HEADER RIBOSOME/ANTIBIOTIC 13-JAN-05 1YIT TITLE Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal TITLE 2 Subunit Of Haloarcula Marismortui COMPND MOL_ID: 13; COMPND 2 MOLECULE: ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG; COMPND 3 CHAIN: G; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.80 ANGSTORMS DBREF 1YIT G 1 348 UNP P15825 RLA0_HALMA 1 348 SEQRES 1 G 29 ILE PRO GLU TRP LYS GLN GLU GLU VAL ASP ALA ILE VAL SEQRES 2 G 29 GLU MET ILE GLU SER ARG ASN THR LEU LEU GLU ARG ALA SEQRES 3 G 29 LEU ASP ASP ATOM 1 N ILE G 12 36.494 68.341 171.650 1.00 77.92 ATOM 2 CA ILE G 12 36.526 67.751 173.017 1.00 77.72 ATOM 3 C ILE G 12 37.888 67.128 173.286 1.00 77.42 ATOM 4 O ILE G 12 38.006 65.923 173.493 1.00 77.02 ATOM 5 CB ILE G 12 35.417 66.685 173.181 1.00 78.20 ATOM 6 CG1 ILE G 12 35.261 65.891 171.876 1.00 77.84 ATOM 7 CG2 ILE G 12 34.111 67.361 173.603 1.00 77.78 ATOM 8 CD1 ILE G 12 34.145 64.857 171.892 1.00 76.83 ATOM 9 N PRO G 13 38.941 67.958 173.293 1.00 77.69 ATOM 10 CA PRO G 13 40.314 67.510 173.531 1.00 78.21 ATOM 11 C PRO G 13 40.394 66.559 174.705 1.00 79.00 ATOM 12 O PRO G 13 39.605 66.658 175.643 1.00 78.45 ATOM 13 CB PRO G 13 41.058 68.813 173.794 1.00 77.64 ATOM 14 CG PRO G 13 40.328 69.780 172.931 1.00 77.65 ATOM 15 CD PRO G 13 38.886 69.427 173.205 1.00 77.54 ATOM 16 N GLU G 14 41.351 65.640 174.647 1.00 80.32 ATOM 17 CA GLU G 14 41.526 64.663 175.711 1.00 81.77 ATOM 18 C GLU G 14 42.033 65.274 177.012 1.00 81.09 ATOM 19 O GLU G 14 41.477 65.014 178.077 1.00 80.94 ATOM 20 CB GLU G 14 42.474 63.551 175.259 1.00 83.79 ATOM 21 CG GLU G 14 41.903 62.659 174.166 1.00 87.38 ATOM 22 CD GLU G 14 42.772 61.442 173.896 1.00 89.31 ATOM 23 OE1 GLU G 14 43.077 60.716 174.867 1.00 91.37 ATOM 24 OE2 GLU G 14 43.144 61.209 172.723 1.00 89.05 ATOM 25 N TRP G 15 43.083 66.086 176.936 1.00 80.43 ATOM 26 CA TRP G 15 43.623 66.695 178.142 1.00 79.97 ATOM 27 C TRP G 15 42.506 67.362 178.930 1.00 79.58 ATOM 28 O TRP G 15 42.562 67.439 180.155 1.00 79.69 ATOM 29 CB TRP G 15 44.699 67.725 177.803 1.00 80.30 ATOM 30 CG TRP G 15 44.172 68.929 177.116 1.00 80.92 ATOM 31 CD1 TRP G 15 43.866 69.049 175.794 1.00 81.32 ATOM 32 CD2 TRP G 15 43.847 70.187 177.722 1.00 81.37 ATOM 33 NE1 TRP G 15 43.370 70.305 175.536 1.00 81.58 ATOM 34 CE2 TRP G 15 43.347 71.024 176.702 1.00 81.21 ATOM 35 CE3 TRP G 15 43.929 70.688 179.029 1.00 81.18 ATOM 36 CZ2 TRP G 15 42.929 72.339 176.947 1.00 80.58 ATOM 37 CZ3 TRP G 15 43.512 71.995 179.271 1.00 80.82 ATOM 38 CH2 TRP G 15 43.019 72.803 178.233 1.00 80.30 ATOM 39 N LYS G 16 41.489 67.844 178.225 1.00 79.03 ATOM 40 CA LYS G 16 40.365 68.484 178.888 1.00 79.85 ATOM 41 C LYS G 16 39.500 67.445 