HEADER TRANSCRIPTION 31-DEC-69 2DFY TITLE Crystal structure of a cyclized protein fusion of LMO4 LIM domains 1 TITLE 2 and 2 with the LIM interacting domain of LDB1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: fusion protein of LIM domain transcription factor LMO4 and COMPND 3 LIM domain-binding protein 1; COMPND 4 CHAIN: X, C; COMPND 5 MUTATION: YES; COMPND 6 ; COMPND 7 ENGINEERED: YES; COMPND 8 Cyclised fusion of LMO4 residues 18-152 to LDB1 LID residues 300-339 COMPND 9 OTHER_DETAILS: via two flexible linkers with sequence GGSGGSGGSGG and TRESGSIEF; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.65 ANGSTORMS DBREF 2DFY C 18 152 UNP P61969 LMO4_MOUSE 18 152 DBREF 2DFY C 300 339 UNP P61969 LMO4_MOUSE 300 339 SEQRES 1 C 28 ASP VAL MET VAL VAL GLY GLU PRO THR LEU MET GLY GLY SEQRES 2 C 28 GLU PHE GLY ASP GLU ASP GLU ARG LEU ILE THR ARG LEU SEQRES 3 C 28 GLU ASN ATOM 1 N ASP C 300 17.646 -26.200 99.181 1.00 64.32 ATOM 2 CA ASP C 300 16.664 -26.035 98.106 1.00 64.06 ATOM 3 C ASP C 300 16.311 -27.380 97.454 1.00 63.26 ATOM 4 O ASP C 300 17.170 -28.076 96.937 1.00 63.13 ATOM 5 CB ASP C 300 17.160 -25.051 97.026 1.00 64.38 ATOM 6 CG ASP C 300 17.170 -23.580 97.492 1.00 65.62 ATOM 7 OD1 ASP C 300 16.354 -23.175 98.338 1.00 66.27 ATOM 8 OD2 ASP C 300 18.003 -22.804 96.984 1.00 66.40 ATOM 9 N VAL C 301 15.034 -27.732 97.474 1.00 63.02 ATOM 10 CA VAL C 301 14.541 -28.906 96.752 1.00 62.95 ATOM 11 C VAL C 301 14.376 -28.579 95.270 1.00 62.31 ATOM 12 O VAL C 301 13.715 -27.606 94.930 1.00 61.49 ATOM 13 CB VAL C 301 13.165 -29.344 97.294 1.00 63.25 ATOM 14 CG1 VAL C 301 12.671 -30.591 96.566 1.00 63.34 ATOM 15 CG2 VAL C 301 13.245 -29.578 98.788 1.00 64.07 ATOM 16 N MET C 302 14.967 -29.392 94.399 1.00 62.18 ATOM 17 CA MET C 302 14.833 -29.214 92.953 1.00 62.62 ATOM 18 C MET C 302 14.130 -30.413 92.325 1.00 61.69 ATOM 19 O MET C 302 14.131 -31.506 92.887 1.00 60.67 ATOM 20 CB MET C 302 16.199 -29.024 92.285 1.00 62.98 ATOM 21 CG MET C 302 16.811 -27.634 92.493 1.00 64.60 ATOM 22 SD MET C 302 18.548 -27.697 92.073 1.00 66.98 ATOM 23 CE MET C 302 19.174 -28.646 93.444 1.00 66.26 ATOM 24 N VAL C 303 13.527 -30.187 91.155 1.00 61.32 ATOM 25 CA VAL C 303 12.805 -31.244 90.434 1.00 60.79 ATOM 26 C VAL C 303 13.562 -31.620 89.176 1.00 60.37 ATOM 27 O VAL C 303 13.924 -30.748 88.382 1.00 60.36 ATOM 28 CB VAL C 303 11.389 -30.810 90.019 1.00 61.02 ATOM 29 CG1 VAL C 303 10.719 -31.921 89.185 1.00 60.75 ATOM 30 CG2 VAL C 303 10.559 -30.461 91.233 1.00 60.77 ATOM 31 N VAL C 304 13.774 -32.917 88.980 1.00 59.69 ATOM 32 CA VAL C 304 14.548 -33.389 87.840 1.00 59.55 ATOM 33 C VAL C 304 13.746 -33.140 86.574 1.00 59.91 ATOM 34 O VAL C 304 12.571 -33.482 86.523 1.00 60.17 ATOM 35 CB VAL C 304 14.840 -34.892 87.939 1.00 59.02 ATOM 36 CG1 VAL C 304 15.617 -35.368 86.723 1.00 58.06 ATOM 37 CG2 VAL C 304 15.601 -35.211 89.220 1.00 58.25 ATOM 38 N GLY C 305 14.373 -32.533 85.569 1.00 60.11 ATOM 39 CA GLY C 305 13.702 -32.260 84.303 1.00 60.49 ATOM 40 C GLY C 305 13.823 -33.423 83.343 1.00 60.78 ATOM 41 O GLY C 305 14.579 -34.362 83.576 1.00 60.69 ATOM 42 N GLU C 306 13.072 -33.359 82.248 1.00 61.34 ATOM 43 CA GLU C 306 13.185 -34.346 81.187 1.00 61.32 ATOM 44 C GLU C 306 14.544 -34.245 80.525 1.00 61.24 ATOM 45 O GLU C 306 15.089 -33.154 80.391 1.00 61.58 ATOM 46 CB GLU C 306 12.116 -34.104 80.120 1.00 61.75 ATOM 47 CG GLU C 306 10.734 -34.558 80.536 1.00 63.36 ATOM 48 CD GLU C 306 10.640 -36.063 80.675 1.00 64.33 ATOM 49 OE1 GLU C 306 11.221 -36.789 79.842 1.00 66.86 ATOM 50 OE2 GLU C 306 9.978 -36.521 81.621 1.00 66.08 ATOM 51 N PRO C 307 15.087 -35.377 80.063 1.00 61.29 ATOM 52 CA PRO C 307 16.338 -35.270 79.337 1.00 60.85 ATOM 53 C PRO C 307 16.193 -34.426 78.079 1.00 61.01 ATOM 54 O PRO C 307 15.079 -34.233 77.576 1.00 61.70 ATOM 55 CB PRO C 307 16.673 -36.716 78.954 1.00 61.09 ATOM 56 CG PRO C 307 15.791 -37.570 79.750 1.00 61.58 ATOM 57 CD PRO C 307 14.607 -36.765 80.160 1.00 61.43 ATOM 58 N THR C 308 17.329 -33.957 77.577 1.00 60.27 ATOM 59 CA THR C 308 17.409 -33.159 76.362 1.00 59.63 ATOM 60 C THR C 308 18.632 -33.595 75.605 1.00 58.74 ATOM 61 O THR C 308 19.534 -34.194 76.172 1.00 58.76 ATOM 62 CB THR C 308 17.602 -31.670 76.682 1.00 60.08 ATOM 63 OG1 THR C 308 18.622 -31.537 77.690 1.00 60.96 ATOM 64 CG2 THR C 308 16.318 -31.051 77.173 1.00 60.47 ATOM 65 N LEU C 309 18.673 -33.280 74.319 1.00 58.02 ATOM 66 CA LEU C 309 19.841 -33.586 73.495 1.00 57.21 ATOM 67 C LEU C 309 20.992 -32.643 73.808 1.00 56.81 ATOM 68 O LEU C 309 20.793 -31.454 74.007 1.00 57.25 ATOM 69 CB LEU C 309 19.496 -33.487 72.007 1.00 56.66 ATOM 70 CG LEU C 309 18.450 -34.504 71.524 1.00 55.07 ATOM 71 CD1 LEU C 309 17.875 -34.097 70.170 0.50 54.78 ATOM 72 CD2 LEU C 309 19.036 -35.912 71.449 0.50 53.51 ATOM 73 N MET C 310 22.197 -33.195 73.817 1.00 56.43 ATOM 74 CA MET C 310 23.404 -32.463 74.162 1.00 56.31 ATOM 75 C MET C 310 23.648 -31.289 73.215 1.00 56.29 ATOM 76 O MET C 310 23.955 -30.178 73.641 1.00 55.67 ATOM 77 CB MET C 310 24.577 -33.434 74.128 1.00 56.31 ATOM 78 CG MET C 310 25.945 -32.842 74.271 1.00 55.84 ATOM 79 SD MET C 310 26.254 -32.302 75.989 1.00 57.05 ATOM 80 CE MET C 310 26.141 -30.523 75.838 1.00 57.57 ATOM 81 N GLY C 311 23.523 -31.536 71.917 1.00 56.57 ATOM 82 CA GLY C 311 23.712 -30.482 70.930 1.00 56.63 ATOM 83 C GLY C 311 22.659 -29.390 71.007 1.00 56.95 ATOM 84 O GLY C 311 22.889 -28.267 70.555 1.00 57.29 ATOM 85 N GLY C 312 21.503 -29.708 71.579 1.00 57.06 ATOM 86 CA GLY C 312 20.432 -28.735 71.694 1.00 56.81 ATOM 87 C GLY C 312 19.830 -28.363 70.351 1.00 56.85 ATOM 88 O GLY C 312 19.857 -29.144 69.396 1.00 56.94 ATOM 89 N GLU C 313 19.272 -27.164 70.276 1.00 56.51 ATOM 90 CA GLU C 313 18.737 -26.663 69.014 1.00 56.20 ATOM 91 C GLU C 313 19.918 -26.184 68.183 1.00 56.09 ATOM 92 O GLU C 313 20.941 -25.763 68.728 1.00 57.38 ATOM 93 CB GLU C 313 17.743 -25.523 69.265 0.50 55.99 ATOM 94 CG GLU C 313 16.525 -25.934 70.086 0.01 56.06 ATOM 95 CD GLU C 313 15.534 -24.800 70.294 0.01 56.31 ATOM 96 OE1 GLU C 313 15.872 -23.634 69.994 0.01 56.31 ATOM 97 OE2 GLU C 313 14.410 -25.076 70.763 0.01 56.30 ATOM 98 N PHE C 314 19.827 -26.307 66.865 1.00 55.30 ATOM 99 CA PHE C 314 20.845 -25.734 66.022 1.00 54.38 ATOM 100 C PHE C 314 20.177 -25.058 64.859 1.00 53.50 ATOM 101 O PHE C 314 19.034 -25.370 64.527 1.00 54.75 ATOM 102 CB PHE C 314 21.871 -26.804 65.577 1.00 54.20 ATOM 103 CG PHE C 314 21.267 -27.963 64.805 1.00 54.11 ATOM 104 CD1 PHE C 314 20.673 -29.021 65.453 1.00 50.41 ATOM 105 CD2 PHE C 314 21.319 -27.986 63.415 1.00 53.89 ATOM 106 CE1 PHE C 314 20.136 -30.081 64.738 1.00 53.65 ATOM 107 CE2 PHE C 314 20.793 -29.034 62.712 1.00 54.69 ATOM 108 CZ PHE C 314 20.193 -30.081 63.363 1.00 53.34 ATOM 109 N GLY C 315 20.877 -24.103 64.267 1.00 52.27 ATOM 110 CA GLY C 315 20.361 -23.365 63.140 1.00 51.00 ATOM 111 C GLY C 315 20.353 -24.217 61.889 1.00 50.28 ATOM 112 O GLY C 315 20.957 -25.282 61.844 1.00 51.07 ATOM 113 N ASP C 316 19.696 -23.715 60.865 1.00 48.52 ATOM 114 CA ASP C 316 19.495 -24.451 59.624 1.00 46.46 ATOM 115 C ASP C 316 20.335 -23.845 58.497 1.00 44.33 ATOM 116 O ASP C 316 20.073 -24.050 57.317 1.00 42.20 ATOM 117 CB ASP C 316 17.976 -24.486 59.289 1.00 47.12 ATOM 118 CG ASP C 316 17.406 -23.105 58.938 1.00 48.96 ATOM 119 OD1 ASP C 316 18.189 -22.133 58.797 1.00 50.10 ATOM 120 OD2 ASP C 316 16.163 -23.007 58.757 1.00 51.21 ATOM 121 N GLU C 317 21.398 -23.119 58.828 1.00 42.67 ATOM 122 CA GLU C 317 22.156 -22.433 57.776 1.00 41.38 ATOM 123 C GLU C 317 22.829 -23.362 56.730 1.00 39.82 ATOM 124 O GLU C 317 23.095 -22.937 55.604 1.00 39.63 