HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 4; COMPND 2 MOLECULE: DNA-directed RNA polymerase II 140 kDa polypeptide; COMPND 3 CHAIN: B; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE B 669 REMARK 465 GLU B 670 REMARK 465 GLY B 671 REMARK 465 GLY B 672 REMARK 465 PHE B 673 REMARK 465 GLU B 674 REMARK 465 ASP B 675 REMARK 465 VAL B 676 REMARK 465 GLU B 677 REMARK 465 ASN B 716 REMARK 465 GLU B 717 REMARK 465 GLU B 718 REMARK 465 ASN B 719 REMARK 465 ASP B 720 REMARK 465 LEU B 721 DBREF 1Y1Y B 1 1224 UNP P08518 RPB2_YEAST 1 1224 SEQRES 1 B 183 GLY ARG VAL TYR ARG PRO LEU PHE ILE VAL GLU ASP ASP SEQRES 2 B 183 GLU SER LEU GLY HIS LYS GLU LEU LYS VAL ARG LYS GLY SEQRES 3 B 183 HIS ILE ALA LYS LEU MET ALA THR GLU TYR GLN ASP ILE SEQRES 4 B 183 GLU GLY GLY PHE GLU ASP VAL GLU GLU TYR THR TRP SER SEQRES 5 B 183 SER LEU LEU ASN GLU GLY LEU VAL GLU TYR ILE ASP ALA SEQRES 6 B 183 GLU GLU GLU GLU SER ILE LEU ILE ALA MET GLN PRO GLU SEQRES 7 B 183 ASP LEU GLU PRO ALA GLU ALA ASN GLU GLU ASN ASP LEU SEQRES 8 B 183 ASP VAL ASP PRO ALA LYS ARG ILE ARG VAL SER HIS HIS SEQRES 9 B 183 ALA THR THR PHE THR HIS CYS GLU ILE HIS PRO SER MET SEQRES 10 B 183 ILE LEU GLY VAL ALA ALA SER ILE ILE PRO PHE PRO ASP SEQRES 11 B 183 HIS ASN GLN SER PRO ARG ASN THR TYR GLN SER ALA MET SEQRES 12 B 183 GLY LYS GLN ALA MET GLY VAL PHE LEU THR ASN TYR ASN SEQRES 13 B 183 VAL ARG MET ASP THR MET ALA ASN ILE LEU TYR TYR PRO SEQRES 14 B 183 GLN LYS PRO LEU GLY THR THR ARG ALA MET GLU TYR LEU SEQRES 15 B 183 LYS ATOM 1 CA GLY B 631 69.074 60.119 11.199 1.00 70.72 ATOM 2 CA ARG B 632 70.256 62.059 14.158 1.00 58.94 ATOM 3 CA VAL B 633 72.911 60.409 16.283 1.00 55.54 ATOM 4 CA TYR B 634 72.223 61.075 19.960 1.00 54.91 ATOM 5 CA ARG B 635 73.545 59.965 23.327 1.00 59.96 ATOM 6 CA PRO B 636 71.910 60.023 26.784 1.00 61.76 ATOM 7 CA LEU B 637 72.652 62.275 29.806 1.00 66.41 ATOM 8 CA PHE B 638 71.806 63.002 33.464 1.00 83.70 ATOM 9 CA ILE B 639 69.831 66.183 34.076 1.00 94.71 ATOM 10 CA VAL B 640 71.061 68.636 36.694 1.00111.55 ATOM 11 CA GLU B 641 68.266 71.237 37.078 1.00135.87 ATOM 12 CA ASP B 642 69.242 73.192 40.221 1.00151.49 ATOM 13 CA ASP B 643 65.609 73.045 41.358 1.00164.22 ATOM 14 CA GLU B 644 66.880 71.809 44.727 1.00167.98 ATOM 15 CA SER B 645 65.321 74.161 47.289 1.00169.36 ATOM 16 CA LEU B 646 67.865 72.520 49.604 1.00165.43 ATOM 17 CA GLY B 647 71.090 73.813 48.132 1.00158.50 ATOM 18 CA HIS B 648 72.747 74.540 44.814 1.00153.60 ATOM 19 CA LYS B 649 72.456 72.788 41.450 1.00144.26 ATOM 20 CA GLU B 650 72.085 68.973 41.543 1.00135.97 ATOM 21 CA LEU B 651 71.356 65.792 39.555 1.00131.24 