HEADER RIBOSOME 22-NOV-13 3J61 TITLE Localization of the large subunit ribosomal proteins into a 5.5 A TITLE 2 cryo-EM map of Triticum aestivum translating 80S ribosome COMPND MOL_ID: 40; COMPND 2 MOLECULE: 60S ribosomal protein L41E; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 3J61 n 1 25 PDB 3J61 3J61 1 25 SEQRES 1 n 25 MET ARG ALA LYS TRP LYS LYS LYS ARG MET ARG ARG LEU SEQRES 2 n 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET n 1 -29.370 36.084 29.627 1.00 0.00 ATOM 2 CA MET n 1 -29.853 34.688 29.796 1.00 0.00 ATOM 3 C MET n 1 -29.968 33.973 28.473 1.00 0.00 ATOM 4 O MET n 1 -29.584 34.503 27.429 1.00 0.00 ATOM 5 CB MET n 1 -31.182 34.674 30.598 1.00 0.00 ATOM 6 CG MET n 1 -32.367 35.393 29.919 1.00 0.00 ATOM 7 SD MET n 1 -33.748 35.803 31.039 1.00 0.00 ATOM 8 CE MET n 1 -34.172 34.122 31.583 1.00 0.00 ATOM 9 N ARG n 2 -30.469 32.715 28.501 1.00 0.00 ATOM 10 CA ARG n 2 -30.482 31.824 27.366 1.00 0.00 ATOM 11 C ARG n 2 -31.900 31.368 27.208 1.00 0.00 ATOM 12 O ARG n 2 -32.592 31.095 28.188 1.00 0.00 ATOM 13 CB ARG n 2 -29.527 30.628 27.564 1.00 0.00 ATOM 14 CG ARG n 2 -29.421 29.639 26.397 1.00 0.00 ATOM 15 CD ARG n 2 -28.243 28.676 26.600 1.00 0.00 ATOM 16 NE ARG n 2 -28.344 27.559 25.606 1.00 0.00 ATOM 17 CZ ARG n 2 -27.687 27.543 24.407 1.00 0.00 ATOM 18 NH1 ARG n 2 -26.901 28.582 24.004 1.00 0.00 ATOM 19 NH2 ARG n 2 -27.825 26.452 23.600 1.00 0.00 ATOM 20 N ALA n 3 -32.376 31.348 25.942 1.00 0.00 ATOM 21 CA ALA n 3 -33.774 31.286 25.610 1.00 0.00 ATOM 22 C ALA n 3 -34.293 29.871 25.576 1.00 0.00 ATOM 23 O ALA n 3 -34.801 29.375 26.581 1.00 0.00 ATOM 24 CB ALA n 3 -34.062 31.991 24.269 1.00 0.00 ATOM 25 N LYS n 4 -34.222 29.208 24.397 1.00 0.00 ATOM 26 CA LYS n 4 -35.143 28.159 24.027 1.00 0.00 ATOM 27 C LYS n 4 -34.389 27.196 23.156 1.00 0.00 ATOM 28 O LYS n 4 -33.185 27.332 22.946 1.00 0.00 ATOM 29 CB LYS n 4 -36.374 28.675 23.220 1.00 0.00 ATOM 30 CG LYS n 4 -37.287 29.677 23.958 1.00 0.00 ATOM 31 CD LYS n 4 -38.017 29.084 25.173 1.00 0.00 ATOM 32 CE LYS n 4 -38.827 30.117 25.968 1.00 0.00 ATOM 33 NZ LYS n 4 -39.463 29.490 27.151 1.00 0.00 ATOM 34 N TRP n 5 -35.106 26.149 22.676 1.00 0.00 ATOM 35 CA TRP n 5 -34.594 25.032 21.921 1.00 0.00 ATOM 36 C TRP n 5 -34.099 25.421 20.552 1.00 0.00 ATOM 37 O TRP n 5 -33.382 24.638 19.938 1.00 0.00 ATOM 38 CB TRP n 5 -35.622 23.878 21.754 1.00 0.00 ATOM 39 CG TRP n 5 -35.583 22.805 22.834 1.00 0.00 ATOM 40 CD1 TRP n 5 -35.474 22.930 24.191 1.00 0.00 ATOM 41 CD2 TRP n 5 -35.618 21.391 22.563 1.00 0.00 ATOM 42 NE1 TRP n 5 -35.461 21.692 24.790 