HEADER VIRUS 28-JUN-13 3J48 TITLE Cryo-EM structure of Poliovirus 135S particles COMPND MOL_ID: 2; COMPND 2 MOLECULE: Protein VP2; COMPND 3 CHAIN: 2; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER 2 45 REMARK 465 GLU 2 46 REMARK 465 ALA 2 47 REMARK 465 ASN 2 48 REMARK 465 PRO 2 49 REMARK 465 VAL 2 50 REMARK 465 ASP 2 51 REMARK 465 GLN 2 52 REMARK 465 PRO 2 53 REMARK 465 THR 2 54 REMARK 465 GLU 2 55 REMARK 465 PRO 2 56 REMARK 465 ASP 2 57 REMARK 465 THR 2 158 REMARK 465 GLY 2 159 REMARK 465 THR 2 160 REMARK 465 PHE 2 161 REMARK 465 THR 2 162 REMARK 465 PRO 2 163 REMARK 465 ASP 2 164 REMARK 465 ASN 2 165 REMARK 465 ASN 2 166 REMARK 465 GLN 2 167 REMARK 465 THR 2 168 REMARK 465 SER 2 169 REMARK 465 PRO 2 170 REMARK 465 ALA 2 171 REMARK 465 ARG 2 172 DBREF 3J48 2 1 272 UNP P03300 POLG_POL1M 70 341 SEQRES 1 2 252 LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 2 2 252 GLU ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO SEQRES 3 2 252 GLU TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN SEQRES 4 2 252 PRO THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR SEQRES 5 2 252 LEU ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP SEQRES 6 2 252 TRP TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU SEQRES 7 2 252 PHE GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER SEQRES 8 2 252 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 9 2 252 HIS GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET SEQRES 10 2 252 CYS LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SEQRES 11 2 252 SER TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR SEQRES 12 2 252 PHE THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER SEQRES 13 2 252 PRO ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY SEQRES 14 2 252 ASN GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS SEQRES 15 2 252 GLN ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU SEQRES 16 2 252 VAL LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET SEQRES 17 2 252 VAL LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU SEQRES 18 2 252 ALA PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE SEQRES 19 2 252 PRO ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE SEQRES 20 2 252 ASN GLY LEU ARG ASN ATOM 1 CA LEU 2 14 25.976 2.386 117.317 0.50 10.00 ATOM 2 CA GLN 2 15 22.796 3.324 119.223 0.50 10.00 ATOM 3 CA LEU 2 16 20.515 0.349 120.276 0.50 10.00 ATOM 4 CA THR 2 17 17.069 1.908 121.135 0.50 10.00 ATOM 5 CA LEU 2 18 13.575 0.733 122.346 0.50 10.00 ATOM 6 CA GLY 2 19 10.933 3.350 123.305 0.50 10.00 ATOM 7 CA ASN 2 20 12.679 5.914 125.620 0.50 10.00 ATOM 8 CA SER 2 21 15.364 3.364 126.535 0.50 10.00 ATOM 9 CA THR 2 22 18.692 3.276 124.573 0.50 10.00 ATOM 10 CA ILE 2 23 22.031 1.393 124.585 0.50 10.00 ATOM 11 CA THR 2 24 25.137 3.215 123.071 0.50 10.00 ATOM 12 CA THR 2 25 27.213 0.299 121.500 0.50 10.00 ATOM 