HEADER RNA binding protein/RNA 11-APR-05 1ZC8 TITLE Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of TITLE 2 the 70S ribosome and tmRNA complex COMPND MOL_ID: 11; COMPND 2 MOLECULE: Elongation factor Tu; COMPND 3 CHAIN: Y; EXPDTA ELECTRON MICROSCOPY DBREF 1ZC8 Y 1 405 PDB 1ZC8 1ZC8 1 405 SEQRES 1 Y 204 LYS PRO HIS VAL ASN VAL GLY THR ILE GLY HIS VAL ASP SEQRES 2 Y 204 HIS GLY LYS THR THR LEU THR ALA ALA LEU THR TYR VAL SEQRES 3 Y 204 ALA ALA ALA GLU ASN PRO ASN VAL GLU VAL LYS ASP TYR SEQRES 4 Y 204 GLY ASP ILE ASP LYS ALA PRO GLU GLU ARG ALA ARG GLY SEQRES 5 Y 204 ILE THR ILE ASN THR ALA HIS VAL GLU TYR GLU THR ALA SEQRES 6 Y 204 LYS ARG HIS TYR SER HIS VAL ASP CYS PRO GLY HIS ALA SEQRES 7 Y 204 ASP TYR ILE LYS ASN MET ILE THR GLY ALA ALA GLN MET SEQRES 8 Y 204 ASP GLY ALA ILE LEU VAL VAL SER ALA ALA ASP GLY PRO SEQRES 9 Y 204 MET PRO GLN THR ARG GLU HIS ILE LEU LEU ALA ARG GLN SEQRES 10 Y 204 VAL GLY VAL PRO TYR ILE VAL VAL PHE MET ASN LYS VAL SEQRES 11 Y 204 ASP MET VAL ASP ASP PRO GLU LEU LEU ASP LEU VAL GLU SEQRES 12 Y 204 MET GLU VAL ARG ASP LEU LEU ASN GLN TYR GLU PHE PRO SEQRES 13 Y 204 GLY ASP GLU VAL PRO VAL ILE ARG GLY SER ALA LEU LEU SEQRES 14 Y 204 ALA LEU GLU GLU MET HIS LYS ASN PRO LYS THR LYS ARG SEQRES 15 Y 204 GLY GLU ASN GLU TRP VAL ASP LYS ILE TRP GLU LEU LEU SEQRES 16 Y 204 ASP ALA ILE ASP GLU TYR ILE PRO THR ATOM 1 CA LYS Y 9 -20.203 76.841 -62.840 0.67 40.71 ATOM 2 CA PRO Y 10 -22.893 74.242 -63.040 0.77 36.33 ATOM 3 CA HIS Y 11 -22.439 71.083 -60.937 0.98 39.32 ATOM 4 CA VAL Y 12 -22.704 67.571 -62.217 1.00 35.92 ATOM 5 CA ASN Y 13 -22.096 64.160 -60.620 0.91 34.94 ATOM 6 CA VAL Y 14 -20.236 61.448 -62.551 0.99 20.89 ATOM 7 CA GLY Y 15 -18.090 58.483 -62.020 0.98 28.82 ATOM 8 CA THR Y 16 -16.556 55.236 -63.084 0.87 39.28 ATOM 9 CA ILE Y 17 -17.968 51.836 -63.815 1.00 27.21 ATOM 10 CA GLY Y 18 -16.891 48.842 -65.784 0.99 29.51 ATOM 11 CA HIS Y 19 -15.631 45.304 -65.408 0.98 25.82 ATOM 12 CA VAL Y 20 -12.956 44.635 -62.826 1.00 37.34 ATOM 13 CA ASP Y 21 -9.533 46.055 -63.712 0.91 43.47 ATOM 14 CA HIS Y 22 -10.633 47.597 -66.932 0.98 37.01 ATOM 15 CA GLY Y 23 -8.891 50.720 -65.608 1.00 41.95 ATOM 16 CA LYS Y 24 -11.552 52.700 -63.798 0.89 43.76 ATOM 17 CA THR Y 25 -9.266 54.163 -61.155 1.00 42.37 ATOM 18 CA THR Y 26 -6.278 54.892 -63.398 1.00 44.99 ATOM 19 CA LEU Y 27 -8.561 56.850 -65.667 0.87 37.73 ATOM 20 CA THR Y 28 -9.953 58.580 -62.640 1.00 37.10 ATOM 21 CA ALA Y 29 -6.553 59.876 -61.579 1.00 49.10 ATOM 22 CA ALA Y 30 -5.735 