HEADER TRANSLATION 18-JUN-15 3JAQ TITLE Structure of a partial yeast 48S preinitiation complex in open TITLE 2 conformation COMPND MOL_ID: 37; COMPND 2 MOLECULE: eL41; COMPND 3 CHAIN: h; EXPDTA ELECTRON MICROSCOPY DBREF 3JAQ h 1 25 UNP P0CX86 RL41A_YEAST 1 25 MODRES 3JAQ 1MG 9 G 1N-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ 2MG 10 G 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ H2U 16 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3JAQ M2G 25 G N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ T6A 36 A MODRES 3JAQ 7MG 45 G MODRES 3JAQ H2U 46 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 5MC 47 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 5MC 48 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 1MA 57 A MODRES 3JAQ RIA 63 A SEQRES 1 h 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 h 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET h 1 210.737 179.833 203.862 1.00 50.00 ATOM 2 CA MET h 1 211.993 179.312 204.476 1.00 50.00 ATOM 3 C MET h 1 212.309 180.044 205.779 1.00 50.00 ATOM 4 O MET h 1 212.195 181.273 205.854 1.00 50.00 ATOM 5 CB MET h 1 213.164 179.444 203.494 1.00 50.00 ATOM 6 CG MET h 1 214.365 178.564 203.816 1.00 50.00 ATOM 7 SD MET h 1 215.674 178.625 202.579 1.00 50.00 ATOM 8 CE MET h 1 216.784 177.363 203.199 1.00 50.00 ATOM 9 N ARG h 2 212.697 179.275 206.797 1.00 50.00 ATOM 10 CA ARG h 2 213.162 179.824 208.072 1.00 50.00 ATOM 11 C ARG h 2 214.543 180.456 207.925 1.00 50.00 ATOM 12 O ARG h 2 215.408 179.922 207.219 1.00 50.00 ATOM 13 CB ARG h 2 213.220 178.740 209.147 1.00 50.00 ATOM 14 CG ARG h 2 211.910 178.461 209.865 1.00 50.00 ATOM 15 CD ARG h 2 212.173 177.669 211.138 1.00 50.00 ATOM 16 NE ARG h 2 212.643 178.522 212.233 1.00 50.00 ATOM 17 CZ ARG h 2 212.175 178.495 213.481 1.00 50.00 ATOM 18 NH1 ARG h 2 211.224 177.638 213.835 1.00 50.00 ATOM 19 NH2 ARG h 2 212.673 179.325 214.387 1.00 50.00 ATOM 20 N ALA h 3 214.735 181.589 208.596 1.00 50.00 ATOM 21 CA ALA h 3 216.019 182.292 208.606 1.00 50.00 ATOM 22 C ALA h 3 217.003 181.713 209.630 1.00 50.00 ATOM 23 O ALA h 3 218.209 181.966 209.540 1.00 50.00 ATOM 24 CB ALA h 3 215.811 183.783 208.835 1.00 50.00 ATOM 25 N LYS h 4 216.483 180.941 210.589 1.00 50.00 ATOM 26 CA LYS h 4 217.303 180.265 211.604 1.00 50.00 ATOM 27 C LYS h 4 218.170 179.163 210.990 1.00 50.00 ATOM 28 O LYS h 4 219.345 179.027 211.346 1.00 50.00 ATOM 29 CB LYS h 4 216.434 179.688 212.728 1.00 50.00 ATOM 30 CG LYS h 4 217.203 179.396 214.014 1.00 50.00 ATOM 31 CD LYS h 4 216.801 178.069 214.646 1.00 50.00 ATOM 32 CE LYS h 4 215.656 178.216 215.635 1.00 50.00 ATOM 33 NZ LYS h 4 215.332 176.928 216.308 1.00 50.00 ATOM 34 N TRP h 5 217.582 178.383 210.079 1.00 50.00 ATOM 35 CA TRP h 5 218.309 177.346 