HEADER VIRUS/IMMUNE SYSTEM 13-OCT-14 3J8D TITLE Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5 COMPND MOL_ID: 2; COMPND 2 MOLECULE: antibody E111 Fab fragment; COMPND 3 CHAIN: A, D; EXPDTA ELECTRON MICROSCOPY DBREF 3J8D D 396 819 PDB 3J8D 3J8D 396 819 SEQRES 1 D 98 LYS THR THR ALA PRO SER VAL TYR PRO LEU ALA PRO VAL SEQRES 2 D 98 CYS GLY GLY THR THR GLY SER SER VAL THR LEU GLY CYS SEQRES 3 D 98 LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR LEU THR SEQRES 4 D 98 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 5 D 98 PRO ALA LEU LEU GLN SER GLY LEU TYR THR LEU SER SER SEQRES 6 D 98 SER VAL THR VAL THR SER ASN THR TRP PRO SER GLN THR SEQRES 7 D 98 ILE THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 8 D 98 VAL ASP LYS LYS ILE GLU SER ATOM 1 CA LYS D 722 -38.514-217.142-183.815 1.00143.05 ATOM 2 CA THR D 723 -42.114-217.912-184.787 1.00137.31 ATOM 3 CA THR D 724 -42.829-221.593-185.380 1.00139.04 ATOM 4 CA ALA D 725 -46.028-223.338-186.475 1.00147.92 ATOM 5 CA PRO D 726 -47.150-226.368-184.486 1.00153.05 ATOM 6 CA SER D 727 -47.236-229.911-185.783 1.00165.55 ATOM 7 CA VAL D 728 -50.569-231.592-185.115 1.00188.34 ATOM 8 CA TYR D 729 -50.734-235.366-184.785 1.00214.20 ATOM 9 CA PRO D 730 -53.811-237.538-184.254 1.00222.76 ATOM 10 CA LEU D 731 -53.521-240.120-181.467 1.00221.98 ATOM 11 CA ALA D 732 -55.515-243.260-182.230 1.00198.52 ATOM 12 CA PRO D 733 -55.414-246.389-180.012 1.00218.10 ATOM 13 CA VAL D 734 -53.182-249.442-180.396 1.00233.22 ATOM 14 CA CYS D 735 -54.560-251.949-182.898 1.00227.03 ATOM 15 CA GLY D 736 -54.615-254.331-179.919 1.00209.87 ATOM 16 CA GLY D 737 -55.432-251.700-177.346 1.00219.56 ATOM 17 CA THR D 738 -59.165-251.315-177.997 1.00199.13 ATOM 18 CA THR D 739 -60.226-252.203-174.454 1.00167.71 ATOM 19 CA GLY D 740 -63.236-250.983-172.503 1.00171.73 ATOM 20 CA SER D 741 -66.855-249.965-173.031 1.00162.35 ATOM 21 CA SER D 742 -65.600-246.475-173.876 1.00161.86 ATOM 22 CA VAL D 743 -62.699-245.566-176.175 1.00168.01 ATOM 23 CA THR D 744 -60.218-242.740-175.506 1.00192.78 ATOM 24 CA LEU D 745 -58.572-240.679-178.271 1.00209.60 ATOM 25 CA GLY D 746 -55.931-237.951-178.238 1.00203.67 ATOM 26 CA CYS D 747 -54.317-235.026-180.053 1.00198.47 ATOM 27 CA LEU D 748 -50.630-234.065-179.888 1.00193.38 ATOM 28 CA VAL D 749 -49.453-230.528-180.697 1.00160.71 ATOM 29 CA LYS D 750 -45.661-230.385-180.877 1.00153.20 ATOM 30 CA GLY D 751 -42.883-227.936-181.678 1.00137.75 ATOM 31 CA TYR D 752 -44.535-224.518-181.754 1.00137.14 ATOM 32 CA PHE D 753 -43.601-221.014-180.638 1.00142.90 ATOM 33 CA PRO D 754 -44.663-218.727-179.095 1.00150.33 ATOM 34 CA GLU D 755 -47.522-219.522-176.729 1.00143.88 ATOM 35 CA PRO D 756 -50.487-219.941-176.895 1.00144.37 ATOM 36 CA VAL D 757 -52.386-222.429-179.010 1.00152.43 ATOM 37 CA THR D 758 -56.123-223.102-178.875 1.00156.43 ATOM 38 CA LEU D 759 -57.317-226.684-179.267 1.00170.13 ATOM 39 CA THR D 760 -60.950-227.721-179.656 1.00170.01 ATOM 40 CA TRP D 761 -62.768-230.918-180.595 1.00180.53 ATOM 41 CA ASN D 762 -65.346-230.920-183.402 1.00175.15 ATOM 42 CA SER D 763 -65.143-227.108-183.583 1.00175.78 ATOM 43 CA