HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 3; COMPND 2 MOLECULE: DNA-directed RNA polymerase II largest subunit; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS DBREF 1Y1Y A 1 1733 UNP P04050 RPB1_YEAST 1 1733 SEQRES 1 A 122 ARG GLY ASN LEU MET GLY LYS ARG VAL ASP PHE SER ALA SEQRES 2 A 122 ARG THR VAL ILE SER GLY ASP PRO ASN LEU GLU LEU ASP SEQRES 3 A 122 GLN VAL GLY VAL PRO LYS SER ILE ALA LYS THR LEU ILE SEQRES 4 A 122 MET ASP ASN ASP PRO VAL LEU PHE ASN ARG GLN PRO SER SEQRES 5 A 122 LEU HIS LYS MET SER MET MET ALA HIS ARG VAL LYS VAL SEQRES 6 A 122 ILE PRO TYR SER THR PHE ARG LEU ASN LEU SER VAL THR SEQRES 7 A 122 SER PRO TYR ASN ALA ASP PHE ASP GLY ASP GLU MET ASN SEQRES 8 A 122 LEU HIS VAL PRO GLN SER GLU GLU THR ARG ALA GLU LEU SEQRES 9 A 122 SER GLN LEU CYS ALA VAL PRO LEU GLN ILE VAL SER PRO SEQRES 10 A 122 GLN SER ASN LYS PRO ATOM 1 CA ARG A 337 102.627 47.132 -18.266 1.00 33.80 ATOM 2 CA GLY A 338 100.994 44.001 -16.818 1.00 36.49 ATOM 3 CA ASN A 339 102.457 41.081 -18.782 1.00 40.44 ATOM 4 CA LEU A 340 105.756 42.418 -20.201 1.00 40.82 ATOM 5 CA MET A 341 107.245 44.919 -17.734 1.00 38.86 ATOM 6 CA GLY A 342 106.205 42.550 -14.935 1.00 28.77 ATOM 7 CA LYS A 343 105.381 38.861 -15.193 1.00 27.97 ATOM 8 CA ARG A 344 104.405 36.320 -12.653 1.00 39.01 ATOM 9 CA VAL A 345 107.303 33.863 -12.507 1.00 31.75 ATOM 10 CA ASP A 346 108.296 30.282 -11.867 1.00 37.33 ATOM 11 CA PHE A 347 110.908 29.372 -9.275 1.00 39.62 ATOM 12 CA SER A 348 109.574 31.868 -6.788 1.00 37.81 ATOM 13 CA ALA A 349 108.552 31.497 -3.146 1.00 28.79 ATOM 14 CA ARG A 350 107.111 33.487 -0.278 1.00 28.81 ATOM 15 CA THR A 351 106.388 33.092 3.431 1.00 32.78 ATOM 16 CA VAL A 352 106.579 34.806 6.775 1.00 35.89 ATOM 17 CA ILE A 353 110.026 35.800 7.990 1.00 31.85 ATOM 18 CA SER A 354 111.789 35.945 11.353 1.00 37.27 ATOM 19 CA GLY A 355 115.050 36.766 13.086 1.00 42.94 ATOM 20 CA ASP A 356 117.956 34.367 13.598 1.00 41.83 ATOM 21 CA PRO A 357 120.891 35.685 15.631 1.00 46.93 ATOM 22 CA ASN A 358 122.773 32.651 14.419 1.00 57.19 ATOM 23 CA LEU A 359 122.916 33.058 10.679 1.00 51.03 ATOM 24 CA GLU A 360 125.578 35.039 8.835 1.00 48.38 ATOM 25 CA LEU A 361 124.443 38.272 7.299 1.00 34.00 ATOM 26 CA ASP A 362 124.511 37.077 3.680 1.00 30.79 ATOM 27 CA GLN A 363 122.527 33.949 4.587 1.00 24.66 ATOM 28 CA VAL A 364 118.808 33.269 4.375 1.00 18.82 ATOM 29 CA GLY A 365 117.348 30.268 6.141 1.00 22.53 ATOM 30 CA VAL A 366 114.986 28.587 3.705 1.00 27.39 ATOM 