HEADER TRANSCRIPTION 06-MAR-06 2DFY TITLE Crystal structure of a cyclized protein fusion of LMO4 LIM domains 1 TITLE 2 and 2 with the LIM interacting domain of LDB1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: fusion protein of LIM domain transcription factor LMO4 and COMPND 3 LIM domain-binding protein 1; COMPND 4 CHAIN: X, C; COMPND 5 MUTATION: YES; COMPND 6 ; COMPND 7 ENGINEERED: YES; COMPND 8 Cyclised fusion of LMO4 residues 18-152 to LDB1 LID residues 300-339 COMPND 9 OTHER_DETAILS: via two flexible linkers with sequence GGSGGSGGSGG and TRESGSIEF; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.65 ANGSTORMS DBREF 2DFY C 18 152 UNP P61969 LMO4_MOUSE 18 152 DBREF 2DFY C 300 339 UNP P61969 LMO4_MOUSE 300 339 SEQRES 1 C 31 GLY ASN SER GLY ALA CYS SER ALA CYS GLY GLN SER ILE SEQRES 2 C 31 PRO ALA SER GLU LEU VAL MET ARG ALA GLN GLY ASN VAL SEQRES 3 C 31 TYR HIS LEU LYS CYS ATOM 1 N GLY C 82 27.783 -30.787 65.394 1.00 46.14 ATOM 2 CA GLY C 82 26.942 -30.414 66.526 1.00 48.24 ATOM 3 C GLY C 82 27.776 -30.152 67.777 1.00 50.29 ATOM 4 O GLY C 82 28.912 -30.573 67.868 1.00 50.90 ATOM 5 N ASN C 83 27.204 -29.438 68.732 1.00 52.17 ATOM 6 CA ASN C 83 27.929 -29.051 69.948 1.00 53.13 ATOM 7 C ASN C 83 27.962 -30.224 70.883 1.00 53.76 ATOM 8 O ASN C 83 26.941 -30.556 71.473 1.00 54.47 ATOM 9 CB ASN C 83 27.219 -27.880 70.635 1.00 54.39 ATOM 10 CG ASN C 83 27.489 -26.554 69.955 1.00 57.15 ATOM 11 OD1 ASN C 83 28.580 -26.320 69.418 1.00 61.78 ATOM 12 ND2 ASN C 83 26.514 -25.657 70.011 1.00 59.88 ATOM 13 N SER C 84 29.116 -30.878 70.984 1.00 54.54 ATOM 14 CA SER C 84 29.295 -31.966 71.934 1.00 54.39 ATOM 15 C SER C 84 29.476 -31.321 73.304 1.00 54.90 ATOM 16 O SER C 84 29.701 -30.107 73.388 1.00 54.14 ATOM 17 CB SER C 84 30.524 -32.783 71.568 1.00 54.97 ATOM 18 OG SER C 84 31.706 -32.003 71.687 1.00 57.54 ATOM 19 N GLY C 85 29.353 -32.131 74.358 1.00 54.88 ATOM 20 CA GLY C 85 29.583 -31.644 75.726 1.00 54.60 ATOM 21 C GLY C 85 30.443 -32.606 76.504 1.00 54.40 ATOM 22 O GLY C 85 31.114 -33.452 75.927 1.00 54.36 ATOM 23 N ALA C 86 30.418 -32.472 77.826 1.00 54.33 ATOM 24 CA ALA C 86 31.209 -33.330 78.709 1.00 53.93 ATOM 25 C ALA C 86 30.436 -33.537 80.006 1.00 53.37 ATOM 26 O ALA C 86 29.787 -32.605 80.487 1.00 53.22 ATOM 27 CB ALA C 86 32.556 -32.684 78.989 1.00 54.43 ATOM 28 N CYS C 87 30.509 -34.747 80.555 1.00 52.85 ATOM 29 CA CYS C 87 29.756 -35.113 81.759 1.00 53.01 ATOM 30 C CYS C 87 30.466 -34.560 82.965 1.00 52.95 ATOM 31 O CYS C 87 31.647 -34.843 83.145 1.00 