HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 5; COMPND 2 MOLECULE: DNA-directed RNA polymerase II 45 kDa polypeptide; COMPND 3 CHAIN: C; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS DBREF 1Y1Y C 1 318 UNP P16370 RPB3_YEAST 1 318 SEQRES 1 C 135 ILE ALA GLU ILE PRO THR LEU ALA ILE ASP SER VAL GLU SEQRES 2 C 135 VAL GLU THR ASN THR THR VAL LEU ALA ASP GLU PHE ILE SEQRES 3 C 135 ALA HIS ARG LEU GLY LEU ILE PRO LEU GLN SER MET ASP SEQRES 4 C 135 ILE GLU GLN LEU GLU TYR SER ARG ASP CYS PHE CYS GLU SEQRES 5 C 135 ASP HIS CYS ASP LYS CYS SER VAL VAL LEU THR LEU GLN SEQRES 6 C 135 ALA PHE GLY GLU SER GLU SER THR THR ASN VAL TYR SER SEQRES 7 C 135 LYS ASP LEU VAL ILE VAL SER ASN LEU MET GLY ARG ASN SEQRES 8 C 135 ILE GLY HIS PRO ILE ILE GLN ASP LYS GLU GLY ASN GLY SEQRES 9 C 135 VAL LEU ILE CYS LYS LEU ARG LYS GLY GLN GLU LEU LYS SEQRES 10 C 135 LEU THR CYS VAL ALA LYS LYS GLY ILE ALA LYS GLU HIS SEQRES 11 C 135 ALA LYS TRP GLY PRO ATOM 1 CA ILE C 38 112.219 18.230 34.347 1.00 53.13 ATOM 2 CA ALA C 39 112.424 16.792 30.883 1.00 58.31 ATOM 3 CA GLU C 40 114.337 13.468 30.776 1.00 60.74 ATOM 4 CA ILE C 41 112.828 11.147 33.405 1.00 50.95 ATOM 5 CA PRO C 42 110.837 8.491 31.502 1.00 44.42 ATOM 6 CA THR C 43 107.189 8.224 32.283 1.00 44.51 ATOM 7 CA LEU C 44 104.139 6.705 30.739 1.00 39.50 ATOM 8 CA ALA C 45 101.063 8.312 29.293 1.00 37.72 ATOM 9 CA ILE C 46 98.444 7.674 26.648 1.00 40.28 ATOM 10 CA ASP C 47 100.048 8.103 23.228 1.00 47.97 ATOM 11 CA SER C 48 97.369 7.131 20.775 1.00 47.44 ATOM 12 CA VAL C 49 93.592 7.099 20.619 1.00 47.19 ATOM 13 CA GLU C 50 91.435 4.834 18.525 1.00 67.01 ATOM 14 CA VAL C 51 88.045 6.519 18.366 1.00 61.63 ATOM 15 CA GLU C 52 85.096 4.173 17.948 1.00 69.72 ATOM 16 CA THR C 53 82.269 6.487 18.910 1.00 71.62 ATOM 17 CA ASN C 54 81.933 10.071 20.142 1.00 65.94 ATOM 18 CA THR C 55 78.761 12.193 20.366 1.00 63.83 ATOM 19 CA THR C 56 80.229 14.732 22.766 1.00 61.87 ATOM 20 CA VAL C 57 80.599 18.405 22.169 1.00 64.05 ATOM 21 CA LEU C 58 84.368 18.209 22.468 1.00 66.84 ATOM 22 CA ALA C 59 85.830 17.010 19.177 1.00 60.24 ATOM 23 CA ASP C 60 87.959 13.838 18.889 1.00 53.58 ATOM 24 CA GLU C 61 91.557 15.076 18.991 1.00 51.25 ATOM 25 CA PHE C 62 90.457 17.543 21.627 1.00 51.16 ATOM 26 CA ILE C 63 89.648 14.659 23.979 1.00 39.00 ATOM 27 CA ALA C 64 92.543 12.692 22.546 1.00 38.49 ATOM 28 CA HIS C 65 94.838 15.478 23.676 1.00 45.20 ATOM 29 CA ARG C 66 93.292 15.681 27.163 1.00 47.09 ATOM 30 CA LEU C 67 93.846 11.954 27.657 1.00 38.59 ATOM 31 CA GLY C 68 97.513 12.290 26.898 1.00 49.13 ATOM 32 CA LEU C 69 97.907 14.680 29.807 1.00 51.33 ATOM 33 CA ILE C 70 96.064 12.361 32.200 1.00 50.32 ATOM 34 CA PRO C 71 98.815 11.303 