HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 4; COMPND 2 MOLECULE: DNA-directed RNA polymerase II 140 kDa polypeptide; COMPND 3 CHAIN: B; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 336 REMARK 465 ARG B 337 REMARK 465 GLY B 338 REMARK 465 THR B 339 REMARK 465 ALA B 340 REMARK 465 LEU B 341 REMARK 465 GLY B 342 REMARK 465 ILE B 343 REMARK 465 LYS B 344 DBREF 1Y1Y B 1 1224 UNP P08518 RPB2_YEAST 1 1224 SEQRES 1 B 186 ALA GLY ASN ILE VAL GLN VAL PHE LYS LYS ALA ALA PRO SEQRES 2 B 186 SER PRO ILE SER HIS VAL ALA GLU ILE ARG SER ALA LEU SEQRES 3 B 186 GLU LYS GLY SER ARG PHE ILE SER THR LEU GLN VAL LYS SEQRES 4 B 186 LEU TYR GLY ARG GLU GLY SER SER ALA ARG THR ILE LYS SEQRES 5 B 186 ALA THR LEU PRO TYR ILE LYS GLN ASP ILE PRO ILE VAL SEQRES 6 B 186 ILE ILE PHE ARG ALA LEU GLY ILE ILE PRO ASP GLY GLU SEQRES 7 B 186 ILE LEU GLU HIS ILE CYS TYR ASP VAL ASN ASP TRP GLN SEQRES 8 B 186 MET LEU GLU MET LEU LYS PRO CYS VAL GLU ASP GLY PHE SEQRES 9 B 186 VAL ILE GLN ASP ARG GLU THR ALA LEU ASP PHE ILE GLY SEQRES 10 B 186 ARG ARG GLY THR ALA LEU GLY ILE LYS LYS GLU LYS ARG SEQRES 11 B 186 ILE GLN TYR ALA LYS ASP ILE LEU GLN LYS GLU PHE LEU SEQRES 12 B 186 PRO HIS ILE THR GLN LEU GLU GLY PHE GLU SER ARG LYS SEQRES 13 B 186 ALA PHE PHE LEU GLY TYR MET ILE ASN ARG LEU LEU LEU SEQRES 14 B 186 CYS ALA LEU ASP ARG LYS ASP GLN ASP ASP ARG ASP HIS SEQRES 15 B 186 PHE GLY LYS LYS ATOM 1 CA ALA B 219 71.463 66.450 6.535 1.00 82.49 ATOM 2 CA GLY B 220 68.572 67.917 4.555 1.00 91.04 ATOM 3 CA ASN B 221 66.373 71.003 4.369 1.00 96.40 ATOM 4 CA ILE B 222 68.859 73.359 5.980 1.00 96.16 ATOM 5 CA VAL B 223 70.489 76.606 4.956 1.00 93.63 ATOM 6 CA GLN B 224 74.259 76.909 4.764 1.00 90.96 ATOM 7 CA VAL B 225 76.520 79.663 3.505 1.00 93.56 ATOM 8 CA PHE B 226 79.824 79.088 1.757 1.00103.89 ATOM 9 CA LYS B 227 82.754 81.247 0.688 1.00113.84 ATOM 10 CA LYS B 228 84.022 80.540 -2.797 1.00124.45 ATOM 11 CA ALA B 229 87.566 80.402 -4.186 1.00135.21 ATOM 12 CA ALA B 230 89.357 83.638 -4.996 1.00140.25 ATOM 13 CA PRO B 231 89.312 82.776 -8.749 1.00139.18 ATOM 14 CA SER B 232 85.564 83.056 -9.414 1.00133.41 ATOM 15 CA PRO B 233 82.821 85.573 -10.171 1.00124.42 ATOM 16 CA ILE B 234 80.762 84.256 -7.231 1.00108.55 ATOM 17 CA SER B 235 81.625 85.566 -3.784 1.00100.28 ATOM 18 CA HIS B 236 79.453 83.724 -1.327 1.00 94.77 ATOM 19 CA VAL B 237 76.580 81.247 -1.492 1.00 86.33 ATOM 20 CA ALA B 238 73.803 79.825 0.662 1.00 88.84 ATOM 21 CA GLU B 239 72.612 76.288 -0.084 1.00100.62 ATOM 22 CA ILE B 240 69.585 74.279 0.930 1.00101.41 ATOM 23 CA ARG B 241 68.907 70.660 0.084 1.00113.96 ATOM 24 CA SER B 242 65.166 70.302 -0.416 1.00123.69 ATOM 25 CA ALA B 243 63.612 66.822 -0.151 1.00143.96 ATOM 