HEADER RIBOSOMAL PROTEIN/RNA 30-SEP-08 3EQ3 TITLE Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state TITLE 2 revealed by cryo-EM COMPND MOL_ID: 1; COMPND 2 MOLECULE: Elongation factor Tu; COMPND 3 CHAIN: X; EXPDTA ELECTRON MICROSCOPY DBREF 3EQ3 X 1 393 UNP P0A6N1 EFTU_ECOLI 2 394 SEQRES 1 X 202 SER LYS GLU LYS PHE GLU ARG THR LYS PRO HIS VAL ASN SEQRES 2 X 202 VAL GLY THR ILE GLY HIS VAL ASP HIS GLY LYS THR THR SEQRES 3 X 202 LEU THR ALA ALA ILE THR THR VAL LEU ALA LYS THR TYR SEQRES 4 X 202 GLY GLY ALA ALA ARG ALA PHE ASP GLN ILE ASP ASN ALA SEQRES 5 X 202 PRO GLU GLU LYS ALA ARG GLY ILE THR ILE ASN THR SER SEQRES 6 X 202 HIS VAL GLU TYR ASP THR PRO THR ARG HIS TYR ALA HIS SEQRES 7 X 202 VAL ASP CYS PRO GLY HIS ALA ASP TYR VAL LYS ASN MET SEQRES 8 X 202 ILE THR GLY ALA ALA GLN MET ASP GLY ALA ILE LEU VAL SEQRES 9 X 202 VAL ALA ALA THR ASP GLY PRO MET PRO GLN THR ARG GLU SEQRES 10 X 202 HIS ILE LEU LEU GLY ARG GLN VAL GLY VAL PRO TYR ILE SEQRES 11 X 202 ILE VAL PHE LEU ASN LYS CYS ASP MET VAL ASP ASP GLU SEQRES 12 X 202 GLU LEU LEU GLU LEU VAL GLU MET GLU VAL ARG GLU LEU SEQRES 13 X 202 LEU SER GLN TYR ASP PHE PRO GLY ASP ASP THR PRO ILE SEQRES 14 X 202 VAL ARG GLY SER ALA LEU LYS ALA LEU GLU GLY ASP ALA SEQRES 15 X 202 GLU TRP GLU ALA LYS ILE LEU GLU LEU ALA GLY PHE LEU SEQRES 16 X 202 ASP SER TYR ILE PRO GLU PRO ATOM 1 CA SER X 1 -12.294 73.788 -44.041 1.00 15.00 ATOM 2 CA LYS X 2 -11.101 77.209 -45.197 1.00 15.00 ATOM 3 CA GLU X 3 -11.021 77.037 -48.975 1.00 15.00 ATOM 4 CA LYS X 4 -14.272 78.320 -50.423 1.00 15.00 ATOM 5 CA PHE X 5 -15.629 76.511 -53.433 1.00 15.00 ATOM 6 CA GLU X 6 -17.193 79.203 -55.575 1.00 15.00 ATOM 7 CA ARG X 7 -20.010 78.287 -57.896 1.00 15.00 ATOM 8 CA THR X 8 -19.526 78.188 -61.713 1.00 15.00 ATOM 9 CA LYS X 9 -21.080 75.895 -64.345 1.00 15.00 ATOM 10 CA PRO X 10 -23.895 73.463 -63.571 1.00 15.00 ATOM 11 CA HIS X 11 -22.939 70.635 -61.217 1.00 15.00 ATOM 12 CA VAL X 12 -23.277 67.237 -62.729 1.00 15.00 ATOM 13 CA ASN X 13 -22.330 64.210 -60.633 1.00 15.00 ATOM 14 CA VAL X 14 -21.397 61.033 -62.444 1.00 15.00 ATOM 15 CA GLY X 15 -19.462 57.786 -62.011 1.00 15.00 ATOM 16 CA THR X 16 -18.031 54.449 -63.124 1.00 15.00 ATOM 17 CA ILE X 17 -19.754 51.046 -63.266 1.00 15.00 ATOM 18 CA GLY X 18 -19.049 47.884 -65.197 1.00 15.00 ATOM 19 CA HIS X 19 -17.623 44.410 -64.850 1.00 15.00 ATOM 20 CA VAL X 20 -14.750 43.691 -62.504 1.00 15.00 ATOM 21 CA ASP X 21 -11.010 43.880 -63.052 1.00 15.00 ATOM 22 CA HIS X 