HEADER IMMUNE SYSTEM/APOPTOSIS 09-JUN-06 2H9G TITLE Crystal structure of phage derived Fab BdF1 with human Death Receptor TITLE 2 5 (DR5) COMPND MOL_ID: 3; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 10B COMPND 3 precursor; COMPND 4 CHAIN: R, S; COMPND 5 extra cellular ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.32 ANGSTORMS DBREF 2H9G S 1 130 UNP O14763 TR10B_HUMAN 54 183 SEQRES 1 S 23 ARG CYS THR ARG CYS ASP SER GLY GLU VAL GLU LEU SER SEQRES 2 S 23 PRO CYS THR THR THR ARG ASN THR VAL CYS ATOM 1 N ARG S 62 36.280 18.558 6.721 1.00 15.93 ATOM 2 CA ARG S 62 35.614 19.856 6.553 1.00 17.59 ATOM 3 C ARG S 62 36.613 21.017 6.416 1.00 18.24 ATOM 4 O ARG S 62 37.575 21.110 7.184 1.00 17.14 ATOM 5 CB ARG S 62 34.672 20.124 7.739 1.00 18.44 ATOM 6 CG ARG S 62 33.258 19.578 7.559 1.00 18.59 ATOM 7 CD ARG S 62 32.285 20.654 7.082 1.00 18.97 ATOM 8 NE ARG S 62 31.690 21.392 8.201 1.00 18.67 ATOM 9 CZ ARG S 62 30.547 21.074 8.814 1.00 18.14 ATOM 10 NH1 ARG S 62 29.831 20.015 8.437 1.00 17.95 ATOM 11 NH2 ARG S 62 30.112 21.826 9.819 1.00 17.32 ATOM 12 N CYS S 63 36.372 21.897 5.443 1.00 18.40 ATOM 13 CA CYS S 63 37.230 23.065 5.220 1.00 19.52 ATOM 14 C CYS S 63 37.079 24.054 6.374 1.00 20.15 ATOM 15 O CYS S 63 35.966 24.270 6.861 1.00 18.85 ATOM 16 CB CYS S 63 36.873 23.765 3.900 1.00 18.69 ATOM 17 SG CYS S 63 36.973 22.730 2.403 1.00 17.56 ATOM 18 N THR S 64 38.192 24.648 6.808 1.00 22.51 ATOM 19 CA THR S 64 38.171 25.634 7.898 1.00 23.82 ATOM 20 C THR S 64 37.814 27.018 7.356 1.00 25.19 ATOM 21 O THR S 64 38.564 27.590 6.565 1.00 26.63 ATOM 22 CB THR S 64 39.534 25.726 8.640 1.00 23.77 ATOM 23 OG1 THR S 64 39.970 24.418 9.032 1.00 25.03 ATOM 24 CG2 THR S 64 39.413 26.594 9.884 1.00 23.01 ATOM 25 N ARG S 65 36.673 27.552 7.788 1.00 25.60 ATOM 26 CA ARG S 65 36.235 28.885 7.366 1.00 25.42 ATOM 27 C ARG S 65 36.951 29.967 8.175 1.00 25.42 ATOM 28 O ARG S 65 37.231 29.780 9.361 1.00 25.41 ATOM 29 CB ARG S 65 34.716 29.029 7.521 1.00 26.71 ATOM 30 CG ARG S 65 33.896 28.203 6.533 1.00 27.45 ATOM 31 CD ARG S 65 34.017 28.741 5.111 1.00 28.21 ATOM 32 NE ARG S 65 32.990 28.203 4.217 1.00 28.31 ATOM 33 CZ ARG S 65 33.017 26.997 3.646 1.00 29.35 ATOM 34 NH1 ARG S 65 34.022 26.150 3.866 1.00 29.50 ATOM 35 NH2 ARG S 65 32.020 26.630 2.848 1.00 29.30 ATOM 36 N CYS S 66 37.244 31.096 