848 1.00 60.09 ATOM 34 CA VAL D 36 113.588 138.057 40.426 1.00 60.53 ATOM 35 CA ASN D 37 112.254 137.721 43.993 1.00 61.01 ATOM 36 CA GLU D 38 114.367 140.342 45.771 1.00 60.99 ATOM 37 CA GLY D 39 114.446 140.549 49.531 1.00 60.42 ATOM 38 CA LEU D 40 111.608 141.340 51.880 1.00 59.46 ATOM 39 CA GLY D 41 111.861 144.737 53.603 1.00 58.20 ATOM 40 CA SER D 42 109.100 144.761 56.213 1.00 56.91 ATOM 41 CA SER D 43 111.202 144.690 59.405 1.00 55.91 ATOM 42 CA LYS D 44 113.673 147.310 58.167 1.00 55.34 ATOM 43 CA GLU D 45 112.011 150.486 56.929 1.00 55.03 ATOM 44 CA ASP D 46 108.407 150.693 55.757 1.00 54.72 ATOM 45 CA SER D 47 106.616 152.438 52.935 1.00 54.29 ATOM 46 CA LYS D 48 109.949 154.267 52.826 1.00 53.92 ATOM 47 CA ALA D 49 111.726 150.992 52.040 1.00 53.68 ATOM 48 CA ILE D 50 108.731 150.093 49.898 1.00 53.34 ATOM 49 CA ASP D 51 109.522 153.022 47.629 1.00 52.73 ATOM 50 CA LYS D 52 113.137 151.941 47.990 1.00 51.84 ATOM 51 CA ALA D 53 113.500 148.936 45.687 1.00 50.90 ATOM 52 CA ALA D 54 110.450 150.247 43.772 1.00 49.61 ATOM 53 CA LYS D 55 112.602 152.570 41.679 1.00 48.02 ATOM 54 CA GLU D 56 115.382 149.986 41.849 1.00 46.58 ATOM 55 CA LEU D 57 112.835 147.856 40.065 1.00 45.67 ATOM 56 CA ALA D 58 113.083 149.049 36.454 1.00 45.23 ATOM 57 CA LEU D 59 116.756 149.980 37.049 1.00 45.25 ATOM 58 CA ILE D 60 118.008 146.385 37.488 1.00 45.81 ATOM 59 CA THR D 61 115.666 144.748 34.988 1.00 46.92 ATOM 60 CA LEU D 62 114.063 147.836 33.422 1.00 48.15 ATOM 61 CA GLN D 63 110.812 146.519 34.829 1.00 49.26 ATOM 62 CA LYS D 64 108.594 147.587 37.737 1.00 50.52 ATOM 63 CA PRO D 65 108.177 144.975 40.453 1.00 51.96 ATOM 64 CA ILE D 66 104.886 144.209 42.200 1.00 53.53 ATOM 65 CA ILE D 67 104.709 144.036 46.010 1.00 55.15 ATOM 66 CA THR D 68 103.700 140.501 47.012 1.00 56.88 ATOM 67 CA LYS D 69 100.532 139.510 48.875 1.00 58.40 ATOM 68 CA ALA D 70 100.635 137.628 52.194 1.00 59.48 ATOM 69 CA LYS D 71 99.048 134.229 52.864 1.00 59.94 ATOM 70 CA LYS D 72 96.451 134.670 55.688 1.00 59.97 ATOM 71 CA SER D 73 99.344 134.210 58.134 1.00 59.70 ATOM 72 CA ILE D 74 98.955 135.463 61.713 1.00 59.07 ATOM 73 CA SER D 75 100.817 134.127 64.780 1.00 58.14 ATOM 74 CA ASN D 76 101.928 135.765 68.023 1.00 56.87 ATOM 75 CA PHE D 77 104.830 136.795 65.796 1.00 55.36 ATOM 76 CA LYS D 78 105.371 140.056 63.926 1.00 53.50 ATOM 77 CA LEU D 79 102.731 139.287 61.262 1.00 51.71 ATOM 78 CA ARG D 80 99.352 140.772 60.363 1.00 50.14 ATOM 79 CA GLN D 81 96.267 140.190 58.181 1.00 48.68 ATOM 80 CA GLY D 82 97.020 141.447 54.673 1.00 47.00 ATOM 81 CA MET D 83 100.386 143.109 54.122 1.00 45.06 ATOM 82 CA PRO D 84 103.132 142.957 51.518 1.00 