ATOM 22 CA LYS B 652 67.621 65.174 39.578 1.00132.27 ATOM 23 CA VAL B 653 68.415 61.470 39.935 1.00125.93 ATOM 24 CA ARG B 654 69.174 60.336 43.493 1.00124.90 ATOM 25 CA LYS B 655 70.527 57.325 45.444 1.00112.91 ATOM 26 CA GLY B 656 66.949 56.165 45.857 1.00108.43 ATOM 27 CA HIS B 657 66.302 55.903 42.135 1.00105.39 ATOM 28 CA ILE B 658 69.429 53.772 41.914 1.00102.56 ATOM 29 CA ALA B 659 68.771 51.304 44.724 1.00107.14 ATOM 30 CA LYS B 660 65.257 51.077 43.249 1.00108.54 ATOM 31 CA LEU B 661 67.112 49.939 40.114 1.00110.70 ATOM 32 CA MET B 662 69.589 47.460 41.604 1.00122.23 ATOM 33 CA ALA B 663 66.392 46.090 43.098 1.00133.56 ATOM 34 CA THR B 664 65.151 45.120 39.657 1.00137.69 ATOM 35 CA GLU B 665 68.645 43.807 38.893 1.00149.17 ATOM 36 CA TYR B 666 68.410 41.361 41.799 1.00160.69 ATOM 37 CA GLN B 667 65.303 39.825 40.223 1.00162.32 ATOM 38 CA ASP B 668 67.307 38.002 37.531 1.00164.49 ATOM 39 CA GLU B 678 59.417 47.016 37.100 1.00126.49 ATOM 40 CA TYR B 679 61.821 49.998 37.159 1.00118.37 ATOM 41 CA THR B 680 63.402 50.071 33.664 1.00107.37 ATOM 42 CA TRP B 681 65.278 52.599 31.561 1.00 94.65 ATOM 43 CA SER B 682 61.953 53.701 30.090 1.00100.89 ATOM 44 CA SER B 683 61.283 54.798 33.662 1.00106.80 ATOM 45 CA LEU B 684 64.260 57.131 34.123 1.00 98.28 ATOM 46 CA LEU B 685 63.166 58.645 30.827 1.00108.65 ATOM 47 CA ASN B 686 59.433 59.152 31.459 1.00113.88 ATOM 48 CA GLU B 687 60.326 60.362 34.955 1.00107.39 ATOM 49 CA GLY B 688 62.506 63.017 33.394 1.00101.52 ATOM 50 CA LEU B 689 65.832 62.149 35.013 1.00 91.88 ATOM 51 CA VAL B 690 67.832 61.674 31.818 1.00 78.67 ATOM 52 CA GLU B 691 67.441 62.953 28.250 1.00 77.98 ATOM 53 CA TYR B 692 68.462 62.077 24.674 1.00 87.42 ATOM 54 CA ILE B 693 70.689 65.011 23.552 1.00 86.83 ATOM 55 CA ASP B 694 71.914 64.995 19.942 1.00 81.42 ATOM 56 CA ALA B 695 74.875 66.916 18.460 1.00 79.88 ATOM 57 CA GLU B 696 72.880 69.987 17.476 1.00 81.87 ATOM 58 CA GLU B 697 71.149 70.296 20.881 1.00 81.05 ATOM 59 CA GLU B 698 74.497 69.561 22.516 1.00 82.92 ATOM 60 CA GLU B 699 75.765 72.920 21.271 1.00 81.82 ATOM 61 CA SER B 700 73.419 74.836 23.591 1.00 80.03 ATOM 62 CA ILE B 701 74.210 73.131 26.885 1.00 66.07 ATOM 63 CA LEU B 702 76.837 72.549 29.518 1.00 67.18 ATOM 64 CA ILE B 703 77.896 69.124 30.815 1.00 73.19 ATOM 65 CA ALA B 704 79.624 67.755 33.918 1.00 85.90 ATOM 66 CA MET B 705 82.178 64.989 33.581 1.00100.31 ATOM 67 CA GLN B 706 81.781 63.353 36.921 1.00119.13 ATOM 68 CA PRO B 707 78.535 63.636 38.884 1.00130.43 ATOM 69 CA GLU B 708 80.408 63.869 42.141 1.00146.39 ATOM 70 CA ASP B 709 83.860 65.553 41.948 1.00158.37 ATOM 71 CA LEU B 710 