HEADER VIRUS/IMMUNE SYSTEM 13-OCT-14 3J8D TITLE Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5 COMPND MOL_ID: 2; COMPND 2 MOLECULE: antibody E111 Fab fragment; COMPND 3 CHAIN: A, D; EXPDTA ELECTRON MICROSCOPY DBREF 3J8D A 396 819 PDB 3J8D 3J8D 396 819 SEQRES 1 A 98 LYS THR THR ALA PRO SER VAL TYR PRO LEU ALA PRO VAL SEQRES 2 A 98 CYS GLY GLY THR THR GLY SER SER VAL THR LEU GLY CYS SEQRES 3 A 98 LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR LEU THR SEQRES 4 A 98 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 5 A 98 PRO ALA LEU LEU GLN SER GLY LEU TYR THR LEU SER SER SEQRES 6 A 98 SER VAL THR VAL THR SER ASN THR TRP PRO SER GLN THR SEQRES 7 A 98 ILE THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 8 A 98 VAL ASP LYS LYS ILE GLU SER ATOM 1 CA LYS A 722 -106.137-138.638-223.859 1.00 88.75 ATOM 2 CA THR A 723 -108.313-141.459-222.515 1.00 86.13 ATOM 3 CA THR A 724 -109.482-143.933-225.146 1.00 82.14 ATOM 4 CA ALA A 725 -111.741-146.979-224.834 1.00 83.50 ATOM 5 CA PRO A 726 -110.553-150.219-226.411 1.00 77.44 ATOM 6 CA SER A 727 -112.162-151.915-229.374 1.00 78.60 ATOM 7 CA VAL A 728 -112.803-155.597-228.733 1.00 78.69 ATOM 8 CA TYR A 729 -112.936-158.013-231.652 1.00 77.11 ATOM 9 CA PRO A 730 -113.671-161.745-231.572 1.00 79.39 ATOM 10 CA LEU A 731 -111.224-163.930-233.510 1.00 75.45 ATOM 11 CA ALA A 732 -112.918-166.991-234.985 1.00 75.37 ATOM 12 CA PRO A 733 -111.124-169.450-237.321 1.00 75.22 ATOM 13 CA VAL A 734 -111.063-169.425-241.121 1.00 79.41 ATOM 14 CA CYS A 735 -114.121-171.095-242.639 1.00 82.49 ATOM 15 CA GLY A 736 -111.587-173.484-244.194 1.00 83.96 ATOM 16 CA GLY A 737 -109.171-173.407-241.300 1.00 78.66 ATOM 17 CA THR A 738 -110.971-175.762-238.910 1.00 80.70 ATOM 18 CA THR A 739 -108.085-178.222-238.610 1.00 76.96 ATOM 19 CA GLY A 740 -107.119-180.400-235.665 1.00 79.85 ATOM 20 CA SER A 741 -108.701-182.343-232.812 1.00 79.30 ATOM 21 CA SER A 742 -108.723-179.108-230.812 1.00 79.30 ATOM 22 CA VAL A 743 -109.834-175.666-232.013 1.00 74.39 ATOM 23 CA THR A 744 -108.101-172.391-231.083 1.00 70.65 ATOM 24 CA LEU A 745 -109.944-169.069-230.682 1.00 71.82 ATOM 25 CA GLY A 746 -108.764-165.525-229.996 1.00 71.68 ATOM 26 CA CYS A 747 -109.637-162.033-228.770 1.00 79.20 ATOM 27 CA LEU A 748 -108.170-158.775-230.103 1.00 68.63 ATOM 28 CA VAL A 749 -108.181-155.583-228.013 1.00 69.97 ATOM 29 CA LYS A 750 -107.087-152.607-230.106 1.00 69.00 ATOM 30 CA GLY A 751 -106.674-148.852-229.821 1.00 71.46 ATOM 31 CA TYR A 752 -106.939-148.082-226.113 1.00 76.08 ATOM 32 CA PHE A 753 -105.225-145.716-223.691 1.00 80.48 ATOM 33 CA PRO A 754 -103.891-145.687-221.052 1.00 78.99 ATOM 34 CA GLU A 755 -102.693-149.054-219.775 1.00 73.98 ATOM 35 CA PRO A 756 -103.867-151.459-218.422 1.00 75.80 ATOM 36 CA VAL A 757 -106.733-153.631-219.579 1.00 78.64 ATOM 37 CA THR A 758 -107.904-156.858-217.950 1.00 81.81 ATOM 38 CA LEU A 759 -109.032-159.699-220.203 1.00 79.49 ATOM 39 CA THR A 760 -110.699-162.888-218.989 1.00 84.88 ATOM 40 CA TRP A 761 -112.506-165.794-220.633 1.00 82.25 ATOM 41 CA ASN A 762 -115.989-166.809-219.466 1.00 90.11 ATOM 42 CA SER A 763 -115.702-164.390-216.521 1.00 92.40 ATOM 43 CA GLY A 