179.594 1.00 80.92 ATOM 42 O LYS G 16 38.957 67.708 180.663 1.00 81.01 ATOM 43 CB LYS G 16 39.516 69.265 177.887 1.00 79.72 ATOM 44 CG LYS G 16 40.047 70.652 177.552 1.00 78.41 ATOM 45 CD LYS G 16 39.005 71.460 176.783 1.00 76.12 ATOM 46 CE LYS G 16 39.457 72.885 176.549 1.00 73.50 ATOM 47 NZ LYS G 16 38.366 73.692 175.954 1.00 72.19 ATOM 48 N GLN G 17 39.366 66.268 178.988 1.00 82.15 ATOM 49 CA GLN G 17 38.579 65.190 179.586 1.00 82.58 ATOM 50 C GLN G 17 39.390 64.610 180.736 1.00 83.22 ATOM 51 O GLN G 17 38.893 64.454 181.849 1.00 83.41 ATOM 52 CB GLN G 17 38.304 64.080 178.567 1.00 82.01 ATOM 53 CG GLN G 17 37.484 64.493 177.358 1.00 81.10 ATOM 54 CD GLN G 17 37.275 63.342 176.391 1.00 80.43 ATOM 55 OE1 GLN G 17 36.689 62.322 176.746 1.00 79.94 ATOM 56 NE2 GLN G 17 37.758 63.499 175.163 1.00 80.32 ATOM 57 N GLU G 18 40.649 64.297 180.448 1.00 83.91 ATOM 58 CA GLU G 18 41.557 63.738 181.436 1.00 85.30 ATOM 59 C GLU G 18 41.679 64.639 182.659 1.00 85.45 ATOM 60 O GLU G 18 41.850 64.157 183.778 1.00 85.95 ATOM 61 CB GLU G 18 42.932 63.514 180.807 1.00 86.62 ATOM 62 CG GLU G 18 42.962 62.370 179.805 1.00 89.02 ATOM 63 CD GLU G 18 44.295 62.245 179.089 1.00 91.09 ATOM 64 OE1 GLU G 18 45.346 62.258 179.770 1.00 91.97 ATOM 65 OE2 GLU G 18 44.290 62.126 177.843 1.00 92.43 ATOM 66 N GLU G 19 41.598 65.948 182.449 1.00 84.95 ATOM 67 CA GLU G 19 41.687 66.877 183.563 1.00 84.20 ATOM 68 C GLU G 19 40.433 66.755 184.410 1.00 84.06 ATOM 69 O GLU G 19 40.518 66.564 185.620 1.00 84.03 ATOM 70 CB GLU G 19 41.816 68.320 183.073 1.00 84.28 ATOM 71 CG GLU G 19 41.759 69.353 184.205 1.00 83.27 ATOM 72 CD GLU G 19 43.096 69.561 184.899 1.00 82.14 ATOM 73 OE1 GLU G 19 43.874 68.591 185.012 1.00 81.26 ATOM 74 OE2 GLU G 19 43.361 70.698 185.341 1.00 81.37 ATOM 75 N VAL G 20 39.271 66.868 183.771 1.00 84.04 ATOM 76 CA VAL G 20 38.002 66.776 184.482 1.00 84.92 ATOM 77 C VAL G 20 38.037 65.612 185.454 1.00 86.04 ATOM 78 O VAL G 20 37.450 65.679 186.533 1.00 86.08 ATOM 79 CB VAL G 20 36.818 66.575 183.520 1.00 84.51 ATOM 80 CG1 VAL G 20 35.529 66.433 184.304 1.00 84.73 ATOM 81 CG2 VAL G 20 36.711 67.750 182.588 1.00 85.65 ATOM 82 N ASP G 21 38.732 64.545 185.069 1.00 87.14 ATOM 83 CA ASP G 21 38.852 63.371 185.924 1.00 88.05 ATOM 84 C ASP G 21 39.756 63.676 187.115 1.00 88.56 ATOM 85 O ASP G 21 39.346 63.524 188.265 1.00 89.59 ATOM 86 CB ASP G 21 39.416 62.181 185.142 1.00 87.77 ATOM 87 CG ASP G 21 38.498 61.732 184.023 1.00 87.47 ATOM 88 OD1 ASP G 21 37.281 61.592 184.275 1.00 86.73 ATOM 89 OD2 ASP G 21 38.998 61.509 182.898 1.00 87.11 ATOM 90 N ALA G 22 40.982 64.110 186.841 1.00 88.65 ATOM 91 CA ALA G 22 41.922 64.438 187.905 1.00 88.34 ATOM 