7.528 1.00 25.05 ATOM 37 CA CYS S 66 37.909 32.222 8.193 1.00 24.44 ATOM 38 C CYS S 66 36.892 33.103 8.913 1.00 24.20 ATOM 39 O CYS S 66 35.686 32.861 8.848 1.00 23.88 ATOM 40 CB CYS S 66 38.699 33.064 7.187 1.00 23.50 ATOM 41 SG CYS S 66 39.846 32.137 6.119 1.00 22.61 ATOM 42 N ASP S 67 36.408 33.232 9.733 0.00 19.81 ATOM 43 CA ASP S 67 35.235 33.825 10.365 0.00 19.31 ATOM 44 C ASP S 67 35.182 35.338 10.119 0.00 18.72 ATOM 45 O ASP S 67 35.815 35.831 9.194 0.00 19.00 ATOM 46 CB ASP S 67 35.218 33.476 11.853 0.00 19.20 ATOM 47 CG ASP S 67 35.101 31.983 12.097 0.00 19.30 ATOM 48 OD1 ASP S 67 35.780 31.139 11.485 0.00 18.59 ATOM 49 OD2 ASP S 67 34.283 31.576 12.942 0.00 19.60 ATOM 50 N SER S 68 34.426 36.067 10.930 0.00 18.20 ATOM 51 CA SER S 68 34.247 37.506 10.747 0.00 17.47 ATOM 52 C SER S 68 35.450 38.355 11.174 0.00 17.50 ATOM 53 O SER S 68 35.354 39.581 11.206 0.00 17.30 ATOM 54 CB SER S 68 32.997 37.974 11.488 0.00 17.28 ATOM 55 OG SER S 68 32.586 39.250 11.041 0.00 17.55 ATOM 56 N GLY S 69 36.567 37.713 11.508 0.00 17.14 ATOM 57 CA GLY S 69 37.809 38.407 11.796 0.00 16.71 ATOM 58 C GLY S 69 39.013 37.770 11.134 0.00 16.24 ATOM 59 O GLY S 69 40.110 37.806 11.682 0.00 15.29 ATOM 60 N GLU S 70 38.802 37.200 9.955 0.00 16.64 ATOM 61 CA GLU S 70 39.850 36.523 9.198 0.00 16.72 ATOM 62 C GLU S 70 39.563 36.598 7.701 0.00 16.80 ATOM 63 O GLU S 70 38.441 36.345 7.270 0.00 16.96 ATOM 64 CB GLU S 70 39.950 35.055 9.613 0.00 16.77 ATOM 65 CG GLU S 70 40.667 34.793 10.924 0.00 16.47 ATOM 66 CD GLU S 70 39.729 34.350 12.024 0.00 16.10 ATOM 67 OE1 GLU S 70 39.193 33.228 11.936 0.00 14.14 ATOM 68 OE2 GLU S 70 39.529 35.121 12.976 0.00 16.59 ATOM 69 N VAL S 71 40.576 36.939 6.916 0.00 16.74 ATOM 70 CA VAL S 71 40.436 37.020 5.465 0.00 16.89 ATOM 71 C VAL S 71 40.897 35.735 4.788 0.00 16.64 ATOM 72 O VAL S 71 41.735 35.011 5.319 0.00 16.28 ATOM 73 CB VAL S 71 41.214 38.224 4.876 0.00 17.57 ATOM 74 CG1 VAL S 71 40.849 39.512 5.598 0.00 17.64 ATOM 75 CG2 VAL S 71 42.725 37.988 4.909 0.00 17.97 ATOM 76 N GLU S 72 40.347 35.464 3.613 0.00 16.16 ATOM 77 CA GLU S 72 40.713 34.283 2.845 0.00 15.66 ATOM 78 C GLU S 72 41.945 34.549 1.994 0.00 15.33 ATOM 79 O GLU S 72 42.180 35.676 1.568 0.00 15.50 ATOM 80 CB GLU S 72 39.550 33.833 1.964 0.00 15.37 ATOM 81 CG GLU S 72 39.594 32.362 1.603 0.00 14.63 ATOM 