HEADER SIGNALING PROTEIN/LIGASE 06-MAY-09 3HCU TITLE Crystal structure of TRAF6 in complex with Ubc13 in the C2 space COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF receptor-associated factor 6; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RING and Zinc Finger 1: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.60 ANGSTORMS DBREF 3HCU C 50 159 UNP Q9Y4K3 TRAF6_HUMAN 50 159 SEQRES 1 C 28 LEU MET VAL LYS CYS PRO ASN GLU GLY CYS LEU HIS LYS SEQRES 2 C 28 MET GLU LEU ARG HIS LEU GLU ASP HIS GLN ALA HIS CYS SEQRES 3 C 28 GLU PHE ATOM 1 N LEU C 130 5.668 20.914 10.195 1.00 92.02 ATOM 2 CA LEU C 130 6.318 19.756 9.602 1.00 94.97 ATOM 3 C LEU C 130 7.245 19.108 10.639 1.00 97.58 ATOM 4 O LEU C 130 7.651 19.758 11.602 1.00 98.35 ATOM 5 CB LEU C 130 7.104 20.201 8.360 1.00 94.55 ATOM 6 CG LEU C 130 6.321 20.989 7.301 1.00 92.87 ATOM 7 CD1 LEU C 130 7.260 21.471 6.220 1.00 92.24 ATOM 8 CD2 LEU C 130 5.238 20.115 6.703 1.00 92.52 ATOM 9 N MET C 131 7.583 17.836 10.436 1.00100.10 ATOM 10 CA MET C 131 8.442 17.095 11.367 1.00102.88 ATOM 11 C MET C 131 9.950 17.185 11.111 1.00103.64 ATOM 12 O MET C 131 10.430 16.837 10.031 1.00102.99 ATOM 13 CB MET C 131 8.025 15.617 11.382 1.00104.65 ATOM 14 CG MET C 131 7.666 15.095 12.765 1.00106.53 ATOM 15 SD MET C 131 6.546 16.226 13.636 1.00109.67 ATOM 16 CE MET C 131 4.939 15.716 12.972 1.00107.87 ATOM 17 N VAL C 132 10.696 17.632 12.118 1.00105.22 ATOM 18 CA VAL C 132 12.146 17.747 11.992 1.00107.78 ATOM 19 C VAL C 132 12.888 16.669 12.775 1.00109.44 ATOM 20 O VAL C 132 12.578 16.388 13.932 1.00109.86 ATOM 21 CB VAL C 132 12.656 19.124 12.466 1.00107.76 ATOM 22 CG1 VAL C 132 12.092 20.221 11.573 1.00108.24 ATOM 23 CG2 VAL C 132 12.270 19.355 13.917 1.00107.44 ATOM 24 N LYS C 133 13.880 16.075 12.127 1.00111.01 ATOM 25 CA LYS C 133 14.682 15.021 12.726 1.00112.75 ATOM 26 C LYS C 133 15.985 15.593 13.284 1.00114.58 ATOM 27 O LYS C 133 17.003 15.620 12.592 1.00113.95 ATOM 28 CB LYS C 133 14.966 13.954 11.664 1.00112.89 ATOM 29 CG LYS C 133 15.813 12.783 12.119 1.00112.38 ATOM 30 CD LYS C 133 15.858 11.696 11.046 1.00112.16 ATOM 31 CE LYS C 133 16.369 12.232 9.715 1.00111.28 ATOM 32 NZ LYS C 133 16.451 11.167 8.677 1.00110.91 ATOM 33 N CYS C 134 15.927 16.050 14.536 1.00115.74 ATOM 34 CA CYS C 134 17.059 16.632 15.268 1.00118.42 ATOM 35 C CYS C 134 18.470 16.252 14.776 1.00120.73 ATOM 36 O CYS C 134 18.721 15.109 14.390 1.00119.89 ATOM 37 CB CYS C 134 16.922 16.277 16.750 1.00118.38 ATOM 38 SG CYS C 134 18.289 16.811 17.808 1.00117.35 ATOM 39 N PRO C 135 19.413 17.215 14.806 