26 CA LEU B 244 60.007 65.938 0.704 1.00162.71 ATOM 27 CA GLU B 245 59.965 63.808 3.854 1.00177.74 ATOM 28 CA LYS B 246 57.490 61.398 2.228 1.00184.77 ATOM 29 CA GLY B 247 56.631 61.027 -1.464 1.00186.48 ATOM 30 CA SER B 248 58.792 60.563 -4.580 1.00186.74 ATOM 31 CA ARG B 249 61.546 62.330 -2.618 1.00185.46 ATOM 32 CA PHE B 250 62.705 65.065 -5.029 1.00184.98 ATOM 33 CA ILE B 251 66.227 66.393 -4.541 1.00175.60 ATOM 34 CA SER B 252 66.410 69.779 -6.211 1.00164.22 ATOM 35 CA THR B 253 68.908 72.225 -4.734 1.00148.08 ATOM 36 CA LEU B 254 68.290 75.926 -4.149 1.00134.02 ATOM 37 CA GLN B 255 71.194 78.238 -4.878 1.00126.50 ATOM 38 CA VAL B 256 71.386 81.843 -3.661 1.00121.61 ATOM 39 CA LYS B 257 74.626 83.235 -5.073 1.00116.90 ATOM 40 CA LEU B 258 76.375 86.593 -4.747 1.00118.88 ATOM 41 CA TYR B 259 78.248 87.853 -7.785 1.00134.08 ATOM 42 CA GLY B 260 81.021 90.442 -7.568 1.00147.56 ATOM 43 CA ARG B 261 83.854 89.546 -5.181 1.00159.27 ATOM 44 CA GLU B 262 84.930 91.843 -2.348 1.00166.98 ATOM 45 CA GLY B 263 85.466 95.295 -3.840 1.00169.93 ATOM 46 CA SER B 264 84.334 95.235 -7.498 1.00171.61 ATOM 47 CA SER B 265 81.325 97.461 -8.328 1.00168.05 ATOM 48 CA ALA B 266 77.832 95.907 -8.547 1.00152.86 ATOM 49 CA ARG B 267 77.760 93.062 -6.024 1.00136.38 ATOM 50 CA THR B 268 74.526 91.494 -7.363 1.00118.24 ATOM 51 CA ILE B 269 72.549 88.760 -5.587 1.00 97.98 ATOM 52 CA LYS B 270 71.269 86.097 -7.963 1.00101.37 ATOM 53 CA ALA B 271 69.851 82.612 -7.400 1.00103.73 ATOM 54 CA THR B 272 69.275 79.397 -9.378 1.00108.05 ATOM 55 CA LEU B 273 66.035 77.458 -9.658 1.00108.19 ATOM 56 CA PRO B 274 65.514 73.871 -10.881 1.00114.46 ATOM 57 CA TYR B 275 64.541 73.532 -14.534 1.00129.05 ATOM 58 CA ILE B 276 65.883 77.021 -15.132 1.00133.98 ATOM 59 CA LYS B 277 68.908 77.357 -17.412 1.00138.13 ATOM 60 CA GLN B 278 70.004 80.834 -16.275 1.00135.57 ATOM 61 CA ASP B 279 70.237 82.449 -12.850 1.00127.52 ATOM 62 CA ILE B 280 67.856 85.025 -11.449 1.00111.03 ATOM 63 CA PRO B 281 68.060 88.169 -9.329 1.00 98.65 ATOM 64 CA ILE B 282 66.439 87.478 -5.977 1.00 90.30 ATOM 65 CA VAL B 283 64.379 90.538 -6.859 1.00 92.15 ATOM 66 CA ILE B 284 62.595 89.196 -9.940 1.00 87.07 ATOM 67 CA ILE B 285 61.817 86.078 -7.963 1.00 84.45 ATOM 68 CA PHE B 286 60.526 88.157 -5.076 1.00 83.67 ATOM 69 CA ARG B 287 58.167 90.123 -7.344 1.00 88.93 ATOM 70 CA ALA B 288 57.419 86.857 -9.029 1.00 95.93 ATOM 71 CA LEU B 289 56.252 85.712 -5.591 1.00103.97 ATOM 72 CA GLY B 290 53.736 88.557 -5.340 1.00104.28 ATOM 73 CA ILE B 291 56.004 91.061 -3.623 1.00 99.09 ATOM 74 CA ILE B 292 56.179 93.941 -6.125 1.00 93.93 ATOM 75 CA PRO B 293 57.222 96.943 -4.039 1.00 86.68 ATOM 76 CA ASP B 294 60.900 97.056 -3.183 1.00 75.97 ATOM 