HEADER IMMUNE SYSTEM 31-DEC-69 2J4W TITLE Structure of a Plasmodium vivax apical membrane antigen 1-Fab TITLE 2 F8.12.19 complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: APICAL MEMBRANE ANTIGEN 1; COMPND 3 CHAIN: D; COMPND 4 MUTATION: YES; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.50 ANGSTORMS DBREF 2J4W D 43 487 UNP Q9TY14 Q9TY14_PLAV 1 445 SEQRES 1 D 34 ILE PHE ILE SER ASN ASP LYS GLU SER ILE LYS CYS PRO SEQRES 2 D 34 CYS GLU PRO GLU ARG ILE SER GLU SER THR CYS ASN PHE SEQRES 3 D 34 TYR VAL CYS ASN CYS VAL GLU LYS ATOM 1 N ILE D 421 46.921 25.275 26.128 1.00 88.83 ATOM 2 CA ILE D 421 46.646 25.456 24.652 1.00 89.36 ATOM 3 C ILE D 421 47.449 24.418 23.833 1.00 88.58 ATOM 4 O ILE D 421 48.675 24.328 23.964 1.00 88.34 ATOM 5 CB ILE D 421 46.887 26.955 24.174 1.00 89.57 ATOM 6 CG1 ILE D 421 46.210 27.953 25.144 1.00 89.66 ATOM 7 CG2 ILE D 421 46.428 27.174 22.713 1.00 88.32 ATOM 8 CD1 ILE D 421 46.755 29.397 25.108 1.00 89.81 ATOM 9 N PHE D 422 46.729 23.632 23.023 1.00 87.78 ATOM 10 CA PHE D 422 47.266 22.501 22.222 1.00 86.44 ATOM 11 C PHE D 422 47.993 22.956 20.934 1.00 83.83 ATOM 12 O PHE D 422 49.219 22.804 20.797 1.00 84.04 ATOM 13 CB PHE D 422 46.115 21.535 21.836 1.00 87.86 ATOM 14 CG PHE D 422 45.854 20.411 22.832 1.00 90.02 ATOM 15 CD1 PHE D 422 45.761 19.080 22.381 1.00 90.66 ATOM 16 CD2 PHE D 422 45.668 20.673 24.205 1.00 90.73 ATOM 17 CE1 PHE D 422 45.500 18.016 23.281 1.00 91.43 ATOM 18 CE2 PHE D 422 45.411 19.615 25.119 1.00 91.14 ATOM 19 CZ PHE D 422 45.326 18.285 24.653 1.00 90.63 ATOM 20 N ILE D 423 47.201 23.475 19.994 1.00 79.98 ATOM 21 CA ILE D 423 47.660 24.040 18.733 1.00 76.48 ATOM 22 C ILE D 423 47.253 25.530 18.730 1.00 74.16 ATOM 23 O ILE D 423 46.516 25.969 19.617 1.00 73.88 ATOM 24 CB ILE D 423 47.028 23.282 17.531 1.00 76.21 ATOM 25 CG1 ILE D 423 47.620 23.769 16.200 1.00 76.58 ATOM 26 CG2 ILE D 423 45.502 23.403 17.564 1.00 76.18 ATOM 27 CD1 ILE D 423 47.001 23.161 14.935 1.00 76.43 ATOM 28 N SER D 424 47.735 26.296 17.752 1.00 70.70 ATOM 29 CA SER D 424 47.422 27.718 17.614 1.00 67.87 ATOM 30 C SER D 424 47.965 28.135 16.284 1.00 66.45 ATOM 31 O SER D 424 48.863 27.470 15.773 1.00 65.64 ATOM 32 CB SER D 424 48.126 28.536 18.696 1.00 67.72 ATOM 33 OG SER D 424 47.831 29.919 18.586 1.00 65.69 ATOM 34 N ASN D 425 47.453 29.221 15.707 1.00 65.14 ATOM 35 CA ASN D 425 48.164 29.766 14.545 1.00 65.10 ATOM 36 C ASN D 425 49.035 30.996 14.856 1.00 63.44 ATOM 37 O ASN D 425 49.522 31.693 13.960 1.00 