1.00123.36 ATOM 40 CA PRO C 135 20.814 17.060 14.375 1.00125.48 ATOM 41 C PRO C 135 21.884 16.607 15.392 1.00127.19 ATOM 42 O PRO C 135 21.648 16.577 16.602 1.00127.21 ATOM 43 CB PRO C 135 21.133 18.435 13.803 1.00125.50 ATOM 44 CG PRO C 135 20.415 19.337 14.765 1.00125.01 ATOM 45 CD PRO C 135 19.072 18.645 14.960 1.00123.96 ATOM 46 N ASN C 136 23.066 16.270 14.861 1.00129.72 ATOM 47 CA ASN C 136 24.232 15.822 15.639 1.00131.85 ATOM 48 C ASN C 136 23.874 14.788 16.710 1.00133.28 ATOM 49 O ASN C 136 23.484 15.160 17.817 1.00133.48 ATOM 50 CB ASN C 136 24.914 17.035 16.287 1.00131.98 ATOM 51 CG ASN C 136 26.205 16.674 17.002 1.00131.81 ATOM 52 OD1 ASN C 136 27.148 16.173 16.390 1.00131.54 ATOM 53 ND2 ASN C 136 26.254 16.934 18.305 1.00131.61 ATOM 54 N GLU C 137 24.039 13.502 16.386 1.00134.54 ATOM 55 CA GLU C 137 23.691 12.409 17.303 1.00136.13 ATOM 56 C GLU C 137 22.312 12.742 17.856 1.00137.11 ATOM 57 O GLU C 137 21.284 12.381 17.279 1.00137.13 ATOM 58 CB GLU C 137 24.692 12.298 18.465 1.00136.48 ATOM 59 CG GLU C 137 26.095 11.828 18.080 1.00138.28 ATOM 60 CD GLU C 137 26.954 11.450 19.289 1.00138.72 ATOM 61 OE1 GLU C 137 26.598 10.479 19.993 1.00138.90 ATOM 62 OE2 GLU C 137 27.984 12.120 19.535 1.00138.34 ATOM 63 N GLY C 138 22.319 13.443 18.983 1.00138.11 ATOM 64 CA GLY C 138 21.102 13.893 19.627 1.00138.62 ATOM 65 C GLY C 138 19.931 12.949 19.796 1.00138.82 ATOM 66 O GLY C 138 19.985 11.764 19.451 1.00138.85 ATOM 67 N CYS C 139 18.862 13.520 20.342 1.00138.64 ATOM 68 CA CYS C 139 17.614 12.823 20.616 1.00138.57 ATOM 69 C CYS C 139 16.900 12.410 19.339 1.00137.94 ATOM 70 O CYS C 139 16.093 13.170 18.803 1.00137.87 ATOM 71 CB CYS C 139 16.688 13.731 21.428 1.00139.02 ATOM 72 SG CYS C 139 16.349 15.312 20.608 1.00138.86 ATOM 73 N LEU C 140 17.201 11.212 18.850 1.00137.18 ATOM 74 CA LEU C 140 16.552 10.720 17.646 1.00136.35 ATOM 75 C LEU C 140 15.048 10.622 17.918 1.00135.71 ATOM 76 O LEU C 140 14.507 9.544 18.174 1.00135.40 ATOM 77 CB LEU C 140 17.135 9.358 17.230 1.00136.16 ATOM 78 CG LEU C 140 18.377 9.366 16.320 1.00135.79 ATOM 79 CD1 LEU C 140 19.474 10.227 16.921 1.00135.41 ATOM 80 CD2 LEU C 140 18.870 7.942 16.110 1.00135.39 ATOM 81 N HIS C 141 14.396 11.783 17.880 1.00135.11 ATOM 82 CA HIS C 141 12.959 11.915 18.102 1.00133.52 ATOM 83 C HIS C 141 12.420 13.082 17.268 1.00131.62 ATOM 84 O HIS C 141 13.012 14.166 17.237 1.00131.37 ATOM 85 CB HIS C 141 12.664 12.149 19.589 1.00134.03 ATOM 86 CG HIS C 141 12.892 10.943 20.449 1.00134.22 ATOM 87 ND1 HIS C 141 12.365 9.705 20.148 1.00133.93 ATOM 88 CD2 HIS C 141 