HEADER VIRUS/IMMUNE SYSTEM 10-APR-13 3J3P TITLE Conformational Shift of a Major Poliovirus Antigen Confirmed by TITLE 2 Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab COMPND MOL_ID: 5; COMPND 2 MOLECULE: Protein VP3; COMPND 3 CHAIN: 3; COMPND 4 FRAGMENT: UNP residues ; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR 3 13 DBREF 3J3P 3 1 238 UNP P03300 POLG_POL1M 342 579 SEQRES 1 3 231 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 3 231 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 231 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 3 231 VAL LYS ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 3 231 ILE PRO PHE ASP LEU SER ALA THR LYS LYS ASN THR MET SEQRES 6 3 231 GLU MET TYR ARG VAL ARG LEU SER ASP LYS PRO HIS THR SEQRES 7 3 231 ASP ASP PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 3 231 ASP PRO ARG LEU SER HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 3 231 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 3 231 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 3 231 LEU VAL SER TYR ALA PRO PRO GLY ALA ASP PRO PRO LYS SEQRES 12 3 231 LYS ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 231 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 3 231 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASP ASP SEQRES 15 3 231 SER PHE THR GLU GLY GLY TYR ILE SER VAL PHE TYR GLN SEQRES 16 3 231 THR ARG ILE VAL VAL PRO LEU SER THR PRO ARG GLU MET SEQRES 17 3 231 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 231 VAL ARG LEU LEU ARG ASP THR THR HIS ILE ATOM 1 CA GLY 3 1 -2.782 73.564 102.287 1.00 0.00 ATOM 2 CA LEU 3 2 -3.969 69.927 102.361 1.00 0.00 ATOM 3 CA PRO 3 3 -6.657 69.313 104.946 1.00 0.00 ATOM 4 CA VAL 3 4 -5.433 67.294 107.834 1.00 0.00 ATOM 5 CA MET 3 5 -6.608 66.164 111.218 1.00 0.00 ATOM 6 CA ASN 3 6 -4.429 65.231 114.137 1.00 0.00 ATOM 7 CA THR 3 7 -4.946 61.920 115.917 1.00 0.00 ATOM 8 CA PRO 3 8 -4.033 60.587 119.344 1.00 0.00 ATOM 9 CA GLY 3 9 -0.301 59.926 119.850 1.00 0.00 ATOM 10 CA SER 3 10 0.404 63.236 118.137 1.00 0.00 ATOM 11 CA ASN 3 11 3.585 64.906 119.391 1.00 0.00 ATOM 12 CA GLN 3 12 4.339 62.137 121.805 1.00 0.00 ATOM 13 CA LEU 3 14 6.617 55.406 122.990 1.00 0.00 ATOM 14 CA THR 3 15 10.105 53.946 123.414 1.00 0.00 ATOM 15 CA ALA 3 16 9.178 50.981 121.248 1.00 0.00 ATOM 16 CA ASP 3 17 7.933 53.138 118.356 1.00 0.00 ATOM 17 CA ASN 3 18 9.339 52.906 114.845 1.00 0.00 ATOM 18 CA PHE 3 19 9.145 56.197 112.992 1.00 0.00 ATOM 19 CA GLN 3 20 11.240 58.245 110.666 1.00 0.00 ATOM 20 CA SER 3 21 13.145 61.264 111.990 1.00 0.00 ATOM 21 CA PRO 3 22 15.392 63.995 110.428 1.00 0.00 ATOM 22 CA CYS 3 23 19.115 63.266 110.094 1.00 0.00 ATOM 23 CA ALA 3 24 21.523 65.524 112.082 1.00 0.00 ATOM 24 CA LEU 