63.49 ATOM 38 CB ASN D 425 47.305 29.821 13.255 1.00 66.36 ATOM 39 CG ASN D 425 46.452 31.062 13.138 1.00 68.98 ATOM 40 OD1 ASN D 425 45.916 31.581 14.120 1.00 71.20 ATOM 41 ND2 ASN D 425 46.300 31.535 11.907 1.00 70.33 ATOM 42 N ASP D 426 49.250 31.195 16.156 1.00 61.52 ATOM 43 CA ASP D 426 50.167 32.178 16.725 1.00 60.53 ATOM 44 C ASP D 426 51.264 31.422 17.523 1.00 59.06 ATOM 45 O ASP D 426 51.000 30.875 18.612 1.00 58.88 ATOM 46 CB ASP D 426 49.384 33.145 17.640 1.00 61.65 ATOM 47 CG ASP D 426 50.231 34.339 18.137 1.00 64.38 ATOM 48 OD1 ASP D 426 49.971 35.504 17.704 1.00 63.65 ATOM 49 OD2 ASP D 426 51.152 34.098 18.962 1.00 65.17 ATOM 50 N LYS D 427 52.481 31.412 16.969 1.00 56.34 ATOM 51 CA LYS D 427 53.652 30.716 17.524 1.00 54.38 ATOM 52 C LYS D 427 53.899 30.879 19.045 1.00 53.82 ATOM 53 O LYS D 427 54.139 29.896 19.754 1.00 53.45 ATOM 54 CB LYS D 427 54.886 31.148 16.740 1.00 53.63 ATOM 55 CG LYS D 427 56.139 30.348 16.986 1.00 50.31 ATOM 56 CD LYS D 427 57.225 30.864 16.065 1.00 48.15 ATOM 57 CE LYS D 427 58.573 30.325 16.438 1.00 46.98 ATOM 58 NZ LYS D 427 59.612 30.847 15.518 1.00 47.22 ATOM 59 N GLU D 428 53.820 32.105 19.541 1.00 52.96 ATOM 60 CA GLU D 428 54.048 32.365 20.956 1.00 53.46 ATOM 61 C GLU D 428 52.947 31.869 21.890 1.00 54.18 ATOM 62 O GLU D 428 53.208 31.680 23.071 1.00 55.06 ATOM 63 CB GLU D 428 54.280 33.861 21.187 1.00 52.71 ATOM 64 CG GLU D 428 54.375 34.271 22.645 1.00 53.02 ATOM 65 CD GLU D 428 54.844 35.710 22.821 1.00 54.95 ATOM 66 OE1 GLU D 428 55.665 36.177 21.963 1.00 55.51 ATOM 67 OE2 GLU D 428 54.405 36.358 23.819 1.00 54.13 ATOM 68 N SER D 429 51.727 31.673 21.387 1.00 55.28 ATOM 69 CA SER D 429 50.580 31.332 22.249 1.00 56.68 ATOM 70 C SER D 429 50.730 29.969 22.926 1.00 57.37 ATOM 71 O SER D 429 50.149 29.729 23.999 1.00 58.09 ATOM 72 CB SER D 429 49.258 31.384 21.477 1.00 56.96 ATOM 73 OG SER D 429 49.086 32.647 20.853 1.00 58.57 ATOM 74 N ILE D 430 51.514 29.090 22.299 1.00 57.05 ATOM 75 CA ILE D 430 51.766 27.729 22.811 1.00 56.39 ATOM 76 C ILE D 430 52.688 27.648 24.045 1.00 55.15 ATOM 77 O ILE D 430 52.665 26.636 24.759 1.00 54.05 ATOM 78 CB ILE D 430 52.419 26.817 21.736 1.00 56.61 ATOM 79 CG1 ILE D 430 51.817 27.034 20.364 1.00 57.80 ATOM 80 CG2 ILE D 430 52.249 25.352 22.100 1.00 58.49 ATOM 81 CD1 ILE D 430 52.707 26.463 19.329 1.00 58.24 ATOM 82 N LYS D 431 53.527 28.669 24.265 1.00 53.45 ATOM 83 CA LYS D 431 54.492 28.649 25.360 1.00 52.07 ATOM 84 C LYS D 431 55.270 27.307 25.352 1.00 49.81 