53.06 ATOM 32 CB CYS C 87 29.667 -36.620 81.920 1.00 52.28 ATOM 33 SG CYS C 87 28.657 -37.137 83.306 1.00 52.73 ATOM 34 N SER C 88 29.756 -33.780 83.775 1.00 53.10 ATOM 35 CA SER C 88 30.344 -33.200 84.999 1.00 53.97 ATOM 36 C SER C 88 30.710 -34.261 86.055 1.00 55.07 ATOM 37 O SER C 88 31.601 -34.043 86.902 1.00 55.13 ATOM 38 CB SER C 88 29.404 -32.160 85.596 1.00 53.20 ATOM 39 OG SER C 88 29.484 -30.939 84.881 1.00 52.59 ATOM 40 N ALA C 89 30.019 -35.396 86.019 1.00 55.60 ATOM 41 CA ALA C 89 30.275 -36.481 86.952 1.00 56.61 ATOM 42 C ALA C 89 31.508 -37.283 86.586 1.00 57.71 ATOM 43 O ALA C 89 32.415 -37.420 87.405 1.00 59.18 ATOM 44 CB ALA C 89 29.059 -37.398 87.052 1.00 56.49 ATOM 45 N CYS C 90 31.563 -37.816 85.373 1.00 58.09 ATOM 46 CA CYS C 90 32.663 -38.711 84.988 1.00 58.19 ATOM 47 C CYS C 90 33.741 -38.062 84.115 1.00 58.44 ATOM 48 O CYS C 90 34.780 -38.671 83.868 1.00 58.46 ATOM 49 CB CYS C 90 32.125 -39.948 84.278 1.00 58.46 ATOM 50 SG CYS C 90 31.493 -39.620 82.634 1.00 57.79 ATOM 51 N GLY C 91 33.488 -36.848 83.640 1.00 58.97 ATOM 52 CA GLY C 91 34.485 -36.087 82.883 1.00 59.44 ATOM 53 C GLY C 91 34.575 -36.412 81.404 1.00 60.02 ATOM 54 O GLY C 91 35.283 -35.725 80.658 1.00 59.39 ATOM 55 N GLN C 92 33.848 -37.443 80.975 1.00 60.58 ATOM 56 CA GLN C 92 33.975 -37.960 79.616 1.00 61.08 ATOM 57 C GLN C 92 33.065 -37.205 78.655 1.00 61.32 ATOM 58 O GLN C 92 31.957 -36.803 79.013 1.00 61.28 ATOM 59 CB GLN C 92 33.651 -39.456 79.564 1.00 61.57 ATOM 60 CG GLN C 92 34.470 -40.314 80.511 1.00 63.81 ATOM 61 CD GLN C 92 35.965 -40.134 80.326 1.00 66.28 ATOM 62 OE1 GLN C 92 36.572 -40.752 79.453 1.00 69.09 ATOM 63 NE2 GLN C 92 36.568 -39.283 81.155 1.00 68.14 ATOM 64 N SER C 93 33.532 -37.034 77.421 1.00 61.43 ATOM 65 CA SER C 93 32.774 -36.294 76.419 1.00 61.45 ATOM 66 C SER C 93 31.417 -36.950 76.169 1.00 61.28 ATOM 67 O SER C 93 31.245 -38.161 76.372 1.00 61.73 ATOM 68 CB SER C 93 33.553 -36.195 75.112 1.00 61.88 ATOM 69 OG SER C 93 33.602 -37.462 74.487 1.00 64.21 ATOM 70 N ILE C 94 30.455 -36.124 75.773 1.00 60.44 ATOM 71 CA ILE C 94 29.125 -36.576 75.424 1.00 59.93 ATOM 72 C ILE C 94 28.878 -36.166 73.976 1.00 59.56 ATOM 73 O ILE C 94 29.103 -35.003 73.612 1.00 59.78 ATOM 74 CB ILE C 94 28.071 -35.933 76.311 1.00 59.96 ATOM 75 CG1 ILE C 94 28.317 -36.275 77.788 0.50 59.82 ATOM 76 CG2 ILE C 94 26.665 -36.390 75.900 0.50 59.96 ATOM 77 CD1 ILE C 94 27.575 -35.360 78.755 0.50 59.62 ATOM 78 N PRO C 95 28.421 -37.113 73.133 1.00 59.02 ATOM 79 CA PRO C 95 28.120 -36.661 71.776 1.00 58.41 ATOM 80 C PRO C 95 26.865 -35.791 71.734 1.00 57.60 ATOM 81 O PRO C 95 25.946 -35.966 72.537 1.00 56.47 ATOM 82 CB PRO C 95 27.869 -37.968 70.994 1.00 58.61 ATOM 83 CG PRO C 95 28.122 -39.102 71.955 1.00 58.86 ATOM 84 CD PRO C 95 28.119 -38.540 73.339 1.00 58.95 ATOM 85 N ALA C 96 26.809 -34.892 70.760 1.00 57.48 ATOM 86 CA ALA C 96 25.618 -34.058 70.521 1.00 57.70 ATOM 87 C ALA C 96 24.297 -34.820 70.364 1.00 57.57 ATOM 88 O ALA C 96 23.236 -34.248 70.603 1.00 56.95 ATOM 89 CB ALA C 96 25.854 -33.160 69.308 1.00 57.63 ATOM 90 N SER C 97 24.366 -36.093 69.966 1.00 57.51 ATOM 91 CA SER C 97 23.174 -36.919 69.730 1.00 57.70 ATOM 92 C SER C 97 22.636 -37.573 70.985 1.00 58.03 ATOM 93 O SER C 97 21.549 -38.153 70.958 1.00 57.93 ATOM 94 CB SER C 97 23.502 -38.056 68.785 1.00 57.60 ATOM 95 OG SER C 97 24.533 -38.872 69.323 1.00 57.88 ATOM 96 N GLU C 98 23.404 -37.526 72.076 1.00 58.01 ATOM 97 CA GLU C 98 22.997 -38.257 73.268 1.00 58.00 ATOM 98 C GLU C 98 22.088 -37.402 74.131 1.00 58.00 ATOM 99 O GLU C 98 22.269 -36.195 74.218 1.00 58.47 ATOM 100 CB GLU C 98 24.220 -38.731 74.043 1.00 57.86 ATOM 101 CG GLU C 98 23.863 -39.627 75.194 1.00 57.96 ATOM 102 CD GLU C 98 25.067 -40.165 75.919 1.00 58.70 ATOM 103 OE1 GLU C 98 26.155 -40.294 75.305 1.00 58.42 ATOM 104 OE2 GLU C 98 24.900 -40.462 77.124 1.00 61.12 ATOM 105 N LEU C 99 21.104 -38.032 74.760 1.00 58.15 ATOM 106 CA LEU C 99 20.258 -37.349 75.723 1.00 58.69 ATOM 107 C LEU C 99 21.049 -37.170 77.008 1.00 59.09 ATOM 108 O LEU C 99 21.829 -38.048 77.386 1.00 59.86 ATOM 109 CB LEU C 99 18.990 -38.146 76.028 1.00 59.01 ATOM 110 CG LEU C 99 17.872 -38.059 74.989 1.00 59.70 ATOM 111 CD1 LEU C 99 16.721 -38.974 75.381 1.00 60.50 ATOM 112 CD2 LEU C 99 17.398 -36.635 74.851 1.00 60.47 ATOM 113 N VAL C 100 20.854 -36.037 77.666 1.00 59.08 ATOM 114 CA VAL C 100 21.581 -35.738 78.902 1.00 59.01 ATOM 115 C VAL C 100 20.652 -35.178 79.949 1.00 59.68 ATOM 116 O VAL C 100 19.610 -34.585 79.624 1.00 59.68 ATOM 117 CB VAL C 100 22.721 -34.714 78.686 1.00 58.96 ATOM 118 CG1 VAL C 100 23.785 -35.287 77.796 1.00 58.72 ATOM 119 CG2 VAL C 100 22.193 -33.384 78.138 1.00 58.35 ATOM 120 N MET C 101 21.037 -35.368 81.211 1.00 59.69 ATOM 121 CA MET C 101 20.385 -34.697 82.298 1.00 60.59 ATOM 122 C MET C 101 21.186 -33.426 82.565 1.00 60.62 ATOM 123 O MET C 101 22.405 -33.368 82.319 1.00 59.14 ATOM 124 CB MET C 101 20.331 -35.579 83.545 1.00 60.68 ATOM 125 CG MET C 101 19.615 -36.912 83.351 1.00 62.61 ATOM 126 SD MET C 101 