3 25 24.402 64.712 109.689 1.00 0.00 ATOM 25 CA PRO 3 26 22.979 64.862 106.121 1.00 0.00 ATOM 26 CA GLU 3 27 25.140 63.511 103.288 1.00 0.00 ATOM 27 CA PHE 3 28 27.614 62.020 105.751 1.00 0.00 ATOM 28 CA ASP 3 29 30.136 59.803 103.970 1.00 0.00 ATOM 29 CA VAL 3 30 29.439 56.495 105.728 1.00 0.00 ATOM 30 CA THR 3 31 32.210 53.921 106.007 1.00 0.00 ATOM 31 CA PRO 3 32 31.161 50.691 104.216 1.00 0.00 ATOM 32 CA PRO 3 33 30.995 47.316 106.025 1.00 0.00 ATOM 33 CA ILE 3 34 33.666 44.696 105.605 1.00 0.00 ATOM 34 CA ASP 3 35 32.931 40.983 105.937 1.00 0.00 ATOM 35 CA ILE 3 36 33.780 40.454 109.594 1.00 0.00 ATOM 36 CA PRO 3 37 33.629 36.761 110.604 1.00 0.00 ATOM 37 CA GLY 3 38 30.991 35.755 113.161 1.00 0.00 ATOM 38 CA GLU 3 39 27.890 37.763 112.197 1.00 0.00 ATOM 39 CA VAL 3 40 24.759 36.891 114.210 1.00 0.00 ATOM 40 CA LYS 3 41 21.207 37.309 112.798 1.00 0.00 ATOM 41 CA ASN 3 42 18.998 36.100 115.687 1.00 0.00 ATOM 42 CA MET 3 43 19.530 35.757 119.476 1.00 0.00 ATOM 43 CA MET 3 44 18.280 32.163 119.321 1.00 0.00 ATOM 44 CA GLU 3 45 21.435 31.229 117.379 1.00 0.00 ATOM 45 CA LEU 3 46 23.337 31.944 120.615 1.00 0.00 ATOM 46 CA ALA 3 47 20.820 29.878 122.580 1.00 0.00 ATOM 47 CA GLU 3 48 21.587 26.870 120.354 1.00 0.00 ATOM 48 CA ILE 3 49 25.258 26.851 121.475 1.00 0.00 ATOM 49 CA ASP 3 50 29.254 23.085 124.441 1.00 0.00 ATOM 50 CA THR 3 51 29.965 25.159 127.533 1.00 0.00 ATOM 51 CA MET 3 52 31.262 23.786 130.867 1.00 0.00 ATOM 52 CA ILE 3 53 28.820 23.517 133.783 1.00 0.00 ATOM 53 CA PRO 3 54 29.697 24.843 137.282 1.00 0.00 ATOM 54 CA PHE 3 55 28.000 21.885 139.029 1.00 0.00 ATOM 55 CA ASP 3 56 29.543 22.162 142.491 1.00 0.00 ATOM 56 CA LEU 3 57 28.328 25.559 143.744 1.00 0.00 ATOM 57 CA SER 3 58 28.905 24.557 147.378 1.00 0.00 ATOM 58 CA ALA 3 59 29.738 27.371 149.867 1.00 0.00 ATOM 59 CA THR 3 60 33.507 26.775 149.562 1.00 0.00 ATOM 60 CA LYS 3 61 33.874 25.665 145.914 1.00 0.00 ATOM 61 CA LYS 3 62 31.673 28.294 144.301 1.00 0.00 ATOM 62 CA ASN 3 63 33.326 31.186 142.435 1.00 0.00 ATOM 63 CA THR 3 64 36.566 29.178 142.139 1.00 0.00 ATOM 64 CA MET 3 65 38.061 26.768 139.532 1.00 0.00 ATOM 65 CA GLU 3 66 36.719 23.906 141.659 1.00 0.00 ATOM 66 CA MET 3 67 32.986 24.518 141.030 1.00 0.00 ATOM 67 CA TYR 3 68 33.464 22.888 137.595 1.00 0.00 ATOM 68 CA ARG 3 69 34.832 19.603 138.959 1.00 0.00 ATOM 69 CA VAL 3 70 32.480 16.753 139.874 1.00 0.00 ATOM 70 CA ARG 3 71 34.570 14.432 142.030 1.00 0.00 ATOM 71 CA LEU 3 72 34.186 10.634 141.861 1.00 0.00 ATOM 72 CA SER 3 73 35.838 7.614 143.533 1.00 0.00 ATOM 73 CA ASP 3 74 36.774 3.894 143.554 1.00 0.00 ATOM 74 CA LYS 3 75 34.282 3.310 146.345 1.00 0.00 ATOM 75 CA PRO 3 76 31.484 0.721 146.620 1.00 0.00 ATOM 76 CA HIS 3 77 28.344 0.573 144.606 1.00 0.00 