HEADER RIBOSOMAL PROTEIN/RNA 30-SEP-08 3EQ4 TITLE Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state TITLE 2 revealed by cryo-EM COMPND MOL_ID: 1; COMPND 2 MOLECULE: Elongation factor Tu; COMPND 3 CHAIN: X; EXPDTA ELECTRON MICROSCOPY DBREF 3EQ4 X 1 393 UNP P0A6N1 EFTU_ECOLI 2 394 SEQRES 1 X 202 SER LYS GLU LYS PHE GLU ARG THR LYS PRO HIS VAL ASN SEQRES 2 X 202 VAL GLY THR ILE GLY HIS VAL ASP HIS GLY LYS THR THR SEQRES 3 X 202 LEU THR ALA ALA ILE THR THR VAL LEU ALA LYS THR TYR SEQRES 4 X 202 GLY GLY ALA ALA ARG ALA PHE ASP GLN ILE ASP ASN ALA SEQRES 5 X 202 PRO GLU GLU LYS ALA ARG GLY ILE THR ILE ASN THR SER SEQRES 6 X 202 HIS VAL GLU TYR ASP THR PRO THR ARG HIS TYR ALA HIS SEQRES 7 X 202 VAL ASP CYS PRO GLY HIS ALA ASP TYR VAL LYS ASN MET SEQRES 8 X 202 ILE THR GLY ALA ALA GLN MET ASP GLY ALA ILE LEU VAL SEQRES 9 X 202 VAL ALA ALA THR ASP GLY PRO MET PRO GLN THR ARG GLU SEQRES 10 X 202 HIS ILE LEU LEU GLY ARG GLN VAL GLY VAL PRO TYR ILE SEQRES 11 X 202 ILE VAL PHE LEU ASN LYS CYS ASP MET VAL ASP ASP GLU SEQRES 12 X 202 GLU LEU LEU GLU LEU VAL GLU MET GLU VAL ARG GLU LEU SEQRES 13 X 202 LEU SER GLN TYR ASP PHE PRO GLY ASP ASP THR PRO ILE SEQRES 14 X 202 VAL ARG GLY SER ALA LEU LYS ALA LEU GLU GLY ASP ALA SEQRES 15 X 202 GLU TRP GLU ALA LYS ILE LEU GLU LEU ALA GLY PHE LEU SEQRES 16 X 202 ASP SER TYR ILE PRO GLU PRO ATOM 1 CA SER X 1 -12.516 77.672 -49.330 1.00 15.00 ATOM 2 CA LYS X 2 -11.070 80.920 -50.679 1.00 15.00 ATOM 3 CA GLU X 3 -10.704 80.399 -54.409 1.00 15.00 ATOM 4 CA LYS X 4 -13.764 81.679 -56.227 1.00 15.00 ATOM 5 CA PHE X 5 -14.968 79.660 -59.168 1.00 15.00 ATOM 6 CA GLU X 6 -16.227 82.208 -61.660 1.00 15.00 ATOM 7 CA ARG X 7 -18.894 81.202 -64.116 1.00 15.00 ATOM 8 CA THR X 8 -18.118 80.734 -67.856 1.00 15.00 ATOM 9 CA LYS X 9 -19.572 78.276 -70.395 1.00 15.00 ATOM 10 CA PRO X 10 -22.554 76.044 -69.645 1.00 15.00 ATOM 11 CA HIS X 11 -21.924 73.406 -66.981 1.00 15.00 ATOM 12 CA VAL X 12 -22.309 69.900 -68.211 1.00 15.00 ATOM 13 CA ASN X 13 -21.677 67.041 -65.787 1.00 15.00 ATOM 14 CA VAL X 14 -20.762 63.676 -67.229 1.00 15.00 ATOM 15 CA GLY X 15 -19.027 60.405 -66.354 1.00 15.00 ATOM 16 CA THR X 16 -17.678 56.924 -67.048 1.00 15.00 ATOM 17 CA ILE X 17 -19.548 53.596 -67.032 1.00 15.00 ATOM 18 CA GLY X 18 -18.850 50.244 -68.613 1.00 15.00 ATOM 19 CA HIS X 19 -17.626 46.761 -67.846 1.00 15.00 ATOM 20 CA VAL X 20 -14.984 46.140 -65.218 1.00 15.00 ATOM 21 CA ASP X 21 -11.208 46.123 -65.470 1.00 15.00 ATOM 22 CA HIS X 