HEADER RIBOSOME 16-JUN-15 3JAJ TITLE Structure of the engaged state of the mammalian SRP-ribosome complex COMPND MOL_ID: 43; COMPND 2 MOLECULE: Ribosomal protein eL41; COMPND 3 CHAIN: n; COMPND 4 FRAGMENT: SEE REMARK ; EXPDTA ELECTRON MICROSCOPY DBREF 3JAJ n 2 24 PDB 3JAJ 3JAJ 2 24 SEQRES 1 n 23 ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU LYS SEQRES 2 n 23 ARG LYS ARG ARG LYS MET ARG GLN ARG SER ATOM 1 N ARG n 2 242.240 309.064 290.335 1.00102.40 ATOM 2 CA ARG n 2 242.274 309.864 291.600 1.00110.56 ATOM 3 C ARG n 2 243.436 310.889 291.525 1.00109.98 ATOM 4 O ARG n 2 244.344 310.761 290.698 1.00102.09 ATOM 5 CB ARG n 2 242.362 308.927 292.861 1.00118.40 ATOM 6 CG ARG n 2 241.880 309.518 294.209 1.00121.07 ATOM 7 CD ARG n 2 242.452 308.835 295.462 1.00125.43 ATOM 8 NE ARG n 2 241.430 308.249 296.346 1.00138.56 ATOM 9 CZ ARG n 2 241.545 308.062 297.674 1.00156.77 ATOM 10 NH1 ARG n 2 240.523 307.527 298.346 1.00158.56 ATOM 11 NH2 ARG n 2 242.650 308.402 298.358 1.00157.65 ATOM 12 N ALA n 3 243.354 311.925 292.363 1.00113.41 ATOM 13 CA ALA n 3 244.467 312.844 292.635 1.00105.39 ATOM 14 C ALA n 3 245.619 312.131 293.361 1.00 99.35 ATOM 15 O ALA n 3 246.703 311.989 292.785 1.00 86.36 ATOM 16 CB ALA n 3 243.973 314.031 293.461 1.00107.22 ATOM 17 N LYS n 4 245.357 311.655 294.595 1.00101.92 ATOM 18 CA LYS n 4 246.373 310.988 295.465 1.00101.94 ATOM 19 C LYS n 4 247.216 309.958 294.676 1.00 96.19 ATOM 20 O LYS n 4 248.422 309.904 294.894 1.00 96.79 ATOM 21 CB LYS n 4 245.746 310.360 296.779 1.00108.49 ATOM 22 CG LYS n 4 246.714 310.131 297.994 1.00113.96 ATOM 23 CD LYS n 4 246.083 309.871 299.413 1.00108.58 ATOM 24 CE LYS n 4 247.081 310.113 300.591 1.00 99.01 ATOM 25 NZ LYS n 4 246.607 310.010 302.013 1.00 87.83 ATOM 26 N TRP n 5 246.607 309.188 293.751 1.00 94.65 ATOM 27 CA TRP n 5 247.334 308.153 292.952 1.00 93.61 ATOM 28 C TRP n 5 247.906 308.630 291.604 1.00 85.10 ATOM 29 O TRP n 5 248.301 307.789 290.788 1.00 84.99 ATOM 30 CB TRP n 5 246.518 306.848 292.714 1.00 98.41 ATOM 31 CG TRP n 5 245.753 306.293 293.894 1.00110.76 ATOM 32 CD1 TRP n 5 244.497 305.772 293.853 1.00111.69 ATOM 33 CD2 TRP n 5 246.173 306.224 295.279 1.00132.05 ATOM 34 NE1 TRP n 5 244.101 305.387 295.110 1.00127.81 ATOM 35 CE2 TRP n 5 245.106 305.651 296.005 1.00140.94 ATOM 36 CE3 TRP n 5 247.341 306.597 295.975 1.00146.32 ATOM 37 CZ2 TRP n 5 245.166 305.436 297.402 1.00158.41 ATOM 38 CZ3 TRP n 5 247.401 306.381 297.374 1.00154.67 ATOM 39 CH2 TRP n 5 246.318 305.806 298.063 1.00159.16 ATOM 40 N ARG n 6 