ATOM 85 O LYS D 431 55.426 26.643 26.379 1.00 49.85 ATOM 86 CB LYS D 431 53.786 28.921 26.714 1.00 53.04 ATOM 87 CG LYS D 431 54.706 29.237 27.939 1.00 53.76 ATOM 88 CD LYS D 431 53.880 29.384 29.248 1.00 53.54 ATOM 89 CE LYS D 431 54.720 29.201 30.546 1.00 57.34 ATOM 90 NZ LYS D 431 55.752 30.281 30.857 1.00 57.77 ATOM 91 N CYS D 432 55.735 26.915 24.172 1.00 47.28 ATOM 92 CA CYS D 432 56.647 25.783 24.024 1.00 45.06 ATOM 93 C CYS D 432 58.055 26.088 24.553 1.00 43.15 ATOM 94 O CYS D 432 58.651 27.119 24.166 1.00 43.51 ATOM 95 CB CYS D 432 56.747 25.429 22.556 1.00 45.60 ATOM 96 SG CYS D 432 57.090 23.712 22.274 1.00 47.03 ATOM 97 N PRO D 433 58.606 25.199 25.421 1.00 40.50 ATOM 98 CA PRO D 433 59.977 25.301 25.947 1.00 38.27 ATOM 99 C PRO D 433 61.030 25.162 24.840 1.00 38.17 ATOM 100 O PRO D 433 62.153 25.675 24.984 1.00 39.18 ATOM 101 CB PRO D 433 60.095 24.115 26.897 1.00 38.04 ATOM 102 CG PRO D 433 58.732 23.660 27.146 1.00 38.27 ATOM 103 CD PRO D 433 57.924 24.006 25.935 1.00 40.00 ATOM 104 N CYS D 434 60.687 24.473 23.755 1.00 36.04 ATOM 105 CA CYS D 434 61.576 24.351 22.617 1.00 36.40 ATOM 106 C CYS D 434 60.917 24.928 21.353 1.00 36.88 ATOM 107 O CYS D 434 59.718 25.258 21.350 1.00 35.19 ATOM 108 CB CYS D 434 61.943 22.870 22.405 1.00 37.91 ATOM 109 SG CYS D 434 60.582 21.902 21.713 1.00 37.75 ATOM 110 N GLU D 435 61.692 25.045 20.273 1.00 37.28 ATOM 111 CA GLU D 435 61.156 25.569 19.032 1.00 38.44 ATOM 112 C GLU D 435 59.908 24.759 18.649 1.00 40.38 ATOM 113 O GLU D 435 59.979 23.537 18.582 1.00 42.02 ATOM 114 CB GLU D 435 62.184 25.456 17.944 1.00 37.46 ATOM 115 CG GLU D 435 61.708 26.028 16.645 1.00 41.25 ATOM 116 CD GLU D 435 61.771 27.534 16.627 1.00 43.31 ATOM 117 OE1 GLU D 435 62.744 28.139 17.128 1.00 44.80 ATOM 118 OE2 GLU D 435 60.827 28.129 16.103 1.00 48.42 ATOM 119 N PRO D 436 58.746 25.422 18.446 1.00 41.08 ATOM 120 CA PRO D 436 57.546 24.670 18.058 1.00 41.01 ATOM 121 C PRO D 436 57.631 24.052 16.661 1.00 41.89 ATOM 122 O PRO D 436 58.450 24.464 15.830 1.00 40.50 ATOM 123 CB PRO D 436 56.440 25.738 18.069 1.00 40.54 ATOM 124 CG PRO D 436 56.978 26.854 18.872 1.00 41.05 ATOM 125 CD PRO D 436 58.450 26.860 18.583 1.00 40.61 ATOM 126 N GLU D 437 56.788 23.061 16.414 1.00 43.48 ATOM 127 CA GLU D 437 56.626 22.573 15.072 1.00 46.49 ATOM 128 C GLU D 437 55.641 23.435 14.234 1.00 49.06 ATOM 129 O GLU D 437 54.540 23.750 14.680 1.00 47.99 ATOM 130 CB GLU D 437 56.200 21.118 15.097 1.00 45.95 ATOM 131 CG GLU D 437 55.930 20.603 