82.318 68.282 39.703 1.00159.65 ATOM 72 CA GLU B 711 79.589 69.416 42.128 1.00164.65 ATOM 73 CA PRO B 712 80.308 70.078 45.858 1.00174.91 ATOM 74 CA ALA B 713 81.918 73.184 47.286 1.00184.19 ATOM 75 CA GLU B 714 85.546 74.116 47.914 1.00192.32 ATOM 76 CA ALA B 715 86.354 74.436 51.629 1.00194.93 ATOM 77 CA ASP B 722 95.553 66.959 50.591 1.00188.07 ATOM 78 CA VAL B 723 95.351 65.704 46.986 1.00187.60 ATOM 79 CA ASP B 724 96.928 62.357 46.061 1.00187.10 ATOM 80 CA PRO B 725 100.520 62.692 44.751 1.00184.97 ATOM 81 CA ALA B 726 99.966 59.629 42.573 1.00178.21 ATOM 82 CA LYS B 727 96.676 60.217 40.741 1.00171.38 ATOM 83 CA ARG B 728 96.316 62.296 37.605 1.00171.49 ATOM 84 CA ILE B 729 95.370 66.007 37.615 1.00175.47 ATOM 85 CA ARG B 730 91.791 66.928 36.680 1.00180.34 ATOM 86 CA VAL B 731 91.000 70.644 36.301 1.00186.68 ATOM 87 CA SER B 732 88.084 72.091 38.299 1.00189.71 ATOM 88 CA HIS B 733 84.356 72.862 38.555 1.00186.45 ATOM 89 CA HIS B 734 84.532 76.606 37.708 1.00176.75 ATOM 90 CA ALA B 735 80.847 76.967 36.779 1.00154.98 ATOM 91 CA THR B 736 77.373 76.678 38.263 1.00133.54 ATOM 92 CA THR B 737 75.402 76.263 35.063 1.00115.03 ATOM 93 CA PHE B 738 75.680 72.503 34.440 1.00 99.09 ATOM 94 CA THR B 739 72.542 71.586 32.488 1.00 85.88 ATOM 95 CA HIS B 740 73.480 67.916 32.280 1.00 71.33 ATOM 96 CA CYS B 741 76.090 65.367 33.445 1.00 66.18 ATOM 97 CA GLU B 742 77.834 62.438 31.744 1.00 68.31 ATOM 98 CA ILE B 743 76.749 58.928 32.930 1.00 63.05 ATOM 99 CA HIS B 744 80.350 57.813 32.558 1.00 66.86 ATOM 100 CA PRO B 745 83.030 59.069 30.166 1.00 65.61 ATOM 101 CA SER B 746 84.088 55.614 29.012 1.00 58.07 ATOM 102 CA MET B 747 80.969 55.547 26.889 1.00 57.20 ATOM 103 CA ILE B 748 82.649 57.790 24.289 1.00 51.31 ATOM 104 CA LEU B 749 84.304 54.595 23.127 1.00 45.45 ATOM 105 CA GLY B 750 83.185 51.936 20.705 1.00 48.60 ATOM 106 CA VAL B 751 83.007 48.152 20.883 1.00 53.10 ATOM 107 CA ALA B 752 86.653 47.786 19.961 1.00 45.46 ATOM 108 CA ALA B 753 88.321 50.170 22.325 1.00 53.13 ATOM 109 CA SER B 754 85.955 49.221 25.158 1.00 56.04 ATOM 110 CA ILE B 755 88.067 46.043 25.510 1.00 54.91 ATOM 111 CA ILE B 756 91.387 47.847 25.676 1.00 48.31 ATOM 112 CA PRO B 757 92.540 48.050 29.347 1.00 43.88 ATOM 113 CA PHE B 758 93.783 51.478 30.399 1.00 39.67 ATOM 114 CA PRO B 759 93.467 53.003 26.850 1.00 45.89 ATOM 115 CA ASP B 760 94.073 56.143 28.840 1.00 56.02 ATOM 116 CA HIS B 761 97.732 55.269 29.137 1.00 63.01 ATOM 117 CA ASN B 762 98.750 54.861 25.519 1.00 62.96 ATOM 118 CA GLN B 763 99.716 56.933 22.533 1.00 63.14 ATOM 119 CA SER B 764 96.343 57.538 20.836 1.00 65.65 ATOM 120 CA PRO B 765 