764 -112.599-166.219-215.295 1.00 89.08 ATOM 44 CA SER A 765 -114.140-169.698-215.237 1.00 91.21 ATOM 45 CA LEU A 766 -111.829-170.589-218.123 1.00 84.61 ATOM 46 CA SER A 767 -108.204-169.909-217.217 1.00 85.05 ATOM 47 CA SER A 768 -106.246-172.922-218.461 1.00 78.30 ATOM 48 CA GLY A 769 -104.768-173.009-221.952 1.00 75.12 ATOM 49 CA VAL A 770 -104.818-169.223-222.139 1.00 72.98 ATOM 50 CA HIS A 771 -102.093-166.872-223.369 1.00 67.41 ATOM 51 CA THR A 772 -102.635-163.139-222.883 1.00 70.54 ATOM 52 CA PHE A 773 -100.084-161.027-224.712 1.00 67.89 ATOM 53 CA PRO A 774 -98.326-157.801-223.583 1.00 68.90 ATOM 54 CA ALA A 775 -99.727-154.481-224.809 1.00 65.16 ATOM 55 CA LEU A 776 -98.016-152.513-227.576 1.00 64.97 ATOM 56 CA LEU A 777 -97.909-148.757-228.189 1.00 64.34 ATOM 57 CA GLN A 778 -98.852-147.883-231.765 1.00 63.96 ATOM 58 CA SER A 779 -99.875-144.510-233.236 1.00 68.28 ATOM 59 CA GLY A 780 -100.147-143.429-229.595 1.00 71.65 ATOM 60 CA LEU A 781 -102.594-146.192-228.708 1.00 71.65 ATOM 61 CA TYR A 782 -102.151-149.605-227.082 1.00 68.46 ATOM 62 CA THR A 783 -102.938-152.958-228.685 1.00 64.83 ATOM 63 CA LEU A 784 -103.011-156.428-227.120 1.00 65.64 ATOM 64 CA SER A 785 -104.300-159.924-227.921 1.00 67.95 ATOM 65 CA SER A 786 -105.181-163.196-226.197 1.00 69.96 ATOM 66 CA SER A 787 -105.469-166.785-227.408 1.00 69.59 ATOM 67 CA VAL A 788 -107.343-169.742-225.931 1.00 69.91 ATOM 68 CA THR A 789 -107.125-173.364-227.093 1.00 71.00 ATOM 69 CA VAL A 790 -109.889-175.886-226.397 1.00 74.53 ATOM 70 CA THR A 791 -110.929-179.344-227.573 1.00 79.89 ATOM 71 CA SER A 792 -113.185-179.474-230.642 1.00 80.99 ATOM 72 CA ASN A 793 -115.856-180.928-228.358 1.00 86.52 ATOM 73 CA THR A 794 -115.922-177.618-226.478 1.00 85.10 ATOM 74 CA TRP A 795 -116.420-175.213-229.385 1.00 83.57 ATOM 75 CA PRO A 796 -118.652-174.321-231.101 1.00 87.44 ATOM 76 CA SER A 797 -120.706-176.692-228.914 1.00 92.10 ATOM 77 CA GLN A 798 -120.210-174.782-225.649 1.00 88.23 ATOM 78 CA THR A 799 -120.292-170.989-225.342 1.00 87.78 ATOM 79 CA ILE A 800 -117.095-168.930-225.123 1.00 83.59 ATOM 80 CA THR A 801 -116.952-165.192-224.448 1.00 87.64 ATOM 81 CA CYS A 802 -114.057-162.746-224.140 1.00 76.86 ATOM 82 CA ASN A 803 -114.475-160.170-221.372 1.00 87.48 ATOM 83 CA VAL A 804 -112.434-156.973-221.304 1.00 83.61 ATOM 84 CA ALA A 805 -112.392-154.355-218.548 1.00 85.85 ATOM 85 CA HIS A 806 -110.665-150.997-219.030 1.00 87.07 ATOM 86 CA PRO A 807 -110.907-149.175-215.684 1.00 88.83 ATOM 87 CA ALA A 808 -109.274-145.983-216.982 1.00 88.72 ATOM 88 CA SER A 809 -112.225-145.473-219.322 1.00 91.08 ATOM 89 CA SER A 810 -114.466-147.318-216.859 1.00 92.90 ATOM 90 CA THR A 811 -115.589-149.746-219.570 1.00 95.33 ATOM 91 CA LYS A 812 -116.370-153.471-219.566 1.00 94.00 ATOM 92 CA VAL A 813 -117.224-155.425-222.720 1.00 90.93 ATOM 93 CA ASP A 814 -118.220-159.030-223.434 1.00 89.93 ATOM 94 CA LYS A 815 -117.856-160.589-226.892 1.00 88.22 ATOM 95 CA LYS A 816 -119.310-163.948-227.944 1.00 89.19 ATOM 96 CA ILE A 817 -117.271-165.922-230.483 1.00 83.34 ATOM 97 CA GLU A 818 -119.457-166.634-233.515 1.00 87.56 ATOM 98 CA SER A 819 -118.974-168.366-236.879 1.00 85.48 TER