42.96 ATOM 83 CA VAL D 85 106.781 142.255 52.224 1.00 40.79 ATOM 84 CA GLY D 86 108.525 143.534 49.101 1.00 38.95 ATOM 85 CA ILE D 87 109.386 142.688 45.491 1.00 38.01 ATOM 86 CA LYS D 88 109.658 139.966 42.818 1.00 38.08 ATOM 87 CA VAL D 89 109.718 139.923 39.017 1.00 38.84 ATOM 88 CA THR D 90 109.578 137.099 36.467 1.00 39.85 ATOM 89 CA LEU D 91 111.883 136.957 33.439 1.00 41.16 ATOM 90 CA ARG D 92 111.082 135.600 29.949 1.00 42.72 ATOM 91 CA GLY D 93 110.715 136.484 26.269 1.00 44.58 ATOM 92 CA GLU D 94 113.485 138.773 25.000 1.00 46.50 ATOM 93 CA ARG D 95 113.618 140.278 28.507 1.00 48.47 ATOM 94 CA MET D 96 114.973 137.137 30.211 1.00 50.01 ATOM 95 CA TYR D 97 117.332 137.005 27.268 1.00 50.75 ATOM 96 CA VAL D 98 118.542 140.385 28.506 1.00 50.72 ATOM 97 CA PHE D 99 118.195 139.299 32.139 1.00 50.45 ATOM 98 CA LEU D 100 120.545 136.370 31.527 1.00 50.27 ATOM 99 CA GLU D 101 123.347 137.806 29.391 1.00 50.29 ATOM 100 CA LYS D 102 123.295 140.771 31.744 1.00 50.50 ATOM 101 CA LEU D 103 124.875 139.810 35.122 1.00 50.82 ATOM 102 CA ILE D 104 127.422 137.125 34.190 1.00 51.06 ATOM 103 CA ASN D 105 129.938 138.919 31.985 1.00 51.19 ATOM 104 CA ILE D 106 129.644 141.826 34.395 1.00 51.37 ATOM 105 CA GLY D 107 128.011 140.198 37.388 1.00 51.63 ATOM 106 CA LEU D 108 130.948 138.300 38.849 1.00 51.71 ATOM 107 CA PRO D 109 133.953 139.133 36.642 1.00 51.51 ATOM 108 CA ARG D 110 135.325 140.736 39.818 1.00 50.88 ATOM 109 CA ILE D 111 134.211 141.229 43.403 1.00 49.99 ATOM 110 CA ARG D 112 135.007 140.323 47.006 1.00 49.05 ATOM 111 CA ASP D 113 134.448 137.034 48.883 1.00 48.36 ATOM 112 CA PHE D 114 133.606 135.466 45.472 1.00 48.07 ATOM 113 CA ARG D 115 134.206 131.738 44.878 1.00 47.97 ATOM 114 CA GLY D 116 133.275 128.811 42.643 1.00 47.95 ATOM 115 CA ILE D 117 131.985 125.854 44.726 1.00 47.99 ATOM 116 CA ASN D 118 128.358 124.662 45.050 1.00 47.84 ATOM 117 CA PRO D 119 126.893 121.850 47.167 1.00 47.41 ATOM 118 CA ASN D 120 123.846 119.839 46.034 1.00 46.94 ATOM 119 CA ALA D 121 121.837 121.224 43.097 1.00 46.21 ATOM 120 CA PHE D 122 118.186 120.163 42.706 1.00 44.91 ATOM 121 CA ASP D 123 118.275 116.389 42.031 1.00 43.26 ATOM 122 CA GLY D 124 114.553 116.452 41.337 1.00 41.56 ATOM 123 CA ARG D 125 113.821 119.994 40.096 1.00 39.96 ATOM 124 CA GLY D 126 114.794 121.492 36.736 1.00 38.50 ATOM 125 CA ASN D 127 115.812 124.805 38.235 1.00 37.36 ATOM 126 CA TYR D 128 119.212 125.980 39.544 1.00 36.50 ATOM 127 CA ASN D 129 118.796 128.733 42.192 1.00 36.04 ATOM 128 CA LEU D 130 122.103 130.275 43.263 1.00 36.16 ATOM 129 CA GLY D 131 123.008 131.851 46.592 1.00 37.28 ATOM 130 CA ILE D 132 123.278 135.665 46.450 