97.393 55.607 17.746 1.00 61.20 ATOM 121 CA ARG B 766 98.281 52.462 19.680 1.00 54.97 ATOM 122 CA ASN B 767 94.611 52.056 20.518 1.00 50.62 ATOM 123 CA THR B 768 93.575 52.763 16.950 1.00 53.98 ATOM 124 CA TYR B 769 95.438 49.674 15.738 1.00 59.04 ATOM 125 CA GLN B 770 94.367 47.362 18.607 1.00 56.41 ATOM 126 CA SER B 771 90.843 48.148 17.387 1.00 63.92 ATOM 127 CA ALA B 772 91.716 46.634 14.065 1.00 75.12 ATOM 128 CA MET B 773 93.210 43.420 15.396 1.00 75.55 ATOM 129 CA GLY B 774 90.752 42.299 17.999 1.00 79.23 ATOM 130 CA LYS B 775 88.962 41.648 14.689 1.00 77.25 ATOM 131 CA GLN B 776 91.689 39.339 13.500 1.00 72.45 ATOM 132 CA ALA B 777 91.780 37.361 16.734 1.00 65.66 ATOM 133 CA MET B 778 90.055 34.110 17.597 1.00 60.60 ATOM 134 CA GLY B 779 87.509 33.149 20.228 1.00 65.62 ATOM 135 CA VAL B 780 83.930 31.867 20.528 1.00 58.34 ATOM 136 CA PHE B 781 81.831 33.751 17.991 1.00 58.87 ATOM 137 CA LEU B 782 78.659 32.077 19.371 1.00 59.57 ATOM 138 CA THR B 783 77.981 28.814 21.173 1.00 57.28 ATOM 139 CA ASN B 784 76.007 27.061 18.499 1.00 58.56 ATOM 140 CA TYR B 785 79.103 26.661 16.341 1.00 61.89 ATOM 141 CA ASN B 786 78.886 22.894 16.568 1.00 77.41 ATOM 142 CA VAL B 787 75.678 23.315 14.567 1.00 75.00 ATOM 143 CA ARG B 788 76.742 26.015 12.145 1.00 79.68 ATOM 144 CA MET B 789 77.700 25.428 8.517 1.00 81.37 ATOM 145 CA ASP B 790 79.432 28.732 7.695 1.00 77.55 ATOM 146 CA THR B 791 82.502 28.776 5.413 1.00 69.49 ATOM 147 CA MET B 792 85.541 29.106 7.646 1.00 57.48 ATOM 148 CA ALA B 793 85.560 29.820 11.386 1.00 41.01 ATOM 149 CA ASN B 794 87.950 29.576 14.291 1.00 44.24 ATOM 150 CA ILE B 795 87.571 28.518 17.910 1.00 45.18 ATOM 151 CA LEU B 796 90.063 28.609 20.666 1.00 45.61 ATOM 152 CA TYR B 797 90.417 25.257 22.471 1.00 48.84 ATOM 153 CA TYR B 798 90.848 26.886 25.854 1.00 50.38 ATOM 154 CA PRO B 799 89.432 30.417 26.078 1.00 50.72 ATOM 155 CA GLN B 800 90.101 32.411 29.228 1.00 58.02 ATOM 156 CA LYS B 801 88.279 35.504 30.519 1.00 64.33 ATOM 157 CA PRO B 802 91.000 38.159 30.912 1.00 50.84 ATOM 158 CA LEU B 803 92.492 39.026 34.297 1.00 49.39 ATOM 159 CA GLY B 804 92.438 42.730 33.395 1.00 54.98 ATOM 160 CA THR B 805 88.957 44.036 32.503 1.00 56.66 ATOM 161 CA THR B 806 86.607 46.915 31.686 1.00 67.83 ATOM 162 CA ARG B 807 83.250 47.258 33.387 1.00 74.21 ATOM 163 CA ALA B 808 82.308 47.978 29.780 1.00 68.87 ATOM 164 CA MET B 809 82.907 44.366 28.980 1.00 71.53 ATOM 165 CA GLU B 810 79.900 43.363 31.074 1.00 75.39 ATOM 166 CA TYR B 811 77.578 44.508 28.273 1.00 71.51 ATOM 167 CA LEU B 812 79.810 43.128 25.559 1.00 76.53 ATOM 168 CA LYS B 813 79.351 39.635 27.031 1.00 74.89 TER