13.572 10.789 21.610 1.00134.22 ATOM 89 CE1 HIS C 141 12.708 8.841 21.087 1.00133.78 ATOM 90 NE2 HIS C 141 13.440 9.474 21.986 1.00134.15 ATOM 91 N LYS C 142 11.299 12.848 16.592 1.00128.87 ATOM 92 CA LYS C 142 10.686 13.866 15.752 1.00126.08 ATOM 93 C LYS C 142 10.185 15.046 16.574 1.00123.88 ATOM 94 O LYS C 142 10.596 15.230 17.718 1.00122.90 ATOM 95 CB LYS C 142 9.533 13.263 14.944 1.00126.54 ATOM 96 CG LYS C 142 9.959 12.186 13.950 1.00127.20 ATOM 97 CD LYS C 142 10.440 10.934 14.664 1.00127.50 ATOM 98 CE LYS C 142 10.875 9.861 13.689 1.00127.32 ATOM 99 NZ LYS C 142 11.297 8.641 14.427 1.00127.85 ATOM 100 N MET C 143 9.298 15.839 15.975 1.00121.90 ATOM 101 CA MET C 143 8.722 17.025 16.614 1.00119.61 ATOM 102 C MET C 143 8.276 18.014 15.531 1.00117.79 ATOM 103 O MET C 143 8.785 17.981 14.413 1.00117.81 ATOM 104 CB MET C 143 9.764 17.696 17.525 1.00119.02 ATOM 105 CG MET C 143 11.055 18.085 16.807 1.00118.08 ATOM 106 SD MET C 143 12.410 18.606 17.882 1.00116.32 ATOM 107 CE MET C 143 13.588 17.289 17.598 1.00116.33 ATOM 108 N GLU C 144 7.316 18.877 15.851 1.00115.84 ATOM 109 CA GLU C 144 6.855 19.875 14.887 1.00114.21 ATOM 110 C GLU C 144 7.995 20.880 14.739 1.00113.33 ATOM 111 O GLU C 144 8.630 21.225 15.730 1.00113.46 ATOM 112 CB GLU C 144 5.595 20.581 15.404 1.00113.67 ATOM 113 CG GLU C 144 4.302 19.781 15.252 1.00112.35 ATOM 114 CD GLU C 144 3.130 20.405 15.996 1.00111.97 ATOM 115 OE1 GLU C 144 3.054 20.236 17.235 1.00110.64 ATOM 116 OE2 GLU C 144 2.292 21.069 15.345 1.00110.86 ATOM 117 N LEU C 145 8.266 21.339 13.517 1.00112.00 ATOM 118 CA LEU C 145 9.353 22.298 13.292 1.00110.06 ATOM 119 C LEU C 145 9.361 23.354 14.387 1.00109.24 ATOM 120 O LEU C 145 10.417 23.824 14.812 1.00108.69 ATOM 121 CB LEU C 145 9.214 22.975 11.924 1.00109.24 ATOM 122 CG LEU C 145 10.173 24.139 11.647 1.00108.30 ATOM 123 CD1 LEU C 145 11.606 23.695 11.868 1.00107.77 ATOM 124 CD2 LEU C 145 9.975 24.644 10.225 1.00108.80 ATOM 125 N ARG C 146 8.169 23.721 14.840 1.00108.28 ATOM 126 CA ARG C 146 8.028 24.702 15.898 1.00107.83 ATOM 127 C ARG C 146 8.568 24.123 17.204 1.00108.59 ATOM 128 O ARG C 146 9.271 24.804 17.959 1.00107.85 ATOM 129 CB ARG C 146 6.555 25.076 16.060 1.00106.94 ATOM 130 CG ARG C 146 5.591 23.886 16.017 1.00104.24 ATOM 131 CD ARG C 146 4.203 24.286 16.520 1.00102.01 ATOM 132 NE ARG C 146 3.751 25.541 15.927 1.00 99.67 ATOM 133 CZ ARG C 146 2.959 25.636 14.865 1.00 99.03 ATOM 134 NH1 ARG C 146 2.507 24.539 14.268 1.00 98.55 ATOM 135 NH2 ARG C 146 2.637 26.832 14.389 1.00 97.52 ATOM 136 N HIS C 147 8.238 22.859 17.460 1.00109.59 