HEADER TRANSFERASE/TRANSCRIPTION/DNA-RNA HYBRID19-NOV-04 1Y1Y TITLE RNA Polymerase II-TFIIS-DNA/RNA complex COMPND MOL_ID: 6; COMPND 2 MOLECULE: DNA-directed RNA polymerase II 32 kDa polypeptide; COMPND 3 CHAIN: D; COMPND 4 EC: 2.7.7.6; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.00 ANGSTORMS DBREF 1Y1Y D 1 221 UNP P20433 RPB4_YEAST 1 221 SEQRES 1 D 159 SER THR SER THR PHE GLN THR ARG ARG ARG ARG LEU LYS SEQRES 2 D 159 LYS VAL GLU GLU GLU GLU ASN ALA ALA THR LEU GLN LEU SEQRES 3 D 159 GLY GLN GLU PHE GLN LEU LYS GLN ILE ASN HIS GLN GLY SEQRES 4 D 159 GLU GLU GLU GLU LEU ILE ALA LEU ASN LEU SER GLU ALA SEQRES 5 D 159 ARG LEU VAL ILE LYS GLU ALA LEU VAL GLU ARG ARG ARG SEQRES 6 D 159 ALA PHE LYS GLU GLN THR THR GLY GLY ASN ASN LYS ASP SEQRES 7 D 159 LEU LYS ASN THR MET GLN TYR LEU THR ASN PHE SER ARG SEQRES 8 D 159 PHE ARG ASP GLN GLU THR VAL GLY ALA VAL ILE GLN LEU SEQRES 9 D 159 LEU LYS SER THR GLY LEU HIS PRO PHE GLU VAL ALA GLN SEQRES 10 D 159 LEU GLY SER LEU ALA CYS ASP THR ALA ASP GLU ALA LYS SEQRES 11 D 159 THR LEU ILE PRO SER LEU ASN ASN LYS ILE SER ASP ASP SEQRES 12 D 159 GLU LEU GLU ARG ILE LEU LYS GLU LEU SER ASN LEU GLU SEQRES 13 D 159 THR LEU TYR ATOM 1 CA SER D 4 122.493 30.332 -45.573 1.00120.33 ATOM 2 CA THR D 5 125.840 31.735 -46.700 1.00119.59 ATOM 3 CA SER D 6 125.738 35.596 -46.925 1.00128.02 ATOM 4 CA THR D 7 127.184 37.370 -50.019 1.00136.96 ATOM 5 CA PHE D 8 129.448 40.397 -49.299 1.00142.42 ATOM 6 CA GLN D 9 126.689 43.031 -49.831 1.00153.12 ATOM 7 CA THR D 10 123.737 44.071 -47.622 1.00160.23 ATOM 8 CA ARG D 11 121.137 45.368 -50.100 1.00164.23 ATOM 9 CA ARG D 12 118.831 47.386 -47.802 1.00164.50 ATOM 10 CA ARG D 13 115.527 45.657 -48.656 1.00158.89 ATOM 11 CA ARG D 14 112.718 48.092 -47.855 1.00152.58 ATOM 12 CA LEU D 15 109.653 45.801 -47.458 1.00146.06 ATOM 13 CA LYS D 16 108.489 45.955 -51.064 1.00152.71 ATOM 14 CA LYS D 17 110.728 43.231 -52.516 1.00158.80 ATOM 15 CA VAL D 18 109.534 43.284 -56.132 1.00165.80 ATOM 16 CA GLU D 19 111.754 43.814 -59.163 1.00165.24 ATOM 17 CA GLU D 20 113.774 40.576 -59.434 1.00156.51 ATOM 18 CA GLU D 21 114.491 41.048 -63.153 1.00144.28 ATOM 19 CA GLU D 22 114.875 38.207 -65.639 1.00127.79 ATOM 20 CA ASN D 23 118.120 36.236 -66.084 1.00106.81 ATOM 21 CA ALA D 24 119.544 35.686 -69.591 1.00 83.03 ATOM 22 CA ALA D 25 122.323 36.156 -72.123 1.00 73.07 ATOM 23 CA THR D 26 121.512 39.867 -71.979 1.00 75.90 ATOM 24 CA LEU D 27 124.366 39.579 -69.554 1.00 73.38 ATOM 25 CA