ATOM 125 CB GLU C 317 23.222 -21.478 58.375 0.50 41.12 ATOM 126 CG GLU C 317 24.327 -22.167 59.194 0.50 41.76 ATOM 127 CD GLU C 317 23.923 -22.580 60.617 0.50 43.17 ATOM 128 OE1 GLU C 317 22.802 -22.272 61.099 0.50 44.17 ATOM 129 OE2 GLU C 317 24.750 -23.227 61.285 0.50 45.54 ATOM 130 N ASP C 318 23.108 -24.601 57.137 1.00 38.69 ATOM 131 CA ASP C 318 23.766 -25.587 56.280 1.00 37.26 ATOM 132 C ASP C 318 22.761 -26.587 55.695 1.00 36.29 ATOM 133 O ASP C 318 23.161 -27.497 54.942 1.00 35.59 ATOM 134 CB ASP C 318 24.831 -26.324 57.083 1.00 37.36 ATOM 135 CG ASP C 318 26.021 -25.430 57.457 1.00 39.53 ATOM 136 OD1 ASP C 318 26.361 -24.509 56.674 1.00 39.50 ATOM 137 OD2 ASP C 318 26.581 -25.660 58.539 1.00 40.64 ATOM 138 N GLU C 319 21.480 -26.437 56.081 1.00 35.59 ATOM 139 CA GLU C 319 20.412 -27.355 55.647 1.00 35.74 ATOM 140 C GLU C 319 19.978 -26.993 54.230 1.00 34.66 ATOM 141 O GLU C 319 19.800 -25.795 53.905 1.00 35.91 ATOM 142 CB GLU C 319 19.208 -27.360 56.595 1.00 36.09 ATOM 143 CG GLU C 319 18.147 -28.445 56.238 1.00 37.97 ATOM 144 CD GLU C 319 16.995 -28.565 57.232 1.00 38.43 ATOM 145 OE1 GLU C 319 16.612 -27.562 57.848 1.00 41.05 ATOM 146 OE2 GLU C 319 16.421 -29.687 57.361 1.00 41.55 ATOM 147 N ARG C 320 19.797 -28.037 53.391 1.00 32.79 ATOM 148 CA ARG C 320 19.393 -27.867 52.009 1.00 32.90 ATOM 149 C ARG C 320 18.246 -28.864 51.792 1.00 32.27 ATOM 150 O ARG C 320 18.463 -30.078 51.857 1.00 32.70 ATOM 151 CB ARG C 320 20.520 -28.154 51.052 1.00 33.47 ATOM 152 CG ARG C 320 21.762 -27.293 51.349 1.00 35.49 ATOM 153 CD ARG C 320 21.460 -25.844 50.950 1.00 38.20 ATOM 154 NE ARG C 320 22.643 -24.997 51.108 1.00 40.04 ATOM 155 CZ ARG C 320 22.911 -24.295 52.201 1.00 42.06 ATOM 156 NH1 ARG C 320 22.088 -24.282 53.222 1.00 43.63 ATOM 157 NH2 ARG C 320 24.030 -23.575 52.261 1.00 44.92 ATOM 158 N LEU C 321 17.020 -28.388 51.626 1.00 31.49 ATOM 159 CA LEU C 321 15.934 -29.346 51.478 1.00 31.03 ATOM 160 C LEU C 321 16.031 -30.127 50.195 1.00 29.65 ATOM 161 O LEU C 321 16.548 -29.622 49.216 1.00 29.64 ATOM 162 CB LEU C 321 14.569 -28.651 51.493 1.00 31.29 ATOM 163 CG LEU C 321 14.177 -27.928 52.775 1.00 34.08 ATOM 164 CD1 LEU C 321 12.716 -27.437 52.625 1.00 36.82 ATOM 165 CD2 LEU C 321 14.350 -28.741 54.038 1.00 36.74 ATOM 166 N ILE C 322 15.511 -31.353 50.217 1.00 29.35 ATOM 167 CA ILE C 322 15.433 -32.236 49.067 1.00 29.96 ATOM 168 C ILE C 322 14.003 -32.255 48.568 1.00 29.48 ATOM 169 O ILE C 322 13.061 -32.442 49.377 1.00 29.45 ATOM 170 CB ILE C 322 15.857 -33.687 49.438 1.00 