ATOM 137 CA HIS C 147 8.675 22.174 18.673 1.00110.30 ATOM 138 C HIS C 147 10.107 21.643 18.621 1.00110.78 ATOM 139 O HIS C 147 10.395 20.535 19.075 1.00110.35 ATOM 140 CB HIS C 147 7.711 21.037 19.018 1.00109.58 ATOM 141 CG HIS C 147 6.322 21.504 19.316 1.00109.33 ATOM 142 ND1 HIS C 147 6.062 22.691 19.968 1.00109.15 ATOM 143 CD2 HIS C 147 5.117 20.940 19.064 1.00108.95 ATOM 144 CE1 HIS C 147 4.756 22.840 20.101 1.00109.23 ATOM 145 NE2 HIS C 147 4.160 21.791 19.562 1.00109.32 ATOM 146 N LEU C 148 10.993 22.443 18.041 1.00111.76 ATOM 147 CA LEU C 148 12.413 22.129 17.959 1.00112.35 ATOM 148 C LEU C 148 12.933 23.247 18.844 1.00113.68 ATOM 149 O LEU C 148 12.186 23.745 19.683 1.00114.50 ATOM 150 CB LEU C 148 12.933 22.307 16.530 1.00111.29 ATOM 151 CG LEU C 148 14.396 21.946 16.256 1.00110.61 ATOM 152 CD1 LEU C 148 14.560 20.438 16.315 1.00110.53 ATOM 153 CD2 LEU C 148 14.814 22.463 14.891 1.00109.86 ATOM 154 N GLU C 149 14.181 23.659 18.658 1.00114.70 ATOM 155 CA GLU C 149 14.744 24.749 19.451 1.00115.77 ATOM 156 C GLU C 149 14.617 24.518 20.963 1.00117.45 ATOM 157 O GLU C 149 15.621 24.475 21.671 1.00118.19 ATOM 158 CB GLU C 149 14.061 26.065 19.075 1.00114.32 ATOM 159 CG GLU C 149 14.837 27.305 19.474 1.00112.33 ATOM 160 CD GLU C 149 14.070 28.569 19.190 1.00110.72 ATOM 161 OE1 GLU C 149 13.128 28.879 19.949 1.00110.48 ATOM 162 OE2 GLU C 149 14.401 29.246 18.199 1.00109.73 ATOM 163 N ASP C 150 13.388 24.399 21.462 1.00118.62 ATOM 164 CA ASP C 150 13.173 24.154 22.884 1.00119.52 ATOM 165 C ASP C 150 13.745 22.792 23.239 1.00119.75 ATOM 166 O ASP C 150 14.227 22.579 24.353 1.00120.07 ATOM 167 CB ASP C 150 11.683 24.211 23.225 1.00120.17 ATOM 168 CG ASP C 150 11.279 25.540 23.838 1.00120.67 ATOM 169 OD1 ASP C 150 11.624 26.597 23.263 1.00120.68 ATOM 170 OD2 ASP C 150 10.614 25.526 24.895 1.00120.95 ATOM 171 N HIS C 151 13.690 21.870 22.285 1.00119.86 ATOM 172 CA HIS C 151 14.242 20.542 22.494 1.00120.24 ATOM 173 C HIS C 151 15.733 20.686 22.227 1.00120.18 ATOM 174 O HIS C 151 16.507 19.737 22.342 1.00119.35 ATOM 175 CB HIS C 151 13.618 19.548 21.521 1.00121.24 ATOM 176 CG HIS C 151 13.924 18.120 21.841 1.00122.42 ATOM 177 ND1 HIS C 151 13.209 17.069 21.310 1.00122.62 ATOM 178 CD2 HIS C 151 14.858 17.568 22.652 1.00123.08 ATOM 179 CE1 HIS C 151 13.685 15.932 21.784 1.00123.50 ATOM 180 NE2 HIS C 151 14.687 16.207 22.600 1.00123.96 ATOM 181 N GLN C 152 16.110 21.907 21.861 1.00120.98 ATOM 182 CA GLN C 152 17.491 22.274 21.575 1.00121.88 ATOM 183 C GLN C 152 18.061 23.032 22.777 1.00122.17 ATOM 184 O GLN C 152 19.276 