77 CA GLY B 295 61.489 98.193 0.375 1.00 89.51 ATOM 78 CA GLU B 296 58.711 95.761 1.211 1.00 93.34 ATOM 79 CA ILE B 297 61.031 93.194 -0.319 1.00 73.29 ATOM 80 CA LEU B 298 63.742 94.735 1.814 1.00 75.35 ATOM 81 CA GLU B 299 61.430 94.040 4.748 1.00 96.50 ATOM 82 CA HIS B 300 61.685 90.340 3.878 1.00 98.54 ATOM 83 CA ILE B 301 65.452 90.704 3.859 1.00100.24 ATOM 84 CA CYS B 302 66.286 93.248 6.563 1.00110.59 ATOM 85 CA TYR B 303 64.720 92.816 10.014 1.00128.47 ATOM 86 CA ASP B 304 66.249 96.035 11.440 1.00138.93 ATOM 87 CA VAL B 305 66.337 99.376 9.582 1.00136.79 ATOM 88 CA ASN B 306 69.258 100.513 11.761 1.00145.67 ATOM 89 CA ASP B 307 71.505 98.115 9.796 1.00150.77 ATOM 90 CA TRP B 308 72.499 100.439 6.914 1.00152.12 ATOM 91 CA GLN B 309 75.419 98.130 5.996 1.00146.34 ATOM 92 CA MET B 310 73.270 95.217 4.897 1.00139.75 ATOM 93 CA LEU B 311 70.707 97.654 3.482 1.00135.02 ATOM 94 CA GLU B 312 73.336 99.392 1.380 1.00130.73 ATOM 95 CA MET B 313 74.400 95.933 0.164 1.00120.09 ATOM 96 CA LEU B 314 71.044 95.410 -1.530 1.00107.81 ATOM 97 CA LYS B 315 70.837 98.778 -3.215 1.00114.11 ATOM 98 CA PRO B 316 73.004 97.531 -6.114 1.00112.20 ATOM 99 CA CYS B 317 70.683 94.544 -6.256 1.00109.85 ATOM 100 CA VAL B 318 67.308 96.210 -6.526 1.00107.29 ATOM 101 CA GLU B 319 68.823 98.334 -9.270 1.00120.65 ATOM 102 CA ASP B 320 69.159 95.091 -11.164 1.00129.92 ATOM 103 CA GLY B 321 65.501 94.093 -11.158 1.00133.15 ATOM 104 CA PHE B 322 64.305 97.617 -11.926 1.00138.34 ATOM 105 CA VAL B 323 63.402 96.394 -15.435 1.00134.88 ATOM 106 CA ILE B 324 60.374 94.649 -13.934 1.00135.00 ATOM 107 CA GLN B 325 57.571 96.084 -11.818 1.00145.29 ATOM 108 CA ASP B 326 54.625 93.687 -11.439 1.00149.91 ATOM 109 CA ARG B 327 53.902 90.005 -10.785 1.00149.42 ATOM 110 CA GLU B 328 53.067 89.584 -14.500 1.00151.32 ATOM 111 CA THR B 329 56.473 90.366 -16.013 1.00150.36 ATOM 112 CA ALA B 330 58.133 88.753 -12.973 1.00147.80 ATOM 113 CA LEU B 331 56.948 85.267 -13.940 1.00143.09 ATOM 114 CA ASP B 332 57.487 86.153 -17.567 1.00141.73 ATOM 115 CA PHE B 333 61.284 86.489 -17.387 1.00131.50 ATOM 116 CA ILE B 334 61.392 82.804 -16.462 1.00118.34 ATOM 117 CA GLY B 335 61.393 81.033 -19.829 1.00114.02 ATOM 118 CA LYS B 345 54.260 84.462 -24.423 1.00184.10 ATOM 119 CA GLU B 346 51.321 82.938 -22.491 1.00181.87 ATOM 120 CA LYS B 347 52.980 79.526 -22.625 1.00178.69 ATOM 121 CA ARG B 348 56.073 80.356 -20.546 1.00181.42 ATOM 122 CA ILE B 349 54.059 82.433 -18.030 1.00180.63 ATOM 123 CA GLN B 350 52.612 79.130 -16.831 1.00170.68 ATOM 124 CA TYR B 351 55.708 76.931 -16.748 1.00160.57 ATOM 125 CA ALA B 352 57.069 79.294 -14.087 1.00150.03 ATOM 126 CA LYS B 353 54.038 79.203 -11.769 1.00144.88 ATOM 127 CA ASP B 354 