22 -11.261 46.014 -66.150 1.00 15.00 ATOM 23 CA GLY X 23 -10.994 49.790 -65.924 1.00 15.00 ATOM 24 CA LYS X 24 -13.375 51.549 -63.539 1.00 15.00 ATOM 25 CA THR X 25 -11.160 52.380 -60.584 1.00 15.00 ATOM 26 CA THR X 26 -8.075 53.235 -62.617 1.00 15.00 ATOM 27 CA LEU X 27 -9.936 55.176 -65.275 1.00 15.00 ATOM 28 CA THR X 28 -11.178 57.367 -62.423 1.00 15.00 ATOM 29 CA ALA X 29 -7.671 58.324 -61.319 1.00 15.00 ATOM 30 CA ALA X 30 -6.785 58.911 -64.964 1.00 15.00 ATOM 31 CA ILE X 31 -9.602 61.417 -65.580 1.00 15.00 ATOM 32 CA THR X 32 -8.612 63.197 -62.371 1.00 15.00 ATOM 33 CA THR X 33 -4.890 63.333 -63.246 1.00 15.00 ATOM 34 CA VAL X 34 -5.341 63.976 -66.944 1.00 15.00 ATOM 35 CA LEU X 35 -7.725 66.846 -66.406 1.00 15.00 ATOM 36 CA ALA X 36 -5.490 68.161 -63.616 1.00 15.00 ATOM 37 CA LYS X 37 -3.597 69.709 -66.503 1.00 15.00 ATOM 38 CA THR X 38 -5.615 69.738 -69.696 1.00 15.00 ATOM 39 CA TYR X 39 -7.936 72.019 -67.600 1.00 15.00 ATOM 40 CA GLY X 40 -5.773 72.369 -64.468 1.00 15.00 ATOM 41 CA GLY X 41 -7.746 70.885 -61.574 1.00 15.00 ATOM 42 CA ALA X 42 -6.069 68.797 -58.838 1.00 15.00 ATOM 43 CA ALA X 43 -5.611 65.035 -59.272 1.00 15.00 ATOM 44 CA ARG X 44 -5.240 61.873 -57.183 1.00 15.00 ATOM 45 CA ALA X 45 -3.997 58.313 -57.745 1.00 15.00 ATOM 46 CA PHE X 46 -5.062 54.701 -57.409 1.00 15.00 ATOM 47 CA ASP X 47 -3.363 54.461 -54.022 1.00 15.00 ATOM 48 CA GLN X 48 -5.730 57.285 -53.089 1.00 15.00 ATOM 49 CA ILE X 49 -8.947 56.046 -54.690 1.00 15.00 ATOM 50 CA ASP X 50 -8.830 52.467 -53.394 1.00 15.00 ATOM 51 CA ASN X 51 -7.373 53.873 -50.139 1.00 15.00 ATOM 52 CA ALA X 52 -8.854 51.062 -48.060 1.00 15.00 ATOM 53 CA PRO X 53 -6.336 48.384 -47.043 1.00 15.00 ATOM 54 CA GLU X 54 -8.565 45.435 -47.865 1.00 15.00 ATOM 55 CA GLU X 55 -8.887 46.939 -51.338 1.00 15.00 ATOM 56 CA LYS X 56 -5.114 47.148 -51.482 1.00 15.00 ATOM 57 CA ALA X 57 -4.394 43.576 -50.463 1.00 15.00 ATOM 58 CA ARG X 58 -7.366 42.101 -52.303 1.00 15.00 ATOM 59 CA GLY X 59 -6.919 44.502 -55.207 1.00 15.00 ATOM 60 CA ILE X 60 -10.593 44.927 -55.913 1.00 15.00 ATOM 61 CA THR X 61 -12.520 48.001 -54.668 1.00 15.00 ATOM 62 CA ILE X 62 -15.163 47.271 -52.040 1.00 15.00 ATOM 63 CA ASN X 63 -16.884 50.559 -51.229 1.00 15.00 ATOM 64 CA THR X 64 -17.585 53.404 -53.598 1.00 15.00 ATOM 65 CA SER X 65 -15.387 56.459 -53.114 1.00 15.00 ATOM 66 CA HIS X 66 -16.031 60.014 -54.246 1.00 15.00 ATOM 67 CA VAL X 67 -13.713 62.043 -56.408 1.00 15.00 ATOM 68 CA GLU X 68 -13.924 65.416 -58.119 