HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 3; COMPND 2 MOLECULE: DNA-directed RNA polymerase II largest subunit; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS DBREF 1Y1Y A 1 1733 UNP P04050 RPB1_YEAST 1 1733 SEQRES 1 A 143 CYS MET GLY ILE VAL GLN ASP THR LEU CYS GLY ILE ARG SEQRES 2 A 143 LYS LEU THR LEU ARG ASP THR PHE ILE GLU LEU ASP GLN SEQRES 3 A 143 VAL LEU ASN MET LEU TYR TRP VAL PRO ASP TRP ASP GLY SEQRES 4 A 143 VAL ILE PRO THR PRO ALA ILE ILE LYS PRO LYS PRO LEU SEQRES 5 A 143 TRP SER GLY LYS GLN ILE LEU SER VAL ALA ILE PRO ASN SEQRES 6 A 143 GLY ILE HIS LEU GLN ARG PHE ASP GLU GLY THR THR LEU SEQRES 7 A 143 LEU SER PRO LYS ASP ASN GLY MET LEU ILE ILE ASP GLY SEQRES 8 A 143 GLN ILE ILE PHE GLY VAL VAL GLU LYS LYS THR VAL GLY SEQRES 9 A 143 SER SER ASN GLY GLY LEU ILE HIS VAL VAL THR ARG GLU SEQRES 10 A 143 LYS GLY PRO GLN VAL CYS ALA LYS LEU PHE GLY ASN ILE SEQRES 11 A 143 GLN LYS VAL VAL ASN PHE TRP LEU LEU HIS ASN GLY PHE ATOM 1 CA CYS A 520 123.000 51.173 5.226 1.00 47.71 ATOM 2 CA MET A 521 123.211 48.300 7.688 1.00 49.54 ATOM 3 CA GLY A 522 123.868 48.571 11.401 1.00 48.80 ATOM 4 CA ILE A 523 123.551 46.616 14.625 1.00 38.14 ATOM 5 CA VAL A 524 120.294 46.727 16.497 1.00 42.18 ATOM 6 CA GLN A 525 118.268 45.777 19.536 1.00 47.97 ATOM 7 CA ASP A 526 119.735 43.162 21.829 1.00 48.88 ATOM 8 CA THR A 527 123.111 43.062 20.042 1.00 46.70 ATOM 9 CA LEU A 528 123.379 46.850 20.198 1.00 46.73 ATOM 10 CA CYS A 529 121.639 47.484 23.531 1.00 45.64 ATOM 11 CA GLY A 530 123.966 44.804 24.859 1.00 42.03 ATOM 12 CA ILE A 531 127.305 45.496 23.178 1.00 52.43 ATOM 13 CA ARG A 532 127.252 48.587 25.326 1.00 60.96 ATOM 14 CA LYS A 533 126.479 46.894 28.652 1.00 57.65 ATOM 15 CA LEU A 534 129.279 44.543 27.791 1.00 61.92 ATOM 16 CA THR A 535 131.701 47.404 27.109 1.00 71.50 ATOM 17 CA LEU A 536 131.581 49.606 30.268 1.00 75.70 ATOM 18 CA ARG A 537 134.692 49.934 32.445 1.00 79.34 ATOM 19 CA ASP A 538 132.435 48.626 35.230 1.00 84.08 ATOM 20 CA THR A 539 131.902 45.366 33.318 1.00 85.07 ATOM 21 CA PHE A 540 134.268 42.525 34.225 1.00 87.87 ATOM 22 CA ILE A 541 134.062 38.906 33.068 1.00 86.59 ATOM 23 CA GLU A 542 135.664 35.913 34.816 1.00 90.99 ATOM 24 CA LEU A 543 137.472 32.876 33.316 1.00 79.09 ATOM 25 CA ASP A 544 134.760 30.248 32.959 1.00 83.44 ATOM 26 CA GLN A 545 132.674 32.559 30.765 1.00 78.07 ATOM 27 CA VAL A 546 135.511 34.409 29.034 1.00 67.17 ATOM 28 CA LEU A 547 136.319 31.070 27.465 1.00 64.59 ATOM 29 CA ASN A 548 132.887 30.167 26.084 1.00 59.24 ATOM 30 CA MET A 549 132.811 33.600 24.440 1.00 51.70 ATOM 31 CA LEU A 550 136.238 33.257 22.918 1.00 48.03 ATOM 32 CA TYR A 551 134.970 29.925 21.614 1.00 53.19 ATOM 33 CA TRP A 552 131.837 31.370 20.056 1.00 53.50 ATOM 34 CA VAL A 553 133.968 33.520 17.827 1.00 55.46 ATOM 35 CA PRO A 554 134.718 31.282 14.826 1.00 62.92 ATOM 36 CA ASP A 555 138.006 32.953 13.958 1.00 77.73 ATOM 