92 C ALA G 22 41.244 65.339 188.937 1.00 88.30 ATOM 93 O ALA G 22 41.466 65.198 190.142 1.00 87.26 ATOM 94 CB ALA G 22 43.142 65.131 187.322 1.00 88.11 ATOM 95 N ILE G 23 40.410 66.257 188.450 1.00 88.66 ATOM 96 CA ILE G 23 39.683 67.185 189.311 1.00 89.10 ATOM 97 C ILE G 23 38.622 66.433 190.099 1.00 89.86 ATOM 98 O ILE G 23 38.557 66.541 191.320 1.00 90.01 ATOM 99 CB ILE G 23 38.980 68.290 188.496 1.00 88.84 ATOM 100 CG1 ILE G 23 39.993 69.026 187.617 1.00 89.13 ATOM 101 CG2 ILE G 23 38.303 69.267 189.441 1.00 88.02 ATOM 102 CD1 ILE G 23 39.376 70.084 186.709 1.00 89.20 ATOM 103 N VAL G 24 37.784 65.677 189.395 1.00 91.17 ATOM 104 CA VAL G 24 36.733 64.896 190.042 1.00 91.98 ATOM 105 C VAL G 24 37.365 63.890 190.999 1.00 92.43 ATOM 106 O VAL G 24 36.720 63.418 191.935 1.00 92.37 ATOM 107 CB VAL G 24 35.870 64.131 189.005 1.00 91.41 ATOM 108 CG1 VAL G 24 34.920 63.178 189.710 1.00 91.51 ATOM 109 CG2 VAL G 24 35.074 65.111 188.168 1.00 91.01 ATOM 110 N GLU G 25 38.635 63.577 190.764 1.00 93.19 ATOM 111 CA GLU G 25 39.354 62.630 191.601 1.00 94.48 ATOM 112 C GLU G 25 39.605 63.233 192.979 1.00 95.07 ATOM 113 O GLU G 25 39.225 62.649 193.997 1.00 96.04 ATOM 114 CB GLU G 25 40.688 62.255 190.957 1.00 95.24 ATOM 115 CG GLU G 25 41.232 60.927 191.441 1.00 96.93 ATOM 116 CD GLU G 25 42.705 60.760 191.148 1.00 98.03 ATOM 117 OE1 GLU G 25 43.508 61.527 191.719 1.00 98.91 ATOM 118 OE2 GLU G 25 43.059 59.865 190.350 1.00 98.77 ATOM 119 N MET G 26 40.247 64.397 193.013 1.00 94.92 ATOM 120 CA MET G 26 40.523 65.064 194.280 1.00 94.87 ATOM 121 C MET G 26 39.246 65.542 194.950 1.00 94.04 ATOM 122 O MET G 26 39.142 65.526 196.172 1.00 93.86 ATOM 123 CB MET G 26 41.479 66.236 194.072 1.00 95.86 ATOM 124 CG MET G 26 42.916 65.789 193.896 1.00 98.24 ATOM 125 SD MET G 26 44.061 67.147 193.634 1.00100.89 ATOM 126 CE MET G 26 44.784 66.683 192.023 1.00100.21 ATOM 127 N ILE G 27 38.273 65.961 194.148 1.00 93.78 ATOM 128 CA ILE G 27 36.992 66.421 194.676 1.00 93.41 ATOM 129 C ILE G 27 36.381 65.333 195.563 1.00 93.09 ATOM 130 O ILE G 27 35.598 65.622 196.470 1.00 93.23 ATOM 131 CB ILE G 27 35.999 66.748 193.534 1.00 93.44 ATOM 132 CG1 ILE G 27 36.523 67.919 192.702 1.00 92.90 ATOM 133 CG2 ILE G 27 34.636 67.095 194.109 1.00 93.53 ATOM 134 CD1 ILE G 27 35.702 68.197 191.461 1.00 93.28 ATOM 135 N GLU G 28 36.745 64.082 195.292 1.00 92.71 ATOM 136 CA GLU G 28 36.247 62.943 196.060 1.00 91.31 ATOM 137 C GLU G 28 37.065 62.715 197.330 1.00 90.29 ATOM 138 O GLU G 28 36.527 62.287 198.351 1.00 90.14 ATOM 139 CB GLU G 28 36.254 61.680 195.190 1.00 91.07 ATOM 140 CG GLU G 28 35.012 61.538 194.312 1.00 92.15 ATOM 141 CD GLU G 28 35.080 60.353 193.361 1.00 