HEADER LIGASE/RNA 31-DEC-69 2DU3 TITLE Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA TITLE 2 synthetase complexed with tRNACys and O-phosphoserine COMPND MOL_ID: 2; COMPND 2 MOLECULE: O-phosphoseryl-tRNA synthetase; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.-; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.60 ANGSTORMS DBREF 2DU3 A 1 534 UNP O30126 O30126_ARCF 1 534 SEQRES 1 A 32 ASN GLU VAL VAL VAL TYR LYS GLY ASP ILE TYR GLY ILE SEQRES 2 A 32 PRO LYS THR LYS LYS TRP ARG SER PHE PHE GLU GLU GLY SEQRES 3 A 32 VAL PRO THR GLY ILE ARG ATOM 1 N ASN A 432 39.306 24.543 -21.295 1.00 69.20 ATOM 2 CA ASN A 432 39.285 25.910 -21.802 1.00 62.83 ATOM 3 C ASN A 432 38.834 26.869 -20.699 1.00 64.57 ATOM 4 O ASN A 432 37.911 26.570 -19.927 1.00 61.02 ATOM 5 CB ASN A 432 38.332 26.008 -22.987 1.00 69.75 ATOM 6 CG ASN A 432 39.025 25.764 -24.308 1.00 79.34 ATOM 7 OD1 ASN A 432 40.052 25.084 -24.370 1.00 84.76 ATOM 8 ND2 ASN A 432 38.461 26.312 -25.379 1.00 73.36 ATOM 9 N GLU A 433 39.495 28.019 -20.619 1.00 61.57 ATOM 10 CA GLU A 433 39.160 29.021 -19.614 1.00 66.92 ATOM 11 C GLU A 433 38.498 30.248 -20.255 1.00 58.10 ATOM 12 O GLU A 433 38.833 30.637 -21.376 1.00 52.06 ATOM 13 CB GLU A 433 40.426 29.431 -18.847 1.00 68.53 ATOM 14 CG GLU A 433 40.233 30.602 -17.883 1.00 90.65 ATOM 15 CD GLU A 433 41.373 30.750 -16.876 1.00 96.49 ATOM 16 OE1 GLU A 433 42.549 30.527 -17.251 1.00 92.96 ATOM 17 OE2 GLU A 433 41.085 31.105 -15.709 1.00 87.72 ATOM 18 N VAL A 434 37.536 30.836 -19.552 1.00 58.80 ATOM 19 CA VAL A 434 36.853 32.029 -20.046 1.00 53.92 ATOM 20 C VAL A 434 37.685 33.247 -19.670 1.00 51.59 ATOM 21 O VAL A 434 37.997 33.441 -18.493 1.00 57.98 ATOM 22 CB VAL A 434 35.465 32.192 -19.401 1.00 56.69 ATOM 23 CG1 VAL A 434 34.789 33.460 -19.929 1.00 57.73 ATOM 24 CG2 VAL A 434 34.609 30.964 -19.688 1.00 64.86 ATOM 25 N VAL A 435 38.073 34.057 -20.653 1.00 43.96 ATOM 26 CA VAL A 435 38.847 35.250 -20.329 1.00 56.96 ATOM 27 C VAL A 435 38.339 36.459 -21.102 1.00 57.74 ATOM 28 O VAL A 435 37.902 36.334 -22.247 1.00 56.24 ATOM 29 CB VAL A 435 40.383 35.065 -20.595 1.00 50.29 ATOM 30 CG1 VAL A 435 40.776 33.607 -20.414 1.00 54.69 ATOM 31 CG2 VAL A 435 40.760 35.571 -21.968 1.00 61.81 ATOM 32 N VAL A 436 38.377 37.622 -20.454 1.00 57.10 ATOM 33 CA VAL A 436 37.942 38.869 -21.072 1.00 46.35 ATOM 34 C VAL A 436 39.187 39.611 -21.550 1.00 52.00 ATOM 35 O VAL A 436 40.132 39.835 -20.788 1.00 51.93 ATOM 36 CB VAL A 436 37.187 39.765 -20.067 