13.718 1.00 45.32 ATOM 132 CD GLU D 437 55.148 19.338 13.720 1.00 46.64 ATOM 133 OE1 GLU D 437 54.949 18.821 12.604 1.00 48.40 ATOM 134 OE2 GLU D 437 54.749 18.849 14.809 1.00 46.66 ATOM 135 N ARG D 438 56.051 23.805 13.024 1.00 52.76 ATOM 136 CA ARG D 438 55.175 24.541 12.127 1.00 57.48 ATOM 137 C ARG D 438 54.563 23.644 11.049 1.00 59.42 ATOM 138 O ARG D 438 55.271 23.047 10.264 1.00 58.66 ATOM 139 CB ARG D 438 55.920 25.689 11.466 1.00 58.36 ATOM 140 CG ARG D 438 54.981 26.680 10.808 1.00 62.85 ATOM 141 CD ARG D 438 55.424 26.981 9.407 1.00 68.05 ATOM 142 NE ARG D 438 56.593 27.853 9.389 1.00 72.84 ATOM 143 CZ ARG D 438 57.532 27.832 8.444 1.00 75.58 ATOM 144 NH1 ARG D 438 57.459 26.959 7.437 1.00 76.22 ATOM 145 NH2 ARG D 438 58.564 28.675 8.517 1.00 76.97 ATOM 146 N ILE D 439 53.240 23.566 11.027 1.00 63.12 ATOM 147 CA ILE D 439 52.501 22.845 10.001 1.00 66.30 ATOM 148 C ILE D 439 51.810 23.863 9.113 1.00 69.88 ATOM 149 O ILE D 439 51.030 24.667 9.614 1.00 69.64 ATOM 150 CB ILE D 439 51.447 21.957 10.646 1.00 65.84 ATOM 151 CG1 ILE D 439 52.113 21.106 11.724 1.00 65.21 ATOM 152 CG2 ILE D 439 50.727 21.114 9.583 1.00 65.27 ATOM 153 CD1 ILE D 439 51.159 20.344 12.571 1.00 66.28 ATOM 154 N SER D 440 52.095 23.835 7.808 1.00 74.73 ATOM 155 CA SER D 440 51.518 24.819 6.858 1.00 79.43 ATOM 156 C SER D 440 51.024 24.214 5.534 1.00 82.54 ATOM 157 O SER D 440 51.777 23.520 4.843 1.00 83.30 ATOM 158 CB SER D 440 52.495 25.967 6.593 1.00 79.44 ATOM 159 OG SER D 440 53.801 25.486 6.338 1.00 79.67 ATOM 160 N GLU D 441 49.767 24.514 5.182 1.00 85.92 ATOM 161 CA GLU D 441 49.013 23.768 4.143 1.00 88.88 ATOM 162 C GLU D 441 48.832 24.457 2.774 1.00 90.75 ATOM 163 O GLU D 441 49.347 23.957 1.760 1.00 91.14 ATOM 164 CB GLU D 441 47.592 23.469 4.624 1.00 88.76 ATOM 165 CG GLU D 441 47.318 21.994 4.872 1.00 89.16 ATOM 166 CD GLU D 441 47.918 21.502 6.174 1.00 90.00 ATOM 167 OE1 GLU D 441 48.656 22.277 6.819 1.00 90.00 ATOM 168 OE2 GLU D 441 47.652 20.341 6.550 1.00 90.00 ATOM 169 N SER D 442 48.104 25.579 2.742 1.00 92.42 ATOM 170 CA SER D 442 48.010 26.405 1.529 1.00 93.57 ATOM 171 C SER D 442 49.192 27.372 1.506 1.00 94.36 ATOM 172 O SER D 442 50.121 27.232 0.698 1.00 94.50 ATOM 173 CB SER D 442 46.697 27.203 1.485 1.00 93.65 ATOM 174 OG SER D 442 45.595 26.443 1.942 1.00 93.75 ATOM 175 N THR D 443 49.124 28.358 2.404 1.00 95.07 ATOM 176 CA THR D 443 50.187 29.361 2.656 1.00 95.23 ATOM 177 C THR D 443 50.027 29.890 4.098 1.00 94.21 ATOM 178 O THR D 443 