GLN D 28 121.742 40.294 -66.907 1.00 83.87 ATOM 26 CA LEU D 29 122.633 37.929 -64.072 1.00 80.62 ATOM 27 CA GLY D 30 121.142 38.029 -60.586 1.00 94.46 ATOM 28 CA GLN D 31 122.107 40.911 -58.285 1.00107.18 ATOM 29 CA GLU D 32 124.746 38.641 -56.755 1.00100.10 ATOM 30 CA PHE D 33 126.659 38.659 -60.044 1.00 92.60 ATOM 31 CA GLN D 34 127.165 42.225 -61.323 1.00 98.78 ATOM 32 CA LEU D 35 130.615 42.946 -62.760 1.00 97.01 ATOM 33 CA LYS D 36 131.115 45.232 -59.796 1.00102.55 ATOM 34 CA GLN D 37 131.162 43.047 -56.717 1.00 97.57 ATOM 35 CA ILE D 38 132.902 43.425 -53.399 1.00 96.89 ATOM 36 CA ASN D 39 135.933 41.550 -52.085 1.00104.87 ATOM 37 CA HIS D 40 136.209 40.549 -48.408 1.00117.57 ATOM 38 CA GLN D 41 139.059 42.993 -47.841 1.00120.61 ATOM 39 CA GLY D 42 136.455 45.594 -48.743 1.00121.31 ATOM 40 CA GLU D 43 137.663 46.531 -52.245 1.00120.05 ATOM 41 CA GLU D 44 136.052 46.344 -55.693 1.00113.85 ATOM 42 CA GLU D 45 136.816 43.430 -57.992 1.00106.24 ATOM 43 CA GLU D 46 135.654 42.238 -61.406 1.00 95.88 ATOM 44 CA LEU D 47 133.455 39.154 -61.469 1.00 80.50 ATOM 45 CA ILE D 48 135.234 35.806 -61.570 1.00 74.75 ATOM 46 CA ALA D 49 134.337 33.937 -64.755 1.00 64.82 ATOM 47 CA LEU D 50 135.824 30.444 -64.938 1.00 53.72 ATOM 48 CA ASN D 51 135.954 28.477 -68.167 1.00 60.59 ATOM 49 CA LEU D 52 135.930 24.701 -67.982 1.00 61.10 ATOM 50 CA SER D 53 139.425 23.255 -67.722 1.00 73.11 ATOM 51 CA GLU D 54 140.175 26.527 -66.022 1.00 72.79 ATOM 52 CA ALA D 55 137.844 25.607 -63.258 1.00 70.04 ATOM 53 CA ARG D 56 139.221 22.103 -63.379 1.00 68.34 ATOM 54 CA LEU D 57 142.645 23.446 -62.525 1.00 62.35 ATOM 55 CA VAL D 58 141.453 25.822 -59.865 1.00 60.58 ATOM 56 CA ILE D 59 139.428 23.195 -58.008 1.00 59.97 ATOM 57 CA LYS D 60 142.290 20.727 -58.340 1.00 74.88 ATOM 58 CA GLU D 61 144.776 23.283 -57.059 1.00 84.87 ATOM 59 CA ALA D 62 142.765 23.742 -53.875 1.00 85.45 ATOM 60 CA LEU D 63 141.863 20.071 -53.452 1.00 83.68 ATOM 61 CA VAL D 64 145.567 19.296 -53.697 1.00 89.67 ATOM 62 CA GLU D 65 146.980 21.955 -51.370 1.00 98.61 ATOM 63 CA ARG D 66 144.209 20.985 -48.999 1.00 97.86 ATOM 64 CA ARG D 67 145.627 17.457 -48.795 1.00112.09 ATOM 65 CA ARG D 68 148.982 18.877 -47.772 1.00123.69 ATOM 66 CA ALA D 69 147.605 21.078 -45.008 1.00128.77 ATOM 67 CA PHE D 70 145.428 18.097 -44.143 1.00136.63 ATOM 68 CA LYS D 71 148.571 16.221 -43.091 1.00147.40 ATOM 69 CA GLU D 131 138.281 10.076 -51.500 1.00112.20 ATOM 70 CA GLN D 132 140.970 11.963 -49.566 1.00112.26 ATOM 