31 CA PRO A 367 112.673 26.012 5.045 1.00 27.37 ATOM 32 CA LYS A 368 113.175 22.474 3.690 1.00 32.16 ATOM 33 CA SER A 369 109.605 22.463 2.468 1.00 40.06 ATOM 34 CA ILE A 370 110.624 24.967 -0.141 1.00 38.26 ATOM 35 CA ALA A 371 114.087 23.656 -0.806 1.00 38.77 ATOM 36 CA LYS A 372 112.359 20.409 -1.872 1.00 33.88 ATOM 37 CA THR A 373 110.015 22.285 -4.180 1.00 29.91 ATOM 38 CA LEU A 374 112.427 24.689 -5.856 1.00 24.81 ATOM 39 CA ILE A 436 118.061 23.839 -3.638 1.00 36.21 ATOM 40 CA MET A 437 120.894 23.071 -1.270 1.00 45.68 ATOM 41 CA ASP A 438 122.783 24.981 1.377 1.00 46.94 ATOM 42 CA ASN A 439 124.736 27.845 -0.167 1.00 48.05 ATOM 43 CA ASP A 440 122.877 28.264 -3.387 1.00 44.73 ATOM 44 CA PRO A 441 122.778 31.977 -4.208 1.00 30.10 ATOM 45 CA VAL A 442 119.256 33.355 -4.036 1.00 20.95 ATOM 46 CA LEU A 443 117.536 36.632 -4.712 1.00 20.21 ATOM 47 CA PHE A 444 115.813 37.558 -1.466 1.00 30.04 ATOM 48 CA ASN A 445 113.505 40.539 -1.159 1.00 35.83 ATOM 49 CA ARG A 446 110.647 42.438 0.469 1.00 43.13 ATOM 50 CA GLN A 447 108.133 44.673 -1.204 1.00 54.76 ATOM 51 CA PRO A 448 107.575 47.357 -1.905 1.00 56.20 ATOM 52 CA SER A 449 110.836 47.595 -3.939 1.00 57.16 ATOM 53 CA LEU A 450 112.381 51.035 -4.487 1.00 55.74 ATOM 54 CA HIS A 451 115.918 50.311 -3.334 1.00 61.72 ATOM 55 CA LYS A 452 118.927 48.504 -4.756 1.00 60.67 ATOM 56 CA MET A 453 118.766 47.136 -1.215 1.00 53.40 ATOM 57 CA SER A 454 115.302 45.730 -1.484 1.00 48.39 ATOM 58 CA MET A 455 116.561 42.718 -3.424 1.00 38.78 ATOM 59 CA MET A 456 119.864 41.266 -2.329 1.00 30.36 ATOM 60 CA ALA A 457 121.361 37.819 -3.074 1.00 31.54 ATOM 61 CA HIS A 458 121.934 35.495 -0.178 1.00 34.32 ATOM 62 CA ARG A 459 123.608 32.193 0.790 1.00 40.09 ATOM 63 CA VAL A 460 120.843 29.631 1.092 1.00 37.74 ATOM 64 CA LYS A 461 120.618 27.724 4.317 1.00 42.85 ATOM 65 CA VAL A 462 118.043 24.943 4.317 1.00 39.41 ATOM 66 CA ILE A 463 116.364 24.715 7.718 1.00 41.74 ATOM 67 CA PRO A 464 113.302 23.280 9.582 1.00 45.80 ATOM 68 CA TYR A 465 109.977 25.016 10.234 1.00 47.26 ATOM 69 CA SER A 466 108.197 27.092 7.630 1.00 36.34 ATOM 70 CA THR A 467 109.668 30.617 7.959 1.00 42.63 ATOM 71 CA PHE A 468 112.276 32.355 5.839 1.00 35.11 ATOM 72 CA ARG A 469 115.109 33.345 8.182 1.00 31.49 ATOM 73 CA LEU A 470 117.327 36.408 7.897 1.00 29.37 ATOM 74 CA ASN A 471 119.910 38.160 10.044 1.00 41.15 ATOM 75 CA LEU A 472 118.731 41.150 12.083 1.00 44.30 ATOM 76 CA SER A 473 121.263 43.645 10.789 1.00 48.01 ATOM 77 CA VAL A 