50.601 30.923 4.484 1.00 94.19 ATOM 179 CB THR D 443 50.137 30.499 1.635 1.00 95.77 ATOM 180 OG1 THR D 443 50.319 29.970 0.316 1.00 90.00 ATOM 181 CG2 THR D 443 51.236 31.514 1.914 1.00 90.00 ATOM 182 N CYS D 444 49.236 29.148 4.879 1.00 92.75 ATOM 183 CA CYS D 444 48.891 29.518 6.255 1.00 90.89 ATOM 184 C CYS D 444 49.326 28.486 7.314 1.00 87.88 ATOM 185 O CYS D 444 49.067 27.273 7.205 1.00 87.19 ATOM 186 CB CYS D 444 47.394 29.851 6.384 1.00 91.87 ATOM 187 SG CYS D 444 46.301 28.418 6.246 1.00 94.69 ATOM 188 N ASN D 445 49.959 29.016 8.357 1.00 84.07 ATOM 189 CA ASN D 445 50.672 28.229 9.335 1.00 80.23 ATOM 190 C ASN D 445 49.855 27.891 10.580 1.00 76.51 ATOM 191 O ASN D 445 48.907 28.598 10.929 1.00 76.12 ATOM 192 CB ASN D 445 51.968 28.953 9.730 1.00 81.16 ATOM 193 CG ASN D 445 52.856 29.295 8.531 1.00 82.11 ATOM 194 OD1 ASN D 445 52.565 28.937 7.381 1.00 83.53 ATOM 195 ND2 ASN D 445 53.952 29.997 8.804 1.00 82.03 ATOM 196 N PHE D 446 50.241 26.784 11.217 1.00 72.04 ATOM 197 CA PHE D 446 49.779 26.371 12.541 1.00 67.74 ATOM 198 C PHE D 446 51.003 25.923 13.335 1.00 62.14 ATOM 199 O PHE D 446 51.997 25.462 12.778 1.00 60.62 ATOM 200 CB PHE D 446 48.773 25.221 12.443 1.00 70.71 ATOM 201 CG PHE D 446 47.497 25.574 11.714 1.00 74.89 ATOM 202 CD1 PHE D 446 47.486 25.734 10.308 1.00 77.29 ATOM 203 CD2 PHE D 446 46.294 25.730 12.426 1.00 77.16 ATOM 204 CE1 PHE D 446 46.296 26.065 9.614 1.00 78.16 ATOM 205 CE2 PHE D 446 45.093 26.051 11.761 1.00 78.12 ATOM 206 CZ PHE D 446 45.091 26.213 10.345 1.00 77.46 ATOM 207 N TYR D 447 50.956 26.075 14.641 1.00 56.76 ATOM 208 CA TYR D 447 52.100 25.686 15.430 1.00 51.93 ATOM 209 C TYR D 447 51.660 24.747 16.490 1.00 49.51 ATOM 210 O TYR D 447 50.618 24.921 17.078 1.00 47.52 ATOM 211 CB TYR D 447 52.823 26.891 16.026 1.00 50.83 ATOM 212 CG TYR D 447 53.380 27.845 15.002 1.00 49.75 ATOM 213 CD1 TYR D 447 52.563 28.834 14.435 1.00 50.89 ATOM 214 CD2 TYR D 447 54.719 27.773 14.589 1.00 47.87 ATOM 215 CE1 TYR D 447 53.060 29.738 13.483 1.00 49.88 ATOM 216 CE2 TYR D 447 55.236 28.669 13.637 1.00 48.39 ATOM 217 CZ TYR D 447 54.386 29.651 13.082 1.00 52.00 ATOM 218 OH TYR D 447 54.831 30.558 12.125 1.00 52.52 ATOM 219 N VAL D 448 52.461 23.718 16.708 1.00 49.53 ATOM 220 CA VAL D 448 52.208 22.761 17.789 1.00 48.98 ATOM 221 C VAL D 448 53.495 22.524 18.570 1.00 47.41 ATOM 222 O VAL D 448 54.588 22.727 18.045 1.00 47.35 ATOM 223 CB VAL D 448 51.551 21.454 17.240 1.00 49.52 ATOM 224 CG1 VAL D 448 52.442 20.199 17.387 