22 -11.111 47.973 -68.754 1.00 15.00 ATOM 23 CA GLY X 23 -10.680 51.739 -68.840 1.00 15.00 ATOM 24 CA LYS X 24 -13.151 53.807 -66.822 1.00 15.00 ATOM 25 CA THR X 25 -11.137 54.812 -63.779 1.00 15.00 ATOM 26 CA THR X 26 -7.863 55.348 -65.619 1.00 15.00 ATOM 27 CA LEU X 27 -9.414 57.114 -68.581 1.00 15.00 ATOM 28 CA THR X 28 -10.767 59.606 -66.044 1.00 15.00 ATOM 29 CA ALA X 29 -7.314 60.513 -64.743 1.00 15.00 ATOM 30 CA ALA X 30 -6.118 60.727 -68.341 1.00 15.00 ATOM 31 CA ILE X 31 -8.753 63.281 -69.404 1.00 15.00 ATOM 32 CA THR X 32 -7.931 65.304 -66.294 1.00 15.00 ATOM 33 CA THR X 33 -4.150 65.205 -66.868 1.00 15.00 ATOM 34 CA VAL X 34 -4.279 65.524 -70.632 1.00 15.00 ATOM 35 CA LEU X 35 -6.554 68.530 -70.547 1.00 15.00 ATOM 36 CA ALA X 36 -4.483 70.000 -67.708 1.00 15.00 ATOM 37 CA LYS X 37 -2.296 71.198 -70.554 1.00 15.00 ATOM 38 CA THR X 38 -4.055 71.017 -73.893 1.00 15.00 ATOM 39 CA TYR X 39 -6.419 73.576 -72.204 1.00 15.00 ATOM 40 CA GLY X 40 -4.493 74.120 -68.947 1.00 15.00 ATOM 41 CA GLY X 41 -6.756 72.990 -66.106 1.00 15.00 ATOM 42 CA ALA X 42 -5.403 71.094 -63.068 1.00 15.00 ATOM 43 CA ALA X 43 -5.096 67.291 -63.132 1.00 15.00 ATOM 44 CA ARG X 44 -5.045 64.322 -60.750 1.00 15.00 ATOM 45 CA ALA X 45 -3.936 60.677 -60.893 1.00 15.00 ATOM 46 CA PHE X 46 -5.200 57.158 -60.328 1.00 15.00 ATOM 47 CA ASP X 47 -3.785 57.158 -56.806 1.00 15.00 ATOM 48 CA GLN X 48 -6.076 60.152 -56.323 1.00 15.00 ATOM 49 CA ILE X 49 -9.215 58.906 -58.069 1.00 15.00 ATOM 50 CA ASP X 50 -9.375 55.459 -56.457 1.00 15.00 ATOM 51 CA ASN X 51 -8.110 57.095 -53.229 1.00 15.00 ATOM 52 CA ALA X 52 -9.884 54.550 -51.041 1.00 15.00 ATOM 53 CA PRO X 53 -7.588 51.874 -49.589 1.00 15.00 ATOM 54 CA GLU X 54 -9.886 48.957 -50.329 1.00 15.00 ATOM 55 CA GLU X 55 -9.862 50.149 -53.935 1.00 15.00 ATOM 56 CA LYS X 56 -6.084 50.188 -53.787 1.00 15.00 ATOM 57 CA ALA X 57 -5.620 46.697 -52.402 1.00 15.00 ATOM 58 CA ARG X 58 -8.507 45.184 -54.343 1.00 15.00 ATOM 59 CA GLY X 59 -7.718 47.289 -57.401 1.00 15.00 ATOM 60 CA ILE X 60 -11.301 47.800 -58.441 1.00 15.00 ATOM 61 CA THR X 61 -13.167 51.053 -57.633 1.00 15.00 ATOM 62 CA ILE X 62 -16.040 50.676 -55.179 1.00 15.00 ATOM 63 CA ASN X 63 -17.657 54.094 -54.804 1.00 15.00 ATOM 64 CA THR X 64 -18.031 56.737 -57.463 1.00 15.00 ATOM 65 CA SER X 65 -15.730 59.728 -57.070 1.00 15.00 ATOM 66 CA HIS X 66 -16.110 63.190 -58.560 1.00 15.00 ATOM 67 CA VAL X 67 -13.534 64.914 -60.693 1.00 15.00 ATOM 68 CA GLU X 68 -13.444 68.122 -62.705 