1.00 55.36 ATOM 37 CG1 VAL A 436 36.661 41.012 -20.779 1.00 51.35 ATOM 38 CG2 VAL A 436 36.038 38.978 -19.406 1.00 40.97 ATOM 39 N TYR A 437 39.195 39.986 -22.818 1.00 47.02 ATOM 40 CA TYR A 437 40.343 40.680 -23.373 1.00 52.58 ATOM 41 C TYR A 437 39.890 41.715 -24.390 1.00 54.78 ATOM 42 O TYR A 437 39.192 41.389 -25.361 1.00 54.09 ATOM 43 CB TYR A 437 41.289 39.664 -24.026 1.00 60.23 ATOM 44 CG TYR A 437 42.521 40.279 -24.643 1.00 61.36 ATOM 45 CD1 TYR A 437 42.682 40.334 -26.028 1.00 63.81 ATOM 46 CD2 TYR A 437 43.520 40.826 -23.839 1.00 65.33 ATOM 47 CE1 TYR A 437 43.815 40.927 -26.596 1.00 65.80 ATOM 48 CE2 TYR A 437 44.648 41.416 -24.393 1.00 69.23 ATOM 49 CZ TYR A 437 44.790 41.465 -25.767 1.00 65.75 ATOM 50 OH TYR A 437 45.907 42.055 -26.299 1.00 72.10 ATOM 51 N LYS A 438 40.291 42.963 -24.159 1.00 50.90 ATOM 52 CA LYS A 438 39.929 44.077 -25.032 1.00 47.86 ATOM 53 C LYS A 438 38.451 44.089 -25.391 1.00 46.93 ATOM 54 O LYS A 438 38.083 44.174 -26.565 1.00 64.76 ATOM 55 CB LYS A 438 40.752 44.052 -26.319 1.00 47.78 ATOM 56 CG LYS A 438 42.232 44.330 -26.137 1.00 59.46 ATOM 57 CD LYS A 438 42.925 44.391 -27.496 1.00 75.55 ATOM 58 CE LYS A 438 44.439 44.503 -27.368 1.00 76.82 ATOM 59 NZ LYS A 438 44.828 45.671 -26.535 1.00 79.70 ATOM 60 N GLY A 439 37.599 43.990 -24.380 1.00 45.04 ATOM 61 CA GLY A 439 36.171 44.018 -24.626 1.00 41.52 ATOM 62 C GLY A 439 35.502 42.744 -25.108 1.00 51.64 ATOM 63 O GLY A 439 34.275 42.716 -25.236 1.00 55.98 ATOM 64 N ASP A 440 36.269 41.691 -25.387 1.00 48.16 ATOM 65 CA ASP A 440 35.648 40.454 -25.850 1.00 53.49 ATOM 66 C ASP A 440 35.737 39.369 -24.799 1.00 53.25 ATOM 67 O ASP A 440 36.603 39.401 -23.924 1.00 50.83 ATOM 68 CB ASP A 440 36.308 39.945 -27.136 1.00 58.61 ATOM 69 CG ASP A 440 36.298 40.971 -28.249 1.00 67.41 ATOM 70 OD1 ASP A 440 35.202 41.465 -28.600 1.00 70.78 ATOM 71 OD2 ASP A 440 37.393 41.276 -28.775 1.00 65.84 ATOM 72 N ILE A 441 34.820 38.414 -24.883 1.00 53.99 ATOM 73 CA ILE A 441 34.817 37.290 -23.965 1.00 53.51 ATOM 74 C ILE A 441 35.225 36.083 -24.815 1.00 60.95 ATOM 75 O ILE A 441 34.551 35.754 -25.792 1.00 60.40 ATOM 76 CB ILE A 441 33.415 37.070 -23.369 1.00 48.99 ATOM 77 CG1 ILE A 441 32.947 38.357 -22.684 1.00 49.09 ATOM 78 CG2 ILE A 441 33.438 35.894 -22.373 1.00 47.11 ATOM 79 CD1 ILE A 441 31.574 38.269 -22.023 1.00 38.99 ATOM 80 N TYR A 442 36.339 35.447 -24.456 1.00 60.22 ATOM 81 CA TYR A 442 36.847 34.281 -25.187 1.00 62.25 ATOM 82 C TYR A 442 36.865 32.994 -24.362 1.00 