30.41 ATOM 171 CG1 ILE C 322 17.336 -33.708 49.897 1.00 30.44 ATOM 172 CG2 ILE C 322 15.702 -34.632 48.262 1.00 29.49 ATOM 173 CD1 ILE C 322 17.731 -34.972 50.696 1.00 32.53 ATOM 174 N THR C 323 13.862 -32.103 47.260 1.00 29.68 ATOM 175 CA THR C 323 12.578 -32.223 46.593 1.00 30.29 ATOM 176 C THR C 323 12.517 -33.507 45.772 1.00 30.30 ATOM 177 O THR C 323 13.342 -33.748 44.908 1.00 29.89 ATOM 178 CB THR C 323 12.277 -30.983 45.752 1.00 30.66 ATOM 179 OG1 THR C 323 12.346 -29.832 46.619 1.00 31.50 ATOM 180 CG2 THR C 323 10.855 -31.093 45.135 1.00 32.22 ATOM 181 N ARG C 324 11.490 -34.313 46.058 1.00 30.16 ATOM 182 CA ARG C 324 11.225 -35.498 45.293 1.00 31.65 ATOM 183 C ARG C 324 10.327 -35.120 44.108 1.00 31.34 ATOM 184 O ARG C 324 9.191 -34.564 44.317 1.00 32.91 ATOM 185 CB ARG C 324 10.558 -36.569 46.186 1.00 32.38 ATOM 186 CG ARG C 324 11.499 -37.178 47.249 1.00 33.01 ATOM 187 CD ARG C 324 10.846 -37.791 48.487 1.00 35.04 ATOM 188 NE ARG C 324 9.941 -38.904 48.166 1.00 36.40 ATOM 189 CZ ARG C 324 10.330 -40.174 48.113 1.00 38.79 ATOM 190 NH1 ARG C 324 11.598 -40.512 48.350 1.00 37.27 ATOM 191 NH2 ARG C 324 9.434 -41.144 47.852 1.00 39.60 ATOM 192 N LEU C 325 10.798 -35.426 42.914 1.00 31.46 ATOM 193 CA LEU C 325 10.163 -35.096 41.633 1.00 33.69 ATOM 194 C LEU C 325 9.783 -36.330 40.782 1.00 35.02 ATOM 195 O LEU C 325 10.498 -37.329 40.757 1.00 34.26 ATOM 196 CB LEU C 325 11.109 -34.251 40.736 1.00 34.24 ATOM 197 CG LEU C 325 11.617 -32.898 41.249 1.00 34.96 ATOM 198 CD1 LEU C 325 12.738 -32.418 40.302 1.00 38.09 ATOM 199 CD2 LEU C 325 10.471 -31.923 41.381 1.00 39.15 ATOM 200 N GLU C 326 8.686 -36.215 40.038 1.00 36.60 ATOM 201 CA GLU C 326 8.365 -37.134 38.958 1.00 38.79 ATOM 202 C GLU C 326 8.754 -36.498 37.644 1.00 40.75 ATOM 203 O GLU C 326 8.442 -35.300 37.398 1.00 43.27 ATOM 204 CB GLU C 326 6.834 -37.456 38.938 1.00 38.71 ATOM 205 CG GLU C 326 6.460 -38.509 37.913 1.00 40.84 ATOM 206 CD GLU C 326 5.041 -39.008 38.119 1.00 43.91 ATOM 207 OE1 GLU C 326 4.257 -38.305 38.777 1.00 51.06 ATOM 208 OE2 GLU C 326 4.700 -40.129 37.656 1.00 50.29 ATOM 209 N ASN C 327 9.365 -37.283 36.775 1.00 42.77 ATOM 210 CA ASN C 327 10.061 -36.851 35.578 1.00 43.87 ATOM 211 C ASN C 327 9.053 -36.528 34.499 1.00 46.02 ATOM 212 O ASN C 327 7.984 -37.176 34.434 1.00 49.20 ATOM 213 CB ASN C 327 11.022 -38.000 35.150 1.00 44.54 ATOM 214 CG ASN C 327 12.055 -37.604 34.077 1.00 45.20 ATOM 215 OD1 ASN C 327 11.760 -36.776 33.185 1.00 49.78 ATOM 216 ND2 ASN C 327 13.279 -38.261 34.119 1.00 42.93 TER