1.00 47.56 ATOM 225 CG2 VAL D 448 50.198 21.260 17.888 1.00 52.34 ATOM 226 N CYS D 449 53.350 22.093 19.812 1.00 46.52 ATOM 227 CA CYS D 449 54.467 21.926 20.726 1.00 45.67 ATOM 228 C CYS D 449 54.677 20.456 21.030 1.00 45.05 ATOM 229 O CYS D 449 53.771 19.804 21.549 1.00 44.62 ATOM 230 CB CYS D 449 54.159 22.645 22.040 1.00 45.46 ATOM 231 SG CYS D 449 55.512 22.703 23.212 1.00 48.62 ATOM 232 N ASN D 450 55.874 19.945 20.735 1.00 43.45 ATOM 233 CA ASN D 450 56.212 18.552 21.044 1.00 42.94 ATOM 234 C ASN D 450 57.121 18.416 22.270 1.00 43.05 ATOM 235 O ASN D 450 57.734 17.392 22.468 1.00 43.72 ATOM 236 CB ASN D 450 56.845 17.866 19.824 1.00 41.87 ATOM 237 CG ASN D 450 55.931 17.879 18.599 1.00 43.38 ATOM 238 OD1 ASN D 450 54.849 17.265 18.596 1.00 40.82 ATOM 239 ND2 ASN D 450 56.363 18.582 17.547 1.00 41.37 ATOM 240 N CYS D 451 57.209 19.453 23.084 1.00 43.91 ATOM 241 CA CYS D 451 58.074 19.444 24.249 1.00 46.34 ATOM 242 C CYS D 451 57.228 19.752 25.475 1.00 48.56 ATOM 243 O CYS D 451 57.021 20.913 25.808 1.00 50.10 ATOM 244 CB CYS D 451 59.154 20.513 24.094 1.00 45.67 ATOM 245 SG CYS D 451 60.388 20.166 22.819 1.00 46.50 ATOM 246 N VAL D 452 56.728 18.725 26.141 1.00 50.29 ATOM 247 CA VAL D 452 55.716 18.919 27.166 1.00 52.60 ATOM 248 C VAL D 452 56.362 19.324 28.499 1.00 55.70 ATOM 249 O VAL D 452 57.338 18.742 28.936 1.00 54.99 ATOM 250 CB VAL D 452 54.824 17.651 27.310 1.00 52.24 ATOM 251 CG1 VAL D 452 53.941 17.717 28.586 1.00 50.11 ATOM 252 CG2 VAL D 452 53.998 17.406 26.017 1.00 48.70 ATOM 253 N GLU D 453 55.815 20.345 29.136 1.00 60.14 ATOM 254 CA GLU D 453 56.382 20.813 30.391 1.00 64.59 ATOM 255 C GLU D 453 55.559 20.283 31.573 1.00 66.90 ATOM 256 O GLU D 453 54.557 20.881 31.943 1.00 67.59 ATOM 257 CB GLU D 453 56.465 22.345 30.394 1.00 64.07 ATOM 258 CG GLU D 453 57.366 22.926 31.482 1.00 66.01 ATOM 259 CD GLU D 453 57.546 24.447 31.371 1.00 66.06 ATOM 260 OE1 GLU D 453 58.381 24.986 32.133 1.00 66.45 ATOM 261 OE2 GLU D 453 56.875 25.105 30.524 1.00 68.85 ATOM 262 N LYS D 454 55.971 19.148 32.145 1.00 69.90 ATOM 263 CA LYS D 454 55.296 18.581 33.317 1.00 71.98 ATOM 264 C LYS D 454 55.784 19.272 34.599 1.00 72.60 ATOM 265 O LYS D 454 55.530 20.468 34.825 1.00 72.69 ATOM 266 CB LYS D 454 55.527 17.068 33.397 1.00 73.92 ATOM 267 CG LYS D 454 54.511 16.321 34.261 1.00 76.50 ATOM 268 CD LYS D 454 54.909 16.326 35.755 1.00 79.00 ATOM 269 CE LYS D 454 53.805 15.730 36.655 1.00 78.33 ATOM 270 NZ LYS D 454 54.352 15.358 37.993 1.00 79.17 TER