1.00 15.00 ATOM 69 CA TYR X 69 -11.873 69.373 -65.904 1.00 15.00 ATOM 70 CA ASP X 70 -12.349 72.232 -68.405 1.00 15.00 ATOM 71 CA THR X 71 -12.910 72.206 -72.190 1.00 15.00 ATOM 72 CA PRO X 72 -13.053 75.567 -73.996 1.00 15.00 ATOM 73 CA THR X 73 -16.775 75.802 -74.611 1.00 15.00 ATOM 74 CA ARG X 74 -18.147 73.864 -71.588 1.00 15.00 ATOM 75 CA HIS X 75 -17.523 72.950 -67.971 1.00 15.00 ATOM 76 CA TYR X 76 -17.288 69.367 -66.850 1.00 15.00 ATOM 77 CA ALA X 77 -18.212 67.529 -63.661 1.00 15.00 ATOM 78 CA HIS X 78 -17.000 63.969 -64.066 1.00 15.00 ATOM 79 CA VAL X 79 -18.090 60.972 -62.090 1.00 15.00 ATOM 80 CA ASP X 80 -16.236 57.671 -62.219 1.00 15.00 ATOM 81 CA CYS X 81 -18.468 54.649 -61.819 1.00 15.00 ATOM 82 CA PRO X 82 -17.547 51.169 -60.593 1.00 15.00 ATOM 83 CA GLY X 83 -18.037 48.393 -63.100 1.00 15.00 ATOM 84 CA HIS X 84 -18.079 45.606 -60.530 1.00 15.00 ATOM 85 CA ALA X 85 -21.430 43.864 -60.480 1.00 15.00 ATOM 86 CA ASP X 86 -21.632 44.153 -56.722 1.00 15.00 ATOM 87 CA TYR X 87 -21.824 47.911 -56.929 1.00 15.00 ATOM 88 CA VAL X 88 -24.272 48.731 -59.768 1.00 15.00 ATOM 89 CA LYS X 89 -26.483 50.210 -57.089 1.00 15.00 ATOM 90 CA ASN X 90 -23.641 52.625 -56.353 1.00 15.00 ATOM 91 CA MET X 91 -23.211 53.670 -59.995 1.00 15.00 ATOM 92 CA ILE X 92 -26.935 53.655 -60.712 1.00 15.00 ATOM 93 CA THR X 93 -27.229 56.711 -58.502 1.00 15.00 ATOM 94 CA GLY X 94 -24.209 58.347 -60.091 1.00 15.00 ATOM 95 CA ALA X 95 -25.433 57.835 -63.596 1.00 15.00 ATOM 96 CA ALA X 96 -29.016 58.772 -62.770 1.00 15.00 ATOM 97 CA GLN X 97 -27.870 62.416 -62.608 1.00 15.00 ATOM 98 CA MET X 98 -25.674 62.365 -65.728 1.00 15.00 ATOM 99 CA ASP X 99 -26.090 64.666 -68.722 1.00 15.00 ATOM 100 CA GLY X 100 -24.343 62.283 -71.070 1.00 15.00 ATOM 101 CA ALA X 101 -22.142 59.265 -70.489 1.00 15.00 ATOM 102 CA ILE X 102 -18.813 58.033 -71.801 1.00 15.00 ATOM 103 CA LEU X 103 -19.208 54.272 -72.145 1.00 15.00 ATOM 104 CA VAL X 104 -15.629 52.942 -72.023 1.00 15.00 ATOM 105 CA VAL X 105 -15.071 49.569 -73.733 1.00 15.00 ATOM 106 CA ALA X 106 -11.781 47.685 -74.185 1.00 15.00 ATOM 107 CA ALA X 107 -10.659 46.841 -77.711 1.00 15.00 ATOM 108 CA THR X 108 -9.344 43.470 -76.639 1.00 15.00 ATOM 109 CA ASP X 109 -12.361 41.790 -75.044 1.00 15.00 ATOM 110 CA GLY X 110 -15.239 43.864 -76.369 1.00 15.00 ATOM 111 CA PRO X 111 -18.844 43.695 -75.111 1.00 15.00 ATOM 112 CA MET X 112 -19.007 41.941 -71.739 1.00 15.00 ATOM 113 CA PRO X 113 -21.681 41.379 -69.077 1.00 15.00 ATOM 