209.341 1.00 50.00 ATOM 36 C TRP h 5 219.265 177.957 208.318 1.00 50.00 ATOM 37 O TRP h 5 220.350 177.419 208.078 1.00 50.00 ATOM 38 CB TRP h 5 217.353 176.377 208.632 1.00 50.00 ATOM 39 CG TRP h 5 216.191 175.824 209.446 1.00 50.00 ATOM 40 CD1 TRP h 5 214.907 175.665 209.010 1.00 50.00 ATOM 41 CD2 TRP h 5 216.209 175.348 210.806 1.00 50.00 ATOM 42 NE1 TRP h 5 214.124 175.130 210.001 1.00 50.00 ATOM 43 CE2 TRP h 5 214.892 174.926 211.116 1.00 50.00 ATOM 44 CE3 TRP h 5 217.205 175.240 211.793 1.00 50.00 ATOM 45 CZ2 TRP h 5 214.541 174.405 212.371 1.00 50.00 ATOM 46 CZ3 TRP h 5 216.855 174.721 213.045 1.00 50.00 ATOM 47 CH2 TRP h 5 215.532 174.312 213.320 1.00 50.00 ATOM 48 N ARG h 6 218.838 179.074 207.722 1.00 50.00 ATOM 49 CA ARG h 6 219.640 179.842 206.764 1.00 50.00 ATOM 50 C ARG h 6 220.905 180.423 207.395 1.00 50.00 ATOM 51 O ARG h 6 221.969 180.406 206.774 1.00 50.00 ATOM 52 CB ARG h 6 218.802 180.962 206.144 1.00 50.00 ATOM 53 CG ARG h 6 217.972 180.540 204.941 1.00 50.00 ATOM 54 CD ARG h 6 217.406 181.747 204.206 1.00 50.00 ATOM 55 NE ARG h 6 218.463 182.631 203.710 1.00 50.00 ATOM 56 CZ ARG h 6 218.290 183.888 203.307 1.00 50.00 ATOM 57 NH1 ARG h 6 217.089 184.458 203.324 1.00 50.00 ATOM 58 NH2 ARG h 6 219.336 184.584 202.885 1.00 50.00 ATOM 59 N LYS h 7 220.773 180.934 208.622 1.00 50.00 ATOM 60 CA LYS h 7 221.903 181.447 209.402 1.00 50.00 ATOM 61 C LYS h 7 222.842 180.313 209.825 1.00 50.00 ATOM 62 O LYS h 7 224.062 180.492 209.852 1.00 50.00 ATOM 63 CB LYS h 7 221.403 182.213 210.634 1.00 50.00 ATOM 64 CG LYS h 7 222.445 183.101 211.301 1.00 50.00 ATOM 65 CD LYS h 7 221.992 183.548 212.681 1.00 50.00 ATOM 66 CE LYS h 7 223.088 184.319 213.400 1.00 50.00 ATOM 67 NZ LYS h 7 222.689 184.689 214.786 1.00 50.00 ATOM 68 N LYS h 8 222.258 179.155 210.138 1.00 50.00 ATOM 69 CA LYS h 8 222.993 177.974 210.598 1.00 50.00 ATOM 70 C LYS h 8 223.887 177.369 209.512 1.00 50.00 ATOM 71 O LYS h 8 225.025 176.979 209.792 1.00 50.00 ATOM 72 CB LYS h 8 222.017 176.923 211.135 1.00 50.00 ATOM 73 CG LYS h 8 222.610 175.984 212.175 1.00 50.00 ATOM 74 CD LYS h 8 221.552 175.080 212.793 1.00 50.00 ATOM 75 CE LYS h 8 220.955 175.658 214.073 1.00 50.00 ATOM 76 NZ LYS h 8 219.930 176.711 213.824 1.00 50.00 ATOM 77 N ARG h 9 223.368 177.297 208.285 1.00 50.00 ATOM 78 CA ARG h 9 224.118 176.754 207.145 1.00 50.00 ATOM 79 C ARG h 9 225.190 177.714 206.609 1.00 50.00 ATOM 80 O ARG h 9 226.207 177.266 206.073 1.00 50.00 ATOM 81 CB ARG h 9 223.180 176.266 206.026 1.00 50.00 ATOM 82 CG ARG h 9 222.355 177.338 205.319 1.00 50.00 ATOM 83 CD ARG h 9 221.564 176.764 204.151 1.00 50.00 ATOM 84 NE ARG h 9 222.428 176.316 203.054 1.00 50.00 ATOM 85 CZ ARG h 9 222.001 175.785 201.909 1.00 50.00 ATOM 86 NH1 ARG h 9 