92.85 ATOM 142 OE1 GLU G 28 35.592 59.285 193.760 1.00 93.95 ATOM 143 OE2 GLU G 28 34.606 60.483 192.213 1.00 93.17 ATOM 144 N SER G 29 38.359 63.015 197.264 1.00 88.75 ATOM 145 CA SER G 29 39.249 62.849 198.409 1.00 87.06 ATOM 146 C SER G 29 39.765 64.191 198.921 1.00 87.01 ATOM 147 O SER G 29 39.590 64.535 200.091 1.00 86.21 ATOM 148 CB SER G 29 40.431 61.958 198.024 1.00 86.19 ATOM 149 OG SER G 29 41.113 62.475 196.898 1.00 84.21 ATOM 150 N ARG G 63 40.973 75.333 184.863 1.00 67.45 ATOM 151 CA ARG G 63 39.976 76.294 184.407 1.00 68.55 ATOM 152 C ARG G 63 38.672 76.220 185.175 1.00 68.43 ATOM 153 O ARG G 63 38.153 75.141 185.447 1.00 68.44 ATOM 154 CB ARG G 63 39.671 76.099 182.924 1.00 69.42 ATOM 155 CG ARG G 63 40.778 76.533 182.012 1.00 70.17 ATOM 156 CD ARG G 63 40.420 76.282 180.568 1.00 70.74 ATOM 157 NE ARG G 63 41.558 76.574 179.709 1.00 73.26 ATOM 158 CZ ARG G 63 41.653 76.207 178.438 1.00 74.61 ATOM 159 NH1 ARG G 63 40.670 75.529 177.864 1.00 75.44 ATOM 160 NH2 ARG G 63 42.740 76.506 177.744 1.00 75.36 ATOM 161 N ASN G 64 38.136 77.390 185.491 1.00 68.60 ATOM 162 CA ASN G 64 36.887 77.508 186.224 1.00 69.68 ATOM 163 C ASN G 64 35.767 76.762 185.505 1.00 69.18 ATOM 164 O ASN G 64 34.703 76.514 186.068 1.00 68.45 ATOM 165 CB ASN G 64 36.526 78.987 186.370 1.00 70.03 ATOM 166 CG ASN G 64 37.714 79.835 186.800 1.00 71.01 ATOM 167 OD1 ASN G 64 37.608 81.057 186.910 1.00 72.80 ATOM 168 ND2 ASN G 64 38.854 79.188 187.043 1.00 69.01 ATOM 169 N THR G 65 36.013 76.414 184.250 1.00 69.65 ATOM 170 CA THR G 65 35.032 75.690 183.457 1.00 70.33 ATOM 171 C THR G 65 35.172 74.205 183.749 1.00 70.90 ATOM 172 O THR G 65 34.177 73.487 183.857 1.00 69.80 ATOM 173 CB THR G 65 35.253 75.924 181.955 1.00 69.49 ATOM 174 OG1 THR G 65 36.642 75.747 181.649 1.00 69.99 ATOM 175 CG2 THR G 65 34.821 77.321 181.563 1.00 68.36 ATOM 176 N LEU G 66 36.417 73.752 183.872 1.00 71.86 ATOM 177 CA LEU G 66 36.690 72.352 184.160 1.00 73.22 ATOM 178 C LEU G 66 36.373 72.039 185.619 1.00 74.69 ATOM 179 O LEU G 66 36.024 70.909 185.956 1.00 75.36 ATOM 180 CB LEU G 66 38.149 72.019 183.851 1.00 72.11 ATOM 181 CG LEU G 66 38.581 72.271 182.405 1.00 71.87 ATOM 182 CD1 LEU G 66 39.886 71.542 182.135 1.00 72.23 ATOM 183 CD2 LEU G 66 37.515 71.779 181.446 1.00 71.90 ATOM 184 N LEU G 67 36.495 73.039 186.485 1.00 75.35 ATOM 185 CA LEU G 67 36.186 72.841 187.890 1.00 75.11 ATOM 186 C LEU G 67 34.672 72.729 187.990 1.00 77.01 ATOM 187 O LEU G 67 34.151 71.792 188.584 1.00 77.22 ATOM 188 CB LEU G 67 36.674 74.023 188.730 1.00 71.89 ATOM 189 CG LEU G 67 38.153 74.403 188.659 1.00 69.52 ATOM 190 CD1 LEU G 67 38.444 75.386 189.768 1.00 67.15 ATOM 191 CD2 LEU G 67 39.039 