GLY D 764 -66.197-226.858-179.935 1.00160.08 ATOM 44 CA SER D 765 -69.338-228.985-180.244 1.00185.41 ATOM 45 CA LEU D 766 -67.577-231.598-178.114 1.00179.56 ATOM 46 CA SER D 767 -66.399-230.099-174.829 1.00165.68 ATOM 47 CA SER D 768 -67.289-232.651-172.152 1.00161.16 ATOM 48 CA GLY D 769 -64.853-235.372-171.135 1.00161.60 ATOM 49 CA VAL D 770 -61.931-233.336-172.435 1.00152.63 ATOM 50 CA HIS D 771 -58.568-232.688-170.781 1.00154.24 ATOM 51 CA THR D 772 -56.235-230.189-172.448 1.00153.74 ATOM 52 CA PHE D 773 -52.763-230.182-170.949 1.00146.39 ATOM 53 CA PRO D 774 -50.425-227.221-170.220 1.00148.16 ATOM 54 CA ALA D 775 -47.697-226.432-172.754 1.00130.10 ATOM 55 CA LEU D 776 -44.066-227.355-172.103 1.00140.98 ATOM 56 CA LEU D 777 -40.870-225.664-173.294 1.00148.12 ATOM 57 CA GLN D 778 -38.463-228.145-174.872 1.00154.58 ATOM 58 CA SER D 779 -35.430-227.485-177.096 1.00143.67 ATOM 59 CA GLY D 780 -36.813-223.943-177.289 1.00148.54 ATOM 60 CA LEU D 781 -40.195-225.077-178.586 1.00141.16 ATOM 61 CA TYR D 782 -43.539-225.693-176.874 1.00137.77 ATOM 62 CA THR D 783 -45.379-229.014-176.706 1.00151.18 ATOM 63 CA LEU D 784 -48.898-229.765-175.468 1.00153.10 ATOM 64 CA SER D 785 -51.474-232.571-175.632 1.00161.64 ATOM 65 CA SER D 786 -55.204-233.162-175.198 1.00166.38 ATOM 66 CA SER D 787 -57.283-236.250-174.439 1.00166.71 ATOM 67 CA VAL D 788 -60.962-236.960-175.069 1.00176.72 ATOM 68 CA THR D 789 -62.926-239.977-173.818 1.00175.24 ATOM 69 CA VAL D 790 -66.122-241.158-175.514 1.00166.18 ATOM 70 CA THR D 791 -68.371-244.220-175.500 1.00163.73 ATOM 71 CA SER D 792 -67.439-247.007-177.925 1.00162.85 ATOM 72 CA ASN D 793 -70.723-246.275-179.699 1.00172.80 ATOM 73 CA THR D 794 -69.356-242.845-180.623 1.00168.48 ATOM 74 CA TRP D 795 -66.044-243.854-182.204 1.00179.13 ATOM 75 CA PRO D 796 -65.123-244.953-184.786 1.00193.97 ATOM 76 CA SER D 797 -68.832-244.768-185.694 1.00189.99 ATOM 77 CA GLN D 798 -69.125-240.972-185.477 1.00190.80 ATOM 78 CA THR D 799 -66.495-238.534-186.752 1.00200.98 ATOM 79 CA ILE D 800 -64.031-236.836-184.396 1.00199.98 ATOM 80 CA THR D 801 -61.578-234.110-185.400 1.00182.38 ATOM 81 CA CYS D 802 -58.976-232.147-183.442 1.00168.34 ATOM 82 CA ASN D 803 -58.785-228.460-184.357 1.00164.66 ATOM 83 CA VAL D 804 -55.763-226.343-183.472 1.00165.63 ATOM 84 CA ALA D 805 -55.384-222.593-183.970 1.00157.76 ATOM 85 CA HIS D 806 -52.028-220.862-183.497 1.00144.72 ATOM 86 CA PRO D 807 -52.676-217.125-183.935 1.00139.78 ATOM 87 CA ALA D 808 -49.004-216.158-183.588 1.00131.88 ATOM 88 CA SER D 809 -48.243-218.057-186.790 1.00133.95 ATOM 89 CA SER D 810 -51.782-217.363-188.013 1.00141.47 ATOM 90 CA THR D 811 -52.402-221.078-188.587 1.00160.55 ATOM 91 CA LYS D 812 -55.445-223.312-188.108 1.00161.41 ATOM 92 CA VAL D 813 -55.366-227.082-188.634 1.00174.68 ATOM 93 CA ASP D 814 -57.976-229.850-188.478 1.00177.63 ATOM 94 CA LYS D 815 -57.025-233.513-188.024 1.00177.19 ATOM 95 CA LYS D 816 -59.408-236.458-188.417 1.00178.17 ATOM 96 CA ILE D 817 -58.747-239.446-186.151 1.00179.64 ATOM 97 CA GLU D 818 -58.248-242.535-188.316 1.00171.33 ATOM 98 CA SER D 819 -57.442-246.208-187.683 1.00160.59 TER