13 CA GLN 2 26 30.448 -0.035 119.447 0.50 10.00 ATOM 14 CA GLU 2 27 30.552 -3.661 120.508 0.50 10.00 ATOM 15 CA ALA 2 28 42.194 17.561 112.427 1.00 10.00 ATOM 16 CA ALA 2 29 38.590 17.015 113.617 1.00 10.00 ATOM 17 CA ASN 2 30 40.484 18.757 116.430 1.00 10.00 ATOM 18 CA SER 2 31 40.851 21.978 114.455 1.00 10.00 ATOM 19 CA VAL 2 32 38.726 25.089 114.402 1.00 10.00 ATOM 20 CA VAL 2 33 38.269 28.063 112.118 1.00 10.00 ATOM 21 CA ALA 2 34 37.345 31.054 114.254 1.00 10.00 ATOM 22 CA TYR 2 35 33.949 32.566 113.512 1.00 10.00 ATOM 23 CA GLY 2 36 33.791 30.238 110.520 1.00 10.00 ATOM 24 CA ARG 2 37 36.182 32.637 108.820 1.00 10.00 ATOM 25 CA TRP 2 38 39.371 31.830 107.097 1.00 10.00 ATOM 26 CA PRO 2 39 42.289 34.298 107.007 1.00 10.00 ATOM 27 CA GLU 2 40 42.356 36.634 104.020 1.00 10.00 ATOM 28 CA TYR 2 41 44.328 39.478 102.389 1.00 10.00 ATOM 29 CA LEU 2 42 43.368 43.076 103.022 1.00 10.00 ATOM 30 CA ARG 2 43 41.523 43.302 99.831 1.00 10.00 ATOM 31 CA ASP 2 44 39.859 45.393 97.345 1.00 10.00 ATOM 32 CA VAL 2 58 55.700 36.131 102.288 1.00 10.00 ATOM 33 CA ALA 2 59 58.060 33.724 104.153 1.00 10.00 ATOM 34 CA ALA 2 60 58.521 35.878 107.236 1.00 10.00 ATOM 35 CA CYS 2 61 55.002 34.612 107.841 1.00 10.00 ATOM 36 CA ARG 2 62 55.699 30.983 108.725 1.00 10.00 ATOM 37 CA PHE 2 63 55.600 28.583 111.699 1.00 10.00 ATOM 38 CA TYR 2 64 57.393 29.721 114.792 1.00 10.00 ATOM 39 CA THR 2 65 57.668 27.411 117.803 1.00 10.00 ATOM 40 CA LEU 2 66 57.693 29.183 121.156 1.00 10.00 ATOM 41 CA ASP 2 67 59.342 28.206 124.401 1.00 10.00 ATOM 42 CA THR 2 68 57.806 25.086 125.796 1.00 10.00 ATOM 43 CA VAL 2 69 55.901 25.296 129.052 1.00 10.00 ATOM 44 CA SER 2 70 55.182 22.677 131.723 1.00 10.00 ATOM 45 CA TRP 2 71 51.790 21.447 132.843 1.00 10.00 ATOM 46 CA THR 2 72 51.634 20.180 136.385 1.00 10.00 ATOM 47 CA LYS 2 73 49.072 19.000 138.926 1.00 10.00 ATOM 48 CA GLU 2 74 49.046 22.587 140.150 1.00 10.00 ATOM 49 CA SER 2 75 49.180 24.817 137.075 1.00 10.00 ATOM 50 CA ARG 2 76 46.299 27.323 136.920 1.00 10.00 ATOM 51 CA GLY 2 77 46.761 28.311 133.283 1.00 10.00 ATOM 52 CA TRP 2 78 48.725 30.277 130.687 1.00 10.00 ATOM 53 CA TRP 2 79 48.176 33.261 128.390 1.00 10.00 ATOM 54 CA TRP 2 80 49.780 34.925 125.429 1.00 10.00 ATOM 55 CA LYS 2 81 48.974 37.786 123.067 1.00 10.00 ATOM 56 CA LEU 2 82 49.223 38.204 119.299 1.00 10.00 ATOM 57 CA PRO 2 83 51.170 39.743 117.676 1.00 10.00 ATOM 58 CA ASP 2 84 53.180 40.268 120.865 1.00 10.00 ATOM 59 CA ALA 2 85 54.299 36.650 121.407 1.00 10.00 ATOM 60 CA LEU 2 86 55.841 36.700 117.953 1.00 10.00 ATOM 61 CA ARG 2 87 57.599 40.065 118.197 1.00 10.00 ATOM 62 CA ASP 2 88 61.076 38.510 118.133 1.00 10.00 ATOM 63 CA MET 2 89 60.485 35.798 115.591 1.00 10.00 ATOM 64 CA GLY 2 90 62.910 36.227 112.717 1.00 10.00 ATOM 65 CA LEU 2 91 61.829 38.335 109.756 1.00 10.00 ATOM 66 CA PHE 2 92 58.260 38.542 111.022 1.00 10.00 ATOM 67 CA GLY 2 93 