114 CA GLN X 114 -21.156 44.593 -67.124 1.00 15.00 ATOM 115 CA THR X 115 -21.235 46.469 -70.418 1.00 15.00 ATOM 116 CA ARG X 116 -24.730 45.371 -71.375 1.00 15.00 ATOM 117 CA GLU X 117 -25.944 45.859 -67.751 1.00 15.00 ATOM 118 CA HIS X 118 -24.710 49.467 -67.632 1.00 15.00 ATOM 119 CA ILE X 119 -26.011 50.457 -71.024 1.00 15.00 ATOM 120 CA LEU X 120 -29.415 49.054 -70.102 1.00 15.00 ATOM 121 CA LEU X 121 -29.320 50.668 -66.692 1.00 15.00 ATOM 122 CA GLY X 122 -28.328 53.799 -68.536 1.00 15.00 ATOM 123 CA ARG X 123 -31.197 53.780 -70.982 1.00 15.00 ATOM 124 CA GLN X 124 -33.403 52.965 -67.940 1.00 15.00 ATOM 125 CA VAL X 125 -32.313 55.829 -65.729 1.00 15.00 ATOM 126 CA GLY X 126 -32.249 59.283 -67.373 1.00 15.00 ATOM 127 CA VAL X 127 -29.005 59.630 -69.419 1.00 15.00 ATOM 128 CA PRO X 128 -29.668 60.973 -72.948 1.00 15.00 ATOM 129 CA TYR X 129 -26.318 60.486 -74.683 1.00 15.00 ATOM 130 CA ILE X 130 -23.547 57.912 -74.864 1.00 15.00 ATOM 131 CA ILE X 131 -20.117 58.332 -76.400 1.00 15.00 ATOM 132 CA VAL X 132 -18.340 54.969 -76.771 1.00 15.00 ATOM 133 CA PHE X 133 -14.595 54.896 -76.176 1.00 15.00 ATOM 134 CA LEU X 134 -12.630 51.853 -77.430 1.00 15.00 ATOM 135 CA ASN X 135 -9.818 51.480 -74.946 1.00 15.00 ATOM 136 CA LYS X 136 -6.554 49.581 -74.878 1.00 15.00 ATOM 137 CA CYS X 137 -6.033 50.133 -78.595 1.00 15.00 ATOM 138 CA ASP X 138 -2.383 49.949 -77.651 1.00 15.00 ATOM 139 CA MET X 139 -2.864 46.195 -77.336 1.00 15.00 ATOM 140 CA VAL X 140 -4.445 45.464 -80.652 1.00 15.00 ATOM 141 CA ASP X 141 -2.976 46.333 -84.010 1.00 15.00 ATOM 142 CA ASP X 142 -5.361 44.800 -86.494 1.00 15.00 ATOM 143 CA GLU X 143 -7.364 47.670 -87.975 1.00 15.00 ATOM 144 CA GLU X 144 -9.808 44.872 -88.810 1.00 15.00 ATOM 145 CA LEU X 145 -10.398 43.832 -85.199 1.00 15.00 ATOM 146 CA LEU X 146 -11.632 47.291 -84.237 1.00 15.00 ATOM 147 CA GLU X 147 -13.934 47.234 -87.286 1.00 15.00 ATOM 148 CA LEU X 148 -15.389 44.035 -85.881 1.00 15.00 ATOM 149 CA VAL X 149 -15.840 45.208 -82.270 1.00 15.00 ATOM 150 CA GLU X 150 -17.169 48.687 -83.043 1.00 15.00 ATOM 151 CA MET X 151 -19.567 47.063 -85.471 1.00 15.00 ATOM 152 CA GLU X 152 -20.762 45.070 -82.457 1.00 15.00 ATOM 153 CA VAL X 153 -20.787 47.789 -79.779 1.00 15.00 ATOM 154 CA ARG X 154 -23.139 49.722 -82.025 1.00 15.00 ATOM 155 CA GLU X 155 -25.474 46.808 -82.728 1.00 15.00 ATOM 156 CA LEU X 156 -25.554 46.508 -78.932 1.00 15.00 ATOM 157 CA LEU X 157 -26.397 50.106 -78.074 1.00 15.00 ATOM 158 CA SER X 158 -29.103 50.302 -80.748 1.00 15.00 ATOM 159 CA GLN X 159 -30.509 47.119 -79.204 1.00 15.00 ATOM 160 CA TYR X 160 -31.487 49.041 -76.059 1.00 15.00 ATOM 161 CA ASP X 161 -32.491 51.956 -78.282 1.00 15.00 ATOM 162 CA PHE X 162 -29.668 54.412 -78.582 1.00 15.00 ATOM 163 CA PRO X 163 -28.202 56.238 -81.546 1.00 15.00 ATOM 164 CA GLY X 164 -25.410 53.718 -82.033 1.00 15.00 ATOM 165 CA ASP X 165 -24.920 54.562 -85.664 1.00 15.00 ATOM 166 CA ASP X 166 -24.851 58.314 -85.209 1.00 15.00 ATOM 167 CA THR X 167 -22.914 57.401 -82.052 1.00 15.00 ATOM 168 CA PRO X 168 -19.394 58.826 -81.915 1.00 15.00 ATOM 169 CA ILE X 169 -16.543 56.462 -81.049 1.00 15.00 ATOM 170 CA VAL X 170 -13.039 57.548 -80.138 1.00 15.00 ATOM 171 CA ARG X 171 -10.132 55.083 -80.527 1.00 15.00 ATOM 172 CA GLY X 172 -7.401 55.448 -77.956 1.00 15.00 ATOM 173 CA SER X 173 -5.591 54.270 -74.855 1.00 15.00 ATOM 174 CA ALA X 174 -5.879 55.677 -71.368 1.00 15.00 ATOM 175 CA LEU X 175 -2.572 54.825 -69.645 1.00 15.00 ATOM 176 CA LYS X 176 -0.770 55.530 -72.884 1.00 15.00 ATOM 177 CA ALA X 177 -2.158 59.061 -72.871 1.00 15.00 ATOM 178 CA LEU X 178 -1.942 59.398 -69.097 1.00 15.00 ATOM 179 CA GLU X 179 1.697 58.451 -69.427 1.00 15.00 ATOM 180 CA GLY X 180 2.621 60.953 -72.123 1.00 15.00 ATOM 181 CA ASP X 181 2.811 59.429 -75.588 1.00 15.00 ATOM 182 CA ALA X 182 1.208 62.286 -77.474 1.00 15.00 ATOM 183 CA GLU X 183 -0.006 60.049 -80.314 1.00 15.00 ATOM 184 CA TRP X 184 -2.668 59.179 -77.751 1.00 15.00 ATOM 185 CA GLU X 185 -2.992 62.391 -75.766 1.00 15.00 ATOM 186 CA ALA X 186 -4.537 63.535 -79.025 1.00 15.00 ATOM 187 CA LYS X 187 -7.148 60.793 -78.821 1.00 15.00 ATOM 188 CA ILE X 188 -8.094 61.969 -75.341 1.00 15.00 ATOM 189 CA LEU X 189 -9.088 65.248 -76.973 1.00 15.00 ATOM 190 CA GLU X 190 -10.892 63.615 -79.909 1.00 15.00 ATOM 191 CA LEU X 191 -13.193 62.573 -77.050 1.00 15.00 ATOM 192 CA ALA X 192 -12.949 65.546 -74.806 1.00 15.00 ATOM 193 CA GLY X 193 -13.955 67.121 -78.098 1.00 15.00 ATOM 194 CA PHE X 194 -17.277 65.318 -78.475 1.00 15.00 ATOM 195 CA LEU X 195 -18.479 66.127 -74.960 1.00 15.00 ATOM 196 CA ASP X 196 -19.177 69.550 -76.471 1.00 15.00 ATOM 197 CA SER X 197 -19.776 68.651 -80.091 1.00 15.00 ATOM 198 CA TYR X 198 -22.268 66.080 -78.926 1.00 15.00 ATOM 199 CA ILE X 199 -23.693 67.209 -75.538 1.00 15.00 ATOM 200 CA PRO X 200 -25.775 69.272 -76.653 1.00 15.00 ATOM 201 CA GLU X 201 -26.277 72.125 -74.067 1.00 15.00 ATOM 202 CA PRO X 202 -28.400 71.234 -70.989 1.00 15.00 TER