220.704 175.620 201.669 1.00 50.00 ATOM 87 NH2 ARG h 9 222.884 175.415 200.989 1.00 50.00 ATOM 88 N THR h 10 224.952 179.020 206.760 1.00 50.00 ATOM 89 CA THR h 10 225.907 180.061 206.357 1.00 50.00 ATOM 90 C THR h 10 227.113 180.089 207.308 1.00 50.00 ATOM 91 O THR h 10 228.252 180.254 206.858 1.00 50.00 ATOM 92 CB THR h 10 225.239 181.456 206.257 1.00 50.00 ATOM 93 OG1 THR h 10 224.017 181.354 205.514 1.00 50.00 ATOM 94 CG2 THR h 10 226.150 182.462 205.553 1.00 50.00 ATOM 95 N ARG h 11 226.852 179.921 208.608 1.00 50.00 ATOM 96 CA ARG h 11 227.909 179.793 209.622 1.00 50.00 ATOM 97 C ARG h 11 228.721 178.510 209.424 1.00 50.00 ATOM 98 O ARG h 11 229.943 178.517 209.599 1.00 50.00 ATOM 99 CB ARG h 11 227.339 179.863 211.047 1.00 50.00 ATOM 100 CG ARG h 11 226.859 181.249 211.466 1.00 50.00 ATOM 101 CD ARG h 11 226.861 181.456 212.977 1.00 50.00 ATOM 102 NE ARG h 11 225.885 180.626 213.689 1.00 50.00 ATOM 103 CZ ARG h 11 226.186 179.584 214.465 1.00 50.00 ATOM 104 NH1 ARG h 11 227.448 179.211 214.655 1.00 50.00 ATOM 105 NH2 ARG h 11 225.213 178.906 215.060 1.00 50.00 ATOM 106 N ARG h 12 228.034 177.428 209.047 1.00 50.00 ATOM 107 CA ARG h 12 228.669 176.159 208.667 1.00 50.00 ATOM 108 C ARG h 12 229.559 176.295 207.426 1.00 50.00 ATOM 109 O ARG h 12 230.611 175.651 207.342 1.00 50.00 ATOM 110 CB ARG h 12 227.619 175.066 208.443 1.00 50.00 ATOM 111 CG ARG h 12 227.195 174.335 209.706 1.00 50.00 ATOM 112 CD ARG h 12 226.417 173.072 209.367 1.00 50.00 ATOM 113 NE ARG h 12 226.206 172.221 210.540 1.00 50.00 ATOM 114 CZ ARG h 12 225.108 172.214 211.295 1.00 50.00 ATOM 115 NH1 ARG h 12 224.082 173.014 211.023 1.00 50.00 ATOM 116 NH2 ARG h 12 225.034 171.394 212.335 1.00 50.00 ATOM 117 N LEU h 13 229.128 177.127 206.475 1.00 50.00 ATOM 118 CA LEU h 13 229.927 177.465 205.294 1.00 50.00 ATOM 119 C LEU h 13 231.107 178.375 205.636 1.00 50.00 ATOM 120 O LEU h 13 232.180 178.249 205.041 1.00 50.00 ATOM 121 CB LEU h 13 229.058 178.109 204.205 1.00 50.00 ATOM 122 CG LEU h 13 228.185 177.200 203.331 1.00 50.00 ATOM 123 CD1 LEU h 13 227.115 178.014 202.619 1.00 50.00 ATOM 124 CD2 LEU h 13 229.012 176.405 202.328 1.00 50.00 ATOM 125 N LYS h 14 230.893 179.283 206.592 1.00 50.00 ATOM 126 CA LYS h 14 231.926 180.207 207.072 1.00 50.00 ATOM 127 C LYS h 14 233.028 179.479 207.850 1.00 50.00 ATOM 128 O LYS h 14 234.199 179.854 207.759 1.00 50.00 ATOM 129 CB LYS h 14 231.299 181.310 207.932 1.00 50.00 ATOM 130 CG LYS h 14 232.105 182.599 208.000 1.00 50.00 ATOM 131 CD LYS h 14 231.337 183.687 208.733 1.00 50.00 ATOM 132 CE LYS h 14 232.093 185.007 208.726 1.00 50.00 ATOM 133 NZ LYS h 14 231.325 186.091 209.400 1.00 50.00 ATOM 134 N ARG h 15 232.638 178.446 208.603 1.00 50.00 ATOM 135 CA ARG h 15 233.570 177.595 209.354 