59.310 40.544 114.030 1.00 10.00 ATOM 68 CA GLN 2 94 61.533 42.767 111.897 1.00 10.00 ATOM 69 CA ASN 2 95 58.735 43.497 109.500 1.00 10.00 ATOM 70 CA MET 2 96 56.507 44.355 112.404 1.00 10.00 ATOM 71 CA TYR 2 97 58.832 46.978 113.836 1.00 10.00 ATOM 72 CA TYR 2 98 59.896 48.537 110.490 1.00 10.00 ATOM 73 CA HIS 2 99 56.285 49.352 109.587 1.00 10.00 ATOM 74 CA TYR 2 100 53.629 51.681 110.992 1.00 10.00 ATOM 75 CA LEU 2 101 50.876 49.308 110.074 1.00 10.00 ATOM 76 CA GLY 2 102 50.524 45.593 109.818 1.00 10.00 ATOM 77 CA ARG 2 103 47.839 42.939 109.676 1.00 10.00 ATOM 78 CA SER 2 104 47.847 39.226 110.003 1.00 10.00 ATOM 79 CA GLY 2 105 45.831 36.185 110.752 1.00 10.00 ATOM 80 CA TYR 2 106 47.177 33.124 112.609 1.00 10.00 ATOM 81 CA THR 2 107 47.347 29.373 112.812 1.00 10.00 ATOM 82 CA VAL 2 108 47.763 28.345 116.435 1.00 10.00 ATOM 83 CA HIS 2 109 48.892 24.776 116.969 1.00 10.00 ATOM 84 CA VAL 2 110 48.872 23.625 120.624 1.00 10.00 ATOM 85 CA GLN 2 111 50.887 20.427 121.226 1.00 10.00 ATOM 86 CA CYS 2 112 50.515 18.309 124.359 1.00 10.00 ATOM 87 CA ASN 2 113 50.950 14.555 124.585 1.00 10.00 ATOM 88 CA ALA 2 114 50.687 12.045 127.407 1.00 10.00 ATOM 89 CA SER 2 115 50.130 8.266 127.945 1.00 10.00 ATOM 90 CA LYS 2 116 46.933 6.167 127.947 1.00 10.00 ATOM 91 CA PHE 2 117 47.271 6.120 131.705 1.00 10.00 ATOM 92 CA HIS 2 118 47.459 9.882 132.073 1.00 10.00 ATOM 93 CA GLN 2 119 44.370 12.071 132.330 1.00 10.00 ATOM 94 CA GLY 2 120 43.350 15.690 132.087 1.00 10.00 ATOM 95 CA ALA 2 121 41.782 18.306 129.865 1.00 10.00 ATOM 96 CA LEU 2 122 43.022 21.558 128.447 1.00 10.00 ATOM 97 CA GLY 2 123 40.712 24.348 127.364 1.00 10.00 ATOM 98 CA VAL 2 124 42.323 26.334 124.527 1.00 10.00 ATOM 99 CA PHE 2 125 40.646 29.692 124.056 1.00 10.00 ATOM 100 CA ALA 2 126 41.198 32.332 121.364 1.00 10.00 ATOM 101 CA VAL 2 127 39.889 35.683 122.642 1.00 10.00 ATOM 102 CA PRO 2 128 39.443 38.796 120.443 1.00 10.00 ATOM 103 CA GLU 2 129 40.507 42.033 122.258 1.00 10.00 ATOM 104 CA MET 2 130 41.456 40.068 125.362 1.00 10.00 ATOM 105 CA CYS 2 131 41.696 42.870 127.866 1.00 10.00 ATOM 106 CA LEU 2 132 42.878 41.551 131.205 1.00 10.00 ATOM 107 CA ALA 2 133 42.355 42.887 134.730 1.00 10.00 ATOM 108 CA GLY 2 134 45.066 44.659 136.717 1.00 10.00 ATOM 109 CA ASP 2 135 46.760 44.194 140.122 1.00 10.00 ATOM 110 CA SER 2 136 45.521 47.428 141.690 1.00 10.00 ATOM 111 CA ASN 2 137 42.567 48.332 143.821 1.00 10.00 ATOM 112 CA THR 2 138 43.413 51.986 144.291 1.00 10.00 ATOM 113 CA THR 2 139 43.706 52.906 140.601 1.00 10.00 ATOM 114 CA THR 2 140 42.357 51.406 137.334 1.00 10.00 ATOM 115 CA MET 2 141 43.501 50.660 133.744 1.00 10.00 ATOM 116 CA HIS 2 142 47.077 51.065 134.864 1.00 10.00 ATOM 117 CA THR 2 143 49.061 47.999 133.730 1.00 10.00 ATOM 118 CA SER 2 144 52.291 49.111 132.078 1.00 10.00 ATOM 119 CA TYR 2 145 53.024 48.461 128.376 1.00 10.00 ATOM 120 CA GLN 2 146 