ATOM 77 CA THR 3 78 25.768 2.898 146.048 1.00 0.00 ATOM 78 CA ASP 3 79 22.374 3.766 144.568 1.00 0.00 ATOM 79 CA ASP 3 80 22.695 7.372 145.730 1.00 0.00 ATOM 80 CA PRO 3 81 23.084 10.371 143.367 1.00 0.00 ATOM 81 CA ILE 3 82 26.457 11.770 142.332 1.00 0.00 ATOM 82 CA LEU 3 83 24.706 14.978 141.294 1.00 0.00 ATOM 83 CA CYS 3 84 21.140 16.303 141.140 1.00 0.00 ATOM 84 CA LEU 3 85 20.087 19.245 138.907 1.00 0.00 ATOM 85 CA SER 3 86 16.827 20.895 137.766 1.00 0.00 ATOM 86 CA LEU 3 87 15.994 21.495 134.094 1.00 0.00 ATOM 87 CA SER 3 88 15.583 25.241 134.408 1.00 0.00 ATOM 88 CA PRO 3 89 18.341 26.360 132.007 1.00 0.00 ATOM 89 CA ALA 3 90 17.939 30.108 132.494 1.00 0.00 ATOM 90 CA SER 3 91 17.136 30.129 136.246 1.00 0.00 ATOM 91 CA ASP 3 92 18.927 27.173 137.932 1.00 0.00 ATOM 92 CA PRO 3 93 22.297 28.624 139.194 1.00 0.00 ATOM 93 CA ARG 3 94 24.406 25.806 137.722 1.00 0.00 ATOM 94 CA LEU 3 95 23.004 26.434 134.225 1.00 0.00 ATOM 95 CA SER 3 96 22.046 30.181 134.373 1.00 0.00 ATOM 96 CA HIS 3 97 25.666 31.301 133.858 1.00 0.00 ATOM 97 CA THR 3 98 26.706 28.949 131.027 1.00 0.00 ATOM 98 CA MET 3 99 26.790 30.422 127.444 1.00 0.00 ATOM 99 CA LEU 3 100 23.368 28.812 126.853 1.00 0.00 ATOM 100 CA GLY 3 101 21.901 30.091 130.165 1.00 0.00 ATOM 101 CA GLU 3 102 23.311 33.573 129.500 1.00 0.00 ATOM 102 CA ILE 3 103 21.730 33.910 126.021 1.00 0.00 ATOM 103 CA LEU 3 104 18.449 32.573 127.467 1.00 0.00 ATOM 104 CA ASN 3 105 18.432 35.426 130.022 1.00 0.00 ATOM 105 CA TYR 3 106 18.023 37.950 127.178 1.00 0.00 ATOM 106 CA TYR 3 107 14.774 36.171 126.230 1.00 0.00 ATOM 107 CA THR 3 108 11.483 35.366 128.012 1.00 0.00 ATOM 108 CA HIS 3 109 10.722 32.028 126.341 1.00 0.00 ATOM 109 CA TRP 3 110 12.673 28.892 125.452 1.00 0.00 ATOM 110 CA ALA 3 111 11.937 25.709 123.511 1.00 0.00 ATOM 111 CA GLY 3 112 13.695 22.600 122.275 1.00 0.00 ATOM 112 CA SER 3 113 16.014 19.749 123.049 1.00 0.00 ATOM 113 CA LEU 3 114 19.201 20.101 125.068 1.00 0.00 ATOM 114 CA LYS 3 115 22.251 17.862 125.269 1.00 0.00 ATOM 115 CA PHE 3 116 24.487 17.124 128.198 1.00 0.00 ATOM 116 CA THR 3 117 28.010 15.863 127.585 1.00 0.00 ATOM 117 CA PHE 3 118 30.184 14.338 130.315 1.00 0.00 ATOM 118 CA LEU 3 119 33.975 14.085 130.200 1.00 0.00 ATOM 119 CA PHE 3 120 35.936 11.552 132.275 1.00 0.00 ATOM 120 CA CYS 3 121 39.170 13.140 133.545 1.00 0.00 ATOM 121 CA GLY 3 122 40.432 10.116 135.435 1.00 0.00 ATOM 122 CA SER 3 123 43.440 7.897 134.600 1.00 0.00 ATOM 123 CA MET 3 124 43.507 5.543 131.556 1.00 0.00 ATOM 124 CA MET 3 125 43.683 2.608 133.997 1.00 0.00 ATOM 125 CA ALA 3 126 40.395 3.616 135.663 1.00 0.00 ATOM 126 CA THR 3 127 37.220 1.864 134.555 1.00 0.00 ATOM 127 CA GLY 3 128 33.534 2.337 135.342 1.00 0.00 ATOM 128 CA LYS 3 129 29.880 2.470 