247.955 309.938 291.348 1.00 81.47 ATOM 41 CA ARG n 6 248.820 310.464 290.270 1.00 83.10 ATOM 42 C ARG n 6 249.992 311.334 290.787 1.00 79.46 ATOM 43 O ARG n 6 251.074 311.332 290.203 1.00 77.12 ATOM 44 CB ARG n 6 247.993 311.224 289.246 1.00 90.39 ATOM 45 CG ARG n 6 248.804 311.794 288.084 1.00 94.10 ATOM 46 CD ARG n 6 247.968 312.045 286.829 1.00101.57 ATOM 47 NE ARG n 6 246.559 312.363 287.104 1.00110.53 ATOM 48 CZ ARG n 6 246.089 313.526 287.568 1.00116.95 ATOM 49 NH1 ARG n 6 246.900 314.549 287.835 1.00120.35 ATOM 50 NH2 ARG n 6 244.780 313.666 287.779 1.00121.66 ATOM 51 N LYS n 7 249.764 312.079 291.869 1.00 78.62 ATOM 52 CA LYS n 7 250.836 312.708 292.665 1.00 75.31 ATOM 53 C LYS n 7 251.814 311.593 293.105 1.00 77.17 ATOM 54 O LYS n 7 253.016 311.830 293.201 1.00 79.70 ATOM 55 CB LYS n 7 250.207 313.436 293.883 1.00 78.53 ATOM 56 CG LYS n 7 250.936 314.615 294.539 1.00 79.09 ATOM 57 CD LYS n 7 250.457 314.845 296.004 1.00 83.10 ATOM 58 CE LYS n 7 248.947 315.160 296.213 1.00 79.38 ATOM 59 NZ LYS n 7 248.394 315.021 297.610 1.00 71.55 ATOM 60 N LYS n 8 251.284 310.385 293.355 1.00 83.33 ATOM 61 CA LYS n 8 252.076 309.175 293.700 1.00 87.88 ATOM 62 C LYS n 8 252.659 308.458 292.477 1.00 80.80 ATOM 63 O LYS n 8 253.621 307.711 292.609 1.00 82.05 ATOM 64 CB LYS n 8 251.225 308.168 294.512 1.00 93.30 ATOM 65 CG LYS n 8 251.980 307.321 295.541 1.00 95.99 ATOM 66 CD LYS n 8 251.726 305.821 295.418 1.00 95.25 ATOM 67 CE LYS n 8 251.438 305.164 296.772 1.00102.28 ATOM 68 NZ LYS n 8 252.486 305.333 297.824 1.00103.89 ATOM 69 N ARG n 9 252.046 308.637 291.310 1.00 79.52 ATOM 70 CA ARG n 9 252.665 308.255 290.026 1.00 84.43 ATOM 71 C ARG n 9 253.954 309.021 289.729 1.00 85.42 ATOM 72 O ARG n 9 255.006 308.422 289.501 1.00 88.32 ATOM 73 CB ARG n 9 251.689 308.495 288.867 1.00 88.35 ATOM 74 CG ARG n 9 252.271 308.370 287.456 1.00 87.98 ATOM 75 CD ARG n 9 252.290 306.932 286.958 1.00 92.15 ATOM 76 NE ARG n 9 251.183 306.635 286.032 1.00 95.13 ATOM 77 CZ ARG n 9 249.992 306.111 286.354 1.00101.36 ATOM 78 NH1 ARG n 9 249.663 305.799 287.615 1.00110.84 ATOM 79 NH2 ARG n 9 249.099 305.895 285.391 1.00 98.05 ATOM 80 N MET n 10 253.843 310.344 289.693 1.00 86.86 ATOM 81 CA MET n 10 254.984 311.235 289.428 1.00 84.39 ATOM 82 C MET n 10 256.113 311.144 290.466 1.00 81.61 ATOM 83 O MET n 10 257.279 311.159 290.093 1.00 78.44 ATOM 84 CB MET n 10 254.503 312.684 289.359 1.00 90.87 ATOM 85 CG MET n 10 253.984 313.115 288.001 1.00 92.58 ATOM 86 SD MET n 10 255.270 313.914 287.020 1.00 99.66 ATOM 87 