60.678 -65.162 1.00 38.63 ATOM 23 CA LEU Y 31 -8.807 62.870 -65.329 1.00 39.30 ATOM 24 CA THR Y 32 -7.695 64.780 -62.246 0.85 45.10 ATOM 25 CA TYR Y 33 -4.267 65.451 -63.620 0.89 39.94 ATOM 26 CA VAL Y 34 -5.376 66.769 -66.971 1.00 28.41 ATOM 27 CA ALA Y 35 -8.097 68.979 -65.708 1.00 48.15 ATOM 28 CA ALA Y 36 -5.759 70.323 -63.074 1.00 53.29 ATOM 29 CA ALA Y 37 -3.449 71.546 -65.825 0.98 61.20 ATOM 30 CA GLU Y 38 -5.878 73.898 -67.472 1.00 53.08 ATOM 31 CA ASN Y 39 -7.771 74.586 -64.227 0.94 66.74 ATOM 32 CA PRO Y 40 -5.570 75.502 -61.344 0.62 81.02 ATOM 33 CA ASN Y 41 -7.426 74.526 -58.227 0.50 72.76 ATOM 34 CA VAL Y 42 -8.225 71.024 -59.336 1.00 68.13 ATOM 35 CA GLU Y 43 -6.301 69.057 -56.766 1.00 58.93 ATOM 36 CA VAL Y 44 -4.810 66.079 -58.530 0.89 46.19 ATOM 37 CA LYS Y 45 -4.916 62.492 -57.290 1.00 39.39 ATOM 38 CA ASP Y 46 -2.810 59.571 -57.950 1.00 49.13 ATOM 39 CA TYR Y 47 -3.792 56.016 -57.836 1.00 44.16 ATOM 40 CA GLY Y 48 -2.461 55.590 -54.349 0.87 41.21 ATOM 41 CA ASP Y 49 -4.336 58.728 -53.665 0.99 60.34 ATOM 42 CA ILE Y 50 -7.461 56.790 -54.630 1.00 45.58 ATOM 43 CA ASP Y 51 -7.067 53.063 -54.099 1.00 44.52 ATOM 44 CA LYS Y 52 -5.462 53.836 -50.728 1.00 46.41 ATOM 45 CA ALA Y 53 -6.692 51.583 -47.995 1.00 57.61 ATOM 46 CA PRO Y 54 -4.130 48.774 -47.741 1.00 58.50 ATOM 47 CA GLU Y 55 -6.025 45.749 -49.077 0.97 62.87 ATOM 48 CA GLU Y 56 -6.794 47.985 -51.995 1.00 60.22 ATOM 49 CA ARG Y 57 -3.085 48.783 -52.149 0.98 50.59 ATOM 50 CA ALA Y 58 -2.258 45.181 -51.496 0.95 51.60 ATOM 51 CA ARG Y 59 -4.680 43.074 -53.619 1.00 50.63 ATOM 52 CA GLY Y 60 -4.467 45.790 -56.172 0.82 45.99 ATOM 53 CA ILE Y 61 -8.233 46.413 -56.506 1.00 49.25 ATOM 54 CA THR Y 62 -10.748 49.049 -55.667 1.00 42.51 ATOM 55 CA ILE Y 63 -12.989 48.001 -52.721 0.88 41.38 ATOM 56 CA ASN Y 64 -14.424 51.171 -51.324 1.00 51.20 ATOM 57 CA THR Y 65 -15.781 53.808 -53.686 0.90 43.23 ATOM 58 CA ALA Y 66 -13.986 57.129 -53.775 0.92 37.80 ATOM 59 CA HIS Y 67 -15.158 60.718 -54.256 1.00 41.41 ATOM 60 CA VAL Y 68 -12.898 63.014 -56.196 1.00 44.48 ATOM 61 CA GLU Y 69 -13.443 66.560 -57.373 0.79 45.57 ATOM 62 CA TYR Y 70 -12.470 68.122 -60.645 0.96 40.10 ATOM 63 CA GLU Y 71 -13.573 70.639 -63.236 0.99 41.44 ATOM 64 CA THR Y 72 -13.343 71.904 -66.768 0.98 33.66 ATOM 65 CA ALA Y 73 -14.070 75.354 -68.047 0.96 44.57 ATOM 66 CA LYS Y 74 -17.772 74.481 -68.463 1.00 54.12 ATOM 67 CA ARG Y 75 -18.539 72.686 -65.228 0.98 51.81 ATOM 68 CA HIS Y 76 -17.619 71.397 -61.828 0.99 37.93 ATOM 69 CA TYR Y 