1.00 50.00 ATOM 136 C ARG h 15 234.439 176.744 208.421 1.00 50.00 ATOM 137 O ARG h 15 235.626 176.539 208.693 1.00 50.00 ATOM 138 CB ARG h 15 232.809 176.698 210.338 1.00 50.00 ATOM 139 CG ARG h 15 233.660 176.129 211.468 1.00 50.00 ATOM 140 CD ARG h 15 232.988 174.946 212.152 1.00 50.00 ATOM 141 NE ARG h 15 231.889 175.348 213.035 1.00 50.00 ATOM 142 CZ ARG h 15 231.156 174.516 213.775 1.00 50.00 ATOM 143 NH1 ARG h 15 231.383 173.205 213.764 1.00 50.00 ATOM 144 NH2 ARG h 15 230.184 175.000 214.537 1.00 50.00 ATOM 145 N LYS h 16 233.834 176.255 207.334 1.00 50.00 ATOM 146 CA LYS h 16 234.537 175.486 206.299 1.00 50.00 ATOM 147 C LYS h 16 235.529 176.346 205.515 1.00 50.00 ATOM 148 O LYS h 16 236.605 175.870 205.145 1.00 50.00 ATOM 149 CB LYS h 16 233.545 174.810 205.346 1.00 50.00 ATOM 150 CG LYS h 16 232.903 173.548 205.902 1.00 50.00 ATOM 151 CD LYS h 16 231.988 172.895 204.878 1.00 50.00 ATOM 152 CE LYS h 16 231.352 171.631 205.432 1.00 50.00 ATOM 153 NZ LYS h 16 230.442 170.989 204.443 1.00 50.00 ATOM 154 N ARG h 17 235.156 177.606 205.273 1.00 50.00 ATOM 155 CA ARG h 17 236.030 178.599 204.630 1.00 50.00 ATOM 156 C ARG h 17 237.227 178.976 205.508 1.00 50.00 ATOM 157 O ARG h 17 238.307 179.277 204.991 1.00 50.00 ATOM 158 CB ARG h 17 235.236 179.854 204.250 1.00 50.00 ATOM 159 CG ARG h 17 234.383 179.702 203.000 1.00 50.00 ATOM 160 CD ARG h 17 233.356 180.817 202.897 1.00 50.00 ATOM 161 NE ARG h 17 232.349 180.542 201.871 1.00 50.00 ATOM 162 CZ ARG h 17 231.271 181.289 201.633 1.00 50.00 ATOM 163 NH1 ARG h 17 231.026 182.384 202.347 1.00 50.00 ATOM 164 NH2 ARG h 17 230.427 180.936 200.673 1.00 50.00 ATOM 165 N ARG h 18 237.017 178.962 206.826 1.00 50.00 ATOM 166 CA ARG h 18 238.084 179.161 207.816 1.00 50.00 ATOM 167 C ARG h 18 239.063 177.984 207.841 1.00 50.00 ATOM 168 O ARG h 18 240.262 178.177 208.055 1.00 50.00 ATOM 169 CB ARG h 18 237.495 179.378 209.214 1.00 50.00 ATOM 170 CG ARG h 18 236.907 180.761 209.449 1.00 50.00 ATOM 171 CD ARG h 18 236.053 180.783 210.707 1.00 50.00 ATOM 172 NE ARG h 18 235.279 182.020 210.828 1.00 50.00 ATOM 173 CZ ARG h 18 235.660 183.101 211.508 1.00 50.00 ATOM 174 NH1 ARG h 18 236.823 183.133 212.153 1.00 50.00 ATOM 175 NH2 ARG h 18 234.868 184.165 211.544 1.00 50.00 ATOM 176 N LYS h 19 238.537 176.777 207.621 1.00 50.00 ATOM 177 CA LYS h 19 239.335 175.546 207.590 1.00 50.00 ATOM 178 C LYS h 19 240.164 175.404 206.309 1.00 50.00 ATOM 179 O LYS h 19 241.299 174.924 206.362 1.00 50.00 ATOM 180 CB LYS h 19 238.447 174.313 207.790 1.00 50.00 ATOM 181 CG LYS h 19 237.977 174.104 209.225 1.00 50.00 ATOM 182 CD LYS h 19 237.157 172.829 209.385 1.00 50.00 ATOM 183 CE LYS h 19 238.031 171.616 209.677 1.00 50.00 ATOM 184 NZ LYS h 19 237.221 170.378 209.855 1.00 