CE MET n 10 255.462 315.515 287.836 1.00 97.08 ATOM 88 N ARG n 11 255.770 311.063 291.754 1.00 84.83 ATOM 89 CA ARG n 11 256.776 310.879 292.818 1.00 87.23 ATOM 90 C ARG n 11 257.448 309.466 292.790 1.00 92.03 ATOM 91 O ARG n 11 258.415 309.244 293.531 1.00 96.62 ATOM 92 CB ARG n 11 256.195 311.244 294.216 1.00 86.54 ATOM 93 CG ARG n 11 255.960 312.753 294.419 1.00 85.79 ATOM 94 CD ARG n 11 255.528 313.160 295.839 1.00 84.66 ATOM 95 NE ARG n 11 254.195 312.654 296.189 1.00 83.24 ATOM 96 CZ ARG n 11 253.750 312.379 297.423 1.00 83.57 ATOM 97 NH1 ARG n 11 254.512 312.542 298.504 1.00 87.77 ATOM 98 NH2 ARG n 11 252.514 311.909 297.584 1.00 81.40 ATOM 99 N ARG n 12 256.929 308.531 291.963 1.00 91.46 ATOM 100 CA ARG n 12 257.638 307.275 291.539 1.00 89.87 ATOM 101 C ARG n 12 258.415 307.444 290.229 1.00 80.40 ATOM 102 O ARG n 12 259.506 306.904 290.068 1.00 79.66 ATOM 103 CB ARG n 12 256.663 306.083 291.356 1.00 94.52 ATOM 104 CG ARG n 12 256.514 305.179 292.574 1.00101.73 ATOM 105 CD ARG n 12 255.326 304.220 292.469 1.00107.69 ATOM 106 NE ARG n 12 254.858 303.817 293.806 1.00118.62 ATOM 107 CZ ARG n 12 253.664 303.285 294.101 1.00124.19 ATOM 108 NH1 ARG n 12 252.744 303.066 293.163 1.00128.82 ATOM 109 NH2 ARG n 12 253.377 302.978 295.368 1.00124.88 ATOM 110 N LEU n 13 257.822 308.169 289.291 1.00 77.24 ATOM 111 CA LEU n 13 258.410 308.400 287.969 1.00 77.77 ATOM 112 C LEU n 13 259.639 309.318 287.987 1.00 75.05 ATOM 113 O LEU n 13 260.618 309.035 287.308 1.00 73.03 ATOM 114 CB LEU n 13 257.330 308.973 287.028 1.00 82.98 ATOM 115 CG LEU n 13 257.552 309.247 285.523 1.00 79.78 ATOM 116 CD1 LEU n 13 258.178 310.610 285.264 1.00 78.46 ATOM 117 CD2 LEU n 13 258.351 308.147 284.836 1.00 78.11 ATOM 118 N LYS n 14 259.576 310.422 288.733 1.00 77.76 ATOM 119 CA LYS n 14 260.723 311.334 288.885 1.00 78.45 ATOM 120 C LYS n 14 261.886 310.610 289.527 1.00 76.17 ATOM 121 O LYS n 14 263.027 310.774 289.113 1.00 79.65 ATOM 122 CB LYS n 14 260.383 312.538 289.764 1.00 86.81 ATOM 123 CG LYS n 14 259.432 313.546 289.148 1.00 95.17 ATOM 124 CD LYS n 14 258.931 314.552 290.183 1.00102.50 ATOM 125 CE LYS n 14 260.027 315.503 290.641 1.00104.35 ATOM 126 NZ LYS n 14 259.462 316.726 291.274 1.00107.82 ATOM 127 N ARG n 15 261.584 309.809 290.539 1.00 78.53 ATOM 128 CA ARG n 15 262.579 308.995 291.227 1.00 82.29 ATOM 129 C ARG n 15 263.315 308.045 290.260 1.00 83.57 ATOM 130 O ARG n 15 264.470 307.701 290.504 1.00 83.53 ATOM 131 CB ARG n 15 261.902 308.249 292.390 1.00 87.15 ATOM 132 CG ARG n 15 262.821 307.472 