1.00 15.00 ATOM 69 CA TYR X 69 -12.674 67.018 -61.303 1.00 15.00 ATOM 70 CA ASP X 70 -13.472 70.059 -63.487 1.00 15.00 ATOM 71 CA THR X 71 -14.342 70.339 -67.203 1.00 15.00 ATOM 72 CA PRO X 72 -14.773 73.835 -68.677 1.00 15.00 ATOM 73 CA THR X 73 -18.539 73.940 -68.975 1.00 15.00 ATOM 74 CA ARG X 74 -19.576 71.680 -66.044 1.00 15.00 ATOM 75 CA HIS X 75 -18.618 70.483 -62.587 1.00 15.00 ATOM 76 CA TYR X 76 -18.144 66.831 -61.819 1.00 15.00 ATOM 77 CA ALA X 77 -18.724 64.678 -58.749 1.00 15.00 ATOM 78 CA HIS X 78 -17.403 61.230 -59.572 1.00 15.00 ATOM 79 CA VAL X 79 -18.201 58.021 -57.799 1.00 15.00 ATOM 80 CA ASP X 80 -16.229 54.839 -58.375 1.00 15.00 ATOM 81 CA CYS X 81 -18.292 51.688 -58.079 1.00 15.00 ATOM 82 CA PRO X 82 -17.130 48.163 -57.252 1.00 15.00 ATOM 83 CA GLY X 83 -17.709 45.598 -59.956 1.00 15.00 ATOM 84 CA HIS X 84 -17.423 42.597 -57.657 1.00 15.00 ATOM 85 CA ALA X 85 -20.684 40.696 -57.505 1.00 15.00 ATOM 86 CA ASP X 86 -20.587 40.644 -53.731 1.00 15.00 ATOM 87 CA TYR X 87 -20.952 44.391 -53.578 1.00 15.00 ATOM 88 CA VAL X 88 -23.657 45.337 -56.130 1.00 15.00 ATOM 89 CA LYS X 89 -25.699 46.466 -53.162 1.00 15.00 ATOM 90 CA ASN X 90 -22.910 48.942 -52.433 1.00 15.00 ATOM 91 CA MET X 91 -22.825 50.323 -55.986 1.00 15.00 ATOM 92 CA ILE X 92 -26.591 50.189 -56.408 1.00 15.00 ATOM 93 CA THR X 93 -26.828 53.021 -53.912 1.00 15.00 ATOM 94 CA GLY X 94 -24.021 54.936 -55.576 1.00 15.00 ATOM 95 CA ALA X 95 -25.506 54.675 -59.007 1.00 15.00 ATOM 96 CA ALA X 96 -29.045 55.359 -57.820 1.00 15.00 ATOM 97 CA GLN X 97 -28.042 59.026 -57.415 1.00 15.00 ATOM 98 CA MET X 98 -26.110 59.357 -60.689 1.00 15.00 ATOM 99 CA ASP X 99 -26.867 61.890 -63.418 1.00 15.00 ATOM 100 CA GLY X 100 -25.222 59.810 -66.104 1.00 15.00 ATOM 101 CA ALA X 101 -22.857 56.863 -65.976 1.00 15.00 ATOM 102 CA ILE X 102 -19.599 55.916 -67.652 1.00 15.00 ATOM 103 CA LEU X 103 -19.864 52.184 -68.306 1.00 15.00 ATOM 104 CA VAL X 104 -16.236 51.025 -68.587 1.00 15.00 ATOM 105 CA VAL X 105 -15.680 47.846 -70.637 1.00 15.00 ATOM 106 CA ALA X 106 -12.363 46.172 -71.516 1.00 15.00 ATOM 107 CA ALA X 107 -11.501 45.697 -75.180 1.00 15.00 ATOM 108 CA THR X 108 -9.963 42.312 -74.528 1.00 15.00 ATOM 109 CA ASP X 109 -12.766 40.354 -72.862 1.00 15.00 ATOM 110 CA GLY X 110 -15.827 42.394 -73.762 1.00 15.00 ATOM 111 CA PRO X 111 -19.307 41.939 -72.247 1.00 15.00 ATOM 112 CA MET X 112 -19.118 39.889 -69.047 1.00 15.00 ATOM 113 CA PRO X 113 -21.538 38.966 -66.246 1.00 15.00 ATOM 