50.00 ATOM 185 N VAL h 20 239.589 175.817 205.175 1.00 50.00 ATOM 186 CA VAL h 20 240.265 175.793 203.863 1.00 50.00 ATOM 187 C VAL h 20 241.468 176.752 203.844 1.00 50.00 ATOM 188 O VAL h 20 242.549 176.386 203.366 1.00 50.00 ATOM 189 CB VAL h 20 239.270 176.057 202.693 1.00 50.00 ATOM 190 CG1 VAL h 20 239.987 176.350 201.377 1.00 50.00 ATOM 191 CG2 VAL h 20 238.336 174.868 202.506 1.00 50.00 ATOM 192 N ARG h 21 241.273 177.958 204.382 1.00 50.00 ATOM 193 CA ARG h 21 242.353 178.943 204.548 1.00 50.00 ATOM 194 C ARG h 21 243.418 178.516 205.566 1.00 50.00 ATOM 195 O ARG h 21 244.581 178.905 205.441 1.00 50.00 ATOM 196 CB ARG h 21 241.792 180.327 204.905 1.00 50.00 ATOM 197 CG ARG h 21 241.673 181.286 203.725 1.00 50.00 ATOM 198 CD ARG h 21 240.324 181.200 203.020 1.00 50.00 ATOM 199 NE ARG h 21 239.273 181.916 203.747 1.00 50.00 ATOM 200 CZ ARG h 21 238.029 182.106 203.307 1.00 50.00 ATOM 201 NH1 ARG h 21 237.640 181.639 202.124 1.00 50.00 ATOM 202 NH2 ARG h 21 237.164 182.774 204.058 1.00 50.00 ATOM 203 N ALA h 22 243.011 177.725 206.562 1.00 50.00 ATOM 204 CA ALA h 22 243.935 177.124 207.534 1.00 50.00 ATOM 205 C ALA h 22 244.795 176.024 206.901 1.00 50.00 ATOM 206 O ALA h 22 245.948 175.829 207.298 1.00 50.00 ATOM 207 CB ALA h 22 243.175 176.584 208.737 1.00 50.00 ATOM 208 N ARG h 23 244.220 175.313 205.927 1.00 50.00 ATOM 209 CA ARG h 23 244.928 174.291 205.145 1.00 50.00 ATOM 210 C ARG h 23 245.915 174.909 204.149 1.00 50.00 ATOM 211 O ARG h 23 246.977 174.335 203.886 1.00 50.00 ATOM 212 CB ARG h 23 243.933 173.391 204.399 1.00 50.00 ATOM 213 CG ARG h 23 243.188 172.393 205.275 1.00 50.00 ATOM 214 CD ARG h 23 241.983 171.821 204.544 1.00 50.00 ATOM 215 NE ARG h 23 241.088 171.086 205.442 1.00 50.00 ATOM 216 CZ ARG h 23 239.894 170.598 205.105 1.00 50.00 ATOM 217 NH1 ARG h 23 239.412 170.754 203.876 1.00 50.00 ATOM 218 NH2 ARG h 23 239.173 169.948 206.008 1.00 50.00 ATOM 219 N SER h 24 245.549 176.072 203.604 1.00 50.00 ATOM 220 CA SER h 24 246.365 176.801 202.625 1.00 50.00 ATOM 221 C SER h 24 247.621 177.436 203.233 1.00 50.00 ATOM 222 O SER h 24 248.647 177.553 202.555 1.00 50.00 ATOM 223 CB SER h 24 245.525 177.870 201.919 1.00 50.00 ATOM 224 OG SER h 24 244.450 177.286 201.202 1.00 50.00 ATOM 225 N LYS h 25 247.523 177.844 204.500 1.00 50.00 ATOM 226 CA LYS h 25 248.632 178.464 205.237 1.00 50.00 ATOM 227 C LYS h 25 249.722 177.450 205.575 1.00 50.00 ATOM 228 O LYS h 25 250.751 177.382 204.902 1.00 50.00 ATOM 229 CB LYS h 25 248.126 179.132 206.520 1.00 50.00 ATOM 230 CG LYS h 25 247.428 180.468 206.311 1.00 50.00 ATOM 231 CD LYS h 25 246.759 180.945 207.591 1.00 50.00 ATOM 232 CE LYS h 25 245.956 182.214 207.357 1.00 50.00 ATOM 233 NZ LYS h 25 245.253 182.661 208.591 1.00 50.00 TER