37 CA TRP A 556 139.449 33.113 17.430 1.00 77.68 ATOM 38 CA ASP A 557 143.132 32.398 16.906 1.00 80.62 ATOM 39 CA GLY A 558 142.661 30.170 19.953 1.00 72.31 ATOM 40 CA VAL A 559 144.757 32.392 22.140 1.00 63.55 ATOM 41 CA ILE A 560 143.202 33.048 25.514 1.00 61.43 ATOM 42 CA PRO A 561 144.134 36.774 25.875 1.00 59.81 ATOM 43 CA THR A 562 146.053 37.817 28.959 1.00 65.60 ATOM 44 CA PRO A 563 143.525 39.191 31.538 1.00 68.76 ATOM 45 CA ALA A 564 143.215 42.929 32.069 1.00 71.50 ATOM 46 CA ILE A 565 143.400 42.129 35.739 1.00 71.44 ATOM 47 CA ILE A 566 145.510 39.418 37.448 1.00 77.71 ATOM 48 CA LYS A 567 146.081 40.493 41.082 1.00 95.65 ATOM 49 CA PRO A 568 143.942 38.303 43.285 1.00 98.94 ATOM 50 CA LYS A 569 141.350 37.076 40.775 1.00 91.33 ATOM 51 CA PRO A 570 142.166 37.214 37.064 1.00 80.70 ATOM 52 CA LEU A 571 139.398 39.037 35.178 1.00 68.62 ATOM 53 CA TRP A 572 138.790 40.325 31.664 1.00 63.39 ATOM 54 CA SER A 573 136.983 43.468 30.547 1.00 66.27 ATOM 55 CA GLY A 574 134.015 43.299 28.264 1.00 64.42 ATOM 56 CA LYS A 575 135.874 45.580 25.931 1.00 62.01 ATOM 57 CA GLN A 576 138.757 43.120 26.084 1.00 56.28 ATOM 58 CA ILE A 577 137.043 40.119 24.543 1.00 51.56 ATOM 59 CA LEU A 578 134.608 42.015 22.319 1.00 49.89 ATOM 60 CA SER A 579 137.885 43.113 20.800 1.00 51.72 ATOM 61 CA VAL A 580 138.478 39.555 19.761 1.00 48.69 ATOM 62 CA ALA A 581 135.732 40.219 17.208 1.00 50.08 ATOM 63 CA ILE A 582 137.681 43.102 15.731 1.00 53.35 ATOM 64 CA PRO A 583 140.335 41.974 13.210 1.00 60.95 ATOM 65 CA ASN A 584 143.872 43.267 13.222 1.00 77.59 ATOM 66 CA GLY A 585 144.913 46.446 11.445 1.00 85.13 ATOM 67 CA ILE A 586 141.781 48.305 12.489 1.00 83.60 ATOM 68 CA HIS A 587 142.178 51.896 13.595 1.00 94.55 ATOM 69 CA LEU A 588 139.621 54.284 14.976 1.00 91.10 ATOM 70 CA GLN A 589 139.695 57.678 16.706 1.00 94.50 ATOM 71 CA ARG A 590 136.520 59.332 17.916 1.00 96.96 ATOM 72 CA PHE A 591 136.289 62.032 20.639 1.00104.00 ATOM 73 CA ASP A 592 132.692 62.872 21.616 1.00111.23 ATOM 74 CA GLU A 593 132.405 65.750 24.092 1.00110.31 ATOM 75 CA GLY A 594 134.528 65.612 27.223 1.00103.70 ATOM 76 CA THR A 595 137.100 63.414 25.507 1.00 94.55 ATOM 77 CA THR A 596 140.793 63.505 26.375 1.00 96.47 ATOM 78 CA LEU A 597 142.819 60.334 25.714 1.00 93.11 ATOM 79 CA LEU A 598 141.743 59.472 29.257 1.00 89.34 ATOM 80 CA SER A 599 138.065 60.191 28.663 1.00 92.74 ATOM 81 CA PRO A 600 136.772 60.229 32.244 1.00 97.36 ATOM 82 CA LYS A 601 133.179 59.811 31.117 1.00101.18 ATOM 83 CA ASP A 602 134.509 57.018 28.894 1.00 93.84 ATOM 84 CA ASN A 603 133.362 59.010 25.879 1.00 89.88 ATOM 85 CA GLY A 604 134.531 58.838 22.325 1.00 86.85 ATOM 86 CA MET A 605 136.620 55.787 21.540 1.00 74.18 ATOM 87 CA LEU A 606 140.014 54.540 20.476 1.00 69.98 ATOM 88 CA ILE A 607 140.610 51.236 18.715 1.00 68.35 ATOM 89 CA ILE A 608 144.137 50.170 17.847 1.00 74.17 ATOM 90 CA ASP A 609 145.392 47.193 15.809 