71 CA THR D 133 139.884 15.573 -48.983 1.00118.86 ATOM 72 CA THR D 134 136.194 15.488 -49.891 1.00124.41 ATOM 73 CA GLY D 135 133.195 14.880 -47.653 1.00133.45 ATOM 74 CA GLY D 136 132.321 11.705 -49.569 1.00140.31 ATOM 75 CA ASN D 137 128.653 12.683 -49.962 1.00138.67 ATOM 76 CA ASN D 138 129.585 15.508 -52.290 1.00126.95 ATOM 77 CA LYS D 139 128.165 13.556 -55.189 1.00114.18 ATOM 78 CA ASP D 140 127.951 16.987 -56.843 1.00 97.57 ATOM 79 CA LEU D 141 131.669 17.673 -56.778 1.00 83.25 ATOM 80 CA LYS D 142 132.356 14.208 -58.194 1.00 86.50 ATOM 81 CA ASN D 143 130.073 14.542 -61.205 1.00 81.14 ATOM 82 CA THR D 144 131.524 18.034 -61.650 1.00 65.88 ATOM 83 CA MET D 145 135.073 16.762 -61.798 1.00 62.70 ATOM 84 CA GLN D 146 134.260 14.223 -64.491 1.00 63.65 ATOM 85 CA TYR D 147 132.381 16.745 -66.641 1.00 57.77 ATOM 86 CA LEU D 148 135.090 19.262 -65.849 1.00 51.48 ATOM 87 CA THR D 149 137.748 16.673 -66.592 1.00 54.79 ATOM 88 CA ASN D 150 136.080 15.273 -69.656 1.00 60.24 ATOM 89 CA PHE D 151 134.984 18.438 -71.437 1.00 63.74 ATOM 90 CA SER D 152 137.951 20.591 -70.466 1.00 74.06 ATOM 91 CA ARG D 153 140.182 21.984 -73.213 1.00 83.85 ATOM 92 CA PHE D 154 143.500 22.699 -71.456 1.00 89.30 ATOM 93 CA ARG D 155 145.840 20.624 -69.270 1.00105.43 ATOM 94 CA ASP D 156 148.726 23.053 -68.665 1.00106.37 ATOM 95 CA GLN D 157 148.362 25.999 -66.300 1.00106.45 ATOM 96 CA GLU D 158 150.488 27.514 -69.078 1.00102.64 ATOM 97 CA THR D 159 148.202 27.017 -72.093 1.00 87.14 ATOM 98 CA VAL D 160 145.255 28.117 -69.936 1.00 74.30 ATOM 99 CA GLY D 161 147.405 31.097 -69.094 1.00 81.63 ATOM 100 CA ALA D 162 147.761 32.162 -72.732 1.00 84.34 ATOM 101 CA VAL D 163 144.020 31.576 -73.192 1.00 81.07 ATOM 102 CA ILE D 164 143.410 34.158 -70.517 1.00 91.11 ATOM 103 CA GLN D 165 146.156 36.624 -71.459 1.00102.94 ATOM 104 CA LEU D 166 144.654 36.369 -74.940 1.00 94.56 ATOM 105 CA LEU D 167 140.970 36.865 -74.226 1.00 92.55 ATOM 106 CA LYS D 168 141.410 39.506 -71.529 1.00101.00 ATOM 107 CA SER D 169 142.421 42.000 -74.217 1.00 98.50 ATOM 108 CA THR D 170 138.899 42.073 -75.610 1.00 92.88 ATOM 109 CA GLY D 171 137.378 44.023 -72.791 1.00 93.16 ATOM 110 CA LEU D 172 134.528 41.573 -73.222 1.00 85.79 ATOM 111 CA HIS D 173 132.441 40.888 -70.153 1.00 94.18 ATOM 112 CA PRO D 174 133.658 37.897 -68.037 1.00 80.62 ATOM 113 CA PHE D 175 130.711 35.676 -68.937 1.00 63.41 ATOM 114 CA GLU D 176 131.706 35.924 -72.600 1.00 55.93 ATOM 115 CA VAL D 177 135.372 35.593 -71.825 