34.536 1.00 55.36 ATOM 35 CA LEU C 72 99.297 7.538 34.560 1.00 59.02 ATOM 36 CA GLN C 73 101.090 5.281 37.023 1.00 61.36 ATOM 37 CA SER C 74 104.640 4.413 36.199 1.00 68.72 ATOM 38 CA MET C 75 106.762 3.506 39.176 1.00 81.37 ATOM 39 CA ASP C 76 107.666 0.297 37.395 1.00 86.22 ATOM 40 CA ILE C 77 108.367 2.101 34.113 1.00 89.25 ATOM 41 CA GLU C 78 112.066 1.134 34.077 1.00100.37 ATOM 42 CA GLN C 79 110.986 -2.419 33.110 1.00102.57 ATOM 43 CA LEU C 80 108.656 -1.697 30.154 1.00 93.58 ATOM 44 CA GLU C 81 110.659 -1.180 26.953 1.00 95.30 ATOM 45 CA TYR C 82 110.290 1.877 24.671 1.00 83.54 ATOM 46 CA SER C 83 107.911 0.975 21.855 1.00 83.18 ATOM 47 CA ARG C 84 110.684 1.803 19.385 1.00 85.19 ATOM 48 CA ASP C 85 112.901 -1.102 20.526 1.00 76.44 ATOM 49 CA CYS C 86 110.277 -3.772 21.448 1.00 66.81 ATOM 50 CA PHE C 87 110.591 -5.623 18.130 1.00 51.21 ATOM 51 CA CYS C 88 106.854 -6.217 18.096 1.00 57.73 ATOM 52 CA GLU C 89 105.527 -4.573 14.981 1.00 70.23 ATOM 53 CA ASP C 90 103.733 -1.632 16.664 1.00 79.81 ATOM 54 CA HIS C 91 103.375 -2.401 20.501 1.00 73.36 ATOM 55 CA CYS C 92 102.712 -5.242 22.951 1.00 73.26 ATOM 56 CA ASP C 93 102.160 -5.920 26.646 1.00 78.65 ATOM 57 CA LYS C 94 105.972 -5.802 26.574 1.00 69.48 ATOM 58 CA CYS C 95 106.142 -2.083 25.732 1.00 56.72 ATOM 59 CA SER C 96 102.672 -0.601 26.267 1.00 45.99 ATOM 60 CA VAL C 97 99.542 -0.694 28.386 1.00 47.28 ATOM 61 CA VAL C 98 96.165 -0.266 26.719 1.00 43.58 ATOM 62 CA LEU C 99 93.152 1.492 28.179 1.00 48.41 ATOM 63 CA THR C 100 89.472 1.878 27.400 1.00 68.96 ATOM 64 CA LEU C 101 86.714 4.357 27.994 1.00 78.80 ATOM 65 CA GLN C 102 82.991 3.948 27.573 1.00 87.53 ATOM 66 CA ALA C 103 80.291 6.344 28.701 1.00 85.15 ATOM 67 CA PHE C 104 76.594 6.846 28.156 1.00 93.30 ATOM 68 CA GLY C 105 74.021 9.473 28.939 1.00108.26 ATOM 69 CA GLU C 106 71.904 7.453 31.296 1.00119.32 ATOM 70 CA SER C 107 71.314 10.108 33.954 1.00117.91 ATOM 71 CA GLU C 108 68.743 12.649 32.822 1.00113.18 ATOM 72 CA SER C 109 71.234 15.070 34.355 1.00107.59 ATOM 73 CA THR C 110 74.774 15.613 32.999 1.00 97.85 ATOM 74 CA THR C 111 77.162 12.624 33.169 1.00 86.05 ATOM 75 CA ASN C 112 80.768 13.315 34.219 1.00 76.22 ATOM 76 CA VAL C 113 83.442 11.171 32.552 1.00 65.00 ATOM 77 CA TYR C 114 86.523 11.133 34.787 1.00 66.52 ATOM 78 CA SER C 115 89.864 9.372 34.360 1.00 66.47 ATOM 79 CA LYS C 116 88.847 6.796 36.965 1.00 77.46 ATOM 80 CA ASP C 117 86.523 5.560 34.246 1.00 73.05 ATOM 81 CA LEU C 118 89.594 4.239 32.445 1.00 68.96 ATOM 82 CA VAL C 119 89.946 0.466 32.073 1.00 73.02 ATOM 83 CA ILE C 120 93.284 -1.338 31.597 1.00 67.10 ATOM 84 CA VAL C 121 92.836 -4.127 29.060 1.00 70.91 ATOM 85 CA SER C 122 96.300 -5.570 28.424 1.00 81.89 