1.00 76.09 ATOM 91 CA GLY A 610 141.881 45.906 16.302 1.00 77.21 ATOM 92 CA GLN A 611 141.715 46.389 20.077 1.00 73.19 ATOM 93 CA ILE A 612 139.318 48.654 21.980 1.00 62.27 ATOM 94 CA ILE A 613 141.691 50.847 23.938 1.00 60.93 ATOM 95 CA PHE A 614 139.031 53.017 25.526 1.00 59.08 ATOM 96 CA GLY A 615 135.442 54.183 25.264 1.00 55.69 ATOM 97 CA VAL A 616 131.944 52.723 25.483 1.00 53.09 ATOM 98 CA VAL A 617 130.745 51.064 22.303 1.00 60.09 ATOM 99 CA GLU A 618 127.304 51.961 20.988 1.00 59.54 ATOM 100 CA LYS A 619 125.237 53.204 18.038 1.00 58.73 ATOM 101 CA LYS A 620 127.737 55.871 17.002 1.00 64.86 ATOM 102 CA THR A 621 130.565 53.373 17.015 1.00 60.32 ATOM 103 CA VAL A 622 128.856 50.266 15.724 1.00 63.92 ATOM 104 CA GLY A 623 125.808 51.562 13.832 1.00 69.45 ATOM 105 CA SER A 624 125.130 52.638 10.246 1.00 73.00 ATOM 106 CA SER A 625 127.093 55.836 10.953 1.00 81.76 ATOM 107 CA ASN A 626 129.664 57.314 8.533 1.00 82.56 ATOM 108 CA GLY A 627 133.129 56.777 9.975 1.00 70.98 ATOM 109 CA GLY A 628 131.701 53.921 12.060 1.00 62.73 ATOM 110 CA LEU A 629 133.378 50.586 12.827 1.00 52.67 ATOM 111 CA ILE A 630 131.640 49.002 9.901 1.00 50.20 ATOM 112 CA HIS A 631 132.413 51.790 7.364 1.00 56.12 ATOM 113 CA VAL A 632 136.072 51.243 8.143 1.00 50.37 ATOM 114 CA VAL A 633 136.319 47.485 8.079 1.00 57.15 ATOM 115 CA THR A 634 134.421 47.414 4.797 1.00 62.50 ATOM 116 CA ARG A 635 136.754 49.943 3.192 1.00 72.28 ATOM 117 CA GLU A 636 139.844 48.646 4.960 1.00 75.37 ATOM 118 CA LYS A 637 139.571 44.834 5.056 1.00 72.85 ATOM 119 CA GLY A 638 137.000 43.901 2.402 1.00 75.78 ATOM 120 CA PRO A 639 133.224 43.424 2.023 1.00 74.41 ATOM 121 CA GLN A 640 133.723 39.787 2.939 1.00 75.87 ATOM 122 CA VAL A 641 135.597 40.471 6.174 1.00 60.53 ATOM 123 CA CYS A 642 132.870 42.902 7.140 1.00 53.33 ATOM 124 CA ALA A 643 129.855 40.663 6.856 1.00 60.38 ATOM 125 CA LYS A 644 131.817 38.114 8.838 1.00 66.36 ATOM 126 CA LEU A 645 132.232 40.892 11.385 1.00 54.98 ATOM 127 CA PHE A 646 128.576 41.434 12.278 1.00 47.70 ATOM 128 CA GLY A 647 128.443 37.775 13.099 1.00 46.02 ATOM 129 CA ASN A 648 131.227 37.614 15.582 1.00 44.45 ATOM 130 CA ILE A 649 130.084 40.787 17.353 1.00 37.06 ATOM 131 CA GLN A 650 126.491 39.527 17.449 1.00 38.21 ATOM 132 CA LYS A 651 127.391 36.066 18.588 1.00 40.57 ATOM 133 CA VAL A 652 129.792 37.196 21.304 1.00 33.44 ATOM 134 CA VAL A 653 127.519 39.977 22.485 1.00 31.83 ATOM 135 CA ASN A 654 124.167 38.203 22.235 1.00 40.15 ATOM 136 CA PHE A 655 125.684 35.304 24.158 1.00 47.77 ATOM 137 CA TRP A 656 126.880 37.575 26.922 1.00 48.33 ATOM 138 CA LEU A 657 123.519 39.388 26.925 1.00 46.74 ATOM 139 CA LEU A 658 121.758 36.016 27.153 1.00 54.11 ATOM 140 CA HIS A 659 123.373 35.589 30.562 1.00 61.86 ATOM 141 CA ASN A 660 123.544 39.176 31.868 1.00 60.44 ATOM 142 CA GLY A 661 119.864 39.519 30.971 1.00 53.51 ATOM 143 CA PHE A 662 117.847 42.594 30.103 1.00 48.74 TER