55.978 46.354 129.474 1.00 10.00 ATOM 121 CA ASN 2 147 53.920 44.164 131.717 1.00 10.00 ATOM 122 CA ALA 2 148 50.989 43.897 129.387 1.00 10.00 ATOM 123 CA ASN 2 149 53.276 42.628 126.680 1.00 10.00 ATOM 124 CA PRO 2 150 55.268 39.599 127.878 1.00 10.00 ATOM 125 CA GLY 2 151 56.432 38.535 124.478 1.00 10.00 ATOM 126 CA GLU 2 152 56.974 34.799 123.771 1.00 10.00 ATOM 127 CA LYS 2 153 57.649 34.193 127.414 1.00 10.00 ATOM 128 CA GLY 2 154 54.053 34.056 128.211 1.00 10.00 ATOM 129 CA GLY 2 155 52.174 35.381 131.157 1.00 10.00 ATOM 130 CA THR 2 156 50.166 33.169 133.565 1.00 10.00 ATOM 131 CA PHE 2 157 46.800 32.771 135.368 1.00 10.00 ATOM 132 CA ARG 2 173 50.749 44.653 136.236 1.00 10.00 ATOM 133 CA PHE 2 174 47.899 42.207 135.553 1.00 10.00 ATOM 134 CA CYS 2 175 46.327 39.911 138.093 1.00 10.00 ATOM 135 CA PRO 2 176 44.373 37.337 136.068 1.00 10.00 ATOM 136 CA VAL 2 177 42.030 35.123 138.133 1.00 10.00 ATOM 137 CA ASP 2 178 41.403 31.783 136.411 1.00 10.00 ATOM 138 CA TYR 2 179 37.678 31.214 137.114 1.00 10.00 ATOM 139 CA LEU 2 180 37.030 34.780 135.939 1.00 10.00 ATOM 140 CA LEU 2 181 39.049 34.449 132.714 1.00 10.00 ATOM 141 CA GLY 2 182 41.236 37.223 134.082 1.00 10.00 ATOM 142 CA ASN 2 183 38.557 39.680 132.900 1.00 10.00 ATOM 143 CA GLY 2 184 35.531 39.651 135.199 1.00 10.00 ATOM 144 CA THR 2 185 33.561 37.010 133.337 1.00 10.00 ATOM 145 CA LEU 2 186 33.014 33.341 134.280 1.00 10.00 ATOM 146 CA LEU 2 187 35.408 30.792 132.762 1.00 10.00 ATOM 147 CA GLY 2 188 32.575 28.337 132.178 1.00 10.00 ATOM 148 CA ASN 2 189 31.264 30.695 129.532 1.00 10.00 ATOM 149 CA ALA 2 190 34.622 31.225 127.773 1.00 10.00 ATOM 150 CA PHE 2 191 33.401 28.747 125.192 1.00 10.00 ATOM 151 CA VAL 2 192 31.371 31.450 123.412 1.00 10.00 ATOM 152 CA PHE 2 193 34.855 32.372 122.122 1.00 10.00 ATOM 153 CA PRO 2 194 36.644 30.507 119.266 1.00 10.00 ATOM 154 CA HIS 2 195 38.086 27.511 121.044 1.00 10.00 ATOM 155 CA GLN 2 196 39.180 23.931 121.191 1.00 10.00 ATOM 156 CA ILE 2 197 39.636 21.239 123.860 1.00 10.00 ATOM 157 CA ILE 2 198 42.567 18.915 124.382 1.00 10.00 ATOM 158 CA ASN 2 199 41.286 15.867 126.150 1.00 10.00 ATOM 159 CA LEU 2 200 44.287 13.704 127.001 1.00 10.00 ATOM 160 CA ARG 2 201 42.102 10.617 126.598 1.00 10.00 ATOM 161 CA THR 2 202 41.179 11.340 122.986 1.00 10.00 ATOM 162 CA ASN 2 203 43.660 13.812 121.482 1.00 10.00 ATOM 163 CA ASN 2 204 47.125 15.275 121.940 1.00 10.00 ATOM 164 CA CYS 2 205 46.899 18.509 119.992 1.00 10.00 ATOM 165 CA ALA 2 206 44.672 21.381 118.952 1.00 10.00 ATOM 166 CA THR 2 207 44.685 23.671 115.933 1.00 10.00 ATOM 167 CA LEU 2 208 43.022 27.044 115.814 1.00 10.00 ATOM 168 CA VAL 2 209 42.816 28.998 112.564 1.00 10.00 ATOM 169 CA LEU 2 210 42.391 32.662 113.447 1.00 10.00 ATOM 170 CA PRO 2 211 41.253 35.443 111.087 1.00 10.00 ATOM 171 CA TYR 2 212 42.324 39.105 111.448 1.00 10.00 ATOM 172 CA VAL 2 213 39.672 40.533 