63.17 ATOM 83 O TYR A 442 37.134 33.020 -23.158 1.00 65.55 ATOM 84 CB TYR A 442 38.268 34.549 -25.678 1.00 62.82 ATOM 85 CG TYR A 442 38.351 35.388 -26.925 1.00 81.35 ATOM 86 CD1 TYR A 442 38.178 34.816 -28.184 1.00 86.81 ATOM 87 CD2 TYR A 442 38.604 36.759 -26.852 1.00 90.90 ATOM 88 CE1 TYR A 442 38.257 35.587 -29.348 1.00 89.68 ATOM 89 CE2 TYR A 442 38.684 37.543 -28.010 1.00 97.77 ATOM 90 CZ TYR A 442 38.510 36.948 -29.255 1.00 99.33 ATOM 91 OH TYR A 442 38.587 37.707 -30.404 1.00106.57 ATOM 92 N GLY A 443 36.560 31.876 -25.023 1.00 66.35 ATOM 93 CA GLY A 443 36.589 30.565 -24.383 1.00 61.16 ATOM 94 C GLY A 443 37.800 29.889 -25.004 1.00 61.64 ATOM 95 O GLY A 443 37.703 29.287 -26.074 1.00 68.67 ATOM 96 N ILE A 444 38.945 29.987 -24.339 1.00 57.47 ATOM 97 CA ILE A 444 40.181 29.453 -24.889 1.00 57.64 ATOM 98 C ILE A 444 41.059 28.647 -23.939 1.00 63.04 ATOM 99 O ILE A 444 40.866 28.668 -22.724 1.00 62.34 ATOM 100 CB ILE A 444 41.039 30.608 -25.457 1.00 54.71 ATOM 101 CG1 ILE A 444 41.292 31.642 -24.356 1.00 56.87 ATOM 102 CG2 ILE A 444 40.337 31.252 -26.645 1.00 45.49 ATOM 103 CD1 ILE A 444 41.996 32.891 -24.825 1.00 64.20 ATOM 104 N PRO A 445 42.039 27.913 -24.503 1.00 63.59 ATOM 105 CA PRO A 445 42.989 27.080 -23.765 1.00 57.28 ATOM 106 C PRO A 445 44.322 27.804 -23.594 1.00 60.35 ATOM 107 O PRO A 445 44.724 28.603 -24.451 1.00 59.30 ATOM 108 CB PRO A 445 43.126 25.865 -24.662 1.00 58.24 ATOM 109 CG PRO A 445 43.152 26.503 -26.014 1.00 58.71 ATOM 110 CD PRO A 445 42.040 27.541 -25.933 1.00 61.60 ATOM 111 N LYS A 446 45.002 27.536 -22.487 1.00 61.32 ATOM 112 CA LYS A 446 46.290 28.160 -22.242 1.00 69.44 ATOM 113 C LYS A 446 47.308 27.568 -23.205 1.00 77.71 ATOM 114 O LYS A 446 47.883 26.512 -22.955 1.00 82.89 ATOM 115 CB LYS A 446 46.732 27.924 -20.803 1.00 71.93 ATOM 116 CG LYS A 446 46.111 28.868 -19.800 1.00 76.14 ATOM 117 CD LYS A 446 46.454 28.441 -18.383 1.00 78.03 ATOM 118 CE LYS A 446 46.409 29.615 -17.423 1.00 86.45 ATOM 119 NZ LYS A 446 47.465 30.608 -17.753 1.00 79.94 ATOM 120 N THR A 447 47.516 28.263 -24.314 1.00 84.85 ATOM 121 CA THR A 447 48.448 27.833 -25.339 1.00 83.64 ATOM 122 C THR A 447 49.288 29.031 -25.731 1.00 93.49 ATOM 123 O THR A 447 48.763 30.131 -25.868 1.00 99.94 ATOM 124 CB THR A 447 47.693 27.346 -26.573 1.00 85.87 ATOM 125 OG1 THR A 447 46.880 26.225 -26.212 1.00 86.82 ATOM 126 CG2 THR A 447 48.660 26.949 -27.676 1.00101.58 ATOM 127 N LYS A 448 50.589 28.818 -25.904 1.00 99.14 ATOM 128 CA LYS A 448 