17.889 -36.751 82.792 1.00 65.53 ATOM 127 CE MET C 101 17.095 -36.038 84.185 1.00 66.61 ATOM 128 N ARG C 102 20.465 -32.414 83.044 1.00 61.48 ATOM 129 CA ARG C 102 21.022 -31.108 83.321 1.00 62.02 ATOM 130 C ARG C 102 20.755 -30.765 84.768 1.00 61.82 ATOM 131 O ARG C 102 19.697 -31.083 85.300 1.00 62.46 ATOM 132 CB ARG C 102 20.413 -30.068 82.371 1.00 62.80 ATOM 133 CG ARG C 102 20.878 -30.250 80.917 1.00 63.67 ATOM 134 CD ARG C 102 20.715 -29.007 80.036 1.00 65.19 ATOM 135 NE ARG C 102 21.724 -28.970 78.956 1.00 66.29 ATOM 136 CZ ARG C 102 21.534 -29.375 77.698 1.00 68.87 ATOM 137 NH1 ARG C 102 20.358 -29.840 77.309 1.00 70.25 ATOM 138 NH2 ARG C 102 22.524 -29.302 76.806 1.00 69.67 ATOM 139 N ALA C 103 21.741 -30.168 85.427 1.00 61.04 ATOM 140 CA ALA C 103 21.547 -29.631 86.765 1.00 60.71 ATOM 141 C ALA C 103 22.569 -28.534 87.000 1.00 60.01 ATOM 142 O ALA C 103 23.747 -28.715 86.701 1.00 58.90 ATOM 143 CB ALA C 103 21.686 -30.715 87.825 1.00 60.68 ATOM 144 N GLN C 104 22.092 -27.402 87.510 1.00 59.80 ATOM 145 CA GLN C 104 22.939 -26.272 87.866 1.00 60.42 ATOM 146 C GLN C 104 23.947 -25.901 86.785 1.00 60.12 ATOM 147 O GLN C 104 25.095 -25.565 87.086 1.00 60.95 ATOM 148 CB GLN C 104 23.654 -26.580 89.177 1.00 61.07 ATOM 149 CG GLN C 104 22.689 -26.898 90.291 1.00 63.43 ATOM 150 CD GLN C 104 21.803 -25.745 90.634 1.00 65.27 ATOM 151 OE1 GLN C 104 22.270 -24.700 91.086 1.00 67.63 ATOM 152 NE2 GLN C 104 20.511 -25.923 90.437 1.00 66.94 ATOM 153 N GLY C 105 23.515 -25.957 85.529 1.00 59.29 ATOM 154 CA GLY C 105 24.359 -25.578 84.405 1.00 59.04 ATOM 155 C GLY C 105 25.392 -26.618 84.017 1.00 58.61 ATOM 156 O GLY C 105 26.284 -26.340 83.215 1.00 58.85 ATOM 157 N ASN C 106 25.280 -27.814 84.583 1.00 57.45 ATOM 158 CA ASN C 106 26.108 -28.928 84.177 1.00 57.38 ATOM 159 C ASN C 106 25.287 -29.904 83.348 1.00 56.41 ATOM 160 O ASN C 106 24.065 -29.867 83.376 1.00 55.95 ATOM 161 CB ASN C 106 26.626 -29.655 85.408 1.00 57.57 ATOM 162 CG ASN C 106 27.253 -28.709 86.416 1.00 59.33 ATOM 163 OD1 ASN C 106 26.980 -28.793 87.621 1.00 61.81 ATOM 164 ND2 ASN C 106 28.077 -27.787 85.923 1.00 56.82 ATOM 165 N VAL C 107 25.972 -30.775 82.633 1.00 56.05 ATOM 166 CA VAL C 107 25.318 -31.847 81.917 1.00 56.08 ATOM 167 C VAL C 107 25.897 -33.183 82.364 1.00 55.58 ATOM 168 O VAL C 107 27.077 -33.270 82.745 1.00 54.90 ATOM 169 CB VAL C 107 25.411 -31.658 80.379 1.00 56.67 ATOM 170 CG1 VAL C 107 24.769 -30.342 79.965 1.00 57.86 ATOM 171 CG2 VAL C 107 26.830 -31.713 79.886 1.00 57.52 ATOM 172 N TYR