474 119.963 43.041 7.287 1.00 44.60 ATOM 78 CA THR A 475 116.526 44.026 8.473 1.00 50.27 ATOM 79 CA SER A 476 116.662 47.732 7.591 1.00 57.69 ATOM 80 CA PRO A 477 117.847 47.273 4.028 1.00 59.50 ATOM 81 CA TYR A 478 114.619 45.321 3.455 1.00 58.15 ATOM 82 CA ASN A 479 112.953 47.545 6.022 1.00 66.20 ATOM 83 CA ALA A 480 111.053 44.679 7.556 1.00 67.59 ATOM 84 CA ASP A 481 109.845 43.510 10.916 1.00 72.41 ATOM 85 CA PHE A 482 108.771 40.123 12.121 1.00 64.31 ATOM 86 CA ASP A 483 105.218 41.130 12.857 1.00 65.58 ATOM 87 CA GLY A 484 104.103 38.674 10.224 1.00 61.43 ATOM 88 CA ASP A 485 105.938 40.260 7.319 1.00 59.18 ATOM 89 CA GLU A 486 105.931 38.229 4.079 1.00 57.34 ATOM 90 CA MET A 487 109.021 38.300 1.821 1.00 43.05 ATOM 91 CA ASN A 488 109.717 36.768 -1.560 1.00 38.46 ATOM 92 CA LEU A 489 112.496 34.689 -3.075 1.00 29.62 ATOM 93 CA HIS A 490 113.629 33.981 -6.585 1.00 29.49 ATOM 94 CA VAL A 491 116.014 31.227 -7.601 1.00 21.05 ATOM 95 CA PRO A 492 118.656 31.790 -10.257 1.00 25.44 ATOM 96 CA GLN A 493 118.722 29.344 -13.172 1.00 36.64 ATOM 97 CA SER A 494 121.896 29.522 -15.265 1.00 48.82 ATOM 98 CA GLU A 495 125.430 29.344 -14.005 1.00 49.29 ATOM 99 CA GLU A 496 126.020 32.908 -15.312 1.00 48.94 ATOM 100 CA THR A 497 122.797 34.061 -13.708 1.00 42.92 ATOM 101 CA ARG A 498 123.733 32.879 -10.229 1.00 46.89 ATOM 102 CA ALA A 499 127.061 34.638 -10.891 1.00 43.47 ATOM 103 CA GLU A 500 125.309 37.981 -11.418 1.00 42.97 ATOM 104 CA LEU A 501 123.673 37.543 -8.067 1.00 35.40 ATOM 105 CA SER A 502 126.879 36.462 -6.356 1.00 36.29 ATOM 106 CA GLN A 503 129.243 39.064 -7.730 1.00 38.07 ATOM 107 CA LEU A 504 126.753 41.954 -7.784 1.00 31.50 ATOM 108 CA CYS A 505 123.605 41.723 -5.709 1.00 26.36 ATOM 109 CA ALA A 506 125.130 40.154 -2.637 1.00 18.82 ATOM 110 CA VAL A 507 124.147 41.561 0.747 1.00 24.21 ATOM 111 CA PRO A 508 127.784 42.217 1.739 1.00 22.47 ATOM 112 CA LEU A 509 128.429 44.077 -1.479 1.00 27.46 ATOM 113 CA GLN A 510 125.547 46.334 -0.434 1.00 25.64 ATOM 114 CA ILE A 511 126.785 47.502 3.009 1.00 31.29 ATOM 115 CA VAL A 512 127.704 51.053 1.869 1.00 44.18 ATOM 116 CA SER A 513 124.785 52.912 0.246 1.00 45.29 ATOM 117 CA PRO A 514 125.400 55.025 -2.833 1.00 48.07 ATOM 118 CA GLN A 515 122.372 57.231 -2.153 1.00 50.46 ATOM 119 CA SER A 516 123.954 58.730 0.935 1.00 41.94 ATOM 120 CA ASN A 517 127.546 57.679 0.708 1.00 46.90 ATOM 121 CA LYS A 518 127.381 55.725 3.952 1.00 52.11 ATOM 122 CA PRO A 519 126.665 52.297 5.452 1.00 48.18 TER