82 CD GLU S 72 38.452 31.946 0.705 0.00 13.96 ATOM 83 OE1 GLU S 72 38.593 32.068 -0.522 0.00 13.78 ATOM 84 OE2 GLU S 72 37.416 31.498 1.225 0.00 12.80 ATOM 85 N LEU S 73 42.764 33.563 1.768 1.00 4.88 ATOM 86 CA LEU S 73 44.031 33.597 1.048 1.00 4.82 ATOM 87 C LEU S 73 43.961 32.699 -0.186 1.00 4.48 ATOM 88 O LEU S 73 44.118 33.168 -1.313 1.00 2.65 ATOM 89 CB LEU S 73 45.175 33.146 1.959 1.00 5.02 ATOM 90 CG LEU S 73 46.545 33.744 1.646 1.00 4.25 ATOM 91 CD1 LEU S 73 46.775 34.940 2.545 1.00 6.64 ATOM 92 CD2 LEU S 73 47.665 32.732 1.825 1.00 3.42 ATOM 93 N SER S 74 43.723 31.408 0.040 1.00 5.39 ATOM 94 CA SER S 74 43.616 30.426 -1.041 1.00 6.17 ATOM 95 C SER S 74 42.419 29.501 -0.798 1.00 7.64 ATOM 96 O SER S 74 42.375 28.810 0.226 1.00 5.19 ATOM 97 CB SER S 74 44.902 29.602 -1.160 1.00 3.98 ATOM 98 OG SER S 74 45.238 28.979 0.066 1.00 2.00 ATOM 99 N PRO S 75 41.442 29.492 -1.733 1.00 9.60 ATOM 100 CA PRO S 75 40.235 28.665 -1.612 1.00 9.64 ATOM 101 C PRO S 75 40.498 27.212 -1.211 1.00 10.90 ATOM 102 O PRO S 75 41.593 26.690 -1.430 1.00 11.24 ATOM 103 CB PRO S 75 39.636 28.717 -3.022 1.00 9.78 ATOM 104 CG PRO S 75 40.081 30.017 -3.575 1.00 9.56 ATOM 105 CD PRO S 75 41.428 30.298 -2.972 1.00 9.14 ATOM 106 N CYS S 76 39.490 26.572 -0.626 1.00 12.45 ATOM 107 CA CYS S 76 39.573 25.155 -0.289 1.00 12.09 ATOM 108 C CYS S 76 39.425 24.335 -1.574 1.00 12.73 ATOM 109 O CYS S 76 38.480 24.542 -2.342 1.00 13.99 ATOM 110 CB CYS S 76 38.484 24.771 0.722 1.00 13.22 ATOM 111 SG CYS S 76 38.777 23.201 1.588 1.00 16.29 ATOM 112 N THR S 77 40.376 23.435 -1.816 1.00 11.05 ATOM 113 CA THR S 77 40.306 22.507 -2.947 1.00 9.13 ATOM 114 C THR S 77 40.108 21.092 -2.405 1.00 6.19 ATOM 115 O THR S 77 39.931 20.909 -1.199 1.00 2.00 ATOM 116 CB THR S 77 41.583 22.568 -3.837 1.00 8.58 ATOM 117 OG1 THR S 77 42.701 22.003 -3.135 1.00 8.40 ATOM 118 CG2 THR S 77 41.900 24.001 -4.243 1.00 7.72 ATOM 119 N THR S 78 40.135 20.105 -3.299 1.00 5.72 ATOM 120 CA THR S 78 39.963 18.705 -2.922 1.00 6.52 ATOM 121 C THR S 78 41.157 18.142 -2.142 1.00 6.47 ATOM 122 O THR S 78 40.981 17.245 -1.317 1.00 7.44 ATOM 123 CB THR S 78 39.707 17.795 -4.159 1.00 6.66 ATOM 124 OG1 THR S 78 40.825 17.854 -5.055 1.00 3.07 ATOM 125 CG2 THR S 78 38.433 18.211 -4.896 1.00 6.95 ATOM 126 N THR S 79 42.359 18.662 -2.391 1.00 5.56 ATOM 127 CA THR