113.745 1.00 10.00 ATOM 173 CA ASN 2 214 39.376 44.236 114.443 1.00 10.00 ATOM 174 CA SER 2 215 37.334 47.461 114.269 1.00 10.00 ATOM 175 CA LEU 2 216 39.750 48.487 111.467 1.00 10.00 ATOM 176 CA SER 2 217 41.120 46.945 108.232 1.00 10.00 ATOM 177 CA ILE 2 218 44.658 47.410 109.461 1.00 10.00 ATOM 178 CA ASP 2 219 46.288 48.794 112.608 1.00 10.00 ATOM 179 CA SER 2 220 49.465 49.296 114.654 1.00 10.00 ATOM 180 CA MET 2 221 50.895 45.910 115.617 1.00 10.00 ATOM 181 CA VAL 2 222 53.098 47.558 118.229 1.00 10.00 ATOM 182 CA LYS 2 223 50.383 49.476 120.082 1.00 10.00 ATOM 183 CA HIS 2 224 47.637 46.931 119.774 1.00 10.00 ATOM 184 CA ASN 2 225 47.200 43.229 120.305 1.00 10.00 ATOM 185 CA ASN 2 226 44.371 41.619 118.322 1.00 10.00 ATOM 186 CA TRP 2 227 44.010 38.140 119.703 1.00 10.00 ATOM 187 CA GLY 2 228 44.636 36.563 123.081 1.00 10.00 ATOM 188 CA ILE 2 229 45.481 32.873 123.556 1.00 10.00 ATOM 189 CA ALA 2 230 44.270 31.441 126.843 1.00 10.00 ATOM 190 CA ILE 2 231 45.040 27.901 127.957 1.00 10.00 ATOM 191 CA LEU 2 232 43.400 26.587 131.083 1.00 10.00 ATOM 192 CA PRO 2 233 43.148 23.189 132.797 1.00 10.00 ATOM 193 CA LEU 2 234 39.434 22.359 132.561 1.00 10.00 ATOM 194 CA ALA 2 235 40.297 19.074 134.162 1.00 10.00 ATOM 195 CA PRO 2 236 43.501 18.703 136.241 1.00 10.00 ATOM 196 CA LEU 2 237 46.508 16.660 135.151 1.00 10.00 ATOM 197 CA ASN 2 238 46.704 13.263 136.653 1.00 10.00 ATOM 198 CA PHE 2 239 48.854 10.242 136.243 1.00 10.00 ATOM 199 CA ALA 2 240 49.488 6.896 138.506 1.00 10.00 ATOM 200 CA SER 2 241 53.117 6.912 139.703 1.00 10.00 ATOM 201 CA GLU 2 242 53.743 10.280 137.867 1.00 10.00 ATOM 202 CA SER 2 243 50.344 12.225 137.925 1.00 10.00 ATOM 203 CA SER 2 244 51.653 15.663 136.902 1.00 10.00 ATOM 204 CA PRO 2 245 54.767 14.656 134.982 1.00 10.00 ATOM 205 CA GLU 2 246 54.254 16.739 134.677 1.00 10.00 ATOM 206 CA ILE 2 247 53.813 17.059 130.958 1.00 10.00 ATOM 207 CA PRO 2 248 54.955 19.638 128.400 1.00 10.00 ATOM 208 CA ILE 2 249 52.764 21.951 126.353 1.00 10.00 ATOM 209 CA THR 2 250 54.354 23.336 123.201 1.00 10.00 ATOM 210 CA LEU 2 251 52.898 26.162 121.139 1.00 10.00 ATOM 211 CA THR 2 252 53.729 26.462 117.430 1.00 10.00 ATOM 212 CA ILE 2 253 52.208 29.584 115.811 1.00 10.00 ATOM 213 CA ALA 2 254 52.191 30.876 112.241 1.00 10.00 ATOM 214 CA PRO 2 255 51.069 34.288 110.935 1.00 10.00 ATOM 215 CA MET 2 256 48.754 34.100 107.934 1.00 10.00 ATOM 216 CA CYS 2 257 47.729 36.067 104.799 1.00 10.00 ATOM 217 CA CYS 2 258 49.887 38.736 106.302 1.00 10.00 ATOM 218 CA GLU 2 259 50.695 42.195 105.228 1.00 10.00 ATOM 219 CA PHE 2 260 52.540 45.277 106.329 1.00 10.00 ATOM 220 CA ASN 2 261 52.549 48.950 105.531 1.00 10.00 ATOM 221 CA GLY 2 262 54.134 52.333 106.086 1.00 10.00 ATOM 222 CA LEU 2 263 57.821 51.538 106.012 1.00 10.00 ATOM 223 CA ARG 2 264 60.302 53.728 107.840 1.00 10.00 ATOM 224 CA ASN 2 265 63.116 53.606 110.451 1.00 10.00 TER