23.098 22.958 1.00122.45 ATOM 185 CB GLN C 152 17.552 23.151 20.313 1.00122.01 ATOM 186 CG GLN C 152 18.839 23.946 20.138 1.00122.08 ATOM 187 CD GLN C 152 20.048 23.065 19.903 1.00122.48 ATOM 188 OE1 GLN C 152 20.153 22.403 18.871 1.00122.75 ATOM 189 NE2 GLN C 152 20.969 23.048 20.863 1.00122.04 ATOM 190 N ALA C 153 17.178 23.603 23.593 1.00122.36 ATOM 191 CA ALA C 153 17.597 24.336 24.784 1.00122.84 ATOM 192 C ALA C 153 17.690 23.346 25.945 1.00123.07 ATOM 193 O ALA C 153 18.327 23.615 26.969 1.00122.84 ATOM 194 CB ALA C 153 16.595 25.437 25.104 1.00122.27 ATOM 195 N HIS C 154 17.045 22.198 25.763 1.00123.16 ATOM 196 CA HIS C 154 17.037 21.133 26.756 1.00123.25 ATOM 197 C HIS C 154 17.643 19.873 26.149 1.00123.19 ATOM 198 O HIS C 154 17.156 18.766 26.377 1.00122.87 ATOM 199 CB HIS C 154 15.605 20.856 27.223 1.00123.59 ATOM 200 CG HIS C 154 15.081 21.860 28.204 1.00124.15 ATOM 201 ND1 HIS C 154 13.782 21.842 28.665 1.00124.84 ATOM 202 CD2 HIS C 154 15.689 22.890 28.839 1.00124.57 ATOM 203 CE1 HIS C 154 13.612 22.815 29.542 1.00124.84 ATOM 204 NE2 HIS C 154 14.754 23.466 29.666 1.00124.84 ATOM 205 N CYS C 155 18.703 20.055 25.368 1.00123.37 ATOM 206 CA CYS C 155 19.390 18.939 24.724 1.00123.83 ATOM 207 C CYS C 155 20.526 18.439 25.606 1.00123.23 ATOM 208 O CYS C 155 20.837 19.045 26.629 1.00123.39 ATOM 209 CB CYS C 155 19.948 19.368 23.364 1.00124.71 ATOM 210 SG CYS C 155 20.845 18.070 22.455 1.00126.14 ATOM 211 N GLU C 156 21.145 17.336 25.199 1.00122.69 ATOM 212 CA GLU C 156 22.238 16.740 25.956 1.00122.61 ATOM 213 C GLU C 156 23.362 16.264 25.045 1.00121.88 ATOM 214 O GLU C 156 24.016 15.256 25.320 1.00121.63 ATOM 215 CB GLU C 156 21.714 15.569 26.793 1.00123.68 ATOM 216 CG GLU C 156 20.745 14.659 26.051 1.00124.91 ATOM 217 CD GLU C 156 19.490 15.390 25.608 1.00125.68 ATOM 218 OE1 GLU C 156 18.785 15.944 26.479 1.00125.92 ATOM 219 OE2 GLU C 156 19.213 15.418 24.391 1.00125.71 ATOM 220 N PHE C 157 23.576 17.001 23.959 1.00120.99 ATOM 221 CA PHE C 157 24.616 16.684 22.988 1.00119.73 ATOM 222 C PHE C 157 25.323 17.964 22.535 1.00119.64 ATOM 223 O PHE C 157 25.244 18.977 23.264 1.00119.47 ATOM 224 CB PHE C 157 24.022 15.976 21.766 1.00118.82 ATOM 225 CG PHE C 157 23.330 14.675 22.078 1.00117.32 ATOM 226 CD1 PHE C 157 22.127 14.655 22.770 1.00117.26 ATOM 227 CD2 PHE C 157 23.861 13.469 21.630 1.00117.10 ATOM 228 CE1 PHE C 157 21.460 13.454 23.005 1.00117.56 ATOM 229 CE2 PHE C 157 23.202 12.266 21.859 1.00116.67 ATOM 230 CZ PHE C 157 21.999 12.260 22.546 1.00117.06 ATOM 231 ZN ZN C 306 18.536 16.669 20.812 1.00132.53 TER