1.00 0.00 ATOM 43 CE2 TRP n 5 -35.539 20.729 23.807 1.00 0.00 ATOM 44 CE3 TRP n 5 -35.709 20.673 21.372 1.00 0.00 ATOM 45 CZ2 TRP n 5 -35.545 19.339 23.879 1.00 0.00 ATOM 46 CZ3 TRP n 5 -35.730 19.274 21.447 1.00 0.00 ATOM 47 CH2 TRP n 5 -35.643 18.615 22.681 1.00 0.00 ATOM 48 N LYS n 6 -34.426 26.632 20.033 1.00 0.00 ATOM 49 CA LYS n 6 -33.824 27.147 18.818 1.00 0.00 ATOM 50 C LYS n 6 -32.328 27.278 18.964 1.00 0.00 ATOM 51 O LYS n 6 -31.582 26.871 18.079 1.00 0.00 ATOM 52 CB LYS n 6 -34.342 28.540 18.400 1.00 0.00 ATOM 53 CG LYS n 6 -35.777 28.543 17.858 1.00 0.00 ATOM 54 CD LYS n 6 -36.123 29.885 17.193 1.00 0.00 ATOM 55 CE LYS n 6 -37.489 29.888 16.498 1.00 0.00 ATOM 56 NZ LYS n 6 -37.723 31.179 15.813 1.00 0.00 ATOM 57 N LYS n 7 -31.863 27.819 20.116 1.00 0.00 ATOM 58 CA LYS n 7 -30.460 28.011 20.390 1.00 0.00 ATOM 59 C LYS n 7 -29.799 26.711 20.763 1.00 0.00 ATOM 60 O LYS n 7 -28.589 26.581 20.612 1.00 0.00 ATOM 61 CB LYS n 7 -30.224 28.976 21.576 1.00 0.00 ATOM 62 CG LYS n 7 -30.789 30.386 21.348 1.00 0.00 ATOM 63 CD LYS n 7 -30.479 31.336 22.514 1.00 0.00 ATOM 64 CE LYS n 7 -31.004 32.760 22.289 1.00 0.00 ATOM 65 NZ LYS n 7 -30.713 33.622 23.458 1.00 0.00 ATOM 66 N LYS n 8 -30.584 25.717 21.243 1.00 0.00 ATOM 67 CA LYS n 8 -30.111 24.414 21.653 1.00 0.00 ATOM 68 C LYS n 8 -29.685 23.604 20.458 1.00 0.00 ATOM 69 O LYS n 8 -28.618 22.994 20.459 1.00 0.00 ATOM 70 CB LYS n 8 -31.228 23.654 22.393 1.00 0.00 ATOM 71 CG LYS n 8 -30.793 22.439 23.220 1.00 0.00 ATOM 72 CD LYS n 8 -32.017 21.611 23.641 1.00 0.00 ATOM 73 CE LYS n 8 -31.832 20.780 24.913 1.00 0.00 ATOM 74 NZ LYS n 8 -31.759 21.661 26.103 1.00 0.00 ATOM 75 N ARG n 9 -30.531 23.608 19.399 1.00 0.00 ATOM 76 CA ARG n 9 -30.307 22.910 18.155 1.00 0.00 ATOM 77 C ARG n 9 -29.156 23.521 17.415 1.00 0.00 ATOM 78 O ARG n 9 -28.281 22.812 16.926 1.00 0.00 ATOM 79 CB ARG n 9 -31.537 23.014 17.221 1.00 0.00 ATOM 80 CG ARG n 9 -32.814 22.353 17.771 1.00 0.00 ATOM 81 CD ARG n 9 -34.075 22.938 17.112 1.00 0.00 ATOM 82 NE ARG n 9 -35.296 22.490 17.869 1.00 0.00 ATOM 83 CZ ARG n 9 -36.382 23.296 18.089 1.00 0.00 ATOM 84 NH1 ARG n 9 -36.419 24.580 17.631 1.00 0.00 ATOM 85 NH2 ARG n 9 -37.450 22.808 18.786 1.00 0.00 ATOM 86 N MET n 10 -29.134 24.871 17.345 1.00 0.00 ATOM 87 CA MET n 10 -28.161 25.625 16.599 1.00 0.00 ATOM 88 C MET n 10 -26.814 25.665 17.267 1.00 0.00 ATOM 89 O MET n 10 -25.828 25.919 16.587 1.00 0.00 ATOM 90 CB MET n 10 -28.622 27.064 16.285 1.00 0.00 ATOM 91 CG MET n 10 -29.825 27.138 15.318 1.00 0.00 ATOM 92 SD MET n 10 -29.587 26.375 13.676 1.00 