HEADER RIBOSOMAL PROTEIN/RNA 29-SEP-08 3EP2 TITLE Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state TITLE 2 revealed by cryo-EM COMPND MOL_ID: 1; COMPND 2 MOLECULE: Elongation factor Tu; COMPND 3 CHAIN: X; EXPDTA ELECTRON MICROSCOPY DBREF 3EP2 X 1 393 UNP P0A6N1 EFTU_ECOLI 2 394 SEQRES 1 X 202 SER LYS GLU LYS PHE GLU ARG THR LYS PRO HIS VAL ASN SEQRES 2 X 202 VAL GLY THR ILE GLY HIS VAL ASP HIS GLY LYS THR THR SEQRES 3 X 202 LEU THR ALA ALA ILE THR THR VAL LEU ALA LYS THR TYR SEQRES 4 X 202 GLY GLY ALA ALA ARG ALA PHE ASP GLN ILE ASP ASN ALA SEQRES 5 X 202 PRO GLU GLU LYS ALA ARG GLY ILE THR ILE ASN THR SER SEQRES 6 X 202 HIS VAL GLU TYR ASP THR PRO THR ARG HIS TYR ALA HIS SEQRES 7 X 202 VAL ASP CYS PRO GLY HIS ALA ASP TYR VAL LYS ASN MET SEQRES 8 X 202 ILE THR GLY ALA ALA GLN MET ASP GLY ALA ILE LEU VAL SEQRES 9 X 202 VAL ALA ALA THR ASP GLY PRO MET PRO GLN THR ARG GLU SEQRES 10 X 202 HIS ILE LEU LEU GLY ARG GLN VAL GLY VAL PRO TYR ILE SEQRES 11 X 202 ILE VAL PHE LEU ASN LYS CYS ASP MET VAL ASP ASP GLU SEQRES 12 X 202 GLU LEU LEU GLU LEU VAL GLU MET GLU VAL ARG GLU LEU SEQRES 13 X 202 LEU SER GLN TYR ASP PHE PRO GLY ASP ASP THR PRO ILE SEQRES 14 X 202 VAL ARG GLY SER ALA LEU LYS ALA LEU GLU GLY ASP ALA SEQRES 15 X 202 GLU TRP GLU ALA LYS ILE LEU GLU LEU ALA GLY PHE LEU SEQRES 16 X 202 ASP SER TYR ILE PRO GLU PRO ATOM 1 CA SER X 1 -14.367 77.245 -49.473 1.00 15.00 ATOM 2 CA LYS X 2 -13.033 80.552 -50.795 1.00 15.00 ATOM 3 CA GLU X 3 -12.545 80.040 -54.512 1.00 15.00 ATOM 4 CA LYS X 4 -15.611 81.178 -56.414 1.00 15.00 ATOM 5 CA PHE X 5 -16.646 79.101 -59.379 1.00 15.00 ATOM 6 CA GLU X 6 -17.950 81.585 -61.911 1.00 15.00 ATOM 7 CA ARG X 7 -20.505 80.456 -64.433 1.00 15.00 ATOM 8 CA THR X 8 -19.611 80.015 -68.150 1.00 15.00 ATOM 9 CA LYS X 9 -20.887 77.489 -70.718 1.00 15.00 ATOM 10 CA PRO X 10 -23.785 75.128 -70.039 1.00 15.00 ATOM 11 CA HIS X 11 -23.110 72.526 -67.350 1.00 15.00 ATOM 12 CA VAL X 12 -23.306 69.005 -68.578 1.00 15.00 ATOM 13 CA ASN X 13 -22.611 66.182 -66.130 1.00 15.00 ATOM 14 CA VAL X 14 -21.510 62.857 -67.536 1.00 15.00 ATOM 15 CA GLY X 15 -19.656 59.669 -66.605 1.00 15.00 ATOM 16 CA THR X 16 -18.135 56.249 -67.251 1.00 15.00 ATOM 17 CA ILE X 17 -19.856 52.842 -67.273 1.00 15.00 ATOM 18 CA GLY X 18 -18.968 49.521 -68.824 1.00 15.00 ATOM 19 CA HIS X 19 -17.611 46.097 -68.013 1.00 15.00 ATOM 20 CA VAL X 20 -15.015 45.601 -65.315 1.00 15.00 ATOM 21 CA ASP X 21 -11.236 45.751 -65.467 1.00 15.00 ATOM 22 CA HIS X 