293.316 1.00 90.44 ATOM 133 CD ARG n 15 262.644 305.975 293.150 1.00 92.93 ATOM 134 NE ARG n 15 261.383 305.488 293.721 1.00 98.71 ATOM 135 CZ ARG n 15 261.152 305.266 295.020 1.00108.52 ATOM 136 NH1 ARG n 15 262.088 305.501 295.945 1.00114.62 ATOM 137 NH2 ARG n 15 259.961 304.808 295.408 1.00110.15 ATOM 138 N LYS n 16 262.657 307.645 289.167 1.00 89.98 ATOM 139 CA LYS n 16 263.326 306.936 288.049 1.00 94.47 ATOM 140 C LYS n 16 264.231 307.806 287.170 1.00 88.20 ATOM 141 O LYS n 16 265.185 307.292 286.604 1.00 88.47 ATOM 142 CB LYS n 16 262.323 306.221 287.126 1.00105.32 ATOM 143 CG LYS n 16 262.000 304.778 287.506 1.00115.18 ATOM 144 CD LYS n 16 261.737 303.913 286.277 1.00123.06 ATOM 145 CE LYS n 16 260.590 304.430 285.415 1.00130.45 ATOM 146 NZ LYS n 16 259.289 304.426 286.145 1.00136.95 ATOM 147 N ARG n 17 263.913 309.091 287.019 1.00 88.40 ATOM 148 CA ARG n 17 264.790 310.041 286.305 1.00 87.93 ATOM 149 C ARG n 17 266.002 310.485 287.119 1.00 90.95 ATOM 150 O ARG n 17 267.037 310.756 286.531 1.00 92.82 ATOM 151 CB ARG n 17 264.031 311.283 285.866 1.00 90.92 ATOM 152 CG ARG n 17 262.926 310.992 284.877 1.00 97.34 ATOM 153 CD ARG n 17 261.892 312.100 284.864 1.00 98.45 ATOM 154 NE ARG n 17 260.871 311.838 283.855 1.00 98.25 ATOM 155 CZ ARG n 17 260.037 312.746 283.357 1.00101.01 ATOM 156 NH1 ARG n 17 260.069 314.014 283.771 1.00105.55 ATOM 157 NH2 ARG n 17 259.154 312.382 282.429 1.00102.31 ATOM 158 N ARG n 18 265.873 310.605 288.447 1.00 97.31 ATOM 159 CA ARG n 18 267.053 310.729 289.338 1.00 98.42 ATOM 160 C ARG n 18 267.996 309.565 289.039 1.00102.26 ATOM 161 O ARG n 18 269.141 309.770 288.637 1.00106.70 ATOM 162 CB ARG n 18 266.665 310.700 290.837 1.00 99.20 ATOM 163 CG ARG n 18 266.382 312.058 291.466 1.00102.38 ATOM 164 CD ARG n 18 265.126 312.085 292.340 1.00107.77 ATOM 165 NE ARG n 18 264.268 313.177 291.876 1.00119.47 ATOM 166 CZ ARG n 18 264.331 314.453 292.272 1.00130.75 ATOM 167 NH1 ARG n 18 265.186 314.858 293.212 1.00137.41 ATOM 168 NH2 ARG n 18 263.502 315.343 291.727 1.00136.02 ATOM 169 N LYS n 19 267.473 308.349 289.205 1.00103.61 ATOM 170 CA LYS n 19 268.227 307.100 289.024 1.00103.25 ATOM 171 C LYS n 19 268.845 306.990 287.617 1.00 97.06 ATOM 172 O LYS n 19 270.023 306.672 287.480 1.00 92.95 ATOM 173 CB LYS n 19 267.299 305.908 289.313 1.00110.97 ATOM 174 CG LYS n 19 267.973 304.552 289.481 1.00119.27 ATOM 175 CD LYS n 19 268.647 304.383 290.837 1.00121.15 ATOM 176 CE LYS n 19 269.103 302.942 291.055 1.00121.48 ATOM 177 NZ LYS n 19 267.988 302.029 291.441 