134.403 1.00 0.00 ATOM 129 CA LEU 3 130 27.654 5.456 135.143 1.00 0.00 ATOM 130 CA LEU 3 131 23.930 6.132 134.741 1.00 0.00 ATOM 131 CA VAL 3 132 22.813 9.511 133.397 1.00 0.00 ATOM 132 CA SER 3 133 19.120 10.329 133.877 1.00 0.00 ATOM 133 CA TYR 3 134 16.383 12.693 132.839 1.00 0.00 ATOM 134 CA ALA 3 135 13.025 12.631 134.545 1.00 0.00 ATOM 135 CA PRO 3 136 10.146 14.719 133.134 1.00 0.00 ATOM 136 CA PRO 3 137 8.330 16.827 135.763 1.00 0.00 ATOM 137 CA GLY 3 138 5.322 15.805 137.866 1.00 0.00 ATOM 138 CA ALA 3 139 6.510 13.051 140.159 1.00 0.00 ATOM 139 CA ASP 3 140 8.961 12.848 143.068 1.00 0.00 ATOM 140 CA PRO 3 141 12.482 13.951 141.957 1.00 0.00 ATOM 141 CA PRO 3 142 14.768 10.913 141.812 1.00 0.00 ATOM 142 CA LYS 3 143 16.943 10.358 144.908 1.00 0.00 ATOM 143 CA LYS 3 144 17.801 6.766 143.943 1.00 0.00 ATOM 144 CA ARG 3 145 19.110 4.915 140.895 1.00 0.00 ATOM 145 CA LYS 3 146 15.948 2.779 141.007 1.00 0.00 ATOM 146 CA GLU 3 147 13.657 5.780 140.383 1.00 0.00 ATOM 147 CA ALA 3 148 16.071 7.488 137.978 1.00 0.00 ATOM 148 CA MET 3 149 16.417 4.280 135.921 1.00 0.00 ATOM 149 CA LEU 3 150 12.657 4.470 135.167 1.00 0.00 ATOM 150 CA GLY 3 151 12.876 7.673 133.078 1.00 0.00 ATOM 151 CA THR 3 152 14.890 8.868 130.058 1.00 0.00 ATOM 152 CA HIS 3 153 18.449 7.645 130.559 1.00 0.00 ATOM 153 CA VAL 3 154 21.855 6.644 129.219 1.00 0.00 ATOM 154 CA ILE 3 155 24.200 3.991 130.616 1.00 0.00 ATOM 155 CA TRP 3 156 27.690 5.407 130.089 1.00 0.00 ATOM 156 CA ASP 3 157 30.579 2.973 129.880 1.00 0.00 ATOM 157 CA ILE 3 158 34.025 4.482 130.457 1.00 0.00 ATOM 158 CA GLY 3 159 36.709 3.666 127.866 1.00 0.00 ATOM 159 CA LEU 3 160 38.703 5.086 124.875 1.00 0.00 ATOM 160 CA GLN 3 161 35.858 7.399 123.899 1.00 0.00 ATOM 161 CA SER 3 162 36.482 9.819 126.787 1.00 0.00 ATOM 162 CA SER 3 163 33.046 11.414 126.835 1.00 0.00 ATOM 163 CA CYS 3 164 29.365 10.504 126.764 1.00 0.00 ATOM 164 CA THR 3 165 26.420 12.583 125.525 1.00 0.00 ATOM 165 CA MET 3 166 22.934 12.350 126.959 1.00 0.00 ATOM 166 CA VAL 3 167 20.188 14.083 125.018 1.00 0.00 ATOM 167 CA VAL 3 168 17.376 15.701 126.987 1.00 0.00 ATOM 168 CA PRO 3 169 14.406 15.651 124.568 1.00 0.00 ATOM 169 CA TRP 3 170 11.851 18.423 124.237 1.00 0.00 ATOM 170 CA ILE 3 171 9.110 17.137 126.488 1.00 0.00 ATOM 171 CA SER 3 172 6.646 19.852 127.455 1.00 0.00 ATOM 172 CA ASN 3 173 2.978 20.652 127.852 1.00 0.00 ATOM 173 CA THR 3 174 3.463 24.263 126.728 1.00 0.00 ATOM 174 CA THR 3 175 4.938 25.164 123.286 1.00 0.00 ATOM 175 CA TYR 3 176 7.486 27.336 125.034 1.00 0.00 ATOM 176 CA ARG 3 177 8.763 27.416 128.627 1.00 0.00 ATOM 177 CA GLN 3 178 9.573 30.511 130.715 1.00 0.00 ATOM 178 CA THR 3 179 13.181 31.571 131.326 1.00 0.00 ATOM 179 CA ILE 3 180 12.424 31.887 135.051 1.00 0.00 ATOM 