1.00 54.80 ATOM 116 CA ALA D 178 134.203 32.338 -70.252 1.00 52.99 ATOM 117 CA GLN D 179 131.839 30.878 -72.791 1.00 58.48 ATOM 118 CA LEU D 180 134.383 31.925 -75.376 1.00 58.03 ATOM 119 CA GLY D 181 136.939 30.005 -73.363 1.00 63.28 ATOM 120 CA SER D 182 135.051 26.710 -73.032 1.00 63.56 ATOM 121 CA LEU D 183 133.087 26.343 -76.284 1.00 66.74 ATOM 122 CA ALA D 184 134.380 25.042 -79.593 1.00 72.11 ATOM 123 CA CYS D 185 133.971 27.581 -82.330 1.00 76.19 ATOM 124 CA ASP D 186 134.922 27.774 -85.953 1.00 75.21 ATOM 125 CA THR D 187 132.892 30.619 -87.412 1.00 71.26 ATOM 126 CA ALA D 188 132.055 33.839 -85.674 1.00 64.13 ATOM 127 CA ASP D 189 128.432 33.060 -86.508 1.00 66.10 ATOM 128 CA GLU D 190 128.844 29.879 -84.446 1.00 60.96 ATOM 129 CA ALA D 191 130.218 31.971 -81.575 1.00 50.81 ATOM 130 CA LYS D 192 128.143 35.141 -81.886 1.00 49.01 ATOM 131 CA THR D 193 125.083 32.925 -82.070 1.00 46.47 ATOM 132 CA LEU D 194 125.764 30.796 -79.012 1.00 43.81 ATOM 133 CA ILE D 195 126.842 33.918 -77.181 1.00 41.28 ATOM 134 CA PRO D 196 124.515 36.717 -78.468 1.00 43.20 ATOM 135 CA SER D 197 125.769 39.164 -75.865 1.00 52.42 ATOM 136 CA LEU D 198 128.481 39.623 -78.480 1.00 59.75 ATOM 137 CA ASN D 199 126.844 40.417 -81.805 1.00 84.14 ATOM 138 CA ASN D 200 128.051 44.042 -81.995 1.00 93.23 ATOM 139 CA LYS D 201 130.783 44.064 -79.336 1.00 92.71 ATOM 140 CA ILE D 202 133.486 42.843 -81.749 1.00 87.42 ATOM 141 CA SER D 203 134.095 42.717 -85.490 1.00 88.45 ATOM 142 CA ASP D 204 133.548 39.289 -87.010 1.00 89.90 ATOM 143 CA ASP D 205 137.063 39.217 -88.387 1.00 93.25 ATOM 144 CA GLU D 206 138.849 39.735 -85.070 1.00 91.62 ATOM 145 CA LEU D 207 136.664 37.306 -83.159 1.00 82.74 ATOM 146 CA GLU D 208 137.798 34.910 -85.870 1.00 85.80 ATOM 147 CA ARG D 209 141.496 35.540 -85.231 1.00 80.18 ATOM 148 CA ILE D 210 140.707 34.815 -81.626 1.00 68.82 ATOM 149 CA LEU D 211 139.036 31.548 -82.561 1.00 81.54 ATOM 150 CA LYS D 212 141.912 30.666 -84.849 1.00 95.71 ATOM 151 CA GLU D 213 144.436 30.934 -82.048 1.00 97.19 ATOM 152 CA LEU D 214 142.195 29.013 -79.682 1.00 88.94 ATOM 153 CA SER D 215 142.050 25.856 -81.772 1.00 96.02 ATOM 154 CA ASN D 216 145.830 26.154 -82.060 1.00100.24 ATOM 155 CA LEU D 217 146.343 26.366 -78.290 1.00 94.20 ATOM 156 CA GLU D 218 143.653 23.708 -77.968 1.00102.45 ATOM 157 CA THR D 219 145.748 21.103 -76.192 1.00113.74 ATOM 158 CA LEU D 220 145.739 17.631 -77.747 1.00128.97 ATOM 159 CA TYR D 221 144.697 14.280 -76.309 1.00134.11 TER