51.517 29.882 -26.291 1.00 96.47 ATOM 129 C LYS A 448 50.852 30.811 -27.307 1.00 93.11 ATOM 130 O LYS A 448 51.200 31.987 -27.422 1.00 95.60 ATOM 131 CB LYS A 448 52.790 29.270 -26.891 1.00102.24 ATOM 132 CG LYS A 448 53.656 28.472 -25.900 1.00111.28 ATOM 133 CD LYS A 448 52.861 27.424 -25.092 1.00119.38 ATOM 134 CE LYS A 448 52.209 26.341 -25.968 1.00115.37 ATOM 135 NZ LYS A 448 51.356 25.387 -25.181 1.00 88.96 ATOM 136 N LYS A 449 49.887 30.265 -28.035 1.00 83.99 ATOM 137 CA LYS A 449 49.143 31.011 -29.033 1.00 79.59 ATOM 138 C LYS A 449 48.322 32.135 -28.384 1.00 87.72 ATOM 139 O LYS A 449 48.141 33.196 -28.975 1.00 91.56 ATOM 140 CB LYS A 449 48.207 30.057 -29.778 1.00 75.48 ATOM 141 CG LYS A 449 47.422 30.693 -30.913 1.00 71.45 ATOM 142 CD LYS A 449 46.355 29.745 -31.451 1.00 75.09 ATOM 143 CE LYS A 449 45.689 30.304 -32.704 1.00 88.73 ATOM 144 NZ LYS A 449 45.156 31.683 -32.492 1.00 99.13 ATOM 145 N TRP A 450 47.831 31.905 -27.168 1.00 86.36 ATOM 146 CA TRP A 450 47.017 32.898 -26.472 1.00 82.63 ATOM 147 C TRP A 450 47.664 33.565 -25.253 1.00 83.78 ATOM 148 O TRP A 450 46.951 34.069 -24.382 1.00 82.90 ATOM 149 CB TRP A 450 45.701 32.271 -26.010 1.00 82.24 ATOM 150 CG TRP A 450 44.967 31.491 -27.049 1.00 84.57 ATOM 151 CD1 TRP A 450 44.933 30.131 -27.183 1.00 89.43 ATOM 152 CD2 TRP A 450 44.126 32.017 -28.083 1.00 83.32 ATOM 153 NE1 TRP A 450 44.119 29.779 -28.234 1.00 79.87 ATOM 154 CE2 TRP A 450 43.612 30.917 -28.805 1.00 73.43 ATOM 155 CE3 TRP A 450 43.754 33.313 -28.468 1.00 82.96 ATOM 156 CZ2 TRP A 450 42.746 31.072 -29.889 1.00 68.69 ATOM 157 CZ3 TRP A 450 42.889 33.466 -29.548 1.00 80.22 ATOM 158 CH2 TRP A 450 42.396 32.350 -30.244 1.00 69.57 ATOM 159 N ARG A 451 48.991 33.570 -25.170 1.00 81.27 ATOM 160 CA ARG A 451 49.644 34.195 -24.019 1.00 90.62 ATOM 161 C ARG A 451 49.114 35.604 -23.812 1.00 84.76 ATOM 162 O ARG A 451 48.691 35.971 -22.715 1.00 75.06 ATOM 163 CB ARG A 451 51.164 34.253 -24.206 1.00 96.73 ATOM 164 CG ARG A 451 51.889 32.970 -23.839 1.00112.22 ATOM 165 CD ARG A 451 53.397 33.157 -23.900 1.00119.75 ATOM 166 NE ARG A 451 54.112 31.938 -23.536 1.00132.08 ATOM 167 CZ ARG A 451 55.437 31.841 -23.457 1.00139.09 ATOM 168 NH1 ARG A 451 55.999 30.688 -23.118 1.00141.08 ATOM 169 NH2 ARG A 451 56.201 32.894 -23.714 1.00141.86 ATOM 170 N SER A 452 49.145 36.385 -24.884 1.00 83.63 ATOM 171 CA SER A 452 48.678 37.763 -24.870 1.00 84.12 ATOM 172 C SER A 452 47.369 37.938 -24.100 1.00 79.43 ATOM 173 O SER A 452 47.243 38.838 -23.265 1.00 72.80 ATOM 174 CB SER A 452 48.501 38.248 -26.310 1.00 88.36 ATOM 175 OG SER A 452 47.863 37.248 -27.091 1.00 93.71 ATOM 176 N PHE A 453 46.398 37.076 -24.379 1.00 68.63 ATOM 177 CA PHE A 453 45.108 37.159 -23.712 1.00 59.16 ATOM 178 C PHE A 453 45.190 36.891 -22.218 1.00 62.94 ATOM 179 O PHE A 453 44.682 37.676 -21.420 1.00 66.92 ATOM 180 CB PHE A 453 44.116 36.199 -24.357 1.00 53.83 ATOM 181 CG PHE A 453 43.613 36.658 -25.695 1.00 66.53 ATOM 182 CD1 PHE A 453 44.500 37.130 -26.663 1.00 66.36 ATOM 183 CD2 PHE A 453 42.254 36.597 -26.001 1.00 60.64 ATOM 184 CE1 PHE A 453 44.042 37.533 -27.923 1.00 74.20 ATOM 185 CE2 PHE A 453 41.789 36.998 -27.256 1.00 74.49 ATOM 186 CZ PHE A 453 42.683 37.466 -28.221 1.00 68.10 ATOM 187 N PHE A 454 45.828 35.796 -21.826 1.00 57.94 ATOM 188 CA PHE A 454 45.931 35.496 -20.406 1.00 62.56 ATOM 189 C PHE A 454 46.849 36.479 -19.676 1.00 58.87 ATOM 190 O PHE A 454 46.757 36.639 -18.457 1.00 63.30 ATOM 191 CB PHE A 454 46.439 34.063 -20.186 1.00 61.42 ATOM 192 CG PHE A 454 45.469 32.999 -20.615 1.00 65.28 ATOM 193 CD1 PHE A 454 45.320 32.674 -21.963 1.00 63.11 ATOM 194 CD2 PHE A 454 44.693 32.330 -19.669 1.00 63.73 ATOM 195 CE1 PHE A 454 44.410 31.697 -22.362 1.00 52.58 ATOM 196 CE2 PHE A 454 43.784 31.356 -20.054 1.00 60.76 ATOM 197 CZ PHE A 454 43.641 31.038 -21.409 1.00 57.81 ATOM 198 N GLU A 455 47.725 37.145 -20.418 1.00 63.13 ATOM 199 CA GLU A 455 48.660 38.080 -19.804 1.00 70.29 ATOM 200 C GLU A 455 48.179 39.524 -19.751 1.00 74.64 ATOM 201 O GLU A 455 48.511 40.259 -18.821 1.00 79.10 ATOM 202 CB GLU A 455 50.008 38.022 -20.527 1.00 77.95 ATOM 203 CG GLU A 455 50.691 36.662 -20.456 1.00 98.47 ATOM 204 CD GLU A 455 52.098 36.670 -21.036 1.00107.68 ATOM 205 OE1 GLU A 455 52.255 36.953 -22.247 1.00113.76 ATOM 206 OE2 GLU A 455 53.047 36.391 -20.272 1.00105.30 ATOM 207 N GLU A 456 47.397 39.934 -20.742 1.00 70.65 ATOM 208 CA GLU A 456 46.913 41.306 -20.787 1.00 62.84 ATOM 209 C GLU A 456 45.412 41.430 -20.548 1.00 56.77 ATOM 210 O GLU A 456 44.894 42.530 -20.413 1.00 69.59 ATOM 211 CB GLU A 456 47.289 41.931 -22.128 1.00 65.35 ATOM 212 CG GLU A 456 48.784 41.883 -22.419 1.00 71.59 ATOM 213 CD GLU A 456 49.111 42.184 -23.875 1.00 91.15 ATOM 214 OE1 GLU A 456 50.301 42.072 -24.262 1.00 80.37 ATOM 215 OE2 GLU A 456 48.174 42.532 -24.631 1.00 99.01 ATOM 216 N GLY A 457 44.712 40.306 -20.497 1.00 54.95 ATOM 217 CA GLY A 457 43.282 40.349 -20.252 1.00 47.52 ATOM 218 C GLY A 457 43.010 39.975 -18.801 