77 -17.695 67.724 -61.036 1.00 48.99 ATOM 70 CA SER Y 78 -17.888 65.238 -58.131 0.86 42.83 ATOM 71 CA HIS Y 79 -16.653 61.881 -59.563 1.00 38.55 ATOM 72 CA VAL Y 80 -17.351 58.506 -57.869 0.69 39.18 ATOM 73 CA ASP Y 81 -14.897 55.785 -58.736 1.00 35.31 ATOM 74 CA CYS Y 82 -16.415 52.434 -58.255 0.98 31.50 ATOM 75 CA PRO Y 83 -15.133 48.934 -57.738 0.96 29.77 ATOM 76 CA GLY Y 84 -15.707 46.374 -60.602 0.71 44.52 ATOM 77 CA HIS Y 85 -15.146 43.243 -58.617 1.00 44.99 ATOM 78 CA ALA Y 86 -18.494 41.422 -58.345 0.96 41.15 ATOM 79 CA ASP Y 87 -17.881 40.839 -54.654 0.98 38.79 ATOM 80 CA TYR Y 88 -18.306 44.510 -54.242 1.00 59.70 ATOM 81 CA ILE Y 89 -21.358 45.467 -56.301 0.81 36.92 ATOM 82 CA LYS Y 90 -23.194 46.994 -53.342 1.00 32.68 ATOM 83 CA ASN Y 91 -20.542 49.760 -53.066 0.99 40.08 ATOM 84 CA MET Y 92 -20.682 50.285 -56.767 1.00 33.48 ATOM 85 CA ILE Y 93 -24.479 50.400 -56.642 0.96 39.49 ATOM 86 CA THR Y 94 -24.181 52.987 -53.937 0.98 35.03 ATOM 87 CA GLY Y 95 -21.892 55.166 -56.029 0.99 41.15 ATOM 88 CA ALA Y 96 -23.787 54.743 -59.207 1.00 41.13 ATOM 89 CA ALA Y 97 -26.726 55.767 -57.244 1.00 33.47 ATOM 90 CA GLN Y 98 -25.284 59.303 -57.133 0.94 42.15 ATOM 91 CA MET Y 99 -24.250 59.720 -60.738 1.00 30.99 ATOM 92 CA ASP Y 100 -26.038 61.935 -63.235 0.98 31.97 ATOM 93 CA GLY Y 101 -24.037 60.228 -65.895 1.00 27.36 ATOM 94 CA ALA Y 102 -21.643 57.313 -65.775 1.00 32.25 ATOM 95 CA ILE Y 103 -18.422 56.726 -67.578 1.00 35.23 ATOM 96 CA LEU Y 104 -18.398 53.113 -68.609 0.93 35.17 ATOM 97 CA VAL Y 105 -14.862 51.883 -69.015 0.98 37.86 ATOM 98 CA VAL Y 106 -14.177 48.949 -71.208 0.98 36.07 ATOM 99 CA SER Y 107 -10.747 47.574 -71.730 0.97 43.08 ATOM 100 CA ALA Y 108 -10.158 47.280 -75.439 0.88 42.39 ATOM 101 CA ALA Y 109 -7.976 44.350 -74.790 0.99 47.10 ATOM 102 CA ASP Y 110 -10.686 42.410 -72.999 1.00 48.26 ATOM 103 CA GLY Y 111 -13.894 43.570 -74.653 0.95 41.16 ATOM 104 CA PRO Y 112 -17.119 43.602 -72.735 1.00 31.53 ATOM 105 CA MET Y 113 -17.034 41.319 -69.672 1.00 29.57 ATOM 106 CA PRO Y 114 -19.629 40.552 -67.032 0.97 33.03 ATOM 107 CA GLN Y 115 -19.747 43.482 -64.761 1.00 28.41 ATOM 108 CA THR Y 116 -19.684 45.476 -67.984 1.00 30.99 ATOM 109 CA ARG Y 117 -23.151 44.152 -68.430 1.00 35.35 ATOM 110 CA GLU Y 118 -24.073 44.284 -64.787 0.98 29.82 ATOM 111 CA HIS Y 119 -22.892 47.741 -64.178 1.00 33.03 ATOM 112 CA ILE Y 120 -24.804 49.011 -67.083 0.99 24.02 ATOM 113 CA LEU Y 121 -28.014 47.466 -65.822 1.00 29.83 ATOM 114 CA LEU Y 122 -27.391 48.334 -62.305 1.00 