22 -11.135 47.597 -68.754 1.00 15.00 ATOM 23 CA GLY X 23 -10.869 51.377 -68.841 1.00 15.00 ATOM 24 CA LYS X 24 -13.482 53.337 -66.896 1.00 15.00 ATOM 25 CA THR X 25 -11.595 54.437 -63.805 1.00 15.00 ATOM 26 CA THR X 26 -8.301 55.115 -65.560 1.00 15.00 ATOM 27 CA LEU X 27 -9.850 56.804 -68.568 1.00 15.00 ATOM 28 CA THR X 28 -11.379 59.239 -66.075 1.00 15.00 ATOM 29 CA ALA X 29 -8.006 60.301 -64.688 1.00 15.00 ATOM 30 CA ALA X 30 -6.725 60.560 -68.254 1.00 15.00 ATOM 31 CA ILE X 31 -9.443 62.993 -69.394 1.00 15.00 ATOM 32 CA THR X 32 -8.794 65.057 -66.270 1.00 15.00 ATOM 33 CA THR X 33 -4.998 65.124 -66.744 1.00 15.00 ATOM 34 CA VAL X 34 -5.041 65.430 -70.512 1.00 15.00 ATOM 35 CA LEU X 35 -7.449 68.331 -70.496 1.00 15.00 ATOM 36 CA ALA X 36 -5.521 69.898 -67.609 1.00 15.00 ATOM 37 CA LYS X 37 -3.315 71.186 -70.401 1.00 15.00 ATOM 38 CA THR X 38 -4.976 70.921 -73.784 1.00 15.00 ATOM 39 CA TYR X 39 -7.495 73.374 -72.167 1.00 15.00 ATOM 40 CA GLY X 40 -5.681 74.011 -68.862 1.00 15.00 ATOM 41 CA GLY X 41 -7.966 72.788 -66.078 1.00 15.00 ATOM 42 CA ALA X 42 -6.610 70.960 -62.998 1.00 15.00 ATOM 43 CA ALA X 43 -6.133 67.175 -63.041 1.00 15.00 ATOM 44 CA ARG X 44 -6.013 64.216 -60.648 1.00 15.00 ATOM 45 CA ALA X 45 -4.741 60.624 -60.750 1.00 15.00 ATOM 46 CA PHE X 46 -5.861 57.053 -60.208 1.00 15.00 ATOM 47 CA ASP X 47 -4.541 57.125 -56.649 1.00 15.00 ATOM 48 CA GLN X 48 -6.975 60.013 -56.236 1.00 15.00 ATOM 49 CA ILE X 49 -10.008 58.626 -58.060 1.00 15.00 ATOM 50 CA ASP X 50 -10.057 55.179 -56.441 1.00 15.00 ATOM 51 CA ASN X 51 -8.952 56.876 -53.187 1.00 15.00 ATOM 52 CA ALA X 52 -10.668 54.260 -51.038 1.00 15.00 ATOM 53 CA PRO X 53 -8.294 51.692 -49.516 1.00 15.00 ATOM 54 CA GLU X 54 -10.441 48.674 -50.307 1.00 15.00 ATOM 55 CA GLU X 55 -10.375 49.858 -53.916 1.00 15.00 ATOM 56 CA LYS X 56 -6.607 50.065 -53.668 1.00 15.00 ATOM 57 CA ALA X 57 -6.025 46.601 -52.260 1.00 15.00 ATOM 58 CA ARG X 58 -8.791 44.957 -54.271 1.00 15.00 ATOM 59 CA GLY X 59 -8.015 47.088 -57.314 1.00 15.00 ATOM 60 CA ILE X 60 -11.588 47.437 -58.449 1.00 15.00 ATOM 61 CA THR X 61 -13.618 50.606 -57.702 1.00 15.00 ATOM 62 CA ILE X 62 -16.535 50.107 -55.322 1.00 15.00 ATOM 63 CA ASN X 63 -18.311 53.450 -55.001 1.00 15.00 ATOM 64 CA THR X 64 -18.732 56.068 -57.678 1.00 15.00 ATOM 65 CA SER X 65 -16.577 59.160 -57.235 1.00 15.00 ATOM 66 CA HIS X 66 -17.071 62.597 -58.745 1.00 15.00 ATOM 67 CA VAL X 67 -14.519 64.430 -60.816 1.00 15.00 ATOM 68 CA GLU X 68 -14.519 67.635 -62.836 1.00 15.00 ATOM 69 CA TYR X 69 -12.921 68.947 -65.996 1.00 15.00 ATOM 70 CA ASP X 70 -13.457 71.777 -68.519 1.00 15.00 ATOM 71 CA THR X 71 -13.917 71.717 -72.317 1.00 15.00 ATOM 72 CA PRO X 72 -14.161 75.065 -74.138 1.00 15.00 ATOM 73 CA THR X 73 -17.872 75.133 -74.850 1.00 15.00 ATOM 74 CA ARG X 74 -19.236 73.143 -71.859 1.00 15.00 ATOM 75 CA HIS X 75 -18.667 72.265 -68.224 1.00 15.00 ATOM 76 CA TYR X 76 -18.304 68.698 -67.084 1.00 15.00 ATOM 77 CA ALA X 77 -19.228 66.828 -63.914 1.00 15.00 ATOM 78 CA HIS X 78 -17.850 63.325 -64.276 1.00 15.00 ATOM 79 CA VAL X 79 -18.858 60.286 -62.319 1.00 15.00 ATOM 80 CA ASP X 80 -16.856 57.071 -62.389 1.00 15.00 ATOM 81 CA CYS X 81 -18.961 53.953 -62.037 1.00 15.00 ATOM 82 CA PRO X 82 -17.919 50.521 -60.775 1.00 15.00 ATOM 83 CA GLY X 83 -18.219 47.720 -63.285 1.00 15.00 ATOM 84 CA HIS X 84 -18.205 44.939 -60.708 1.00 15.00 ATOM 85 CA ALA X 85 -21.476 43.051 -60.740 1.00 15.00 ATOM 86 CA ASP X 86 -21.789 43.338 -56.990 1.00 15.00 ATOM 87 CA TYR X 87 -22.142 47.084 -57.214 1.00 15.00 ATOM 88 CA VAL X 88 -24.549 47.788 -60.118 1.00 15.00 ATOM 89 CA LYS X 89 -26.893 49.173 -57.503 1.00 15.00 ATOM 90 CA ASN X 90 -24.182 51.713 -56.702 1.00 15.00 ATOM 91 CA MET X 91 -23.702 52.769 -60.334 1.00 15.00 ATOM 92 CA ILE X 92 -27.401 52.586 -61.148 1.00 15.00 ATOM 93 CA THR X 93 -27.889 55.631 -58.957 1.00 15.00 ATOM 94 CA GLY X 94 -24.904 57.397 -60.472 1.00 15.00 ATOM 95 CA ALA X 95 -26.011 56.823 -64.007 1.00 15.00 ATOM 96 CA ALA X 96 -29.653 57.601 -63.278 1.00 15.00 ATOM 97 CA GLN X 97 -28.674 61.293 -63.098 1.00 15.00 ATOM 98 CA MET X 98 -26.396 61.333 -66.159 1.00 15.00 ATOM 99 CA ASP X 99 -26.835 63.607 -69.170 1.00 15.00 ATOM 100 CA GLY X 100 -24.924 61.299 -71.464 1.00 15.00 ATOM 101 CA ALA X 101 -22.606 58.382 -70.816 1.00 15.00 ATOM 102 CA ILE X 102 -19.193 57.297 -72.036 1.00 15.00 ATOM 103 CA LEU X 103 -19.412 53.522 -72.377 1.00 15.00 ATOM 104 CA VAL X 104 -15.782 52.353 -72.158 1.00 15.00 ATOM 105 CA VAL X 105 -15.029 49.004 -73.841 1.00 15.00 ATOM 106 CA ALA X 106 -11.648 47.267 -74.200 1.00 15.00 ATOM 107 CA ALA X 107 -10.397 46.466 -77.692 1.00 15.00 ATOM 108 CA THR X 108 -8.962 43.158 -76.575 1.00 15.00 ATOM 109 CA ASP X 109 -11.943 41.350 -75.054 1.00 15.00 ATOM 110 CA GLY X 110 -14.874 43.291 -76.461 1.00 15.00 ATOM 111 CA PRO X 111 -18.501 42.964 -75.297 1.00 15.00 ATOM 112 CA MET X 112 -18.674 41.212 -71.925 1.00 15.00 ATOM 113 CA PRO X 113 -21.389 40.538 -69.331 1.00 15.00 