0.00 ATOM 93 CE MET n 10 -28.195 27.386 13.094 1.00 0.00 ATOM 94 N ARG n 11 -26.732 25.413 18.599 1.00 0.00 ATOM 95 CA ARG n 11 -25.488 25.288 19.338 1.00 0.00 ATOM 96 C ARG n 11 -24.742 24.065 18.885 1.00 0.00 ATOM 97 O ARG n 11 -23.532 24.105 18.665 1.00 0.00 ATOM 98 CB ARG n 11 -25.751 25.137 20.860 1.00 0.00 ATOM 99 CG ARG n 11 -24.549 24.677 21.711 1.00 0.00 ATOM 100 CD ARG n 11 -24.831 24.548 23.218 1.00 0.00 ATOM 101 NE ARG n 11 -26.039 23.683 23.461 1.00 0.00 ATOM 102 CZ ARG n 11 -26.066 22.325 23.291 1.00 0.00 ATOM 103 NH1 ARG n 11 -24.974 21.637 22.851 1.00 0.00 ATOM 104 NH2 ARG n 11 -27.218 21.644 23.567 1.00 0.00 ATOM 105 N ARG n 12 -25.482 22.944 18.724 1.00 0.00 ATOM 106 CA ARG n 12 -24.962 21.669 18.298 1.00 0.00 ATOM 107 C ARG n 12 -24.489 21.742 16.871 1.00 0.00 ATOM 108 O ARG n 12 -23.493 21.120 16.512 1.00 0.00 ATOM 109 CB ARG n 12 -26.023 20.552 18.450 1.00 0.00 ATOM 110 CG ARG n 12 -26.353 20.285 19.930 1.00 0.00 ATOM 111 CD ARG n 12 -27.445 19.232 20.186 1.00 0.00 ATOM 112 NE ARG n 12 -28.796 19.812 19.854 1.00 0.00 ATOM 113 CZ ARG n 12 -29.909 19.638 20.634 1.00 0.00 ATOM 114 NH1 ARG n 12 -29.863 18.925 21.797 1.00 0.00 ATOM 115 NH2 ARG n 12 -31.097 20.189 20.243 1.00 0.00 ATOM 116 N LEU n 13 -25.188 22.546 16.041 1.00 0.00 ATOM 117 CA LEU n 13 -24.918 22.706 14.636 1.00 0.00 ATOM 118 C LEU n 13 -23.879 23.772 14.387 1.00 0.00 ATOM 119 O LEU n 13 -23.387 23.887 13.268 1.00 0.00 ATOM 120 CB LEU n 13 -26.208 23.105 13.881 1.00 0.00 ATOM 121 CG LEU n 13 -27.299 22.005 13.901 1.00 0.00 ATOM 122 CD1 LEU n 13 -28.692 22.586 13.587 1.00 0.00 ATOM 123 CD2 LEU n 13 -26.955 20.826 12.970 1.00 0.00 ATOM 124 N LYS n 14 -23.522 24.585 15.416 1.00 0.00 ATOM 125 CA LYS n 14 -22.664 25.744 15.272 1.00 0.00 ATOM 126 C LYS n 14 -21.265 25.354 14.891 1.00 0.00 ATOM 127 O LYS n 14 -20.674 25.952 13.994 1.00 0.00 ATOM 128 CB LYS n 14 -22.560 26.563 16.586 1.00 0.00 ATOM 129 CG LYS n 14 -21.824 27.910 16.461 1.00 0.00 ATOM 130 CD LYS n 14 -21.602 28.587 17.821 1.00 0.00 ATOM 131 CE LYS n 14 -20.769 29.877 17.759 1.00 0.00 ATOM 132 NZ LYS n 14 -21.468 30.947 17.010 1.00 0.00 ATOM 133 N ARG n 15 -20.718 24.314 15.558 1.00 0.00 ATOM 134 CA ARG n 15 -19.346 23.918 15.367 1.00 0.00 ATOM 135 C ARG n 15 -19.325 22.723 14.470 1.00 0.00 ATOM 136 O ARG n 15 -18.314 22.476 13.819 1.00 0.00 ATOM 137 CB ARG n 15 -18.673 23.502 16.697 1.00 0.00 ATOM 138 CG ARG n 15 -18.057 24.664 17.499 1.00 0.00 ATOM 139 CD ARG n 15 -19.036 25.764 17.929 1.00 0.00 ATOM 140 NE ARG n 15 -18.359 26.683 18.905 1.00 0.00 ATOM 141 CZ ARG