29.61 ATOM 115 CA ALA Y 123 -26.641 51.966 -63.150 0.87 37.90 ATOM 116 CA ARG Y 124 -29.983 52.109 -64.728 1.00 31.36 ATOM 117 CA GLN Y 125 -31.940 50.636 -61.915 0.91 41.60 ATOM 118 CA VAL Y 126 -30.284 53.263 -59.848 0.99 46.00 ATOM 119 CA GLY Y 127 -31.157 56.268 -61.929 1.00 40.79 ATOM 120 CA VAL Y 128 -28.159 56.835 -64.238 1.00 31.93 ATOM 121 CA PRO Y 129 -29.498 58.450 -67.343 0.77 31.96 ATOM 122 CA TYR Y 130 -26.469 58.796 -69.516 1.00 31.02 ATOM 123 CA ILE Y 131 -23.385 56.818 -70.082 0.96 32.87 ATOM 124 CA VAL Y 132 -20.329 57.851 -71.958 1.00 44.66 ATOM 125 CA VAL Y 133 -18.034 54.996 -72.779 1.00 39.49 ATOM 126 CA PHE Y 134 -14.306 54.972 -72.596 1.00 40.98 ATOM 127 CA MET Y 135 -12.614 52.158 -74.376 1.00 43.42 ATOM 128 CA ASN Y 136 -9.453 51.836 -72.384 1.00 51.27 ATOM 129 CA LYS Y 137 -6.171 49.938 -72.779 1.00 38.33 ATOM 130 CA VAL Y 138 -6.014 50.864 -76.429 0.96 51.34 ATOM 131 CA ASP Y 139 -2.243 51.129 -76.208 1.00 54.41 ATOM 132 CA MET Y 140 -2.407 47.406 -75.897 1.00 41.62 ATOM 133 CA VAL Y 141 -4.169 46.862 -79.165 0.91 52.71 ATOM 134 CA ASP Y 142 -3.938 47.774 -82.812 0.85 63.43 ATOM 135 CA ASP Y 143 -6.203 45.571 -84.923 1.00 54.23 ATOM 136 CA PRO Y 144 -8.765 48.150 -85.677 1.00 51.37 ATOM 137 CA GLU Y 145 -11.351 45.495 -86.323 1.00 52.09 ATOM 138 CA LEU Y 146 -10.985 44.219 -82.833 1.00 44.53 ATOM 139 CA LEU Y 147 -11.423 47.777 -81.612 0.97 49.72 ATOM 140 CA ASP Y 148 -14.370 48.365 -83.853 0.96 51.06 ATOM 141 CA LEU Y 149 -15.867 45.146 -82.603 1.00 49.90 ATOM 142 CA VAL Y 150 -15.615 45.896 -78.978 1.00 36.71 ATOM 143 CA GLU Y 151 -17.413 49.117 -79.733 0.95 38.70 ATOM 144 CA MET Y 152 -20.393 47.350 -81.364 0.99 51.55 ATOM 145 CA GLU Y 153 -20.710 44.960 -78.546 0.92 45.91 ATOM 146 CA VAL Y 154 -20.568 47.720 -76.089 1.00 37.91 ATOM 147 CA ARG Y 155 -23.205 49.666 -77.889 0.95 39.87 ATOM 148 CA ASP Y 156 -25.372 46.657 -78.334 1.00 54.31 ATOM 149 CA LEU Y 157 -25.154 45.811 -74.719 1.00 38.21 ATOM 150 CA LEU Y 158 -26.231 49.364 -73.998 0.97 39.50 ATOM 151 CA ASN Y 159 -29.148 48.988 -76.283 0.96 39.29 ATOM 152 CA GLN Y 160 -30.177 45.916 -74.349 0.81 35.92 ATOM 153 CA TYR Y 161 -30.693 47.856 -71.140 1.00 28.90 ATOM 154 CA GLU Y 162 -31.948 50.513 -73.367 1.00 40.04 ATOM 155 CA PHE Y 163 -29.395 53.258 -73.314 1.00 34.90 ATOM 156 CA PRO Y 164 -29.192 54.879 -76.796 0.98 32.60 ATOM 157 CA GLY Y 165 -26.179 52.784 -77.600 0.90 36.74 ATOM 158 CA ASP Y 166 -26.417 54.082 -81.064 0.80 43.60 ATOM 159 CA GLU Y 167 -25.708 57.663 -79.970 