ATOM 114 CA GLN X 114 -21.059 43.776 -67.376 1.00 15.00 ATOM 115 CA THR X 115 -21.134 45.640 -70.678 1.00 15.00 ATOM 116 CA ARG X 116 -24.552 44.386 -71.723 1.00 15.00 ATOM 117 CA GLU X 117 -25.881 44.827 -68.133 1.00 15.00 ATOM 118 CA HIS X 118 -24.811 48.487 -67.994 1.00 15.00 ATOM 119 CA ILE X 119 -26.065 49.410 -71.423 1.00 15.00 ATOM 120 CA LEU X 120 -29.427 47.859 -70.585 1.00 15.00 ATOM 121 CA LEU X 121 -29.494 49.484 -67.179 1.00 15.00 ATOM 122 CA GLY X 122 -28.593 52.651 -69.008 1.00 15.00 ATOM 123 CA ARG X 123 -31.393 52.500 -71.527 1.00 15.00 ATOM 124 CA GLN X 124 -33.640 51.594 -68.541 1.00 15.00 ATOM 125 CA VAL X 125 -32.738 54.508 -66.312 1.00 15.00 ATOM 126 CA GLY X 126 -32.783 57.958 -67.965 1.00 15.00 ATOM 127 CA VAL X 127 -29.506 58.444 -69.927 1.00 15.00 ATOM 128 CA PRO X 128 -30.134 59.749 -73.476 1.00 15.00 ATOM 129 CA TYR X 129 -26.721 59.408 -75.122 1.00 15.00 ATOM 130 CA ILE X 130 -23.835 56.959 -75.221 1.00 15.00 ATOM 131 CA ILE X 131 -20.387 57.528 -76.668 1.00 15.00 ATOM 132 CA VAL X 132 -18.454 54.246 -76.981 1.00 15.00 ATOM 133 CA PHE X 133 -14.727 54.341 -76.288 1.00 15.00 ATOM 134 CA LEU X 134 -12.595 51.386 -77.480 1.00 15.00 ATOM 135 CA ASN X 135 -9.836 51.144 -74.922 1.00 15.00 ATOM 136 CA LYS X 136 -6.494 49.392 -74.762 1.00 15.00 ATOM 137 CA CYS X 137 -5.900 49.958 -78.466 1.00 15.00 ATOM 138 CA ASP X 138 -2.272 49.938 -77.426 1.00 15.00 ATOM 139 CA MET X 139 -2.594 46.168 -77.111 1.00 15.00 ATOM 140 CA VAL X 140 -4.053 45.360 -80.465 1.00 15.00 ATOM 141 CA ASP X 141 -2.537 46.287 -83.787 1.00 15.00 ATOM 142 CA ASP X 142 -4.784 44.643 -86.327 1.00 15.00 ATOM 143 CA GLU X 143 -6.874 47.418 -87.869 1.00 15.00 ATOM 144 CA GLU X 144 -9.168 44.512 -88.759 1.00 15.00 ATOM 145 CA LEU X 145 -9.806 43.455 -85.161 1.00 15.00 ATOM 146 CA LEU X 146 -11.218 46.858 -84.243 1.00 15.00 ATOM 147 CA GLU X 147 -13.434 46.691 -87.352 1.00 15.00 ATOM 148 CA LEU X 148 -14.781 43.434 -85.974 1.00 15.00 ATOM 149 CA VAL X 149 -15.379 44.594 -82.380 1.00 15.00 ATOM 150 CA GLU X 150 -16.841 48.008 -83.200 1.00 15.00 ATOM 151 CA MET X 151 -19.100 46.274 -85.684 1.00 15.00 ATOM 152 CA GLU X 152 -20.283 44.237 -82.695 1.00 15.00 ATOM 153 CA VAL X 153 -20.500 46.958 -80.028 1.00 15.00 ATOM 154 CA ARG X 154 -22.875 48.779 -82.341 1.00 15.00 ATOM 155 CA GLU X 155 -25.060 45.763 -83.096 1.00 15.00 ATOM 156 CA LEU X 156 -25.226 45.468 -79.302 1.00 15.00 ATOM 157 CA LEU X 157 -26.249 49.027 -78.479 1.00 15.00 ATOM 158 CA SER X 158 -28.890 49.097 -81.223 1.00 15.00 ATOM 159 CA GLN X 159 -30.194 45.858 -79.706 1.00 15.00 ATOM 160 CA TYR X 160 -31.339 47.741 -76.595 1.00 15.00 ATOM 161 CA ASP X 161 -32.413 50.604 -78.852 1.00 15.00 ATOM 162 CA PHE X 162 -29.694 53.183 -79.086 1.00 15.00 ATOM 163 CA PRO X 163 -28.233 55.065 -82.017 1.00 15.00 ATOM 164 CA GLY X 164 -25.320 52.670 -82.422 1.00 15.00 ATOM 165 CA ASP X 165 -24.773 53.527 -86.043 1.00 15.00 ATOM 166 CA ASP X 166 -24.882 57.280 -85.598 1.00 15.00 ATOM 167 CA THR X 167 -22.991 56.460 -82.389 1.00 15.00 ATOM 168 CA PRO X 168 -19.542 58.041 -82.164 1.00 15.00 ATOM 169 CA ILE X 169 -16.612 55.808 -81.216 1.00 15.00 ATOM 170 CA VAL X 170 -13.186 57.052 -80.216 1.00 15.00 ATOM 171 CA ARG X 171 -10.162 54.717 -80.521 1.00 15.00 ATOM 172 CA GLY X 172 -7.520 55.209 -77.881 1.00 15.00 ATOM 173 CA SER X 173 -5.741 54.119 -74.729 1.00 15.00 ATOM 174 CA ALA X 174 -6.183 55.519 -71.256 1.00 15.00 ATOM 175 CA LEU X 175 -2.888 54.819 -69.444 1.00 15.00 ATOM 176 CA LYS X 176 -1.034 55.597 -72.638 1.00 15.00 ATOM 177 CA ALA X 177 -2.577 59.063 -72.673 1.00 15.00 ATOM 178 CA LEU X 178 -2.477 59.417 -68.895 1.00 15.00 ATOM 179 CA GLU X 179 1.209 58.632 -69.126 1.00 15.00 ATOM 180 CA GLY X 180 2.091 61.166 -71.805 1.00 15.00 ATOM 181 CA ASP X 181 2.440 59.644 -75.259 1.00 15.00 ATOM 182 CA ALA X 182 0.763 62.423 -77.196 1.00 15.00 ATOM 183 CA GLU X 183 -0.276 60.129 -80.060 1.00 15.00 ATOM 184 CA TRP X 184 -2.964 59.147 -77.565 1.00 15.00 ATOM 185 CA GLU X 185 -3.482 62.346 -75.599 1.00 15.00 ATOM 186 CA ALA X 186 -4.990 63.412 -78.902 1.00 15.00 ATOM 187 CA LYS X 187 -7.481 60.558 -78.757 1.00 15.00 ATOM 188 CA ILE X 188 -8.570 61.698 -75.307 1.00 15.00 ATOM 189 CA LEU X 189 -9.665 64.926 -76.976 1.00 15.00 ATOM 190 CA GLU X 190 -11.317 63.208 -79.952 1.00 15.00 ATOM 191 CA LEU X 191 -13.644 62.071 -77.151 1.00 15.00 ATOM 192 CA ALA X 192 -13.591 65.057 -74.911 1.00 15.00 ATOM 193 CA GLY X 193 -14.579 66.578 -78.234 1.00 15.00 ATOM 194 CA PHE X 194 -17.806 64.628 -78.691 1.00 15.00 ATOM 195 CA LEU X 195 -19.136 65.390 -75.212 1.00 15.00 ATOM 196 CA ASP X 196 -19.945 68.777 -76.753 1.00 15.00 ATOM 197 CA SER X 197 -20.408 67.843 -80.384 1.00 15.00 ATOM 198 CA TYR X 198 -22.813 65.167 -79.276 1.00 15.00 ATOM 199 CA ILE X 199 -24.375 66.239 -75.930 1.00 15.00 ATOM 200 CA PRO X 200 -26.517 68.205 -77.106 1.00 15.00 ATOM 201 CA GLU X 201 -27.213 71.038 -74.544 1.00 15.00 ATOM 202 CA PRO X 202 -29.374 70.061 -71.519 1.00 15.00 TER