C 108 25.040 -34.214 82.354 1.00 55.11 ATOM 173 CA TYR C 108 25.399 -35.541 82.846 1.00 54.92 ATOM 174 C TYR C 108 24.884 -36.616 81.913 1.00 54.90 ATOM 175 O TYR C 108 23.803 -36.459 81.349 1.00 54.36 ATOM 176 CB TYR C 108 24.771 -35.805 84.206 1.00 54.81 ATOM 177 CG TYR C 108 25.133 -34.786 85.252 1.00 54.82 ATOM 178 CD1 TYR C 108 24.385 -33.622 85.402 1.00 55.17 ATOM 179 CD2 TYR C 108 26.226 -34.984 86.082 1.00 55.20 ATOM 180 CE1 TYR C 108 24.717 -32.682 86.360 1.00 55.30 ATOM 181 CE2 TYR C 108 26.565 -34.053 87.039 1.00 55.13 ATOM 182 CZ TYR C 108 25.806 -32.915 87.183 1.00 55.22 ATOM 183 OH TYR C 108 26.139 -31.979 88.134 1.00 57.17 ATOM 184 N HIS C 109 25.643 -37.704 81.783 1.00 55.13 ATOM 185 CA HIS C 109 25.110 -38.949 81.216 1.00 55.65 ATOM 186 C HIS C 109 23.936 -39.387 82.066 1.00 56.14 ATOM 187 O HIS C 109 23.965 -39.216 83.289 1.00 55.95 ATOM 188 CB HIS C 109 26.143 -40.071 81.254 1.00 55.92 ATOM 189 CG HIS C 109 27.319 -39.856 80.361 1.00 56.33 ATOM 190 ND1 HIS C 109 28.601 -39.693 80.843 1.00 57.74 ATOM 191 CD2 HIS C 109 27.418 -39.825 79.012 1.00 57.23 ATOM 192 CE1 HIS C 109 29.434 -39.540 79.828 1.00 58.42 ATOM 193 NE2 HIS C 109 28.742 -39.614 78.705 1.00 58.25 ATOM 194 N LEU C 110 22.909 -39.984 81.454 1.00 56.47 ATOM 195 CA LEU C 110 21.750 -40.430 82.237 1.00 57.21 ATOM 196 C LEU C 110 22.159 -41.332 83.400 1.00 57.13 ATOM 197 O LEU C 110 21.654 -41.183 84.526 1.00 57.84 ATOM 198 CB LEU C 110 20.700 -41.133 81.355 1.00 57.08 ATOM 199 CG LEU C 110 19.567 -40.222 80.882 1.00 58.58 ATOM 200 CD1 LEU C 110 20.073 -39.019 80.138 1.00 59.66 ATOM 201 CD2 LEU C 110 18.570 -41.011 80.002 1.00 58.36 ATOM 202 N LYS C 111 23.085 -42.242 83.143 1.00 57.61 ATOM 203 CA LYS C 111 23.501 -43.194 84.173 1.00 57.95 ATOM 204 C LYS C 111 24.501 -42.598 85.152 1.00 57.83 ATOM 205 O LYS C 111 24.868 -43.254 86.117 1.00 57.90 ATOM 206 CB LYS C 111 24.062 -44.476 83.543 1.00 58.51 ATOM 207 CG LYS C 111 23.018 -45.251 82.746 1.00 59.05 ATOM 208 CD LYS C 111 23.482 -46.677 82.444 0.50 59.10 ATOM 209 CE LYS C 111 22.321 -47.575 82.057 0.50 59.69 ATOM 210 NZ LYS C 111 21.499 -46.967 80.971 0.50 60.74 ATOM 211 N CYS C 112 24.927 -41.354 84.903 1.00 57.39 ATOM 212 CA CYS C 112 25.788 -40.620 85.835 1.00 56.82 ATOM 213 C CYS C 112 24.985 -39.710 86.753 1.00 56.35 ATOM 214 O CYS C 112 25.517 -39.178 87.724 1.00 56.46 ATOM 215 CB CYS C 112 26.837 -39.813 85.079 1.00 56.82 ATOM 216 SG CYS C 112 28.107 -40.863 84.440 1.00 56.23 ATOM 217 ZN ZN C 604 29.180 -39.438 82.925 1.00 58.53 TER