1.00 54.61 ATOM 219 O GLY A 457 43.907 40.079 -17.952 1.00 46.43 ATOM 220 N VAL A 458 41.780 39.564 -18.495 1.00 40.46 ATOM 221 CA VAL A 458 41.478 39.149 -17.138 1.00 49.70 ATOM 222 C VAL A 458 40.805 37.784 -17.170 1.00 53.51 ATOM 223 O VAL A 458 39.703 37.611 -17.702 1.00 48.85 ATOM 224 CB VAL A 458 40.595 40.190 -16.359 1.00 46.69 ATOM 225 CG1 VAL A 458 41.168 41.594 -16.546 1.00 38.76 ATOM 226 CG2 VAL A 458 39.171 40.134 -16.812 1.00 69.73 ATOM 227 N PRO A 459 41.508 36.773 -16.654 1.00 59.10 ATOM 228 CA PRO A 459 40.964 35.416 -16.623 1.00 64.32 ATOM 229 C PRO A 459 39.855 35.367 -15.595 1.00 52.75 ATOM 230 O PRO A 459 39.983 35.904 -14.499 1.00 51.43 ATOM 231 CB PRO A 459 42.172 34.569 -16.230 1.00 63.47 ATOM 232 CG PRO A 459 43.324 35.342 -16.842 1.00 73.47 ATOM 233 CD PRO A 459 42.966 36.756 -16.439 1.00 70.87 ATOM 234 N THR A 460 38.763 34.721 -15.954 1.00 54.53 ATOM 235 CA THR A 460 37.640 34.631 -15.052 1.00 48.75 ATOM 236 C THR A 460 37.897 33.554 -14.013 1.00 52.47 ATOM 237 O THR A 460 37.241 33.512 -12.976 1.00 49.84 ATOM 238 CB THR A 460 36.382 34.269 -15.810 1.00 48.79 ATOM 239 OG1 THR A 460 35.243 34.475 -14.965 1.00 83.43 ATOM 240 CG2 THR A 460 36.443 32.803 -16.229 1.00 47.72 ATOM 241 N GLY A 461 38.853 32.676 -14.306 1.00 60.30 ATOM 242 CA GLY A 461 39.164 31.590 -13.397 1.00 40.15 ATOM 243 C GLY A 461 38.176 30.432 -13.532 1.00 52.97 ATOM 244 O GLY A 461 38.143 29.528 -12.707 1.00 53.87 ATOM 245 N ILE A 462 37.364 30.453 -14.577 1.00 52.57 ATOM 246 CA ILE A 462 36.385 29.400 -14.780 1.00 51.53 ATOM 247 C ILE A 462 36.630 28.713 -16.115 1.00 55.42 ATOM 248 O ILE A 462 36.770 29.362 -17.159 1.00 57.71 ATOM 249 CB ILE A 462 34.952 29.969 -14.758 1.00 56.38 ATOM 250 CG1 ILE A 462 34.732 30.738 -13.453 1.00 53.67 ATOM 251 CG2 ILE A 462 33.930 28.840 -14.898 1.00 49.77 ATOM 252 CD1 ILE A 462 33.374 31.437 -13.348 1.00 32.12 ATOM 253 N ARG A 463 36.700 27.390 -16.069 1.00 55.19 ATOM 254 CA ARG A 463 36.918 26.590 -17.267 1.00 60.24 ATOM 255 C ARG A 463 35.635 25.841 -17.600 1.00 59.56 ATOM 256 O ARG A 463 34.737 25.713 -16.753 1.00 51.24 ATOM 257 CB ARG A 463 38.040 25.583 -17.025 1.00 58.85 ATOM 258 CG ARG A 463 39.362 26.211 -16.674 1.00 61.45 ATOM 259 CD ARG A 463 40.293 25.175 -16.107 1.00 46.94 ATOM 260 NE ARG A 463 39.680 24.506 -14.965 1.00 60.04 ATOM 261 CZ ARG A 463 40.215 23.465 -14.332 1.00 60.08 ATOM 262 NH1 ARG A 463 39.583 22.914 -13.301 1.00 51.99 ATOM 263 NH2 ARG A 463 41.382 22.972 -14.734 1.00 50.75 TER