114 CA GLN X 114 -20.988 42.018 -64.055 1.00 15.00 ATOM 115 CA THR X 115 -21.416 44.170 -67.147 1.00 15.00 ATOM 116 CA ARG X 116 -24.930 42.991 -67.924 1.00 15.00 ATOM 117 CA GLU X 117 -25.860 43.099 -64.187 1.00 15.00 ATOM 118 CA HIS X 118 -24.771 46.740 -63.835 1.00 15.00 ATOM 119 CA ILE X 119 -26.387 47.959 -67.010 1.00 15.00 ATOM 120 CA LEU X 120 -29.643 46.315 -65.957 1.00 15.00 ATOM 121 CA LEU X 121 -29.334 47.627 -62.431 1.00 15.00 ATOM 122 CA GLY X 122 -28.628 50.952 -64.054 1.00 15.00 ATOM 123 CA ARG X 123 -31.686 51.008 -66.259 1.00 15.00 ATOM 124 CA GLN X 124 -33.598 49.822 -63.141 1.00 15.00 ATOM 125 CA VAL X 125 -32.450 52.530 -60.769 1.00 15.00 ATOM 126 CA GLY X 126 -32.664 56.115 -62.090 1.00 15.00 ATOM 127 CA VAL X 127 -29.618 56.797 -64.344 1.00 15.00 ATOM 128 CA PRO X 128 -30.625 58.412 -67.671 1.00 15.00 ATOM 129 CA TYR X 129 -27.410 58.243 -69.701 1.00 15.00 ATOM 130 CA ILE X 130 -24.559 55.833 -70.332 1.00 15.00 ATOM 131 CA ILE X 131 -21.288 56.553 -72.088 1.00 15.00 ATOM 132 CA VAL X 132 -19.410 53.327 -72.903 1.00 15.00 ATOM 133 CA PHE X 133 -15.629 53.384 -72.611 1.00 15.00 ATOM 134 CA LEU X 134 -13.648 50.562 -74.289 1.00 15.00 ATOM 135 CA ASN X 135 -10.629 50.111 -72.077 1.00 15.00 ATOM 136 CA LYS X 136 -7.293 48.374 -72.439 1.00 15.00 ATOM 137 CA CYS X 137 -7.104 49.276 -76.119 1.00 15.00 ATOM 138 CA ASP X 138 -3.385 49.187 -75.484 1.00 15.00 ATOM 139 CA MET X 139 -3.681 45.402 -75.478 1.00 15.00 ATOM 140 CA VAL X 140 -5.498 44.888 -78.713 1.00 15.00 ATOM 141 CA ASP X 141 -4.349 46.120 -82.082 1.00 15.00 ATOM 142 CA ASP X 142 -6.864 44.696 -84.502 1.00 15.00 ATOM 143 CA GLU X 143 -9.100 47.584 -85.552 1.00 15.00 ATOM 144 CA GLU X 144 -11.486 44.754 -86.446 1.00 15.00 ATOM 145 CA LEU X 145 -11.732 43.373 -82.909 1.00 15.00 ATOM 146 CA LEU X 146 -13.026 46.670 -81.542 1.00 15.00 ATOM 147 CA GLU X 147 -15.567 46.769 -84.394 1.00 15.00 ATOM 148 CA LEU X 148 -16.766 43.391 -83.178 1.00 15.00 ATOM 149 CA VAL X 149 -16.968 44.220 -79.451 1.00 15.00 ATOM 150 CA GLU X 150 -18.499 47.684 -79.796 1.00 15.00 ATOM 151 CA MET X 151 -21.019 46.165 -82.166 1.00 15.00 ATOM 152 CA GLU X 152 -21.878 43.859 -79.263 1.00 15.00 ATOM 153 CA VAL X 153 -21.796 46.327 -76.354 1.00 15.00 ATOM 154 CA ARG X 154 -24.403 48.333 -78.223 1.00 15.00 ATOM 155 CA GLU X 155 -26.665 45.382 -79.005 1.00 15.00 ATOM 156 CA LEU X 156 -26.419 44.746 -75.257 1.00 15.00 ATOM 157 CA LEU X 157 -27.337 48.209 -74.011 1.00 15.00 ATOM 158 CA SER X 158 -30.260 