73.181 188.800 1.00 67.30 ATOM 192 N GLU G 68 33.972 73.690 187.395 1.00 80.19 ATOM 193 CA GLU G 68 32.513 73.696 187.408 1.00 83.48 ATOM 194 C GLU G 68 31.990 72.405 186.808 1.00 84.66 ATOM 195 O GLU G 68 30.936 71.912 187.201 1.00 84.97 ATOM 196 CB GLU G 68 31.969 74.875 186.596 1.00 85.45 ATOM 197 CG GLU G 68 31.579 76.088 187.422 1.00 88.58 ATOM 198 CD GLU G 68 31.022 77.221 186.571 1.00 90.38 ATOM 199 OE1 GLU G 68 30.111 76.957 185.753 1.00 91.36 ATOM 200 OE2 GLU G 68 31.491 78.374 186.726 1.00 90.59 ATOM 201 N ARG G 69 32.737 71.872 185.847 1.00 85.87 ATOM 202 CA ARG G 69 32.377 70.633 185.167 1.00 86.89 ATOM 203 C ARG G 69 32.557 69.463 186.127 1.00 86.98 ATOM 204 O ARG G 69 31.619 68.711 186.385 1.00 87.46 ATOM 205 CB ARG G 69 33.274 70.443 183.938 1.00 88.06 ATOM 206 CG ARG G 69 32.949 69.248 183.049 1.00 88.16 ATOM 207 CD ARG G 69 31.609 69.414 182.368 1.00 88.48 ATOM 208 NE ARG G 69 31.611 68.841 181.026 1.00 89.23 ATOM 209 CZ ARG G 69 30.543 68.787 180.233 1.00 90.35 ATOM 210 NH1 ARG G 69 29.377 69.267 180.646 1.00 91.16 ATOM 211 NH2 ARG G 69 30.642 68.266 179.019 1.00 90.88 ATOM 212 N ALA G 70 33.771 69.331 186.656 1.00 86.79 ATOM 213 CA ALA G 70 34.112 68.261 187.586 1.00 87.30 ATOM 214 C ALA G 70 33.185 68.242 188.787 1.00 87.82 ATOM 215 O ALA G 70 32.530 67.236 189.067 1.00 88.87 ATOM 216 CB ALA G 70 35.545 68.418 188.048 1.00 87.55 ATOM 217 N LEU G 71 33.143 69.355 189.507 1.00 87.64 ATOM 218 CA LEU G 71 32.285 69.460 190.674 1.00 87.44 ATOM 219 C LEU G 71 30.854 69.123 190.273 1.00 86.98 ATOM 220 O LEU G 71 30.170 68.363 190.954 1.00 86.73 ATOM 221 CB LEU G 71 32.350 70.879 191.248 1.00 87.73 ATOM 222 CG LEU G 71 33.721 71.329 191.768 1.00 88.20 ATOM 223 CD1 LEU G 71 33.713 72.823 192.031 1.00 87.96 ATOM 224 CD2 LEU G 71 34.071 70.558 193.030 1.00 87.68 ATOM 225 N ASP G 72 30.417 69.674 189.148 1.00 87.06 ATOM 226 CA ASP G 72 29.066 69.443 188.665 1.00 87.99 ATOM 227 C ASP G 72 28.754 67.955 188.621 1.00 88.50 ATOM 228 O ASP G 72 27.611 67.559 188.401 1.00 88.51 ATOM 229 CB ASP G 72 28.892 70.054 187.275 1.00 88.90 ATOM 230 CG ASP G 72 27.452 70.424 186.978 1.00 89.37 ATOM 231 OD1 ASP G 72 26.590 69.521 186.984 1.00 89.93 ATOM 232 OD2 ASP G 72 27.182 71.621 186.738 1.00 89.51 ATOM 233 N ASP G 73 29.773 67.130 188.829 1.00 89.16 ATOM 234 CA ASP G 73 29.582 65.687 188.823 1.00 90.27 ATOM 235 C ASP G 73 29.817 65.108 190.215 1.00 90.16 ATOM 236 O ASP G 73 28.843 64.589 190.803 1.00 89.37 ATOM 237 CB ASP G 73 30.530 65.029 187.817 1.00 91.60 ATOM 238 CG ASP G 73 30.369 65.588 186.411 1.00 93.15 ATOM 239 OD1 ASP G 73 29.213 65.808 185.988 1.00 93.76 ATOM 240 OD2 ASP G 73 31.395 65.795 185.726 1.00 93.37 TER