180 CA ASP 3 181 11.511 29.393 137.810 1.00 0.00 ATOM 181 CA ASP 3 182 7.855 28.550 137.240 1.00 0.00 ATOM 182 CA SER 3 183 5.873 25.453 138.270 1.00 0.00 ATOM 183 CA PHE 3 184 3.581 25.595 135.223 1.00 0.00 ATOM 184 CA THR 3 185 6.525 25.533 132.803 1.00 0.00 ATOM 185 CA GLU 3 186 8.724 23.218 134.859 1.00 0.00 ATOM 186 CA GLY 3 187 11.236 20.993 132.984 1.00 0.00 ATOM 187 CA GLY 3 188 12.087 18.005 135.219 1.00 0.00 ATOM 188 CA TYR 3 189 15.130 16.453 136.798 1.00 0.00 ATOM 189 CA ILE 3 190 18.650 15.614 135.654 1.00 0.00 ATOM 190 CA SER 3 191 20.507 13.151 137.879 1.00 0.00 ATOM 191 CA VAL 3 192 23.703 11.079 137.732 1.00 0.00 ATOM 192 CA PHE 3 193 24.605 7.719 139.291 1.00 0.00 ATOM 193 CA TYR 3 194 27.032 4.832 139.709 1.00 0.00 ATOM 194 CA GLN 3 195 25.740 1.906 137.520 1.00 0.00 ATOM 195 CA THR 3 196 28.451 -0.422 138.813 1.00 0.00 ATOM 196 CA ARG 3 197 31.403 1.460 140.413 1.00 0.00 ATOM 197 CA ILE 3 198 34.644 3.235 139.496 1.00 0.00 ATOM 198 CA VAL 3 199 37.381 0.597 139.512 1.00 0.00 ATOM 199 CA VAL 3 200 41.121 1.150 139.686 1.00 0.00 ATOM 200 CA PRO 3 201 44.160 -1.110 140.042 1.00 0.00 ATOM 201 CA LEU 3 202 46.999 -0.340 142.457 1.00 0.00 ATOM 202 CA SER 3 203 49.482 2.576 142.129 1.00 0.00 ATOM 203 CA THR 3 204 46.548 4.519 140.681 1.00 0.00 ATOM 204 CA PRO 3 205 44.479 7.483 141.997 1.00 0.00 ATOM 205 CA ARG 3 206 41.302 6.381 143.756 1.00 0.00 ATOM 206 CA GLU 3 207 39.703 9.725 143.034 1.00 0.00 ATOM 207 CA MET 3 208 39.102 11.583 139.853 1.00 0.00 ATOM 208 CA ASP 3 209 37.078 14.399 138.395 1.00 0.00 ATOM 209 CA ILE 3 210 34.443 14.451 135.706 1.00 0.00 ATOM 210 CA LEU 3 211 33.517 17.578 133.794 1.00 0.00 ATOM 211 CA GLY 3 212 30.104 18.380 132.338 1.00 0.00 ATOM 212 CA PHE 3 213 28.980 20.373 129.323 1.00 0.00 ATOM 213 CA VAL 3 214 25.660 21.671 128.018 1.00 0.00 ATOM 214 CA SER 3 215 24.502 22.771 124.583 1.00 0.00 ATOM 215 CA ALA 3 216 21.399 23.136 122.402 1.00 0.00 ATOM 216 CA CYS 3 217 20.168 20.429 119.979 1.00 0.00 ATOM 217 CA ASN 3 218 19.246 22.172 116.599 1.00 0.00 ATOM 218 CA ASP 3 219 15.438 22.082 117.236 1.00 0.00 ATOM 219 CA PHE 3 220 16.025 24.779 119.824 1.00 0.00 ATOM 220 CA SER 3 221 14.796 28.346 119.800 1.00 0.00 ATOM 221 CA VAL 3 222 14.148 31.366 121.954 1.00 0.00 ATOM 222 CA ARG 3 223 11.751 34.297 121.854 1.00 0.00 ATOM 223 CA LEU 3 224 10.467 37.584 123.305 1.00 0.00 ATOM 224 CA LEU 3 225 13.614 39.665 123.693 1.00 0.00 ATOM 225 CA ARG 3 226 14.261 41.139 127.141 1.00 0.00 ATOM 226 CA ASP 3 227 16.720 42.840 129.476 1.00 0.00 ATOM 227 CA THR 3 228 18.776 40.474 131.603 1.00 0.00 ATOM 228 CA THR 3 229 19.286 40.425 135.365 1.00 0.00 ATOM 229 CA HIS 3 230 22.847 39.067 134.963 1.00 0.00 ATOM 230 CA ILE 3 231 24.494 42.501 134.808 1.00 0.00 TER