48.508 -76.435 1.00 15.00 ATOM 159 CA GLN X 159 -31.401 45.136 -75.084 1.00 15.00 ATOM 160 CA TYR X 160 -32.195 46.725 -71.710 1.00 15.00 ATOM 161 CA ASP X 161 -33.500 49.771 -73.570 1.00 15.00 ATOM 162 CA PHE X 162 -30.815 52.379 -73.865 1.00 15.00 ATOM 163 CA PRO X 163 -29.675 54.527 -76.755 1.00 15.00 ATOM 164 CA GLY X 164 -26.830 52.199 -77.687 1.00 15.00 ATOM 165 CA ASP X 165 -26.677 53.382 -81.254 1.00 15.00 ATOM 166 CA ASP X 166 -26.726 57.078 -80.463 1.00 15.00 ATOM 167 CA THR X 167 -24.500 55.986 -77.566 1.00 15.00 ATOM 168 CA PRO X 168 -21.043 57.564 -77.574 1.00 15.00 ATOM 169 CA ILE X 169 -18.034 55.275 -77.154 1.00 15.00 ATOM 170 CA VAL X 170 -14.516 56.447 -76.424 1.00 15.00 ATOM 171 CA ARG X 171 -11.550 54.171 -77.263 1.00 15.00 ATOM 172 CA GLY X 172 -8.635 54.441 -74.891 1.00 15.00 ATOM 173 CA SER X 173 -6.528 53.084 -72.062 1.00 15.00 ATOM 174 CA ALA X 174 -6.586 54.164 -68.450 1.00 15.00 ATOM 175 CA LEU X 175 -3.116 53.326 -67.076 1.00 15.00 ATOM 176 CA LYS X 176 -1.618 54.400 -70.368 1.00 15.00 ATOM 177 CA ALA X 177 -3.145 57.845 -69.924 1.00 15.00 ATOM 178 CA LEU X 178 -2.634 57.859 -66.162 1.00 15.00 ATOM 179 CA GLU X 179 1.002 57.123 -66.862 1.00 15.00 ATOM 180 CA GLY X 180 1.596 59.894 -69.382 1.00 15.00 ATOM 181 CA ASP X 181 1.563 58.692 -72.976 1.00 15.00 ATOM 182 CA ALA X 182 -0.306 61.621 -74.462 1.00 15.00 ATOM 183 CA GLU X 183 -1.657 59.586 -77.390 1.00 15.00 ATOM 184 CA TRP X 184 -4.061 58.366 -74.717 1.00 15.00 ATOM 185 CA GLU X 185 -4.352 61.372 -72.428 1.00 15.00 ATOM 186 CA ALA X 186 -6.206 62.720 -75.437 1.00 15.00 ATOM 187 CA LYS X 187 -8.676 59.847 -75.282 1.00 15.00 ATOM 188 CA ILE X 188 -9.380 60.665 -71.645 1.00 15.00 ATOM 189 CA LEU X 189 -10.641 64.022 -72.887 1.00 15.00 ATOM 190 CA GLU X 190 -12.611 62.568 -75.810 1.00 15.00 ATOM 191 CA LEU X 191 -14.624 61.168 -72.887 1.00 15.00 ATOM 192 CA ALA X 192 -14.319 63.940 -70.407 1.00 15.00 ATOM 193 CA GLY X 193 -15.658 65.747 -73.452 1.00 15.00 ATOM 194 CA PHE X 194 -18.921 63.824 -73.731 1.00 15.00 ATOM 195 CA LEU X 195 -19.863 64.261 -70.074 1.00 15.00 ATOM 196 CA ASP X 196 -20.824 67.767 -71.206 1.00 15.00 ATOM 197 CA SER X 197 -21.681 67.160 -74.836 1.00 15.00 ATOM 198 CA TYR X 198 -23.960 64.379 -73.718 1.00 15.00 ATOM 199 CA ILE X 199 -25.147 65.135 -70.140 1.00 15.00 ATOM 200 CA PRO X 200 -27.397 67.184 -70.895 1.00 15.00 ATOM 201 CA GLU X 201 -27.803 69.771 -68.028 1.00 15.00 ATOM 202 CA PRO X 202 -29.627 68.511 -64.887 1.00 15.00 TER