54.439 75.456 -11.359 1.00136.25 ATOM 128 CA ILE B 355 58.188 75.491 -10.912 1.00128.16 ATOM 129 CA LEU B 356 57.773 78.027 -8.111 1.00131.90 ATOM 130 CA GLN B 357 55.222 75.729 -6.515 1.00138.56 ATOM 131 CA LYS B 358 56.505 72.200 -7.076 1.00135.60 ATOM 132 CA GLU B 359 60.214 72.901 -7.513 1.00132.08 ATOM 133 CA PHE B 360 60.938 76.132 -5.629 1.00118.02 ATOM 134 CA LEU B 361 61.991 75.551 -2.042 1.00107.72 ATOM 135 CA PRO B 362 59.803 72.433 -2.501 1.00103.28 ATOM 136 CA HIS B 363 60.135 71.556 1.126 1.00 98.31 ATOM 137 CA ILE B 364 57.723 73.442 3.389 1.00107.32 ATOM 138 CA THR B 365 54.994 72.890 0.747 1.00109.18 ATOM 139 CA GLN B 366 54.332 72.589 -2.988 1.00120.29 ATOM 140 CA LEU B 367 50.592 73.282 -2.649 1.00128.95 ATOM 141 CA GLU B 368 49.711 76.857 -3.615 1.00137.22 ATOM 142 CA GLY B 369 48.569 79.546 -1.174 1.00138.02 ATOM 143 CA PHE B 370 51.893 80.073 0.594 1.00131.93 ATOM 144 CA GLU B 371 53.802 82.617 -1.509 1.00117.48 ATOM 145 CA SER B 372 54.408 84.489 1.713 1.00111.40 ATOM 146 CA ARG B 373 55.965 81.641 3.687 1.00106.10 ATOM 147 CA LYS B 374 58.300 80.896 0.795 1.00 90.66 ATOM 148 CA ALA B 375 59.394 84.471 0.230 1.00 77.63 ATOM 149 CA PHE B 376 60.231 84.924 3.911 1.00 74.97 ATOM 150 CA PHE B 377 62.580 82.003 3.567 1.00 66.97 ATOM 151 CA LEU B 378 64.232 83.128 0.341 1.00 46.32 ATOM 152 CA GLY B 379 64.772 86.127 2.549 1.00 46.92 ATOM 153 CA TYR B 380 66.049 84.159 5.570 1.00 57.95 ATOM 154 CA MET B 381 68.605 82.880 3.112 1.00 55.54 ATOM 155 CA ILE B 382 69.747 86.137 1.574 1.00 50.65 ATOM 156 CA ASN B 383 69.941 87.517 5.097 1.00 64.83 ATOM 157 CA ARG B 384 72.206 84.705 6.311 1.00 72.82 ATOM 158 CA LEU B 385 73.996 85.031 2.997 1.00 64.28 ATOM 159 CA LEU B 386 75.220 88.554 3.611 1.00 70.39 ATOM 160 CA LEU B 387 75.773 88.191 7.359 1.00 86.55 ATOM 161 CA CYS B 388 78.941 86.402 6.247 1.00102.78 ATOM 162 CA ALA B 389 79.955 88.793 3.454 1.00102.98 ATOM 163 CA LEU B 390 79.911 91.287 6.336 1.00105.33 ATOM 164 CA ASP B 391 82.161 89.250 8.621 1.00113.27 ATOM 165 CA ARG B 392 79.494 88.773 11.292 1.00119.78 ATOM 166 CA LYS B 393 79.106 85.004 11.012 1.00123.52 ATOM 167 CA ASP B 394 81.833 82.587 9.948 1.00119.36 ATOM 168 CA GLN B 395 81.154 80.274 7.030 1.00114.59 ATOM 169 CA ASP B 396 79.205 77.079 7.753 1.00112.87 ATOM 170 CA ASP B 397 81.212 74.120 9.103 1.00105.73 ATOM 171 CA ARG B 398 80.260 71.284 6.754 1.00 96.26 ATOM 172 CA ASP B 399 81.539 68.832 9.365 1.00 89.41 ATOM 173 CA HIS B 400 79.244 69.497 12.275 1.00 84.04 ATOM 174 CA PHE B 401 77.749 66.184 13.271 1.00 83.33 ATOM 175 CA GLY B 402 74.361 67.698 14.074 1.00 82.79 ATOM 176 CA LYS B 403 74.041 68.187 10.302 1.00 76.33 ATOM 177 CA LYS B 404 74.985 64.631 9.367 1.00 71.02 TER