n 15 -17.589 27.749 18.529 1.00 0.00 ATOM 142 NH1 ARG n 15 -17.390 28.051 17.214 1.00 0.00 ATOM 143 NH2 ARG n 15 -17.006 28.523 19.490 1.00 0.00 ATOM 144 N LYS n 16 -20.449 21.972 14.376 1.00 0.00 ATOM 145 CA LYS n 16 -20.561 20.831 13.499 1.00 0.00 ATOM 146 C LYS n 16 -20.478 21.215 12.052 1.00 0.00 ATOM 147 O LYS n 16 -19.848 20.496 11.287 1.00 0.00 ATOM 148 CB LYS n 16 -21.842 19.998 13.725 1.00 0.00 ATOM 149 CG LYS n 16 -21.739 19.040 14.926 1.00 0.00 ATOM 150 CD LYS n 16 -20.800 17.847 14.680 1.00 0.00 ATOM 151 CE LYS n 16 -20.790 16.835 15.832 1.00 0.00 ATOM 152 NZ LYS n 16 -19.900 15.691 15.521 1.00 0.00 ATOM 153 N ARG n 17 -21.089 22.357 11.651 1.00 0.00 ATOM 154 CA ARG n 17 -21.170 22.755 10.262 1.00 0.00 ATOM 155 C ARG n 17 -19.919 23.473 9.831 1.00 0.00 ATOM 156 O ARG n 17 -19.633 23.535 8.637 1.00 0.00 ATOM 157 CB ARG n 17 -22.375 23.687 9.995 1.00 0.00 ATOM 158 CG ARG n 17 -23.722 22.948 10.062 1.00 0.00 ATOM 159 CD ARG n 17 -24.927 23.892 9.949 1.00 0.00 ATOM 160 NE ARG n 17 -26.176 23.065 9.867 1.00 0.00 ATOM 161 CZ ARG n 17 -27.426 23.581 10.079 1.00 0.00 ATOM 162 NH1 ARG n 17 -27.599 24.874 10.477 1.00 0.00 ATOM 163 NH2 ARG n 17 -28.520 22.788 9.879 1.00 0.00 ATOM 164 N ARG n 18 -19.115 23.992 10.793 1.00 0.00 ATOM 165 CA ARG n 18 -17.788 24.509 10.531 1.00 0.00 ATOM 166 C ARG n 18 -16.838 23.379 10.222 1.00 0.00 ATOM 167 O ARG n 18 -15.950 23.516 9.383 1.00 0.00 ATOM 168 CB ARG n 18 -17.220 25.310 11.723 1.00 0.00 ATOM 169 CG ARG n 18 -17.980 26.622 11.977 1.00 0.00 ATOM 170 CD ARG n 18 -17.415 27.406 13.170 1.00 0.00 ATOM 171 NE ARG n 18 -18.191 28.683 13.333 1.00 0.00 ATOM 172 CZ ARG n 18 -17.679 29.788 13.958 1.00 0.00 ATOM 173 NH1 ARG n 18 -16.415 29.788 14.472 1.00 0.00 ATOM 174 NH2 ARG n 18 -18.442 30.914 14.066 1.00 0.00 ATOM 175 N LYS n 19 -17.038 22.223 10.898 1.00 0.00 ATOM 176 CA LYS n 19 -16.197 21.056 10.793 1.00 0.00 ATOM 177 C LYS n 19 -16.667 20.162 9.677 1.00 0.00 ATOM 178 O LYS n 19 -15.968 19.215 9.327 1.00 0.00 ATOM 179 CB LYS n 19 -16.251 20.214 12.090 1.00 0.00 ATOM 180 CG LYS n 19 -15.576 20.898 13.287 1.00 0.00 ATOM 181 CD LYS n 19 -15.941 20.258 14.636 1.00 0.00 ATOM 182 CE LYS n 19 -15.378 21.035 15.836 1.00 0.00 ATOM 183 NZ LYS n 19 -15.860 20.467 17.117 1.00 0.00 ATOM 184 N MET n 20 -17.844 20.451 9.066 1.00 0.00 ATOM 185 CA MET n 20 -18.440 19.631 8.031 1.00 0.00 ATOM 186 C MET n 20 -17.985 20.123 6.681 1.00 0.00 ATOM 187 O MET n 20 -18.527 19.730 5.653 1.00 0.00 ATOM 188 CB MET n 20 -19.990 19.645 8.093 1.00 0.00 ATOM 189 CG MET n 20 -20.703 18.442 7.443 1.00 