ATOM 86 CA ASN C 123 98.500 -7.655 30.710 1.00 92.93 ATOM 87 CA LEU C 124 100.113 -5.580 33.469 1.00100.58 ATOM 88 CA MET C 125 102.489 -8.467 34.146 1.00101.47 ATOM 89 CA GLY C 126 102.118 -7.507 37.789 1.00102.33 ATOM 90 CA ARG C 127 103.884 -4.128 37.983 1.00 94.69 ATOM 91 CA ASN C 128 102.628 -0.715 39.129 1.00 94.83 ATOM 92 CA ILE C 129 101.946 0.888 35.752 1.00 81.90 ATOM 93 CA GLY C 130 99.212 2.365 33.611 1.00 82.22 ATOM 94 CA HIS C 131 96.939 3.252 36.536 1.00 85.27 ATOM 95 CA PRO C 132 95.274 6.671 36.127 1.00 83.09 ATOM 96 CA ILE C 133 96.739 8.390 39.153 1.00 79.95 ATOM 97 CA ILE C 134 94.257 9.877 41.572 1.00 84.01 ATOM 98 CA GLN C 135 94.629 12.341 44.448 1.00 97.46 ATOM 99 CA ASP C 136 91.070 13.620 44.365 1.00102.09 ATOM 100 CA LYS C 137 89.258 13.853 47.724 1.00106.08 ATOM 101 CA GLU C 138 86.117 12.113 46.419 1.00105.75 ATOM 102 CA GLY C 139 88.184 9.783 44.279 1.00 99.06 ATOM 103 CA ASN C 140 87.452 10.376 40.600 1.00 92.61 ATOM 104 CA GLY C 141 90.399 12.508 39.487 1.00 84.54 ATOM 105 CA VAL C 142 90.623 14.341 36.124 1.00 70.19 ATOM 106 CA LEU C 143 87.234 15.178 34.617 1.00 56.59 ATOM 107 CA ILE C 144 87.870 14.159 31.025 1.00 50.72 ATOM 108 CA CYS C 145 84.530 15.192 29.557 1.00 55.18 ATOM 109 CA LYS C 146 80.798 15.655 30.144 1.00 57.88 ATOM 110 CA LEU C 147 77.677 14.710 28.171 1.00 67.99 ATOM 111 CA ARG C 148 73.875 14.934 27.906 1.00 86.19 ATOM 112 CA LYS C 149 70.980 12.650 26.796 1.00 91.34 ATOM 113 CA GLY C 150 72.221 9.932 24.467 1.00 85.43 ATOM 114 CA GLN C 151 75.740 11.238 24.145 1.00 80.23 ATOM 115 CA GLU C 152 78.098 8.306 23.678 1.00 80.69 ATOM 116 CA LEU C 153 81.879 7.905 23.958 1.00 74.85 ATOM 117 CA LYS C 154 83.916 4.764 23.068 1.00 77.15 ATOM 118 CA LEU C 155 87.717 5.062 23.074 1.00 69.76 ATOM 119 CA THR C 156 90.902 3.020 22.970 1.00 58.58 ATOM 120 CA CYS C 157 94.055 4.429 24.549 1.00 53.54 ATOM 121 CA VAL C 158 97.593 3.099 24.083 1.00 44.22 ATOM 122 CA ALA C 159 100.058 4.312 26.771 1.00 49.15 ATOM 123 CA LYS C 160 103.784 4.290 25.940 1.00 51.91 ATOM 124 CA LYS C 161 107.128 5.450 27.324 1.00 59.63 ATOM 125 CA GLY C 162 108.392 8.892 26.177 1.00 64.83 ATOM 126 CA ILE C 163 109.738 11.951 28.077 1.00 59.03 ATOM 127 CA ALA C 164 109.045 15.656 28.385 1.00 60.18 ATOM 128 CA LYS C 165 111.679 16.332 25.726 1.00 55.93 ATOM 129 CA GLU C 166 109.485 14.402 23.311 1.00 49.02 ATOM 130 CA HIS C 167 106.393 15.991 24.847 1.00 45.91 ATOM 131 CA ALA C 168 105.474 17.435 28.225 1.00 62.90 ATOM 132 CA LYS C 169 102.497 15.141 28.807 1.00 63.10 ATOM 133 CA TRP C 170 105.293 12.836 30.027 1.00 70.69 ATOM 134 CA GLY C 171 107.474 14.799 32.459 1.00 79.58 ATOM 135 CA PRO C 172 106.646 13.988 36.097 1.00 72.98 TER