HEADER IMMUNE SYSTEM/SIGNALING PROTEIN 05-APR-05 1ZA3 TITLE The crystal structure of the YSd1 Fab bound to DR5 COMPND MOL_ID: 3; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 10B; COMPND 3 CHAIN: R, S; COMPND 4 FRAGMENT: Extra-cellular ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.35 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG R 108 REMARK 465 THR R 109 REMARK 465 GLY R 110 REMARK 465 CYS R 111 REMARK 465 PRO R 112 REMARK 465 ARG R 113 REMARK 465 GLY R 114 REMARK 465 MET R 115 REMARK 465 VAL R 116 REMARK 465 LYS R 117 REMARK 465 VAL R 118 REMARK 465 GLY R 119 DBREF 1ZA3 R 1 130 UNP O14763 TR10B_HUMAN 54 183 SEQRES 1 R 22 LYS CYS ARG THR GLY CYS PRO ARG GLY MET VAL LYS VAL SEQRES 2 R 22 GLY ASP CYS THR PRO TRP SER ASP ILE ATOM 1 N LYS R 102 8.833 79.478 -1.373 1.00 40.87 ATOM 2 CA LYS R 102 9.937 80.409 -1.663 1.00 42.26 ATOM 3 C LYS R 102 11.262 79.658 -1.814 1.00 42.54 ATOM 4 O LYS R 102 11.444 78.603 -1.207 1.00 43.44 ATOM 5 CB LYS R 102 10.047 81.437 -0.528 1.00 44.68 ATOM 6 CG LYS R 102 10.436 82.857 -0.934 1.00 47.34 ATOM 7 CD LYS R 102 10.544 83.758 0.321 1.00 48.54 ATOM 8 CE LYS R 102 10.963 85.187 -0.006 1.00 48.54 ATOM 9 NZ LYS R 102 10.876 86.078 1.181 1.00 47.33 ATOM 10 N CYS R 103 12.190 80.203 -2.602 1.00 43.40 ATOM 11 CA CYS R 103 13.412 79.471 -2.963 1.00 45.74 ATOM 12 C CYS R 103 14.590 79.787 -2.029 1.00 43.64 ATOM 13 O CYS R 103 14.823 80.935 -1.656 1.00 41.38 ATOM 14 CB CYS R 103 13.798 79.735 -4.430 1.00 49.20 ATOM 15 SG CYS R 103 12.971 78.655 -5.642 1.00 53.97 ATOM 16 N ASP R 116 20.313 75.403 -8.809 1.00 58.29 ATOM 17 CA ASP R 116 19.503 76.525 -9.276 1.00 60.74 ATOM 18 C ASP R 116 18.014 76.318 -8.973 1.00 59.83 ATOM 19 O ASP R 116 17.533 75.183 -8.892 1.00 59.96 ATOM 20 CB ASP R 116 19.697 76.741 -10.784 1.00 62.85 ATOM 21 CG ASP R 116 21.119 77.133 -11.148 1.00 64.27 ATOM 22 OD1 ASP R 116 21.799 77.776 -10.322 1.00 65.02 ATOM 23 OD2 ASP R 116 21.640 76.843 -12.245 1.00 65.38 ATOM 24 N CYS R 117 17.294 77.427 -8.812 1.00 57.32 ATOM 25 CA CYS R 117 15.869 77.399 -8.496 1.00 54.42 ATOM 26 C CYS R 117 15.041 77.261 -9.774 1.00 52.24 ATOM 27 O CYS R 117 14.876 78.222 -10.530 1.00 51.42 ATOM 28 CB CYS R 117 15.464 78.665 -7.722 1.00 54.41 ATOM 29 SG CYS R 117 13.675 78.934 -7.544 1.00 56.17 ATOM 30 N THR R 118 14.540 76.052 -10.013 1.00 49.96 ATOM 31 CA THR R 118 13.576 75.808 -11.077 1.00 47.42 ATOM 32 C THR R 118 12.200 75.824 -10.444 1.00 44.82 ATOM 33 O THR R 118 12.080 75.772 -9.224 1.00 43.65 ATOM 34 CB THR R 118 13.792 74.430 -11.737 1.00 48.33 ATOM 35 OG1 THR R 118 13.389 73.394 -10.833 1.00 48.58 ATOM 36 CG2 THR R 118 15.268 74.143 -12.008 1.00 49.06 ATOM 37 N PRO R 119 11.160 75.888 -11.265 1.00 44.20 ATOM 38 CA PRO R 119 9.782 75.765 -10.771 1.00 45.27 ATOM 39 C PRO R 119 9.421 74.400 -10.158 1.00 47.27 ATOM 40 O PRO R 119 8.352 74.288 -9.538 1.00 44.79 ATOM 41 CB PRO R 119 8.938 76.014 -12.029 1.00 45.15 ATOM 42 CG PRO R 119 9.853 76.682 -12.994 1.00 45.31 ATOM 43 CD PRO R 119 11.205 76.136 -12.717 1.00 44.41 ATOM 44 N TRP R 120 10.272 73.388 -10.348 1.00 51.36 ATOM 45 CA TRP R 120 10.020 72.037 -9.825 1.00 53.50 ATOM 46 C TRP R 120 10.955 71.615 -8.681 1.00 51.39 ATOM 47 O TRP R 120 10.778 70.522 -8.128 1.00 50.19 ATOM 48 CB TRP R 120 10.082 70.991 -10.956 1.00 55.25 ATOM 49 CG TRP R 120 9.255 71.352 -12.147 1.00 58.48 ATOM 50 CD1 TRP R 120 7.924 71.118 -12.326 1.00 62.35 ATOM 51 CD2 TRP R 120 9.700 72.029 -13.318 1.00 60.90 ATOM 52 NE1 TRP R 120 7.514 71.608 -13.543 1.00 63.88 ATOM 53 CE2 TRP R 120 8.590 72.174 -14.172 1.00 63.02 ATOM 54 CE3 TRP R 120 10.931 72.532 -13.736 1.00 65.48 ATOM 55 CZ2 TRP R 120 8.677 72.796 -15.415 1.00 65.54 ATOM 56 CZ3 TRP R 120 11.017 73.147 -14.969 1.00 67.89 ATOM 57 CH2 TRP R 120 9.897 73.275 -15.794 1.00 67.24 ATOM 58 N SER R 121 11.927 72.461 -8.317 1.00 48.74 ATOM 59 CA SER R 121 12.842 72.137 -7.210 1.00 48.77 ATOM 60 C SER R 121 13.585 73.329 -6.604 1.00 46.29 ATOM 61 O SER R 121 13.720 74.383 -7.235 1.00 45.36 ATOM 62 CB SER R 121 13.859 71.066 -7.637 1.00 51.40 ATOM 63 OG SER R 121 15.037 71.637 -8.187 1.00 54.46 ATOM 64 N ASP R 122 14.078 73.126 -5.379 1.00 44.16 ATOM 65 CA ASP R 122 14.796 74.153 -4.623 1.00 42.23 ATOM 66 C ASP R 122 16.236 74.288 -5.113 1.00 42.58 ATOM 67 O ASP R 122 16.720 73.434 -5.854 1.00 43.55 ATOM 68 CB ASP R 122 14.784 73.805 -3.129 1.00 41.02 ATOM 69 CG ASP R 122 14.858 75.035 -2.231 1.00 41.78 ATOM 70 OD1 ASP R 122 14.773 76.173 -2.743 1.00 42.08 ATOM 71 OD2 ASP R 122 14.995 74.960 -0.989 1.00 41.67 ATOM 72 N ILE R 123 16.912 75.362 -4.707 1.00 43.01 ATOM 73 CA ILE R 123 18.324 75.575 -5.053 1.00 43.59 ATOM 74 C ILE R 123 19.222 74.418 -4.604 1.00 43.31 ATOM 75 O ILE R 123 18.897 73.686 -3.670 1.00 43.00 ATOM 76 CB ILE R 123 18.863 76.917 -4.471 1.00 43.30 ATOM 77 CG1 ILE R 123 18.586 77.026 -2.967 1.00 45.16 ATOM 78 CG2 ILE R 123 18.267 78.104 -5.205 1.00 42.88 ATOM 79 CD1 ILE R 123 19.545 77.961 -2.227 1.00 46.61 TER