HEADER VIRUS/IMMUNE SYSTEM 13-OCT-14 3J8D TITLE Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5 COMPND MOL_ID: 2; COMPND 2 MOLECULE: antibody E111 Fab fragment; COMPND 3 CHAIN: A, D; EXPDTA ELECTRON MICROSCOPY DBREF 3J8D A 396 819 PDB 3J8D 3J8D 396 819 SEQRES 1 A 106 ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE PRO PRO SEQRES 2 A 106 SER SER GLU GLN LEU THR SER GLY GLY ALA SER VAL VAL SEQRES 3 A 106 CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE ASN VAL SEQRES 4 A 106 LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN GLY VAL SEQRES 5 A 106 LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SER THR SEQRES 6 A 106 TYR SER MET SER SER THR LEU THR LEU THR LYS ASP GLU SEQRES 7 A 106 TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA THR HIS SEQRES 8 A 106 LYS THR SER THR SER PRO ILE VAL LYS SER PHE ASN ARG SEQRES 9 A 106 SER ALA ATOM 1 CA ARG A 503 -87.120-177.346-221.224 1.00 85.70 ATOM 2 CA ALA A 504 -86.802-179.449-224.369 1.00 85.12 ATOM 3 CA ASP A 505 -87.090-177.634-227.689 1.00 82.49 ATOM 4 CA ALA A 506 -90.572-177.414-229.159 1.00 74.09 ATOM 5 CA ALA A 507 -91.873-176.273-232.524 1.00 73.58 ATOM 6 CA PRO A 508 -94.483-173.496-232.284 1.00 69.76 ATOM 7 CA THR A 509 -98.161-174.194-232.785 1.00 69.66 ATOM 8 CA VAL A 510 -99.208-171.783-235.510 1.00 67.91 ATOM 9 CA SER A 511 -102.737-170.455-235.927 1.00 67.92 ATOM 10 CA ILE A 512 -103.842-167.660-238.247 1.00 67.28 ATOM 11 CA PHE A 513 -106.868-165.399-237.808 1.00 69.57 ATOM 12 CA PRO A 514 -108.473-163.004-240.359 1.00 73.30 ATOM 13 CA PRO A 515 -110.035-159.668-239.274 1.00 78.49 ATOM 14 CA SER A 516 -113.395-159.852-237.485 1.00 81.66 ATOM 15 CA SER A 517 -116.577-158.574-239.154 1.00 86.99 ATOM 16 CA GLU A 518 -116.849-156.098-236.268 1.00 86.18 ATOM 17 CA GLN A 519 -113.403-154.656-237.013 1.00 81.54 ATOM 18 CA LEU A 520 -114.333-154.467-240.691 1.00 82.91 ATOM 19 CA THR A 521 -117.359-152.362-239.781 1.00 86.00 ATOM 20 CA SER A 522 -114.998-149.794-238.234 1.00 80.43 ATOM 21 CA GLY A 523 -112.937-149.688-241.440 1.00 76.52 ATOM 22 CA GLY A 524 -109.745-151.390-240.251 1.00 73.16 ATOM 23 CA ALA A 525 -108.150-154.761-240.970 1.00 74.82 ATOM 24 CA SER A 526 -105.692-156.470-238.621 1.00 69.96 ATOM 25 CA VAL A 527 -104.521-160.021-239.314 1.00 69.43 ATOM 26 CA VAL A 528 -103.280-161.955-236.286 1.00 66.23 ATOM 27 CA CYS A 529 -100.977-164.994-236.108 1.00 66.64 ATOM 28 CA PHE A 530 -100.418-166.883-232.848 1.00 64.93 ATOM 29 CA LEU A 531 -97.313-169.010-232.308 1.00 65.95 ATOM 30 CA ASN A 532 -97.840-170.891-229.063 1.00 66.06 ATOM 31 CA ASN A 533 -95.652-173.020-226.798 1.00 67.82 ATOM 32 CA PHE A 534 -92.261-172.891-228.548 1.00 73.00 ATOM 33 CA TYR A 535 -88.701-172.957-227.175 1.00 76.61 ATOM 34 CA PRO A 536 -86.084-171.308-227.370 1.00 79.09 ATOM 35 CA LYS A 537 -87.116-167.662-227.511 1.00 77.69 ATOM 36 CA ASP A 538 -85.516-166.916-230.839 1.00 74.23 ATOM 37 CA ILE A 539 -87.961-167.196-233.708 1.00 72.44 ATOM 38 CA ASN A 540 -88.760-165.271-236.874 1.00 69.39 ATOM 39 CA VAL A 541 -91.988-164.620-238.755 1.00 69.28 ATOM 40 CA LYS A 542 -92.404-163.551-242.370 1.00 69.58 ATOM 41 CA TRP A 543 -95.609-162.231-243.916 1.00 69.45 ATOM 42 CA LYS A 544 -96.540-162.544-247.575 1.00 74.13 ATOM 43 CA ILE A 545 -99.483-161.060-249.470 1.00 76.36 ATOM 44 CA ASP A 546 -100.188-162.716-252.835 1.00 80.94 ATOM 45 CA GLY A 547 -96.663-164.130-252.742 1.00 82.49 ATOM 46 CA SER A 548 -95.135-160.697-252.155 1.00 76.78 ATOM 47 CA GLU A 549 -93.158-160.210-248.938 1.00 72.70 ATOM 48 CA ARG A 550 -94.604-157.606-246.578 1.00 70.64 ATOM 49 CA GLN A 551 -92.261-155.917-244.127 1.00 66.90 ATOM 50 CA ASN A 552 -94.235-152.772-243.314 1.00 65.49 ATOM 51 CA GLY A 553 -97.050-152.756-240.771 1.00 64.45 ATOM 52 CA VAL A 554 -95.802-155.727-238.776 1.00 64.37 ATOM 53 CA LEU A 555 -95.913-155.659-234.980 1.00 62.47 ATOM 54 CA ASN A 556 -94.594-158.508-232.814 1.00 63.34 ATOM 55 CA SER A 557 -94.932-159.548-229.169 1.00 63.23 ATOM 56 CA TRP A 558 -93.617-162.367-226.963 1.00 65.82 ATOM 57 CA THR A 559 -94.846-163.632-223.608 1.00 66.57 ATOM 58 CA ASP A 560 -92.479-164.257-220.725 1.00 71.28 ATOM 59 CA GLN A 561 -91.774-167.870-219.750 1.00 74.05 ATOM 60 CA ASP A 562 -94.908-169.806-218.862 1.00 73.47 ATOM 61 CA SER A 563 -95.209-170.639-215.165 1.00 76.47 ATOM 62 CA LYS A 564 -96.616-174.097-215.954 1.00 77.13 ATOM 63 CA ASP A 565 -94.803-175.508-219.015 1.00 75.03 ATOM 64 CA SER A 566 -91.675-173.331-219.479 1.00 76.23 ATOM 65 CA THR A 567 -92.672-172.503-223.031 1.00 76.23 ATOM 66 CA TYR A 568 -92.845-169.193-224.858 1.00 68.79 ATOM 67 CA SER A 569 -95.576-167.730-227.010 1.00 64.96 ATOM 68 CA MET A 570 -95.687-165.034-229.658 1.00 63.62 ATOM 69 CA SER A 571 -98.393-162.899-231.218 1.00 63.32 ATOM 70 CA SER A 572 -97.837-161.171-234.533 1.00 63.45 ATOM 71 CA THR A 573 -100.158-158.544-235.952 1.00 65.82 ATOM 72 CA LEU A 574 -100.087-157.216-239.495 1.00 67.35 ATOM 73 CA THR A 575 -102.229-154.101-239.706 1.00 66.10 ATOM 74 CA LEU A 576 -103.777-152.848-242.922 1.00 69.34 ATOM 75 CA THR A 577 -106.653-150.665-244.039 1.00 70.85 ATOM 76 CA LYS A 578 -109.816-152.482-245.136 1.00 81.51 ATOM 77 CA ASP A 579 -109.394-151.086-248.663 1.00 75.25 ATOM 78 CA GLU A 580 -105.877-152.458-249.142 1.00 73.11 ATOM 79 CA TYR A 581 -106.981-155.754-247.595 1.00 74.32 ATOM 80 CA GLU A 582 -109.921-156.249-249.973 1.00 83.48 ATOM 81 CA ARG A 583 -107.696-155.907-253.035 1.00 77.78 ATOM 82 CA HIS A 584 -105.740-159.084-252.278 1.00 83.02 ATOM 83 CA ASN A 585 -106.466-162.835-252.112 1.00 84.89 ATOM 84 CA SER A 586 -104.047-165.119-250.340 1.00 82.20 ATOM 85 CA TYR A 587 -102.405-164.119-247.069 1.00 76.53 ATOM 86 CA THR A 588 -99.509-166.055-245.571 1.00 76.10 ATOM 87 CA CYS A 589 -97.739-166.269-242.214 1.00 70.63 ATOM 88 CA GLU A 590 -94.476-168.211-242.061 1.00 71.80 ATOM 89 CA ALA A 591 -92.742-169.280-238.862 1.00 71.93 ATOM 90 CA THR A 592 -89.020-170.041-238.879 1.00 72.87 ATOM 91 CA HIS A 593 -87.549-171.558-235.727 1.00 72.58 ATOM 92 CA LYS A 594 -84.543-173.551-234.486 1.00 78.47 ATOM 93 CA THR A 595 -86.657-176.714-234.485 1.00 78.47 ATOM 94 CA SER A 596 -87.806-176.212-238.078 1.00 76.08 ATOM 95 CA THR A 597 -85.480-176.093-241.084 1.00 81.25 ATOM 96 CA SER A 598 -88.232-175.643-243.631 1.00 79.28 ATOM 97 CA PRO A 599 -90.652-173.272-241.841 1.00 75.38 ATOM 98 CA ILE A 600 -94.167-174.177-240.712 1.00 76.14 ATOM 99 CA VAL A 601 -96.507-172.122-242.884 1.00 73.30 ATOM 100 CA LYS A 602 -100.136-171.111-242.306 1.00 71.85 ATOM 101 CA SER A 603 -102.225-169.183-244.840 1.00 75.45 ATOM 102 CA PHE A 604 -105.760-168.230-245.807 1.00 80.76 ATOM 103 CA ASN A 605 -107.845-166.992-248.740 1.00 80.76 ATOM 104 CA ARG A 606 -110.314-164.223-247.839 1.00 82.49 ATOM 105 CA SER A 720 -100.448-135.811-222.765 1.00 85.94 ATOM 106 CA ALA A 721 -102.444-138.420-224.680 1.00 81.72 TER