S 79 43.582 18.097 -1.802 1.00 7.34 ATOM 128 C THR S 79 44.266 18.974 -0.748 1.00 9.05 ATOM 129 O THR S 79 45.122 18.489 -0.004 1.00 11.78 ATOM 130 CB THR S 79 44.613 17.756 -2.896 1.00 7.92 ATOM 131 OG1 THR S 79 44.996 18.947 -3.595 1.00 10.99 ATOM 132 CG2 THR S 79 44.028 16.761 -3.886 1.00 7.35 ATOM 133 N ARG S 80 43.891 20.249 -0.675 1.00 10.25 ATOM 134 CA ARG S 80 44.559 21.204 0.216 1.00 9.30 ATOM 135 C ARG S 80 43.554 22.023 1.014 1.00 9.59 ATOM 136 O ARG S 80 42.647 22.630 0.442 1.00 10.26 ATOM 137 CB ARG S 80 45.445 22.151 -0.597 1.00 9.89 ATOM 138 CG ARG S 80 46.115 23.269 -0.186 0.00 16.20 ATOM 139 CD ARG S 80 46.562 24.393 -1.106 0.00 16.43 ATOM 140 NE ARG S 80 47.124 25.524 -0.381 0.00 16.48 ATOM 141 CZ ARG S 80 47.526 26.660 -0.942 0.00 16.62 ATOM 142 NH1 ARG S 80 47.431 26.839 -2.249 0.00 16.12 ATOM 143 NH2 ARG S 80 48.024 27.631 -0.190 0.00 16.50 ATOM 144 N ASN S 81 43.725 22.042 2.334 1.00 8.91 ATOM 145 CA ASN S 81 42.903 22.874 3.200 1.00 8.89 ATOM 146 C ASN S 81 43.190 24.360 2.959 1.00 11.62 ATOM 147 O ASN S 81 44.332 24.752 2.684 1.00 9.17 ATOM 148 CB ASN S 81 43.158 22.523 4.663 1.00 8.44 ATOM 149 CG ASN S 81 42.200 23.226 5.617 1.00 8.75 ATOM 150 OD1 ASN S 81 41.080 23.592 5.249 1.00 8.74 ATOM 151 ND2 ASN S 81 42.642 23.412 6.854 1.00 5.38 ATOM 152 N THR S 82 42.144 25.175 3.056 1.00 12.04 ATOM 153 CA THR S 82 42.256 26.615 2.845 1.00 12.19 ATOM 154 C THR S 82 43.184 27.288 3.861 1.00 12.17 ATOM 155 O THR S 82 43.386 26.783 4.960 1.00 11.86 ATOM 156 CB THR S 82 40.865 27.312 2.850 1.00 12.85 ATOM 157 OG1 THR S 82 41.034 28.735 2.762 1.00 12.84 ATOM 158 CG2 THR S 82 40.070 26.983 4.104 1.00 12.26 ATOM 159 N VAL S 83 43.752 28.422 3.461 1.00 13.09 ATOM 160 CA VAL S 83 44.646 29.206 4.309 1.00 14.15 ATOM 161 C VAL S 83 43.984 30.551 4.603 1.00 14.87 ATOM 162 O VAL S 83 43.514 31.220 3.682 1.00 14.68 ATOM 163 CB VAL S 83 46.006 29.446 3.607 1.00 14.35 ATOM 164 CG1 VAL S 83 46.958 30.239 4.509 1.00 13.82 ATOM 165 CG2 VAL S 83 46.637 28.116 3.182 1.00 13.39 ATOM 166 N CYS S 84 43.938 30.937 5.879 1.00 16.21 ATOM 167 CA CYS S 84 43.367 32.225 6.288 1.00 17.14 ATOM 168 C CYS S 84 44.471 33.253 6.510 1.00 18.60 ATOM 169 O CYS S 84 45.505 32.947 7.105 1.00 19.51 ATOM 170 CB CYS S 84 42.532 32.077 7.565 1.00 19.34 ATOM 171 SG CYS S 84 41.021 31.075 7.394 1.00 21.09 TER