1.00 39.00 ATOM 131 CA LYS D 133 124.775 137.920 49.149 1.00 41.32 ATOM 132 CA GLU D 134 123.668 141.308 50.536 1.00 43.92 ATOM 133 CA GLN D 135 126.960 143.160 49.945 1.00 46.52 ATOM 134 CA LEU D 136 126.739 143.071 46.164 1.00 48.83 ATOM 135 CA ILE D 137 129.265 144.197 43.541 1.00 50.78 ATOM 136 CA PHE D 138 128.517 144.708 39.808 1.00 52.23 ATOM 137 CA PRO D 139 127.817 147.157 36.949 1.00 52.81 ATOM 138 CA GLU D 140 124.196 148.468 37.101 1.00 52.57 ATOM 139 CA ILE D 141 124.673 149.587 40.719 1.00 51.66 ATOM 140 CA THR D 142 126.790 152.434 42.158 1.00 50.48 ATOM 141 CA TYR D 143 129.004 152.249 45.206 1.00 49.16 ATOM 142 CA ASP D 144 128.338 155.988 44.924 1.00 47.77 ATOM 143 CA MET D 145 124.584 155.308 44.886 1.00 46.41 ATOM 144 CA VAL D 146 124.136 152.745 47.701 1.00 45.28 ATOM 145 CA ASP D 147 122.070 153.453 50.871 1.00 44.58 ATOM 146 CA LYS D 148 120.936 150.075 52.171 1.00 44.58 ATOM 147 CA THR D 149 121.953 146.561 51.076 1.00 45.12 ATOM 148 CA ARG D 150 120.500 144.169 48.487 1.00 46.07 ATOM 149 CA GLY D 151 119.566 140.487 48.941 1.00 47.17 ATOM 150 CA MET D 152 117.647 139.683 45.702 1.00 48.42 ATOM 151 CA ASP D 153 117.106 136.082 44.477 1.00 49.19 ATOM 152 CA ILE D 154 117.533 133.832 41.389 1.00 49.55 ATOM 153 CA THR D 155 116.010 130.385 40.787 1.00 49.51 ATOM 154 CA ILE D 156 115.275 129.191 37.246 1.00 49.27 ATOM 155 CA VAL D 157 113.796 125.957 35.900 1.00 49.04 ATOM 156 CA THR D 158 114.484 124.385 32.492 1.00 48.99 ATOM 157 CA THR D 159 112.230 122.225 30.343 1.00 49.57 ATOM 158 CA ALA D 160 113.762 118.801 31.017 1.00 50.34 ATOM 159 CA LYS D 161 112.679 115.460 32.499 1.00 51.15 ATOM 160 CA THR D 162 116.312 114.751 33.348 1.00 51.44 ATOM 161 CA ASP D 163 118.537 116.334 36.007 1.00 51.58 ATOM 162 CA GLU D 164 121.455 115.212 33.848 1.00 51.68 ATOM 163 CA GLU D 165 119.942 117.264 31.051 1.00 52.00 ATOM 164 CA ALA D 166 119.407 120.449 33.071 1.00 52.30 ATOM 165 CA ARG D 167 122.898 120.072 34.535 1.00 52.48 ATOM 166 CA ALA D 168 124.506 120.903 31.174 1.00 52.68 ATOM 167 CA LEU D 169 122.284 124.005 31.118 1.00 52.68 ATOM 168 CA LEU D 170 124.847 125.466 33.537 1.00 52.83 ATOM 169 CA GLN D 171 127.716 124.590 31.198 1.00 53.47 ATOM 170 CA SER D 172 126.414 127.339 28.895 1.00 54.73 ATOM 171 CA MET D 173 126.898 130.968 30.052 1.00 56.16 ATOM 172 CA GLY D 174 128.103 129.468 33.328 1.00 57.80 ATOM 173 CA LEU D 175 131.655 128.367 34.144 1.00 58.91 ATOM 174 CA PRO D 176 130.646 127.309 37.669 1.00 61.27 ATOM 175 CA PHE D 177 132.810 124.145 37.655 1.00 62.73 ATOM 176 CA ARG D 178 133.015 122.970 41.313 1.00 64.04 ATOM 177 CA LYS D 179 134.713 119.625 40.629 1.00 61.91 TER