1.00121.74 ATOM 178 N MET n 20 268.044 307.260 286.588 1.00101.01 ATOM 179 CA MET n 20 268.521 307.272 285.188 1.00106.39 ATOM 180 C MET n 20 269.606 308.309 284.948 1.00 99.00 ATOM 181 O MET n 20 270.590 308.036 284.269 1.00101.68 ATOM 182 CB MET n 20 267.369 307.560 284.201 1.00120.82 ATOM 183 CG MET n 20 266.734 306.335 283.553 1.00128.20 ATOM 184 SD MET n 20 267.451 305.943 281.941 1.00128.99 ATOM 185 CE MET n 20 266.627 304.382 281.614 1.00134.80 ATOM 186 N ARG n 21 269.390 309.508 285.474 1.00 98.41 ATOM 187 CA ARG n 21 270.316 310.630 285.299 1.00101.77 ATOM 188 C ARG n 21 271.646 310.390 285.978 1.00100.00 ATOM 189 O ARG n 21 272.698 310.573 285.368 1.00101.77 ATOM 190 CB ARG n 21 269.710 311.903 285.896 1.00107.55 ATOM 191 CG ARG n 21 270.610 313.136 285.927 1.00108.62 ATOM 192 CD ARG n 21 270.255 314.162 284.869 1.00110.98 ATOM 193 NE ARG n 21 270.464 315.498 285.418 1.00117.52 ATOM 194 CZ ARG n 21 269.798 316.597 285.064 1.00126.37 ATOM 195 NH1 ARG n 21 268.851 316.563 284.125 1.00133.92 ATOM 196 NH2 ARG n 21 270.085 317.755 285.661 1.00125.80 ATOM 197 N GLN n 22 271.582 310.014 287.251 1.00 97.14 ATOM 198 CA GLN n 22 272.763 309.904 288.110 1.00 94.02 ATOM 199 C GLN n 22 273.818 308.935 287.568 1.00 88.96 ATOM 200 O GLN n 22 275.004 309.132 287.833 1.00 90.33 ATOM 201 CB GLN n 22 272.335 309.524 289.534 1.00101.54 ATOM 202 CG GLN n 22 273.450 309.467 290.575 1.00107.63 ATOM 203 CD GLN n 22 273.985 308.058 290.860 1.00114.71 ATOM 204 OE1 GLN n 22 273.603 307.072 290.219 1.00114.58 ATOM 205 NE2 GLN n 22 274.884 307.966 291.840 1.00118.05 ATOM 206 N ARG n 23 273.395 307.907 286.817 1.00 85.49 ATOM 207 CA ARG n 23 274.327 307.052 286.035 1.00 83.69 ATOM 208 C ARG n 23 275.322 307.869 285.210 1.00 84.97 ATOM 209 O ARG n 23 276.500 307.519 285.118 1.00 84.78 ATOM 210 CB ARG n 23 273.580 306.092 285.085 1.00 81.68 ATOM 211 CG ARG n 23 273.275 304.715 285.668 1.00 82.81 ATOM 212 CD ARG n 23 273.581 303.569 284.702 1.00 83.47 ATOM 213 NE ARG n 23 272.480 303.313 283.771 1.00 82.43 ATOM 214 CZ ARG n 23 272.278 302.175 283.101 1.00 81.25 ATOM 215 NH1 ARG n 23 271.221 302.073 282.296 1.00 81.24 ATOM 216 NH2 ARG n 23 273.103 301.133 283.225 1.00 81.39 ATOM 217 N SER n 24 274.822 308.953 284.617 1.00 88.26 ATOM 218 CA SER n 24 275.609 309.864 283.793 1.00 89.31 ATOM 219 C SER n 24 275.545 311.312 284.310 1.00 82.71 ATOM 220 O SER n 24 276.324 311.719 285.175 1.00 75.47 ATOM 221 CB SER n 24 275.081 309.786 282.360 1.00 92.95 ATOM 222 OG SER n 24 275.038 308.434 281.914 1.00 91.55 TER