0.94 53.56 ATOM 160 CA VAL Y 168 -23.588 57.006 -76.910 1.00 44.66 ATOM 161 CA PRO Y 169 -20.161 58.676 -77.210 1.00 38.11 ATOM 162 CA VAL Y 170 -17.350 56.175 -77.446 0.99 39.94 ATOM 163 CA ILE Y 171 -13.861 57.396 -76.608 1.00 37.51 ATOM 164 CA ARG Y 172 -10.891 55.102 -77.222 0.99 39.19 ATOM 165 CA GLY Y 173 -7.614 55.426 -75.256 1.00 58.63 ATOM 166 CA SER Y 174 -4.974 54.566 -72.679 1.00 56.03 ATOM 167 CA ALA Y 175 -5.438 56.067 -69.267 1.00 48.72 ATOM 168 CA LEU Y 176 -2.235 54.602 -68.076 1.00 55.98 ATOM 169 CA LEU Y 177 -0.415 56.504 -70.743 1.00 46.05 ATOM 170 CA ALA Y 178 -2.144 59.755 -70.009 1.00 51.22 ATOM 171 CA LEU Y 179 -1.429 59.523 -66.354 1.00 45.61 ATOM 172 CA GLU Y 180 2.144 58.501 -66.965 0.91 60.09 ATOM 173 CA GLU Y 181 2.505 61.484 -69.172 1.00 58.41 ATOM 174 CA MET Y 182 1.132 63.871 -66.583 0.91 58.59 ATOM 175 CA HIS Y 183 3.598 62.327 -64.278 1.00 67.33 ATOM 176 CA LYS Y 184 6.544 63.333 -66.549 1.00 64.10 ATOM 177 CA ASN Y 185 4.725 66.593 -66.757 1.00 64.30 ATOM 178 CA PRO Y 186 1.866 67.979 -65.018 1.00 57.94 ATOM 179 CA LYS Y 187 1.588 70.979 -67.155 1.00 53.26 ATOM 180 CA THR Y 188 0.710 69.301 -70.382 1.00 42.64 ATOM 181 CA LYS Y 189 -2.195 70.980 -72.105 1.00 50.15 ATOM 182 CA ARG Y 190 -4.479 70.034 -74.927 0.83 66.56 ATOM 183 CA GLY Y 191 -2.677 69.413 -78.197 0.58 66.37 ATOM 184 CA GLU Y 192 0.595 68.770 -76.445 0.81 70.50 ATOM 185 CA ASN Y 193 -0.084 65.165 -76.093 1.00 73.42 ATOM 186 CA GLU Y 194 -1.740 62.390 -77.944 0.90 67.83 ATOM 187 CA TRP Y 195 -2.804 60.243 -74.953 1.00 53.90 ATOM 188 CA VAL Y 196 -3.571 63.250 -72.883 0.91 48.89 ATOM 189 CA ASP Y 197 -5.737 64.616 -75.662 0.77 47.10 ATOM 190 CA LYS Y 198 -8.015 61.550 -75.574 1.00 48.83 ATOM 191 CA ILE Y 199 -8.853 62.507 -71.970 1.00 43.87 ATOM 192 CA TRP Y 200 -9.809 65.897 -73.297 1.00 42.98 ATOM 193 CA GLU Y 201 -12.070 63.964 -75.597 0.93 44.24 ATOM 194 CA LEU Y 202 -13.552 62.203 -72.610 1.00 39.05 ATOM 195 CA LEU Y 203 -13.773 65.405 -70.740 1.00 44.64 ATOM 196 CA ASP Y 204 -15.512 66.916 -73.653 0.74 46.30 ATOM 197 CA ALA Y 205 -17.964 64.088 -74.050 0.92 44.40 ATOM 198 CA ILE Y 206 -18.830 64.454 -70.462 0.98 41.55 ATOM 199 CA ASP Y 207 -19.206 68.219 -70.789 0.85 51.93 ATOM 200 CA GLU Y 208 -21.282 67.913 -73.932 0.94 49.75 ATOM 201 CA TYR Y 209 -23.314 64.608 -73.867 1.00 34.15 ATOM 202 CA ILE Y 210 -24.281 64.403 -70.232 0.85 36.88 ATOM 203 CA PRO Y 211 -26.733 67.215 -69.920 0.92 45.06 ATOM 204 CA THR Y 212 -26.667 69.099 -66.723 1.00 49.64 TER