0.00 ATOM 190 SD MET n 20 -20.285 16.833 8.182 1.00 0.00 ATOM 191 CE MET n 20 -21.550 15.912 7.263 1.00 0.00 ATOM 192 N ARG n 21 -16.963 21.007 6.662 1.00 0.00 ATOM 193 CA ARG n 21 -16.373 21.543 5.464 1.00 0.00 ATOM 194 C ARG n 21 -14.972 21.001 5.387 1.00 0.00 ATOM 195 O ARG n 21 -14.427 20.848 4.295 1.00 0.00 ATOM 196 CB ARG n 21 -16.336 23.087 5.503 1.00 0.00 ATOM 197 CG ARG n 21 -17.745 23.691 5.641 1.00 0.00 ATOM 198 CD ARG n 21 -17.745 25.215 5.802 1.00 0.00 ATOM 199 NE ARG n 21 -19.144 25.660 6.116 1.00 0.00 ATOM 200 CZ ARG n 21 -19.430 26.873 6.681 1.00 0.00 ATOM 201 NH1 ARG n 21 -18.441 27.765 6.975 1.00 0.00 ATOM 202 NH2 ARG n 21 -20.728 27.194 6.955 1.00 0.00 ATOM 203 N GLN n 22 -14.371 20.655 6.557 1.00 0.00 ATOM 204 CA GLN n 22 -13.113 19.946 6.632 1.00 0.00 ATOM 205 C GLN n 22 -13.322 18.503 6.276 1.00 0.00 ATOM 206 O GLN n 22 -12.595 17.944 5.455 1.00 0.00 ATOM 207 CB GLN n 22 -12.524 20.006 8.061 1.00 0.00 ATOM 208 CG GLN n 22 -11.110 19.411 8.195 1.00 0.00 ATOM 209 CD GLN n 22 -10.478 19.875 9.515 1.00 0.00 ATOM 210 OE1 GLN n 22 -11.181 20.205 10.478 1.00 0.00 ATOM 211 NE2 GLN n 22 -9.110 19.906 9.542 1.00 0.00 ATOM 212 N ARG n 23 -14.371 17.887 6.878 1.00 0.00 ATOM 213 CA ARG n 23 -14.862 16.573 6.542 1.00 0.00 ATOM 214 C ARG n 23 -15.368 16.547 5.132 1.00 0.00 ATOM 215 O ARG n 23 -14.927 15.733 4.324 1.00 0.00 ATOM 216 CB ARG n 23 -16.028 16.125 7.456 1.00 0.00 ATOM 217 CG ARG n 23 -15.665 16.002 8.944 1.00 0.00 ATOM 218 CD ARG n 23 -16.925 15.897 9.816 1.00 0.00 ATOM 219 NE ARG n 23 -16.534 15.968 11.264 1.00 0.00 ATOM 220 CZ ARG n 23 -17.312 16.566 12.219 1.00 0.00 ATOM 221 NH1 ARG n 23 -18.505 17.147 11.902 1.00 0.00 ATOM 222 NH2 ARG n 23 -16.883 16.582 13.515 1.00 0.00 ATOM 223 N SER n 24 -16.312 17.479 4.854 1.00 0.00 ATOM 224 CA SER n 24 -17.153 17.552 3.687 1.00 0.00 ATOM 225 C SER n 24 -18.255 16.541 3.849 1.00 0.00 ATOM 226 O SER n 24 -19.310 16.878 4.384 1.00 0.00 ATOM 227 CB SER n 24 -16.451 17.498 2.314 1.00 0.00 ATOM 228 OG SER n 24 -15.537 18.579 2.191 1.00 0.00 ATOM 229 N LYS n 25 -18.032 15.275 3.411 1.00 0.00 ATOM 230 CA LYS n 25 -18.950 14.165 3.581 1.00 0.00 ATOM 231 C LYS n 25 -19.427 13.943 5.030 1.00 0.00 ATOM 232 O LYS n 25 -20.571 13.440 5.194 1.00 0.00 ATOM 233 CB LYS n 25 -18.506 12.815 2.955 1.00 0.00 ATOM 234 CG LYS n 25 -17.344 12.063 3.633 1.00 0.00 ATOM 235 CD LYS n 25 -15.945 12.596 3.294 1.00 0.00 ATOM 236 CE LYS n 25 -14.830 11.741 3.905 1.00 0.00 ATOM 237 NZ LYS n 25 -13.488 12.236 3.523 1.00 0.00 ATOM 238 OXT LYS n 25 -18.657 14.253 5.977 1.00 0.00 TER